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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1295 cluster # 1295       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1295#0 length = 346 sequences # 2  

consensusID : consensus_1295#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 346
fasta sequence
                              [TTTTTTTTTTTTAATAAGAAAAAAGCACGGTCCTTTTTCA-TTGTAAGTGGATTTTTGAACTATTCATTTTAGTCTCAAGAGAGACACTCCAAGGGGTTGTTGTGTGTAATCACCTAAACCCTCTTGAAGC---AAAAAAAAACAGAGAAGAGATTATACATATATCACAATTTTCAAAGAATAGTAAAAAAAAATGTACATTATGATGATATCGCCCATGGGAGATTAATCAATCCCTTGGAAAGAAAACCAAAATTTTTTTCTTCTTTGCAGCTAGTAGGAAATCAGCAGCTTCAAGTTGTAACCATGCATGTACAATGTACACCCTCCTCCCCTTGTCTCGTCCTCT]

[+] EMBL CA761129             [TTTTTTTTTTTTAATAAGAAAAAAGCACGGTCCTTTTTCA TTGTAAGTGGATTTTTGAACTATTCATTTTAGTCTCAAGAGAGACACTCCAAGGGGTTGTTGTGTGTAATCACCTAAACCCTCTTGAAGC   AAAAAAAAACAGAGAAGAGATTATACATATATCACAATTTTCAAAGAATAGTAAAAAAAAATGTACATTATGATGATATCGCCCATGGGAGATTAATCAATCCCTTGGAAAGAAAACCAAAATTTTTTTCTTCTTTGCAGCTAGTAGGAAATCAGCAGCTTCAAGTTGTAACCATGCATGTACAATGTACACCCTCCTCCCCTTGTCTCGTCCTCT]
[-] EMBL C73701               [                         CACGGGCCTTTTTCATTTGTAAGTGGATTTTTGAACTATTCATTTTAGTCTCAAGAGAGACACTCCGAGGGGTTGTTGTGTGTAATCACCTAAACCCTCTTGAAGCAAAAAAAAAAAACAGAGAAGAGATTATACATATATCACAATTTTCAAAGAATAGT AAAAAAAATGTACATTATGATGATATCGCCCATGGGAGATTAATCAATCCCTTGGAAAGAAAACCAAAATTTTTTCCTTCTTTGCAGCTAGTAGGAAATCAGCAGCTTCAAGTTGTAACCActcgcc                                    ]


>consensus_1295#0 TTTTTTTTTTTTAATAAGAAAAAAGCACGGTCCTTTTTCATTGTAAGTGGATTTTTGAAC TATTCATTTTAGTCTCAAGAGAGACACTCCAAGGGGTTGTTGTGTGTAATCACCTAAACC CTCTTGAAGCAAAAAAAAACAGAGAAGAGATTATACATATATCACAATTTTCAAAGAATA GTAAAAAAAAATGTACATTATGATGATATCGCCCATGGGAGATTAATCAATCCCTTGGAA AGAAAACCAAAATTTTTTTCTTCTTTGCAGCTAGTAGGAAATCAGCAGCTTCAAGTTGTA ACCATGCATGTACAATGTACACCCTCCTCCCCTTGTCTCGTCCTCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)