These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12973#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2344 fasta sequence [CTCTTCCTCTTCCTCTCTCTCGTTGATTTCTTTTCCCTTTGCCAGCTTTCGCTTTTCTTTCCTCCTCCTCCTTTCGGCCTCTCCTCTCCTTCCTCTTTTGCTTCTTCTTCTTCTCTCTCTCTACAACTCAAGCTAATAGGTGTAGTACTAGCAAAGGCCAGCATCCATATCGAGGCTATCTAGGGTTGGTGCTAGCTACCTAGCTAGGTTGGACCCTTCTCTTCATCCTCCCTTGCATATCAAGCCTCGATAGATATAGCCATCAGCCCCCCTCTCGATCGCCCTTGCCTTTTGAGATCGATCACCAGGTTACTGTAGAAGTACAGATCGGAGCGAGCGATCGATCGAGGAAGAAGAAGAGGTAGAGGTTGTAGATGGCTGTGTCGGCTGGCGGCGGCGGCGGCGCGGCGGGGCAGTTCGGCGACACGACGCTGACGAAGGTGTTCGTGGGGGGACTCGCGTGGGAGACGCAGAAGGAGGGGATGCGGGGATACTTCGAGCAGTTCGGCGATATCCTCGAGGCCGTCGTCATCACCGACAAGAACACCGGCAGATCCAAGGGCTACGGATTTGTTACATTCCGCGAGCCGGAGGCTGCTATGAAAGCTTGCTTTGATCCGTACCCGGTGATCGATGGGAGGAGGGCCAACTGCAATCTTGCATATCTTGGGGTCCAGAGATCCAAGGCAGCTGCAGCGTCTCTGCAACCTTATGCTGGGCATATGAGGGCAATGAAGTCCATTATCCAGACAGGCGGTGGTGGTGCCAGCTTGAGCATGGCAGATCATGGCATCCAGCAGGGGATCCCGACCTACAATGTGTATGGGTACTCACCTTATTTCTCGGATTACGGCTATCCGCTGAGCTACTATCAAGCGTACGGTGGGCTTGGAGCCCAGTACCAGATGTTCGCTGGTGGCGCCGCCGCCGGGGCGGCGGGGCTAACAATGGCGAATCCTACCGGCGGCGGTCTCTACTCGCCGTACTTCCAGTACGGCCCAGCGGTGGCGGCGAACGCGGCTGCTGCCGGGTACGCCGGCATGCAGTACCCTCAGATGTACCAGTACGCGGCGGCGGCGGCGGCTGTCGGAGCCCCGACGGCGGCGACGACGGCCAGCCAGCTGACCGCCGTGGCCGGGCTCCAGCAGTACGCTGGCACTGTGGCTCTTGCTCCTAACTCTACCGGCCAAGCAGCAGGCATGACAATGTCTCTGACAGCTCCAACTCTGCCGGCACCATCACCACAGTATCAGTACAGGCTCATTTCTTCTCATGTCGCTGCAGCTCCAGAGAAACCATTGGCCTAGAAAACCACGGCTGCCTTAAGTCTGCATCCATCTAAATACAGTATCTTCTTCCTCCACACACATGTGTCAGTCATATCTCATATGCATATCATCTGTCCTAGCTCTCATGAGTATACTTACTCAGCTCACATATTTACTAATTACACTCACGCGGTCACGCCAAATGTACCCACTTATGGGTTGAGTGGTGTATTTGGCATGCTAACAAAGGACTGTGGTAAGTCCAATTTTGCATTGTGTAGTCTGGTCTAGCAATTAAGGTCTTCTTAATTCTCCTTTAAGGTGAACGTTGCATTAATTTTTTACAAGAAATTCTCTCATCCAATGTGTCGTCAGTCTAGTACACGAGTAAATTAACCATCCTGCATGTATAGGTCACAGGTTAGCATCTTCAGTTAATCAGTGTGTTCATGTTAACTTAGCTTCTAGGAAAAGTTTTGTTGTGCCTTGTACCTCTTAAGGAAGAGAGTGCAGGGGAAATAATATGTGGTAGAGTCGCTGCTGATTTTTCATATGCAGCTTTAGTTCAAGATGTCTCCACAGAAGCTTGTGGGGGCTACTGAAAGAGTTCAATTAATTGTGTATTAATTTGTAGTACGTAGTCACATATTTCATTTTCACCTATACATCTTCATTTCTTTTTTTCTTGTACACTAACTAGGTCAGGGTCCCTTTCGATCCATTCTCTATTCGATCTGGTCCTTCATTTCTGGTTTTCTTCCATCTCACTCGTTATGTATCACCATCCACCCTTTCACCCATAATTAAGGCAGCAATGCATTATATATATGCATAATTAAGGTCAAGCAGGCCCAAGAAATCAGATGAAAAATTGATGGAAGCCATTACCAGACATATTATTACTCTGGAGTTCTCCAAATCTCCAATTAGTATAACGACTTGTATGGATTATTATATGTAGCTTCCTTTTGAGAAGCTAAATGTACCACGTACGCTTATCTTTCAGTACATTTACATGAACTCTGCTAAATGGCAAACTTCTACATATGCAGATCGCTGCATACCTAAAAAAAAAA] [+] EMBL CB629285 [CTCTTCCTCTTCCTCTCTCTCGTTGATTTCTTTTCCCTTTGCCAGCTTTCGCTTTTCTTTCCTCCTCCTCCTTTCGGCCTCTCCTCTCCTTCCTCTTTTGCTTCTTCTTCTTCTCTCTCTCTACAACTCAAGCTAATAGGTGTAGTACTAGCAAAGGCCAGCATCCATATCGAGGCTATCTAGGGTTGGTGCTAGCTACCTAGCTAGGTTGGACCCTTCTCTTCATCCTCCCTTGCATATCAAGCCTCGATAGATATAGCCATCAGCCCCCCTCTCGATCGCCCTTGCCTTTTGAGATCGATCACCAGGTTACTGTAGAAGTACAGATCGGAGCGAGCGATCGATCGAGGAAGAAGAAGAGGTAGAGGTTGTAGATGGCTGTGTCGGCTGGCGGCGGCGGCGGCGCGGCGGGGCAGTTCGGCGACACGACGCTGACGAAGGTGTTCGTGGGGGGACTCGCGTGGGAGACGCAGAAGGAGGGGATGCGGGGATACTTCGAGCAGTTCGGCGATATCCTCGAGGCCGTCGTCATCACCGACAAGAACACCGGCAGATCCAAGGGCTACGGATTTGTTACATTCCGCGAGCCGGAGGCTGCTATGAAAGCTTGCTTTGATCCGTACCCGGTGATCGATGGGAGGAGGGCCAACTGCAATCTTGCATATCTTGGGGTCCAGAGATCCAAGGCAGCTGCAGCGTCTCTGCAACCTTATGCTGGGCATATGA ] [+] EMBL AK072960 [ TTCGGCCTCTCCTCTCCTTCCTCTTTTGCTTCTTCTTCTTCTCTCTCTCTACAACTCAAGCTAATAGGTGTAGTACTAGCAAAGGCCAGCATCCATATCGAGGCTATCTAGGGTTGGTGCTAGCTACCTAGCTAGGTTGGACCCTTCTCTTCATCCTCCCTTGCATATCAAGCCTCGATAGATATAGCCATCAGCCCCCCTCTCGATCGCCCTTGCCTTTTGAGATCGATCACCAGGTTACTGTAGAAGTACAGATCGGAGCGAGCGATCGATCGAGGAAGAAGAAGAGGTAGAGGTTGTAGATGGCTGTGTCGGCTGGCGGCGGCGGCGGCGCGGCGGGGCAGTTCGGCGACACGACGCTGACGAAGGTGTTCGTGGGGGGACTCGCGTGGGAGACGCAGAAGGAGGGGATGCGGGGATACTTCGAGCAGTTCGGCGATATCCTCGAGGCCGTCGTCATCACCGACAAGAACACCGGCAGATCCAAGGGCTACGGATTTGTTACATTCCGCGAGCCGGAGGCTGCTATGAAAGCTTGCTTTGATCCGTACCCGGTGATCGATGGGAGGAGGGCCAACTGCAATCTTGCATATCTTGGGGTCCAGAGATCCAAGGCAGCTGCAGCGTCTCTGCAACCTTATGCTGGGCATATGAGGGCAATGAAGTCCATTATCCAGACAGGCGGTGGTGGTGCCAGCTTGAGCATGGCAGATCATGGCATCCAGCAGGGGATCCCGACCTACAATGTGTATGGGTACTCACCTTATTTCTCGGATTACGGCTATCCGCTGAGCTACTATCAAGCGTACGGTGGGCTTGGAGCCCAGTACCAGATGTTCGCTGGTGGCGCCGCCGCCGGGGCGGCGGGGCTAACAATGGCGAATCCTACCGGCGGCGGTCTCTACTCGCCGTACTTCCAGTACGGCCCAGCGGTGGCGGCGAACGCGGCTGCTGCCGGGTACGCCGGCATGCAGTACCCTCAGATGTACCAGTACGCGGCGGCGGCGGCGGCTGTCGGAGCCCCGACGGCGGCGACGACGGCCAGCCAGCTGACCGCCGTGGCCGGGCTCCAGCAGTACGCTGGCACTGTGGCTCTTGCTCCTAACTCTACCGGCCAAGCAGCAGGCATGACAATGTCTCTGACAGCTCCAACTCTGCCGGCACCATCACCACAGTATCAGTACAGGCTCATTTCTTCTCATGTCGCTGCAGCTCCAGAGAAACCATTGGCCTAGAAAACCACGGCTGCCTTAAGTCTGCATCCATCTAAATACAGTATCTTCTTCCTCCACACACATGTGTCAGTCATATCTCATATGCATATCATCTGTCCTAGCTCTCATGAGTATACTTACTCAGCTCACATATTTACTAATTACACTCACGCGGTCACGCCAAATGTACCCACTTATGGGTTGAGTGGTGTATTTGGCATGCTAACAAAGGACTGTGGTAAGTCCAATTTTGCATTGTGTAGTCTGGTCTAGCAATTAAGGTCTTCTTAATTCTCCTTTAAGGTGAACGTTGCATTAATTTTTTACAAGAAATTCTCTCATCCAATGTGTCGTCAGTCTAGTACACGAGTAAATTAACCATCCTGCATGTATAGGTCACAGGTTAGCATCTTCAGTTAATCAGTGTGTTCATGTTAACTTAGCTTCTAGGAAAAGTTTTGTTGTGCCTTGTACCTCTTAAGGAAGAGAGTGCAGGGGAAATAATATGTGGTAGAGTCGCTGCTGATTTTTCATATGCAGCTTTAGTTCAAGATGTCTCCACAGAAGCTTGTGGGGGCTACTGAAAGAGTTCAATTAATTGTGTATTAATTTGTAGTACGTAGTCACATATTTCATTTTCACCTATACATCTTCATTTCTTTTTTTCTTGTACACTAACTAGGTCAGGGTCCCTTTCGATCCATTCTCTATTCGATCTGGTCCTTCATTTCTGGTTTTCTTCCATCTCACTCGTTATGTATCACCATCCACCCTTTCACCCATAATTAAGGCAGCAATGCATTATATATATGCATAATTAAGGTCAAGCAGGCCCAAGAAATCAGATGAAAAATTGATGGAAGCCATTACCAGACATATTATTACTCTGGAGTTCTCCAAATCTCCAATTAGTATAACGACTTGTATGGATTATTATATGTAGCTTCCTTTTGAGAAGCTAAATGTACCACGTACGCTTATCTTTCAGTACATTTACATGAACTCTGCTAAATG ] [+] EMBL CB670253 [ TTCTTCTCCTTCTCTCTCTCTACAACTCAAGCTAATAGGTGTAGTACTAGCAAAGGCCAGCATCCATATCGAGGCTATCTACGGTTGGTGCTAGCTACCTAGCTAGGTTGGACCCTTCTCTTCATCCTCCCTTGCATATCAAGCCTCGATAGATATAGCCATCAGCCCCCCTCTCGATCGCCCTTGCCTTTTGAGATCGATCACCAGGTTACTGTAGAAGTACAGATCGGAGCGAGCGATCGATCGAGGAAGAAGAAGAGGTAGAGGTTGTAGATGGCTGTGTCGGCTGGCGGCGGCGGCGGCGCGGCGGGGCAGTTCGGCGACACGACGCTGACGAAGGTGTTCGTGGGGGGACTCGCGTGGGAGACGCAGAAGGAGGGGATGCGGGGATACTTCGAGCAGTTCGGCGATATCCTCGAGGCCGTCGTCATCACCGACAAGAACACCGGCAGATCCAAGGGCTACGGATTTGTTACATTCCGCGAGCCGGAGGCTGCTATGAAAGCTTGCTTTGATCCGTACCCGGTGATCGATGGGAGGAGGGCCAACTGCAATCTTGCATATCTTGGGGTCCAGAGATCCAAGGCAGCTGCAGCGTCTCTGCAACCTTATGCTGGGCATATGAGGGCAATGAAGTCCATTATCCAGACAGGCGGTGGTGGTGCCAGCTTGAGCATGGCAGATCATGGCATCCAGCAGGGGATCCCGACCTACAATGTGTATGGGTACTCACCTTATTTCTCGGATTACGGCTATCCGCTGAGCTACTA ] [+] EMBL C27216 [ AAGGCCAGCATCCATATCGAGGCTATCTAGGGTTGGTGCTAGCTACCTAGCTAGGTTGGACCCTTCTCTTCATCCTCCCTTGCATATCAAGCCTCGATAGATATAGCCATCAGCCCCCCTCTCGATCGCCCTTGCCTTTTGAGATCGATCACCAGGTTACTGTAGAAGTACAGATCGGAGCGAGCGATCGATCGAGGAAGAAGAAGAGGTAGAGGTTGTAGATGGCTGTNTCGGCT ] [+] EMBL CB677423 [ GTGGTGCCAGCTTGAGCATGGCAGATCATGGCATCCAGCAGGGGATCCCGACCTACAATGTGTATGGGTACTCACCTTATTTCTCGGATTACGGCTATCCGCTGAGCTACTATCAAGCGTACGGTGGGCTTGGAGCCCAGTACCAGATGTTCGCTGGTGGCGCCGCCGCCGGGGCGGCGGGGCTAACAATGGCGAATCCTACCGGCGGCGGTCTCTACTCGCCGTACTTCCAGTACGGCCCAGCGGTGGCGGCGAACGCGGCTGCTGCCGGGTACGCCGGCATGCAGTACCCTCAGATGTACCAGTACGCGGCGGCGGCGGCGGCTGTCGGAGCCCCGACGGCGGCGACGACGGCCAGCCAGCTGACCGCCGTGGCCGGGCTCCAGCAGTACGCTGGCACTGTGGCTCTTGCTCCTAACTCTACCGGCCAAGCAGCAGGCATGACAATGTCTCTGACAGCTCCAACTCTGCCGGCACCATCACCACAGTATCAGTACAGGCTCATTTCTTCTCATGTCGCTGCAGCTCCAGAGAAACCATTGGCCTAGAAAACCACGGCTGCCTTAAGTCTGCATCCATCTAAATACAGTATCTTCTTCCTCCACACACATGTGTCAGTCATATCTCATATGCATATCATCTGTCCTAGCTCTCATGAGTATACTTACTCAGCTCACATATTTACTAATTACACTCACGCGGTCACGCCAAATGTACCCACTTATGGGTTGAGTGGTGTATTTGGCATGCTAACAAAGGACTGTGGTAAGTCCAATTTTGCATTGTGTAGTCTGGTCTAGCAATTAAAGTCTTCTTAATTCTCCTTTAAAGTGAA ] [+] EMBL CF323395 [ CGGTCTCTACTCGCCGTACTTCCAGTACGGCCCAGCGGTGGCGGCGAACGCGGCTGCTGCCGGGTACGCCGGCATGCAGTACCCTCAGATGTACCAGTACGCGGCGGCGGCGGCGGCTGTCGGAGCCCCGACGGCGGCGACGACGGCCAGCCAGCTGACCGCCGTGGCCGGGCTCCAGCAGTACGCTGGCACTGTGGCTCTTGCTCCTAACTCTACCGGCCAAGCAGCAGGCATGACAATGTCTCTGACAGCTCCAACTCTGCCGGCACCATCACCACAGTATCAGTACAGGCTCATTTCTTCTCATGTCGCTGCAGCTCCAGAGAAACCATTGGCCTAGAAAACCACGGCTGCCTTAAGTCTGCATCCATCTAAATACAGTATCTTCTTCCTCCACACACATGTGTCAGTCATATCTCATATGCATATCATCTGTCCTAGCTCTCATGAGTATACTTACTCAGCTCACATATTTACTAATTACACTCACGCGGTCACGCCAAATGTACCCACTTATGGGTTGAGTGGTGTATTTGGCATGCTAACAAAGGACTGTGG ] [-] EMBL CB670254 [ GTGTATTTGGCATGCTAACAAAGGACTGTGGTAAGTCCAATTTTGCATTGTGTAGTCTGGTCTAGCAATTAAGGTCTTCTTAATTCTCCTTTAAGGTGAACGTTGCATTAATTTTTTACAAGAAATTCTCTCATCCAATGTGTCGTCAGTCTAGTACACGAGTAAATTAACCATCCTGCATGTATAGGTCACAGGTTAGCATCTTCAGTTAATCAGTGTGTTCATGTTAACTTAGCTTCTAGGAAAAGTTTTGTTGTGCCTTGTACCTCTTAAGGAAGAGAGTGCAGGGGAAATAATATGTGGTAGAGTCGCTGCTGATTTTTCATATGCAGCTTTAGTTCAAGATGTCTCCACAGAAGCTTGTGGGGGCTACTGAAAGAGTTCAATTAATTGTGTATTAATTTGTAGTACGTAGTCACATATTTCATTTTCACCTATACATCTTCATTTCTTTTTTTCTTGTACACTAACTAGGTCAGGGTCCCTTTCGATCCATTCTCTATTCGATCTGGTCCTTCATTTCTGGTTTTCTTCCATCTCACTCGTTATGTATCACCATCCACCCTTTCACCCATAATTAAGGCAGCAATGCATTATATATATGCATAATTAAGGTCAAGCAGGCCCAAGAAATCAGATGAAAAATTGATGGAAGCCATTACCAGACATATTATTACTCTGGAGTTCTCCAAATCTCCAATTAGTATAACGACTTGTATGGATTATTATATGTAGCTTCCTTTTGAGAAGCTAAATGTACCACGTACGCTTATCTTTCAGTACATTTACATG ] [-] EMBL CB677424 [ CCAATTTTGCATTGTGTAGTCTGGTCTAGCAATTAAGGTCTTCTTAATTCTCCTTTAAGGTGAACGTTGCATTAATTTTTTACAAGAAATTCTCTCATCCAATGTGTCGTCAGTCTAGTACACGAGTAAATTAACCATCCTGCATGTATAGGTCACAGGTTAGCATCTTCAGTTAATCAGTGTGTTCATGTTAACTTAGCTTCTAGGAAAAGTTTTGTTGTGCCTTGTACCTCTTAAGGAAGAGAGTGCAGGGGAAATAATATGTGGTAGAGTCGCTGCTGATTTTTCATATGCAGCTTTAGTTCAAGATGTCTCCACAGAAGCTTGTGGGGGCTACTGAAAGAGTTCAATTAATTGTGTATTAATTTGTAGTACGTAGTCACATATTTCATTTTCACCTATACATCTTCATTTCTTTTTTTCTTGTACACTAACTAGGTCAGGGTCCCTTTCGATCCATTCTCTATTCGATCTGGTCCTTCATTTCTGGTTTTCTTCCATCTCACTCGTTATGTATCACCATCCACCCTTTCACCCATAATTAAGGCAGCAATGCATTATATATATGCATAATTAAGGTCAAGCAGGCCCAAGAAATCAGATGAAAAATTGATGGAAGCCATTACCAGACATATTATTACTCTGGAGTTCTCCAAATCTCCAATTAGTATAACGACTTGTATGGATTATTATATGTAGCTTCCTTTTGAGAAGCTAAATGTACCACGTACGCTTATCTTTCAGTACATTTACATGAACTCTGCTAAAaaaaga ] [+] EMBL CA764116 [ TGTGGTAGAGTCGCTGCTGATTTTCCATATGCAGCTTTAGTTCAAGATGTCCCCACAGAAGCTTGTGGGGGCTACTTAAAGAGTTCAATTAATTGTGTATTAATTTGTAGTACGTAGTCACATATTTCATTTTCACCTATACATCTTCATTTCTTTTTTTCTTGTACACTAACTAGGTCAGGGTCCCTTTCGATCCATTCTCTATTCGATCTGGTCCTTCATTTCTGGTTTTCTTCCATCTCACTCGTTATGTATCACCATCCACCCTTTCACCCATAATTAAGGCAGCAATGCATTATATATATGCATAATTAAGGTCAAGCAGGCCCAAGAAATCAGATGAAAAATTGATGGAAGCCATTACCAGACATATTATTACTCTGGAGTTCTCCAAATCTCCAATTAGTATAACGACTTGTATGGATTATTATATGTAGCTTCCTTTTGAGAAGCTAAATGTACCACGTACGCTTATCTTTCAGTACATTTACATGAACTCTGCTAAATGGCAAACTTCTAC ] [+] EMBL AU166839 [ TAGTACGTAGTCACATATTTCATTTTCACCTANACATCTTCATTTCTTTTTTTCTTGTACACTAACTAGGTCAGGGTCCCTTTCGATCCATTCTCTATTCGATCTGGTCCTTCATTTCTGGTTTTCTTCCATCTCACTCGTTATGTATCACCATCCACCCTTTCACCCATAATTAAGGCAGCAATGCATTATATATATGCATAATTAAGGTCAAGCAGGCCCAAGAAATCAGATGAAAAATTGATGGAAGCCATTACCAGACATATTATTACTCTGGAGTTCTCCAAATCTCCAATTAGTATAACGACTTGTATGGATTATTATATGTAGCTTCCTTTTGAGAAGCTAAATGTACCACGTACGCTTATCTTTCAGTACATTTACATGAACTCTGCTAAATGGCAAACTTCTACATATGCAGATCGCTGCATACCTAAAAAAAAAA] consensusID : consensus_12973#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 790 fasta sequence [GTGTATTTGGCATGCTAACAAAGGACTGTGGTAAGTCCAATTTTGCATTGTGTAGTCTGGTCTAGCAATTAAGGTCTTCTTAATTCTCCTTTAAGGTGAACGTTGCATTAATTTTTTACAAGAAAATCTCTCATCCAATGTGTCGTCAGTCTAGTACACGAGTAAATTAACCATCCTGCATGTATAGGTCACAGTCAGTTAATCAGTGTGTTCGTGTTAACTTAGCTTCTAGGAAAAGTTTTGTTGTGCCTTGTACCTCTTAAGGAAGAGAGTGCAGGGGAAATAATATGTGGTAGAGTCGCTGCTGATTTTTCATATGCAGCTTTAGTTCAAGATGTCCCCACAGAAGCTTGTGGGGGCTACTGAAAGAGTTCAATTAATTGTGTATTAATTTGTAGTACGTAGTCACATATTTCATTTTCACCTATACATCTTCATTTCTTTTTTTCTTGTACACTAACTAGGTCAGGGTCCCTTTCGATCCATTCTCTATTCGATCTGGTCCTTCATTTCTGGTTTTCTTCCATCTCACTCGTTATGTATCACCATCCACCCTTTCACCCATAATTAAGGCAGCAATGCATTATATATATGCATAATTAAGGTCAAGCAGGCCCAAGAAATCAGATGAAAAATTGATGGAAGCCATTACCAGACATATTATTACTCTGGAGTTCTCCAAATCTCCAATTAGTATAACGACTTGTATGGATTATTATATGTAGCTTCCTTTTGAGAAGCTAAATGTACCACGTACGCTTATCTTTCAGTACATTTACATGAACTCTGC] [-] EMBL CB629286 [GTGTATTTGGCATGCTAACAAAGGACTGTGGTAAGTCCAATTTTGCATTGTGTAGTCTGGTCTAGCAATTAAGGTCTTCTTAATTCTCCTTTAAGGTGAACGTTGCATTAATTTTTTACAAGAAAATCTCTCATCCAATGTGTCGTCAGTCTAGTACACGAGTAAATTAACCATCCTGCATGTATAGGTCACAGTCAGTTAATCAGTGTGTTCGTGTTAACTTAGCTTCTAGGAAAAGTTTTGTTGTGCCTTGTACCTCTTAAGGAAGAGAGTGCAGGGGAAATAATATGTGGTAGAGTCGCTGCTGATTTTTCATATGCAGCTTTAGTTCAAGATGTCCCCACAGAAGCTTGTGGGGGCTACTGAAAGAGTTCAATTAATTGTGTATTAATTTGTAGTACGTAGTCACATATTTCATTTTCACCTATACATCTTCATTTCTTTTTTTCTTGTACACTAACTAGGTCAGGGTCCCTTTCGATCCATTCTCTATTCGATCTGGTCCTTCATTTCTGGTTTTCTTCCATCTCACTCGTTATGTATCACCATCCACCCTTTCACCCATAATTAAGGCAGCAATGCATTATATATATGCATAATTAAGGTCAAGCAGGCCCAAGAAATCAGATGAAAAATTGATGGAAGCCATTACCAGACATATTATTACTCTGGAGTTCTCCAAATCTCCAATTAGTATAACGACTTGTATGGATTATTATATGTAGCTTCCTTTTGAGAAGCTAAATGTACCACGTACGCTTATCTTTCAGTACATTTACATGAACTCTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12973#0 CTCTTCCTCTTCCTCTCTCTCGTTGATTTCTTTTCCCTTTGCCAGCTTTCGCTTTTCTTT 60 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 CCTCCTCCTCCTTTCGGCCTCTCCTCTCCTTCCTCTTTTGCTTCTTCTTCTTCTCTCTCT 120 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 CTACAACTCAAGCTAATAGGTGTAGTACTAGCAAAGGCCAGCATCCATATCGAGGCTATC 180 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 TAGGGTTGGTGCTAGCTACCTAGCTAGGTTGGACCCTTCTCTTCATCCTCCCTTGCATAT 240 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 CAAGCCTCGATAGATATAGCCATCAGCCCCCCTCTCGATCGCCCTTGCCTTTTGAGATCG 300 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 ATCACCAGGTTACTGTAGAAGTACAGATCGGAGCGAGCGATCGATCGAGGAAGAAGAAGA 360 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 GGTAGAGGTTGTAGATGGCTGTGTCGGCTGGCGGCGGCGGCGGCGCGGCGGGGCAGTTCG 420 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 GCGACACGACGCTGACGAAGGTGTTCGTGGGGGGACTCGCGTGGGAGACGCAGAAGGAGG 480 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 GGATGCGGGGATACTTCGAGCAGTTCGGCGATATCCTCGAGGCCGTCGTCATCACCGACA 540 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 AGAACACCGGCAGATCCAAGGGCTACGGATTTGTTACATTCCGCGAGCCGGAGGCTGCTA 600 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 TGAAAGCTTGCTTTGATCCGTACCCGGTGATCGATGGGAGGAGGGCCAACTGCAATCTTG 660 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 CATATCTTGGGGTCCAGAGATCCAAGGCAGCTGCAGCGTCTCTGCAACCTTATGCTGGGC 720 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 ATATGAGGGCAATGAAGTCCATTATCCAGACAGGCGGTGGTGGTGCCAGCTTGAGCATGG 780 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 CAGATCATGGCATCCAGCAGGGGATCCCGACCTACAATGTGTATGGGTACTCACCTTATT 840 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 TCTCGGATTACGGCTATCCGCTGAGCTACTATCAAGCGTACGGTGGGCTTGGAGCCCAGT 900 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 ACCAGATGTTCGCTGGTGGCGCCGCCGCCGGGGCGGCGGGGCTAACAATGGCGAATCCTA 960 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 CCGGCGGCGGTCTCTACTCGCCGTACTTCCAGTACGGCCCAGCGGTGGCGGCGAACGCGG 1020 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 CTGCTGCCGGGTACGCCGGCATGCAGTACCCTCAGATGTACCAGTACGCGGCGGCGGCGG 1080 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 CGGCTGTCGGAGCCCCGACGGCGGCGACGACGGCCAGCCAGCTGACCGCCGTGGCCGGGC 1140 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 TCCAGCAGTACGCTGGCACTGTGGCTCTTGCTCCTAACTCTACCGGCCAAGCAGCAGGCA 1200 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 TGACAATGTCTCTGACAGCTCCAACTCTGCCGGCACCATCACCACAGTATCAGTACAGGC 1260 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 TCATTTCTTCTCATGTCGCTGCAGCTCCAGAGAAACCATTGGCCTAGAAAACCACGGCTG 1320 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 CCTTAAGTCTGCATCCATCTAAATACAGTATCTTCTTCCTCCACACACATGTGTCAGTCA 1380 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 TATCTCATATGCATATCATCTGTCCTAGCTCTCATGAGTATACTTACTCAGCTCACATAT 1440 consensus_12973#1 ------------------------------------------------------------ consensus_12973#0 TTACTAATTACACTCACGCGGTCACGCCAAATGTACCCACTTATGGGTTGAGTGGTGTAT 1500 consensus_12973#1 ------------------------------------------------------GTGTAT 6 ****** consensus_12973#0 TTGGCATGCTAACAAAGGACTGTGGTAAGTCCAATTTTGCATTGTGTAGTCTGGTCTAGC 1560 consensus_12973#1 TTGGCATGCTAACAAAGGACTGTGGTAAGTCCAATTTTGCATTGTGTAGTCTGGTCTAGC 66 ************************************************************ consensus_12973#0 AATTAAGGTCTTCTTAATTCTCCTTTAAGGTGAACGTTGCATTAATTTTTTACAAGAAAT 1620 consensus_12973#1 AATTAAGGTCTTCTTAATTCTCCTTTAAGGTGAACGTTGCATTAATTTTTTACAAGAAAA 126 *********************************************************** consensus_12973#0 TCTCTCATCCAATGTGTCGTCAGTCTAGTACACGAGTAAATTAACCATCCTGCATGTATA 1680 consensus_12973#1 TCTCTCATCCAATGTGTCGTCAGTCTAGTACACGAGTAAATTAACCATCCTGCATGTATA 186 ************************************************************ consensus_12973#0 GGTCACAGGTTAGCATCTTCAGTTAATCAGTGTGTTCATGTTAACTTAGCTTCTAGGAAA 1740 consensus_12973#1 GGTCACAG----------TCAGTTAATCAGTGTGTTCGTGTTAACTTAGCTTCTAGGAAA 236 ******** ******************* ********************** consensus_12973#0 AGTTTTGTTGTGCCTTGTACCTCTTAAGGAAGAGAGTGCAGGGGAAATAATATGTGGTAG 1800 consensus_12973#1 AGTTTTGTTGTGCCTTGTACCTCTTAAGGAAGAGAGTGCAGGGGAAATAATATGTGGTAG 296 ************************************************************ consensus_12973#0 AGTCGCTGCTGATTTTTCATATGCAGCTTTAGTTCAAGATGTCTCCACAGAAGCTTGTGG 1860 consensus_12973#1 AGTCGCTGCTGATTTTTCATATGCAGCTTTAGTTCAAGATGTCCCCACAGAAGCTTGTGG 356 ******************************************* **************** consensus_12973#0 GGGCTACTGAAAGAGTTCAATTAATTGTGTATTAATTTGTAGTACGTAGTCACATATTTC 1920 consensus_12973#1 GGGCTACTGAAAGAGTTCAATTAATTGTGTATTAATTTGTAGTACGTAGTCACATATTTC 416 ************************************************************ consensus_12973#0 ATTTTCACCTATACATCTTCATTTCTTTTTTTCTTGTACACTAACTAGGTCAGGGTCCCT 1980 consensus_12973#1 ATTTTCACCTATACATCTTCATTTCTTTTTTTCTTGTACACTAACTAGGTCAGGGTCCCT 476 ************************************************************ consensus_12973#0 TTCGATCCATTCTCTATTCGATCTGGTCCTTCATTTCTGGTTTTCTTCCATCTCACTCGT 2040 consensus_12973#1 TTCGATCCATTCTCTATTCGATCTGGTCCTTCATTTCTGGTTTTCTTCCATCTCACTCGT 536 ************************************************************ consensus_12973#0 TATGTATCACCATCCACCCTTTCACCCATAATTAAGGCAGCAATGCATTATATATATGCA 2100 consensus_12973#1 TATGTATCACCATCCACCCTTTCACCCATAATTAAGGCAGCAATGCATTATATATATGCA 596 ************************************************************ consensus_12973#0 TAATTAAGGTCAAGCAGGCCCAAGAAATCAGATGAAAAATTGATGGAAGCCATTACCAGA 2160 consensus_12973#1 TAATTAAGGTCAAGCAGGCCCAAGAAATCAGATGAAAAATTGATGGAAGCCATTACCAGA 656 ************************************************************ consensus_12973#0 CATATTATTACTCTGGAGTTCTCCAAATCTCCAATTAGTATAACGACTTGTATGGATTAT 2220 consensus_12973#1 CATATTATTACTCTGGAGTTCTCCAAATCTCCAATTAGTATAACGACTTGTATGGATTAT 716 ************************************************************ consensus_12973#0 TATATGTAGCTTCCTTTTGAGAAGCTAAATGTACCACGTACGCTTATCTTTCAGTACATT 2280 consensus_12973#1 TATATGTAGCTTCCTTTTGAGAAGCTAAATGTACCACGTACGCTTATCTTTCAGTACATT 776 ************************************************************ consensus_12973#0 TACATGAACTCTGCTAAATGGCAAACTTCTACATATGCAGATCGCTGCATACCTAAAAAA 2340 consensus_12973#1 TACATGAACTCTGC---------------------------------------------- 790 ************** consensus_12973#0 AAAA 2344 consensus_12973#1 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||