cluster # 12946

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Oryza sativa
cluster # 12946 cluster # 12946 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12946#0 length = 2600 sequences # 6

consensus_12946#1 length = 2182 sequences # 5

consensusID : consensus_12946#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2600
fasta sequence

                              [GACTATCTTCAATTCTTCATCCCCTCTTCGCTCTCATCAACAAGCAAATCGAGAAAAAAAAAAGAAGGGGAGAAAAAATAATATAATAACAGAAAAGGAGATGAAAAAGGAGTTCCCCGGCCAAGTGCCGACGAGTCGGTTACACTCCGAGATGGACGCGGCGGCGGCCGGCGGGGGCGGGGCGGCAAAGCGGAAGCGCAGCTTCTCCGAGGACGACGCCTACCTCATCCTGCACAGGTACCAGCCGGCGACGATCCTGACGATGCTGCAGGAGATGGGGAAGCAGGTGGGCGCGGGGAAGGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGAGTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCCCGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGCTCCGGGTAATGAAGCATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATCTTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCCAAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAACAAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGATCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGAGGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAATTCTGCATAAAAATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGATCCATCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACA-TGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTC-AAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT-CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCCTTCTCTGTGATGTCTTAGACTGATATGTTCCATTTGTTAAGCTGGCCTGAGATTATCATGCCGCCTTCCTGTACAGCCTCGCCTCTTTCTCCGTTGGATAGTTTGGTTGATTGGCCAAATATTCAGAAACTATGTCATTGTGGCCTGA]

[+] EMBL AK068448             [GACTATCTTCAATTCTTCATCCCCTCTTCGCTCTCATCAACAAGCAAATCGAGAAAAAAAAAAGAAGGGGAGAAAAAATAATATAATAACAGAAAAGGAGATGAAAAAGGAGTTCCCCGGCCAAGTGCCGACGAGTCGGTTACACTCCGAGATGGACGCGGCGGCGGCCGGCGGGGGCGGGGCGGCAAAGCGGAAGCGCAGCTTCTCCGAGGACGACGCCTACCTCATCCTGCACAGGTACCAGCCGGCGACGATCCTGACGATGCTGCAGGAGATGGGGAAGCAGGTGGGCGCGGGGAAGGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGAGTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCCCGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGCTCCGGGTAATGAAGCATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATCTTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCCAAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAACAAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGATCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGAGGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAATTCTGCATAAAAATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGATCCATCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACA TGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTC AAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCCTTCTCTGTGATGTCTTAGACTGATATGTTCCATTTGTTAAGCTGGCCTGAGATTATCATGCCGCCTTCCTGTACAGCCTCGCCTCTTTCTCCGTTGGATAGTTTGGTTGATTGGCCAAATATTCAGAAACTATGTCATTGTGGCCTGA]
[-] EMBL CB654878             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACA TGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTC AAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAAC                                                                                                                                                                                                            ]
[-] EMBL CB654877             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAGTCACAATGGAGGACTTGTTCCTTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACA TGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTC AAAGCGTTATTGGCAGCCAGAAAAAACAGTTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCTTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCGTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGCCCACGTAGATACCATCTATTCTTTGAACGGCTTTCCATTTGTAGCTCAA                                                                                                                                                                                                                         ]
[-] EMBL CB647836             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACA TGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTC AAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCC                                                                                                                                                    ]
[+] EMBL AU030381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     nGGCCNTNNCCCCCAAGGATGCAGACATTNTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAANNGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAAGCNTTATTNGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATNTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCCTTaaaaaaa                                                                                                                                           ]
[+] EMBL BI808976             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccAAGCTCCAGTTCCACAGGGTGGGATTTCTA CGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCT CAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAATCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAG TTACTTTTGAAATGTAAATA GGCCACGTAGACACCAT TATTC TTGCCCTCC TTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAAACTGGATACACCGTTTAAaaaa                                                                                                                                                          ]




>consensus_12946#0
GACTATCTTCAATTCTTCATCCCCTCTTCGCTCTCATCAACAAGCAAATCGAGAAAAAAA
AAAGAAGGGGAGAAAAAATAATATAATAACAGAAAAGGAGATGAAAAAGGAGTTCCCCGG
CCAAGTGCCGACGAGTCGGTTACACTCCGAGATGGACGCGGCGGCGGCCGGCGGGGGCGG
GGCGGCAAAGCGGAAGCGCAGCTTCTCCGAGGACGACGCCTACCTCATCCTGCACAGGTA
CCAGCCGGCGACGATCCTGACGATGCTGCAGGAGATGGGGAAGCAGGTGGGCGCGGGGAA
GGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGA
GTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCC
CGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGC
TCCGGGTAATGAAGCATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATC
TTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCC
AAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAAC
AAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGA
TCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGA
GGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAAT
TCTGCATAAAAATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGC
GCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTAT
GTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATC
GTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCC
TGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGT
GCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACC
TGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAA
TTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGC
AGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGC
TGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTC
TACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCA
ACACCTAGAATTACAAAGTACTGGTGATCCATCTCAAGTTTTGACTGCACATGCAACTGA
ACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGT
GCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAA
AATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGA
GGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGA
TGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGT
GGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAA
AAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCC
AGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGT
TGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCA
AAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAA
TGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGC
TAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTAT
AATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGT
AGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAA
GCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCCTTCTCTGT
GATGTCTTAGACTGATATGTTCCATTTGTTAAGCTGGCCTGAGATTATCATGCCGCCTTC
CTGTACAGCCTCGCCTCTTTCTCCGTTGGATAGTTTGGTTGATTGGCCAAATATTCAGAA
ACTATGTCATTGTGGCCTGA

consensusID : consensus_12946#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2182
fasta sequence

                              [GAGATGGGGAAGCAGGTGGGCGCGGGGAAGGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGAGTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCCCGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGCTCCGGGTAATGAAACATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATCTTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCCAAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAACAAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGATCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGAGGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAATTCTGCATAAATATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGGTCCATCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAA-AAAGACCAAAGCTCCAGTTCCACAGGGT-GGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCC-AACACAGCGGTGAACGGGGCTAG-CAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCCCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACCCCGTTTTAAAAAAAAAAAA]

[+] EMBL OSA428900            [GAGATGGGGAAGCAGGTGGGCGCGGGGAAGGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGAGTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCCCGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGCTCCGGGTAATGAAACATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATCTTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCCAAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAACAAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGATCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGAGGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAATTCTGCATAAATATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGGTCCATCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAA AAAGACCAAAGCTCCAGTTCCACAGGGT GGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCC AACACAGCGGTGAACGGGGCTAG CAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCCCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGATACCCCGTTTTAAAAAAAAAAAA]
[+] EMBL CB647835             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGGTCCATCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCACAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU183210             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAA AAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF322900             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAA AAAGACCAAAGCTCCAGTTCCACAGGGTNGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCC  ACAC                                                                                                                                                                                                                                                         ]
[+] EMBL BQ908061             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGACCTCCAGCAACTGCGAATAAAGACCTAAGCTCCAGTTCCACAGGGT GGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAACAATCGGGCCAAACACAGCGGTGAACGGGGCTAGCCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGTAGACACCATCTATTCTTTGCCCTCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAAACTGGATACACCGTTTAAAAAAAAAA   ]




>consensus_12946#1
GAGATGGGGAAGCAGGTGGGCGCGGGGAAGGGGATCGACTGGAGGGCGCTGGTGCGGAGG
ACGAGCACCGGGATCACCTCCGCGCGCGAGTACCAGATGCTGTGGCGCCACCTCGCCTAC
GGCCACGAGTTCGTCGAGAGCGTCGAGCCCGCCTCCCTGCCGCTGGACGATGGGAGTGAT
CTAGAATGTGAGATTGAGATTGTCCCTGCTCCGGGTAATGAAACATTAGCTGAGGCCACA
TCGTTTGCCAAGACTATTATCACCGGATCTTCACGTGAACAAACCTCTGGTCAACGTGTC
AACTCAGAAGCTGCTGCGCTAAACACTCCAAATGAAAAGATAGTGCGTGTTCCATCTGAT
AAACAGCTTGTGCCTGGTCACCGTCTAACAAACGGTACAGGTCCGGTTTCCAGCTCAAAG
CAGCCCTCCCACACAGGCTCATCTCCTGATCCTTTGGACCCTAATGGACATCCCAAAAAG
AAAAAGAAGCCTAAACCATGGTCCAGAGAGGAGGACATGGAACTAGGAGCAGGTGTACAG
AAGCATGGTGAAGGAAATTGGATGGAAATTCTGCATAAATATAAATTTGATAGTTCAAGG
ACGCATCTTCAACTTCAACAGAGATGGGCGCTTATTTGCAAGCGTCAGGGGTCAACCAAG
CCTGCTACCCCTAAAATACCCAATGTTATGTCGGAGGAACTAAAGGCAGCACAAAAAGCA
TTTTCATTGGCCATTGGGACGACCAGATCGTCTACATTAAGACCAGGAGGTGTGCCACAT
CACAATCCAATGGTTACTACTACGAATCCTGAGGTGAAATCTGTTACAGCACCTTCACCA
TTGCCGGTACCGGTGCATGTTGTTCCGGTGCCTGTTCCAGTGCAACCAGTACAAGTGCAG
TTACCACCACCTCAGTTGCATCAAGCACCTGCGCAATCTGCACCTCCACCTCCAAAAGTA
TCAAATGCTTCAAATAAGTCACGAAATAATTCTAAGAAACAAGTTGCCCAATCAATTCCT
GTGAATGGCCCTTTGTCGATACAAGAGGCAGCTCTTGCTGCTGGTGGGCGAATTGCCGAA
CCAAGTGTTGCCACCAATTTTTTAAAAGCTGCACAGTCCACAAAAGCTGTGCACATAAGA
TCTCGAGGAACAGGATCTTCAAAATCTTCTACGGGATCTAAAACACCTACTGTGGCTGGT
GAACCTGGGACACAGCTTGGCAGTGATCAACACCTAGAATTACAAAGTACTGGTGGTCCA
TCTCAAGTTTTGACTGCACATGCAACTGAACAAGTTCATAATGTTTCAGAAGTCGCTGGG
GTTAATCCTCTGGGACAATCCGCTGGAGTGCATTTATCAGAAACTAAGAAAGCACTGAAC
ACCACACCAGTGTCTGGATCTTCTGACAAAATGGAAATAGATGACAACTCTAATTATTTT
GCAGTCACAATGGAGGACTTGTTCCCTGAGGATGTGAAGCAGGAAGATGTTCAAGATCCC
AAGATTGAGGAGGCCATAGACCCCAAGGATGCAGACATGTTAGAATTTGATCGCTTTGTG
GCCCAAGGATGCTTAAATAAGGATAATGTGGATAAGAGCAAGGCTGCCAAGATTGCTCCA
GAAGCTCAAAGCGTTATTGGCAGCCAGAAAAAACAGCTGAAGACGCTGCCCACAGTTGGC
AAAAGCAACCCTGTATTTGCTGGACCTCCAGCAACTGCGAAAAAGACCAAAGCTCCAGTT
CCACAGGGTGGGATGTCTAGCGGCATAGTTGGCGTGCTGAATAGATCATTAGGAGGGAAG
GCACCTGCTCCTGCTACCACAGGCACCCAAAGTACTGTCCAGAAGCAGCAAAGCATGAGC
TCAAAGGGCAACTTGTTAGTGCCCAAGAATGTGGCGCCTGGCACCGTAACACCAGCCAAC
AACCGGGCCAACACAGCGGTGAACGGGGCTAGCAAGGTGAATCCACCAGCCAGCCAGAAG
CCAGCCTAACATGGTAAATTCCTTGCTATAATAACGCCCTAGGACTTTTGTGCGCTTAGT
TTACTTTTGAAATGTAAATAGGGCCACGTAGATACCATCTATTCTTTGCCCCCCTTTGCA
TTTGTAGCCCAATTCCTTTCTGAACCAAAGCACTGGTGAAAACATTAGGTTAGACTGGAT
ACCCCGTTTTAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12946#0      GACTATCTTCAATTCTTCATCCCCTCTTCGCTCTCATCAACAAGCAAATCGAGAAAAAAA 60
consensus_12946#1      ------------------------------------------------------------
                                                                                   

consensus_12946#0      AAAGAAGGGGAGAAAAAATAATATAATAACAGAAAAGGAGATGAAAAAGGAGTTCCCCGG 120
consensus_12946#1      ------------------------------------------------------------
                                                                                   

consensus_12946#0      CCAAGTGCCGACGAGTCGGTTACACTCCGAGATGGACGCGGCGGCGGCCGGCGGGGGCGG 180
consensus_12946#1      ------------------------------------------------------------
                                                                                   

consensus_12946#0      GGCGGCAAAGCGGAAGCGCAGCTTCTCCGAGGACGACGCCTACCTCATCCTGCACAGGTA 240
consensus_12946#1      ------------------------------------------------------------
                                                                                   

consensus_12946#0      CCAGCCGGCGACGATCCTGACGATGCTGCAGGAGATGGGGAAGCAGGTGGGCGCGGGGAA 300
consensus_12946#1      -------------------------------GAGATGGGGAAGCAGGTGGGCGCGGGGAA 29
                                                      *****************************

consensus_12946#0      GGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGA 360
consensus_12946#1      GGGGATCGACTGGAGGGCGCTGGTGCGGAGGACGAGCACCGGGATCACCTCCGCGCGCGA 89
                       ************************************************************

consensus_12946#0      GTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCC 420
consensus_12946#1      GTACCAGATGCTGTGGCGCCACCTCGCCTACGGCCACGAGTTCGTCGAGAGCGTCGAGCC 149
                       ************************************************************

consensus_12946#0      CGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGC 480
consensus_12946#1      CGCCTCCCTGCCGCTGGACGATGGGAGTGATCTAGAATGTGAGATTGAGATTGTCCCTGC 209
                       ************************************************************

consensus_12946#0      TCCGGGTAATGAAGCATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATC 540
consensus_12946#1      TCCGGGTAATGAAACATTAGCTGAGGCCACATCGTTTGCCAAGACTATTATCACCGGATC 269
                       ************* **********************************************

consensus_12946#0      TTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCC 600
consensus_12946#1      TTCACGTGAACAAACCTCTGGTCAACGTGTCAACTCAGAAGCTGCTGCGCTAAACACTCC 329
                       ************************************************************

consensus_12946#0      AAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAAC 660
consensus_12946#1      AAATGAAAAGATAGTGCGTGTTCCATCTGATAAACAGCTTGTGCCTGGTCACCGTCTAAC 389
                       ************************************************************

consensus_12946#0      AAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGA 720
consensus_12946#1      AAACGGTACAGGTCCGGTTTCCAGCTCAAAGCAGCCCTCCCACACAGGCTCATCTCCTGA 449
                       ************************************************************

consensus_12946#0      TCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGA 780
consensus_12946#1      TCCTTTGGACCCTAATGGACATCCCAAAAAGAAAAAGAAGCCTAAACCATGGTCCAGAGA 509
                       ************************************************************

consensus_12946#0      GGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAAT 840
consensus_12946#1      GGAGGACATGGAACTAGGAGCAGGTGTACAGAAGCATGGTGAAGGAAATTGGATGGAAAT 569
                       ************************************************************

consensus_12946#0      TCTGCATAAAAATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGC 900
consensus_12946#1      TCTGCATAAATATAAATTTGATAGTTCAAGGACGCATCTTCAACTTCAACAGAGATGGGC 629
                       ********** *************************************************

consensus_12946#0      GCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTAT 960
consensus_12946#1      GCTTATTTGCAAGCGTCAGGGGTCAACCAAGCCTGCTACCCCTAAAATACCCAATGTTAT 689
                       ************************************************************

consensus_12946#0      GTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATC 1020
consensus_12946#1      GTCGGAGGAACTAAAGGCAGCACAAAAAGCATTTTCATTGGCCATTGGGACGACCAGATC 749
                       ************************************************************

consensus_12946#0      GTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCC 1080
consensus_12946#1      GTCTACATTAAGACCAGGAGGTGTGCCACATCACAATCCAATGGTTACTACTACGAATCC 809
                       ************************************************************

consensus_12946#0      TGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGT 1140
consensus_12946#1      TGAGGTGAAATCTGTTACAGCACCTTCACCATTGCCGGTACCGGTGCATGTTGTTCCGGT 869
                       ************************************************************

consensus_12946#0      GCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACC 1200
consensus_12946#1      GCCTGTTCCAGTGCAACCAGTACAAGTGCAGTTACCACCACCTCAGTTGCATCAAGCACC 929
                       ************************************************************

consensus_12946#0      TGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAA 1260
consensus_12946#1      TGCGCAATCTGCACCTCCACCTCCAAAAGTATCAAATGCTTCAAATAAGTCACGAAATAA 989
                       ************************************************************

consensus_12946#0      TTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGC 1320
consensus_12946#1      TTCTAAGAAACAAGTTGCCCAATCAATTCCTGTGAATGGCCCTTTGTCGATACAAGAGGC 1049
                       ************************************************************

consensus_12946#0      AGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGC 1380
consensus_12946#1      AGCTCTTGCTGCTGGTGGGCGAATTGCCGAACCAAGTGTTGCCACCAATTTTTTAAAAGC 1109
                       ************************************************************

consensus_12946#0      TGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTC 1440
consensus_12946#1      TGCACAGTCCACAAAAGCTGTGCACATAAGATCTCGAGGAACAGGATCTTCAAAATCTTC 1169
                       ************************************************************

consensus_12946#0      TACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCA 1500
consensus_12946#1      TACGGGATCTAAAACACCTACTGTGGCTGGTGAACCTGGGACACAGCTTGGCAGTGATCA 1229
                       ************************************************************

consensus_12946#0      ACACCTAGAATTACAAAGTACTGGTGATCCATCTCAAGTTTTGACTGCACATGCAACTGA 1560
consensus_12946#1      ACACCTAGAATTACAAAGTACTGGTGGTCCATCTCAAGTTTTGACTGCACATGCAACTGA 1289
                       ************************** *********************************

consensus_12946#0      ACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGT 1620
consensus_12946#1      ACAAGTTCATAATGTTTCAGAAGTCGCTGGGGTTAATCCTCTGGGACAATCCGCTGGAGT 1349
                       ************************************************************

consensus_12946#0      GCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAA 1680
consensus_12946#1      GCATTTATCAGAAACTAAGAAAGCACTGAACACCACACCAGTGTCTGGATCTTCTGACAA 1409
                       ************************************************************

consensus_12946#0      AATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGA 1740
consensus_12946#1      AATGGAAATAGATGACAACTCTAATTATTTTGCAGTCACAATGGAGGACTTGTTCCCTGA 1469
                       ************************************************************

consensus_12946#0      GGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGA 1800
consensus_12946#1      GGATGTGAAGCAGGAAGATGTTCAAGATCCCAAGATTGAGGAGGCCATAGACCCCAAGGA 1529
                       ************************************************************

consensus_12946#0      TGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGT 1860
consensus_12946#1      TGCAGACATGTTAGAATTTGATCGCTTTGTGGCCCAAGGATGCTTAAATAAGGATAATGT 1589
                       ************************************************************

consensus_12946#0      GGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAA 1920
consensus_12946#1      GGATAAGAGCAAGGCTGCCAAGATTGCTCCAGAAGCTCAAAGCGTTATTGGCAGCCAGAA 1649
                       ************************************************************

consensus_12946#0      AAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCC 1980
consensus_12946#1      AAAACAGCTGAAGACGCTGCCCACAGTTGGCAAAAGCAACCCTGTATTTGCTGGACCTCC 1709
                       ************************************************************

consensus_12946#0      AGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGT 2040
consensus_12946#1      AGCAACTGCGAAAAAGACCAAAGCTCCAGTTCCACAGGGTGGGATGTCTAGCGGCATAGT 1769
                       ************************************************************

consensus_12946#0      TGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCA 2100
consensus_12946#1      TGGCGTGCTGAATAGATCATTAGGAGGGAAGGCACCTGCTCCTGCTACCACAGGCACCCA 1829
                       ************************************************************

consensus_12946#0      AAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAA 2160
consensus_12946#1      AAGTACTGTCCAGAAGCAGCAAAGCATGAGCTCAAAGGGCAACTTGTTAGTGCCCAAGAA 1889
                       ************************************************************

consensus_12946#0      TGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGC 2220
consensus_12946#1      TGTGGCGCCTGGCACCGTAACACCAGCCAACAACCGGGCCAACACAGCGGTGAACGGGGC 1949
                       ************************************************************

consensus_12946#0      TAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTAT 2280
consensus_12946#1      TAGCAAGGTGAATCCACCAGCCAGCCAGAAGCCAGCCTAACATGGTAAATTCCTTGCTAT 2009
                       ************************************************************

consensus_12946#0      AATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGT 2340
consensus_12946#1      AATAACGCCCTAGGACTTTTGTGCGCTTAGTTTACTTTTGAAATGTAAATAGGGCCACGT 2069
                       ************************************************************

consensus_12946#0      AGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCTCAATTCCTTTCTGAACCAAA 2400
consensus_12946#1      AGATACCATCTATTCTTTGCCCCCCTTTGCATTTGTAGCCCAATTCCTTTCTGAACCAAA 2129
                       *************************************** ********************

consensus_12946#0      GCACTGGTGAAAACATTAGGTTAGACTGGATACACCGTTTAATCGCTTTGCCTTCTCTGT 2460
consensus_12946#1      GCACTGGTGAAAACATTAGGTTAGACTGGATACCCCGTTTTAAAAAAAAAAAA------- 2182
                       ********************************* ****** *                  

consensus_12946#0      GATGTCTTAGACTGATATGTTCCATTTGTTAAGCTGGCCTGAGATTATCATGCCGCCTTC 2520
consensus_12946#1      ------------------------------------------------------------
                                                                                   

consensus_12946#0      CTGTACAGCCTCGCCTCTTTCTCCGTTGGATAGTTTGGTTGATTGGCCAAATATTCAGAA 2580
consensus_12946#1      ------------------------------------------------------------
                                                                                   

consensus_12946#0      ACTATGTCATTGTGGCCTGA 2600
consensus_12946#1      --------------------