Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12988 cluster # 12988       Sequences # 12       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12988#0 length = 2113 sequences # 4  
consensus_12988#1 length = 842 sequences # 5  
consensus_12988#2 length = 798 sequences # 1  
consensus_12988#3 length = 371 sequences # 1  
consensus_12988#4 length = 368 sequences # 1  

consensusID : consensus_12988#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2113
fasta sequence
                              [AGTAAGGAACACAGGCGCCGCGGCCACAACCCACACGCGAACCGGCGAACACGAGCGAGAGTGCGAGAGCGAGACGCATCCTGCCACCACCGGCGACCAAGGCCCGCAGCGAGCCGGTCGCACGGTGGCACCTCGCGTCCTCGGCCCCTCCTCCTCGCCATCCGCCCATCCCTCGTCGGTCGCGGCCTCCCCGAACGAGCTGGCTCCGAGCCGAGCCAGCTCGGTACACTAACGAGCTGGAGCGAGCCGAGCCGAGCCAAGATATCCACCCCTAGTGTGGCCACAAACAACAAGAGAGAGCAGACACCACCACACCATCCAACCAACCAAATTCCTCTCTCCTCCGCCGCGCCCGCGCCGCAGCAAGCAGGAGGGCCTCCGCCCGTGCGATGCCGGCGGCGGCTAGGCTACGGGCGGCCCGGTGATGGCGACCTTCTTCCGCAGCGCCAACCTCGCCTCCAGGGTCTTCGACCGCCAGTTCCTCTCCCCACGCCCCGGCGCTACTGTTAACACTGTTAGACAGTTCTATGAGAACTTGGTTCCGAGTTACACTATATGTGACATAGATTGCCCAGATTATTCATTTCGTAAATTCACTGATGATGGCAACTATCTTGTGGCTTTTAGCCGGAACCACCAAGATTTAATCGTGTACCGTCCCATCTGGCCAACATTTTCATGCAATGAGCCATGCGACTCTCATGATCTTCCACCCAAAGCAAAGAAATTCGACAGCTTCTTTAAGCAGCTCTACTCAATTTCACTTGCATCTAGCAATGAATACATCTGCAAGGACTTTTTCCTTTACATGGAGTGCCATCAGTTTGGCTTATTTGCCACATCAACTGCACAAAGCAACGATTCAAGTGCCACTGAGGGTGCTATTCATGGGGTACCATCAATTGAGAAAATTACTTTCTATCTTGTCAGGCTAGACGATGGCGCAATACTAGATGAGAAAGCTTTCCGCAATGATTTTATCAATCTGGCTCATAGTATTGGAGCTTACTTGTATGAGGACCTGCTATGCATTGTCTCTCTTCGATATCAAACAATTCATGTCCTACAGATACGAGATTCAGGCAACCTTGTTGAAGTACGCAAAATTGGTGCATTTTGCCAGGAAGATGATGAGCTATTTCTCCATTCACATGGTCAGGCTGCACGAGGTGTTTCTTTTCTTCCTGGCATCAAGCAACGGTTGTTGTCATTTATTTTTCGCAAGACATGGAATGAGGAATCTGATCAGACCTTGAGAGTCCAGCATCTGAAGAAGAAGTTCTATTTTCACTTTCAAGACTATGTTGATCTTATCATATGGAAGGTGCAGTTTTTGGATCGTCATCACCTATTTATCAAGTTTGGTAGTGTGGATGGAGGGGTTTCTCGCAGCACTGAACAGAATTCAGCATTCTTTGCTGTGTACAACATGGAGACGACAGATATTGTTTCACTCTATCAGAATTCTTCGGAGGAGCTCTATTCATTGTTTGAATATTTTTATGACCATTTTCACACAAATCCACAAAATTCATCGCATGGAAATTTTATCTCGTCACATTCCAATAATGTTCATGCTCTCGATCAACTTCGGACAATTAAAAATAAAGCAAACAGCACCTCACAGTTTGTGAAAAAGATGATGGCGTCACTACCTTACACTTGTCAATCACAAAGTCCTTCGCCATACTTTGACCTATCATTGTTTCGGTATGATGAGAAGCTGATTTCAGCGATTGATCGGCACAGACACTGTACAGAGCATCCAATAAAATTTATATCAGTGAAACAGCCAAATGTTGTCAAATTCAAGATAAAACCAGGTTCAGATTCTGGTGCTTCTGACAGCAGGGCAAAAAGAATATCTTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTCAATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCTTGTAGTAGGATGTTTTATCGGCAAAGATCTTATTATAGGCAAAGGAAAAATGTGGGTAAAAAAACTCGAGACTAGTT]

[+] EMBL AK100613             [AGTAAGGAACACAGGCGCCGCGGCCACAACCCACACGCGAACCGGCGAACACGAGCGAGAGTGCGAGAGCGAGACGCATCCTGCCACCACCGGCGACCAAGGCCCGCAGCGAGCCGGTCGCACGGTGGCACCTCGCGTCCTCGGCCCCTCCTCCTCGCCATCCGCCCATCCCTCGTCGGTCGCGGCCTCCCCGAACGAGCTGGCTCCGAGCCGAGCCAGCTCGGTACACTAACGAGCTGGAGCGAGCCGAGCCGAGCCAAGATATCCACCCCTAGTGTGGCCACAAACAACAAGAGAGAGCAGACACCACCACACCATCCAACCAACCAAATTCCTCTCTCCTCCGCCGCGCCCGCGCCGCAGCAAGCAGGAGGGCCTCCGCCCGTGCGATGCCGGCGGCGGCTAGGCTACGGGCGGCCCGGTGATGGCGACCTTCTTCCGCAGCGCCAACCTCGCCTCCAGGGTCTTCGACCGCCAGTTCCTCTCCCCACGCCCCGGCGCTACTGTTAACACTGTTAGACAGTTCTATGAGAACTTGGTTCCGAGTTACACTATATGTGACATAGATTGCCCAGATTATTCATTTCGTAAATTCACTGATGATGGCAACTATCTTGTGGCTTTTAGCCGGAACCACCAAGATTTAATCGTGTACCGTCCCATCTGGCCAACATTTTCATGCAATGAGCCATGCGACTCTCATGATCTTCCACCCAAAGCAAAGAAATTCGACAGCTTCTTTAAGCAGCTCTACTCAATTTCACTTGCATCTAGCAATGAATACATCTGCAAGGACTTTTTCCTTTACATGGAGTGCCATCAGTTTGGCTTATTTGCCACATCAACTGCACAAAGCAACGATTCAAGTGCCACTGAGGGTGCTATTCATGGGGTACCATCAATTGAGAAAATTACTTTCTATCTTGTCAGGCTAGACGATGGCGCAATACTAGATGAGAAAGCTTTCCGCAATGATTTTATCAATCTGGCTCATAGTATTGGAGCTTACTTGTATGAGGACCTGCTATGCATTGTCTCTCTTCGATATCAAACAATTCATGTCCTACAGATACGAGATTCAGGCAACCTTGTTGAAGTACGCAAAATTGGTGCATTTTGCCAGGAAGATGATGAGCTATTTCTCCATTCACATGGTCAGGCTGCACGAGGTGTTTCTTTTCTTCCTGGCATCAAGCAACGGTTGTTGTCATTTATTTTTCGCAAGACATGGAATGAGGAATCTGATCAGACCTTGAGAGTCCAGCATCTGAAGAAGAAGTTCTATTTTCACTTTCAAGACTATGTTGATCTTATCATATGGAAGGTGCAGTTTTTGGATCGTCATCACCTATTTATCAAGTTTGGTAGTGTGGATGGAGGGGTTTCTCGCAGCACTGAACAGAATTCAGCATTCTTTGCTGTGTACAACATGGAGACGACAGATATTGTTTCACTCTATCAGAATTCTTCGGAGGAGCTCTATTCATTGTTTGAATATTTTTATGACCATTTTCACACAAATCCACAAAATTCATCGCATGGAAATTTTATCTCGTCACATTCCAATAATGTTCATGCTCTCGATCAACTTCGGACAATTAAAAATAAAGCAAACAGCACCTCACAGTTTGTGAAAAAGATGATGGCGTCACTACCTTACACTTGTCAATCACAAAGTCCTTCGCCATACTTTGACCTATCATTGTTTCGGTATGATGAGAAGCTGATTTCAGCGATTGATCGGCACAGACACTGTACAGAGCATCCAATAAAATTTATATCAGTGAAACAGCCAAATGTTGTCAAATTCAAGATAAAACCAGGTTCAGATTCTGGTGCTTCTGACAGCAGGGCAAAAAGAATATCTTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTCAATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCTTGTAGTAGGATGTTTTATCGGCAAAGATCTTATTATAGGCAAAGGAAAAATGTGGGT                    ]
[+] EMBL AK058683             [                                                                                                                                                                                                                                                                                                               ACACCACCACACCATCCAACCAACCAAATTCCTCTCTCCTCCGCCGCGCCCGCGCCGCAGCAAGCAGGAGGGCCTCCGCCCGTGCGATGCCGGCGGCGGCTAGGCTACGGGCGGCCCGGTGATGGCGACCTTCTTCCGCAGCGCCAACCTCGCCTCCAGGGTCTTCGACCGCCAGTTCCTCTCCCCACGCCCCGGCGCTACTGTTAACACTGTTAGACAGTTCTATGAGAACTTGGTTCCGAGTTACACTATATGTGACATAGATTGCCCAGATTATTCATTTCGTAAATTCACTGATGATGGCAACTATCTTGTGGCTTTTAGCCGGAACCACCAAGATTTAATCGTGTACCGTCCCATCTGGCCAACATTTTCATGCAATGAGCCATGCGACTCTCATGATCTTCCACCCAAAGCAAAGAAATTCGACAGCTTCTTTAAGCAGCTCTACTCAATTTCACTTGCATCTAGCAATGAATACATCTGCAAGGACTTTTTCCTTTACATGGAGTGCCATCAGTTTGGCTTATTTGCCACATCAACTGCACAAAGCAACGATTCAAGTGCCACTGAGGGTGCTATTCATGGGGTACCATCAATTGAGAAAATTACTTTCTATCTTGTCAGGCTAGACGATGGCGCAATACTAGATGAGAAAGCTTTCCGCAATGATTTTATCAATCTGGCTCATAGTATTGGAGCTTACTTGTATGAGGACCTGCTATGCATTGTCTCTCTTCGATATCAAACAATTCATGTCCTACAGATACGAGATTCAGGCAACCTTGTTGAAGTACGCAAAATTGGTGCATTTTGCCAGGAAGATGATGAGCTATTTCTCCATTCACATGGTCAGGCTGCACGAGGTGTTTCTTTTCTTCCTGGCATCAAGCAACGGTTGTTGTCATTTATTTTTCGCAAGACATGGAATGAGGAATCTGATCAGACCTTGAGAGTCCAGCATCTGAAGAAGAAGTTCTATTTTCACTTTCAAGACTATGTTGATCTTATCATATGGAAGGTGCAGTTTTTGGATCGTCATCACCTATTTATCAAGTTTGGTAGTGTGGATGGAGGGGTTTCTCGCAGCACTGAACAGAATTCAGCATTCTTTGCTGTGTACAACATGGAGACGACAGATATTGTTTCACTCTATCAGAATTCTTCGGAGGAGCTCTATTCATTGTTTGAATATTTTTATGACCATTTTCACACAAATCCACAAAATTCATCGCATGGAAATTTTATCTCGTCACATTCCAATAATGTTCATGCTCTCGATCAACTTCGGACAATTAAAAATAAAGCAAACAGCACCTCACAGTTTGTGAAAAAGATGATGGCGTCACTACCTTACACTTGTCAATCACAAAGTCCTTCGCCATACTTTGACCTATCATTGTTTCGGTATGATGAGAAGCTGATTTCAGCGATTGATCGGCACAGACACTGTACAGAGCATCCAATAAAATTTATATCAGTGAAACAGCCAAATGTTGTCAAATTCAAGATAAAACCAGGTTCAGATTCTGGTGCTTCTGACAGCAGGGCAAAAAGAATATCTTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTCAATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCTTGTAGTAGGATGTTTTATCGGCAAAGATCTTATTATAGGCAAAGGAAAAATGTGGGT                    ]
[+] EMBL CB635144             [                                                                                                                                                                                                                                                                                                                                                             CGCCCGCGCCGCAGCAAGCAGGAGGGCCTCCGCCCGTGCGATGCCGGCGGCGGCTAGGCTACGGGCGGCCCGGTGATGGCGACCTTCTTCCGCAGCGCCAACCTCGCCTCCAGGGTCTTCGACCGCCAGTTCCTCTCCCCACGCCCCGGCGCTACTGTTAACACTGTTAGACAGTTCTATGAGAACTTGGTTCCGAGTTACACTATATGTGACATAGATTGCCCAGATTATTCATTTCGTAAATTCACTGATGATGGCAACTATCTTGTGGCTTTTAGCCGGAACCACCAAGATTTAATCGTGTACCGTCCCATCTGGCCAACATTTTCATGCAATGAGCCATGCGACTCTCATGATCTTCCACCCAAAGCAAAGAAATTCGACAGCTTCTTTAAGCAGCTCTACTCAATTTCACTTGCATCTAGCAATGAATACATCTGCAAGGACTTTTTCCTTTACATGGAGTGCCATCAGTTTGGCTTATTTGCCACATCAACTGCACAAAGCAACGATTCAAGTGCCACTGAGGGTGCTATTCATGGGGTACCATCAATTGAGAAAATTACTTTCTATCTTGTCAGGCTAGACGATGGCGCAATACTAGATGAGAAAGCTTTCCGCAATGATTTTATCAATCTGGCTCATAGTATTGGAGCTTACTTGTATGAGGACCTGCTATGCATTGTCTCTCTTCGATATCAAACAATTCATGTCCTACAGATACGAGATTCAGGCAACCTTGTTGAAGTACGCAAAATTGGTGCATTTTGCCAGGAAGATGATGAGCTATTTCTCCATTCACATGGTCAGGCTGCACGAGGTGTTTCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CF325866             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGGAAATTTTATCTCGTCACATTCCAATAATGTTCATGCTCTCGATCAACTTCGGACAATTAAAAATAAAGCAAACAGCACCTCACAGTTTGTGAAAAAGATGATGGCGTCACTACCTTACACTTGTCAATCACAAAGTCCTTCGCCATACTTTGACCTATCATTGTTTCGGTATGATGAGAAGCTGATTTCAGCGATTGATCGGCACAGACACTGTACAGAGCATCCAATAAAATTTATATCAGTGAAACAGCCAAATGTTGTCAAATTCAAGATAAAACCAGGTTCAGATTCTGGTGCTTCTGACAGCAGGGCAAAAAGAATATCTTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATAAAACAGTTCCCTCAATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCTTGTAGTAGGATGTTTTATCGGCAAAGATCTTATTATAGGCAAAGGAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]


>consensus_12988#0 AGTAAGGAACACAGGCGCCGCGGCCACAACCCACACGCGAACCGGCGAACACGAGCGAGA GTGCGAGAGCGAGACGCATCCTGCCACCACCGGCGACCAAGGCCCGCAGCGAGCCGGTCG CACGGTGGCACCTCGCGTCCTCGGCCCCTCCTCCTCGCCATCCGCCCATCCCTCGTCGGT CGCGGCCTCCCCGAACGAGCTGGCTCCGAGCCGAGCCAGCTCGGTACACTAACGAGCTGG AGCGAGCCGAGCCGAGCCAAGATATCCACCCCTAGTGTGGCCACAAACAACAAGAGAGAG CAGACACCACCACACCATCCAACCAACCAAATTCCTCTCTCCTCCGCCGCGCCCGCGCCG CAGCAAGCAGGAGGGCCTCCGCCCGTGCGATGCCGGCGGCGGCTAGGCTACGGGCGGCCC GGTGATGGCGACCTTCTTCCGCAGCGCCAACCTCGCCTCCAGGGTCTTCGACCGCCAGTT CCTCTCCCCACGCCCCGGCGCTACTGTTAACACTGTTAGACAGTTCTATGAGAACTTGGT TCCGAGTTACACTATATGTGACATAGATTGCCCAGATTATTCATTTCGTAAATTCACTGA TGATGGCAACTATCTTGTGGCTTTTAGCCGGAACCACCAAGATTTAATCGTGTACCGTCC CATCTGGCCAACATTTTCATGCAATGAGCCATGCGACTCTCATGATCTTCCACCCAAAGC AAAGAAATTCGACAGCTTCTTTAAGCAGCTCTACTCAATTTCACTTGCATCTAGCAATGA ATACATCTGCAAGGACTTTTTCCTTTACATGGAGTGCCATCAGTTTGGCTTATTTGCCAC ATCAACTGCACAAAGCAACGATTCAAGTGCCACTGAGGGTGCTATTCATGGGGTACCATC AATTGAGAAAATTACTTTCTATCTTGTCAGGCTAGACGATGGCGCAATACTAGATGAGAA AGCTTTCCGCAATGATTTTATCAATCTGGCTCATAGTATTGGAGCTTACTTGTATGAGGA CCTGCTATGCATTGTCTCTCTTCGATATCAAACAATTCATGTCCTACAGATACGAGATTC AGGCAACCTTGTTGAAGTACGCAAAATTGGTGCATTTTGCCAGGAAGATGATGAGCTATT TCTCCATTCACATGGTCAGGCTGCACGAGGTGTTTCTTTTCTTCCTGGCATCAAGCAACG GTTGTTGTCATTTATTTTTCGCAAGACATGGAATGAGGAATCTGATCAGACCTTGAGAGT CCAGCATCTGAAGAAGAAGTTCTATTTTCACTTTCAAGACTATGTTGATCTTATCATATG GAAGGTGCAGTTTTTGGATCGTCATCACCTATTTATCAAGTTTGGTAGTGTGGATGGAGG GGTTTCTCGCAGCACTGAACAGAATTCAGCATTCTTTGCTGTGTACAACATGGAGACGAC AGATATTGTTTCACTCTATCAGAATTCTTCGGAGGAGCTCTATTCATTGTTTGAATATTT TTATGACCATTTTCACACAAATCCACAAAATTCATCGCATGGAAATTTTATCTCGTCACA TTCCAATAATGTTCATGCTCTCGATCAACTTCGGACAATTAAAAATAAAGCAAACAGCAC CTCACAGTTTGTGAAAAAGATGATGGCGTCACTACCTTACACTTGTCAATCACAAAGTCC TTCGCCATACTTTGACCTATCATTGTTTCGGTATGATGAGAAGCTGATTTCAGCGATTGA TCGGCACAGACACTGTACAGAGCATCCAATAAAATTTATATCAGTGAAACAGCCAAATGT TGTCAAATTCAAGATAAAACCAGGTTCAGATTCTGGTGCTTCTGACAGCAGGGCAAAAAG AATATCTTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATA TATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTC AATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCTTGTA GTAGGATGTTTTATCGGCAAAGATCTTATTATAGGCAAAGGAAAAATGTGGGTAAAAAAA CTCGAGACTAGTT



consensusID : consensus_12988#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 842
fasta sequence
                              [ATTTTCAAAATTTCACAGTTTACAGTCAAGTTCAAACTTCAAACACATAGAAGATGCTACCTTGACTAACAAATATGTGACACAATCTTCTCTAAATATAAGCCACGCGAGGCGCTTTTGTCTATTTTCTCCCCCTTTTGCCCCTGGTAAATAAAAACTACAACTCGCATGAATTATGGTTGTTCTTTTCCGTGTGGGCATAACTGAAGGGTAAGAAAATCATCTACCCCCTTTTGTAGGTCCCTTTGATCCACTCCTATGAATAAATGGCAGTTTTTTTTTTTTCTTATTGTTATTTAGTTCTTGACATTTCCTTGTCCCTCGTTTTCAGCTGATTTCAGCGATTGATCGGCACAGACACTGTACAGAGCATCCAATAAAATTTATATCAGTGAAGCAGCCAAATGTTGTCAAATTCAAGATAAAACCAGGTTCAGATTCTGGTGCTTCTGACAGCAGGGCAAAAAGAATATCTTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTCAATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCTTGTAGTAGGATGTTTTATCGGCAAAGATCTTATTATAGGCAAAGGAAAAATGTGGGTTTAGGTTCTCCTTGCTTCGAGTATGCTGGAATGTACATTTTGTAGGAATATGGCTGTCTGAAGGTAAATGTAGTTCATCTAAAAAAGGAAGGTAAAATAGAGTTAACAAAATGAGCTTTTATTTTGAATTCAAAAAAAAAA]

[-] EMBL CB673009             [ATTTTCAAAATTTCACAGTTTACAGTCAAGTTCAAACTTCAAACACATAGAAGATGCTACCTTGACTAACAAATATGTGACACAATCTTCTCTAAATATAAGCCACGCGAGGCGCTTTTGTCTATTTTCTCCCCCTTTTGCCCCTGGTAAATAAAAACTACAACTCGCATGAATTATGGTTGTTCTTTTCCGTGTGGGCATAACTGAAGGGTAAGAAAATCATCTACCCCCTTTTGTAGGTCCCTTTGATCCACTCCTATGAATAAATGGCAGTTTTTTTTTTTTCTTATTGTTATTTAGTTCTTGACATTTCCTTGTCCCTCGTTTTCAGCTGATTTCAGCGATTGATAGGCACTGACACTGTACAGAGCATCCAATAAAATTCATATCAGTGAAGCAGCCAAATGTTGTCAAATTCAAGATAAAACCAGGTTCAGATTTTGGTGCTTTTGACAGCAGGGCAAAAAGAATTTTTTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTTTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAAAGATATTGCCGTTCCCTCAATTGTATTTGTAACAGTTATGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCCTGTAGTAGGATGTTTTATCGGCAAAGATCTTATTATTTCTAAGGGAAAAATGTGGTTTTAG                                                                                                                                         ]
[-] EMBL CB635145             [                                         AACACATAGAAGATGCTACCTTGACTAACAAATATGTGACACAATCTTCTCTAAATATAAGCCATGCGAGGCACTTTTGTCTATTTTATCCCCCTTTTGACTTTGCTAAATAAAAACTACCACTGGCATGAATTATGGTTGTTCTTTTCCATGTGGGCATAACTGAAGGGTAAGAAAATCATCTACCCACTTTCATAGGTCCCTTTGATCCACTCCTATGAATAAAT    GTTAGTTTTTTTTCTTATTGTTATTTAGTTCTTGACATTTCCTTGTCCCTCGTTTTCAGCTGATTTCAGCGATTGATCGGCACAGACACTGTACAGAGCATCCAATAAAATTTATATCAGTGAAACAGCCAAATGTTGTCAAATTCAAGATAAAACCAGGTTCAGATTCTGGTGCTTCTGACAGCAGGGCAAAAAGAATATCTTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTCAATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCTTGTAGTAGGATGTTTTATCGGCAAAGATCTTATTATAGGCAAAGGAAAAATGTGGGTTTAGGTTCTCCTTGCTTCGAGTATGCTGGAATGTACATTTTGTAGGAATATGGCTGTCTGAAGGTAAATGTAGTTCATCTAAAAAAGGAAGGTAAAATAGAGTTAACAAAATGAGCTTTTATTTTGAATT           ]
[-] EMBL CA998417             [                                                                                                                                                                                                                                                                                                                                          GCTGATTTCAGCGATTGATCGGCACAGACACTGTACAGAGCATCCAATATAATTTATATCAGTGAACCAGCCAAATGTTGTCAAATTCAAGATAAAACCAGGTTCAGATTATGGTGCTTCTGACAGCAGGGCAAAAAGAATATCTTCGTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAGCGATATTGCCGTTCCCTCAATTGTATTTGTAACAGTTGTCAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCTTGTAGTAGGATGTTTTATCGGCAAAGATCTTATTATAGGCAAAGGAAAAATGTGGGTTTAGGTTCTCCTTGCTTCGAGTATGCTGGAATGTACATTTAGTAGGAATATGGCTGTCTGAAGGTAAATGTAGTTCATATCAA                                                          ]
[-] EMBL CA998418             [                                                                                                                                                                                                                                                                                                                                                                                                                           CAAATTCATGATAAACCCAGGTTCAGATTCTGGTGCTTCTGACAGCAGGGCAAAAAGAATATCTTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTGTATTCAGCAGACATATATGCAGCCAACTGTTGTCTATTTACATTTCAGGAGATAGAGCGATATTGCCGTTCCGTCAATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCTCGTAGTAGGATGTTTTATCGGCAAAGATCTTATTATAGGCAAAGGAAAAACGTGGGTTTAGGTTCTCTTTGCTTGGAGTATGCTGGCATGTACATTTTGTAGGAATATGGCTGTGTGAAGGTAAATGTAGTTCATATAA                                                           ]
[+] EMBL BI813816             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTCAATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTT GCCGCCTGTAGTAGGATGTTTTATCGGCAAAGATCTTATTATAGGCAAAGGAAAAATGTGGGTTTAGGTTCTCCTTGCTTCGATTATGCTGGAATATACATTTTGTAGGAATATGGCTGTCTGAAGGTAAATGTAGTTCATCTAAAAAAGGAAGGTAAAATAGAGTTAAC AAATGAGCTTTTATTTTGAATTCAAAAAAAAAA]


>consensus_12988#1 ATTTTCAAAATTTCACAGTTTACAGTCAAGTTCAAACTTCAAACACATAGAAGATGCTAC CTTGACTAACAAATATGTGACACAATCTTCTCTAAATATAAGCCACGCGAGGCGCTTTTG TCTATTTTCTCCCCCTTTTGCCCCTGGTAAATAAAAACTACAACTCGCATGAATTATGGT TGTTCTTTTCCGTGTGGGCATAACTGAAGGGTAAGAAAATCATCTACCCCCTTTTGTAGG TCCCTTTGATCCACTCCTATGAATAAATGGCAGTTTTTTTTTTTTCTTATTGTTATTTAG TTCTTGACATTTCCTTGTCCCTCGTTTTCAGCTGATTTCAGCGATTGATCGGCACAGACA CTGTACAGAGCATCCAATAAAATTTATATCAGTGAAGCAGCCAAATGTTGTCAAATTCAA GATAAAACCAGGTTCAGATTCTGGTGCTTCTGACAGCAGGGCAAAAAGAATATCTTCCTT CTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAAC TGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTCAATTGTATTTGT AACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCTTGTAGTAGGATGTTTT ATCGGCAAAGATCTTATTATAGGCAAAGGAAAAATGTGGGTTTAGGTTCTCCTTGCTTCG AGTATGCTGGAATGTACATTTTGTAGGAATATGGCTGTCTGAAGGTAAATGTAGTTCATC TAAAAAAGGAAGGTAAAATAGAGTTAACAAAATGAGCTTTTATTTTGAATTCAAAAAAAA AA



consensusID : consensus_12988#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 798
fasta sequence
                              [AGGGTATTATTTTTTTTGACTCACTACAGTTCTTGGCTCTGTTATTCTGTTTTTATTGTTTCCACAAGGTGTGAGGTTGTTTGAAAGTTATTGTGCTAATTCCTACATCTTTTGCAATGTTCTGATTAAAAACCGCACGAGTTTCAATTATTAAGTCAATACTGCTCAGTTCTACATGCTTGGATATAATGTACAGCAACACTAAATCACCAACATTGTACTGAATAATACACTAAATCCCAAATGCATAATGAAAGTTTTCTTATTTTCTGAATCGTCTTGGCATTGAACTGTCTATGATGTGAGGAATTTAAAAGGTATCCCTGTATTACCCTTAAGCCTTGAACCTTGTGAGCTTGAGCAGTCTTCCAGTAAGGGCCTTTTTTTATGTCTGCTTTCTATTAACACCAGGACAAGTGGTTTGCTTGTGAAAATTGTAGAATGAGCCAGATCTTTGTTACGGAAAGCTAGAGGTGTGAAATTACTAGTTGATGATCTTGGATATTTCTTGAAATCCACATTTATTTAATGTTATCTTACTATTTATATATGGCATAAGGCATATGCTAACTAATTTGTGATGCTGACTTTTGGTAAATGCCTGCTCTATATTTAGCAGTTTGTTAAAAAGATGATGGCGTCACTACCTTACACTTGTCAATCACAAAGTCCTTCACCATACTTTGACCTATCATTGTTTCGGTATGATAAGGTACACTCTTCAACTTGTTTGAAATAACTATACATCAGACAGCAGTTGATATTTTCAAAATTTCACAGTTTACAGTCAAGTTCAAA]

[+] EMBL CB673008             [AGGGTATTATTTTTTTTGACTCACTACAGTTCTTGGCTCTGTTATTCTGTTTTTATTGTTTCCACAAGGTGTGAGGTTGTTTGAAAGTTATTGTGCTAATTCCTACATCTTTTGCAATGTTCTGATTAAAAACCGCACGAGTTTCAATTATTAAGTCAATACTGCTCAGTTCTACATGCTTGGATATAATGTACAGCAACACTAAATCACCAACATTGTACTGAATAATACACTAAATCCCAAATGCATAATGAAAGTTTTCTTATTTTCTGAATCGTCTTGGCATTGAACTGTCTATGATGTGAGGAATTTAAAAGGTATCCCTGTATTACCCTTAAGCCTTGAACCTTGTGAGCTTGAGCAGTCTTCCAGTAAGGGCCTTTTTTTATGTCTGCTTTCTATTAACACCAGGACAAGTGGTTTGCTTGTGAAAATTGTAGAATGAGCCAGATCTTTGTTACGGAAAGCTAGAGGTGTGAAATTACTAGTTGATGATCTTGGATATTTCTTGAAATCCACATTTATTTAATGTTATCTTACTATTTATATATGGCATAAGGCATATGCTAACTAATTTGTGATGCTGACTTTTGGTAAATGCCTGCTCTATATTTAGCAGTTTGTTAAAAAGATGATGGCGTCACTACCTTACACTTGTCAATCACAAAGTCCTTCACCATACTTTGACCTATCATTGTTTCGGTATGATAAGGTACACTCTTCAACTTGTTTGAAATAACTATACATCAGACAGCAGTTGATATTTTCAAAATTTCACAGTTTACAGTCAAGTTCAAA]


>consensus_12988#2 AGGGTATTATTTTTTTTGACTCACTACAGTTCTTGGCTCTGTTATTCTGTTTTTATTGTT TCCACAAGGTGTGAGGTTGTTTGAAAGTTATTGTGCTAATTCCTACATCTTTTGCAATGT TCTGATTAAAAACCGCACGAGTTTCAATTATTAAGTCAATACTGCTCAGTTCTACATGCT TGGATATAATGTACAGCAACACTAAATCACCAACATTGTACTGAATAATACACTAAATCC CAAATGCATAATGAAAGTTTTCTTATTTTCTGAATCGTCTTGGCATTGAACTGTCTATGA TGTGAGGAATTTAAAAGGTATCCCTGTATTACCCTTAAGCCTTGAACCTTGTGAGCTTGA GCAGTCTTCCAGTAAGGGCCTTTTTTTATGTCTGCTTTCTATTAACACCAGGACAAGTGG TTTGCTTGTGAAAATTGTAGAATGAGCCAGATCTTTGTTACGGAAAGCTAGAGGTGTGAA ATTACTAGTTGATGATCTTGGATATTTCTTGAAATCCACATTTATTTAATGTTATCTTAC TATTTATATATGGCATAAGGCATATGCTAACTAATTTGTGATGCTGACTTTTGGTAAATG CCTGCTCTATATTTAGCAGTTTGTTAAAAAGATGATGGCGTCACTACCTTACACTTGTCA ATCACAAAGTCCTTCACCATACTTTGACCTATCATTGTTTCGGTATGATAAGGTACACTC TTCAACTTGTTTGAAATAACTATACATCAGACAGCAGTTGATATTTTCAAAATTTCACAG TTTACAGTCAAGTTCAAA



consensusID : consensus_12988#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 371
fasta sequence
                              [TAGATGAACANCATCTGGTGCTTCTGACAGCAGGGGCAAAAAGAAATATCTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGGAGATAGAAACGATATTGCCGTTCCCTCAATTGTATTTGTTTACAGTTGTGNAGCGGTGCACAGCTCAANTAAAAATTTTGGGNCGCCTGTNATTAGGATGTTTTATCGGCCAAAGATCTTATTATANGGCCAAAGGAAAAATGTGGGTTTTAAGGTTCTCCTTGCTTCNAATTATGCTGGAAATATACATTTTTGTTATGAAATATGGGCTGTCTGAAAGGTAAATGTTANTT]

[+] EMBL AA754616             [TAGATGAACANCATCTGGTGCTTCTGACAGCAGGGGCAAAAAGAAATATCTCCTTCTTGTTTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGGAGATAGAAACGATATTGCCGTTCCCTCAATTGTATTTGTTTACAGTTGTGNAGCGGTGCACAGCTCAANTAAAAATTTTGGGNCGCCTGTNATTAGGATGTTTTATCGGCCAAAGATCTTATTATANGGCCAAAGGAAAAATGTGGGTTTTAAGGTTCTCCTTGCTTCNAATTATGCTGGAAATATACATTTTTGTTATGAAATATGGGCTGTCTGAAAGGTAAATGTTANTT]


>consensus_12988#3 TAGATGAACANCATCTGGTGCTTCTGACAGCAGGGGCAAAAAGAAATATCTCCTTCTTGT TTCACCCATTTTTCCCTCTCGCACTTTCTATTCAGCAGACATATATGCAGCCAACTGTTG TCAATTTACATTTCAGGGAGATAGAAACGATATTGCCGTTCCCTCAATTGTATTTGTTTA CAGTTGTGNAGCGGTGCACAGCTCAANTAAAAATTTTGGGNCGCCTGTNATTAGGATGTT TTATCGGCCAAAGATCTTATTATANGGCCAAAGGAAAAATGTGGGTTTTAAGGTTCTCCT TGCTTCNAATTATGCTGGAAATATACATTTTTGTTATGAAATATGGGCTGTCTGAAAGGT AAATGTTANTT



consensusID : consensus_12988#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 368
fasta sequence
                              [GGGTCGACCCACGGCGTCCGCACCACGCGTCCGGTTACTAGTGGTCTGTGGCCGATCAAATCGGCTGGAGAATTTATATCAAGTGGAAACTAGCCAAATGTTGTCAAAATTCATAGATANAAACCAAGGTTCTAGATTCTGGTGCNTTCTGACAAGCAGGGCCAAAAGAGAATATCGTTCCTTCTTGTTTCAACACCAATTTTTCCACTCCNTCTGCACTTTCTATTCGAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTCAATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCCTGTAAAAAAAAAA]

[+] EMBL BQ906741             [GGGTCGACCCACGGCGTCCGCACCACGCGTCCGGTTACTAGTGGTCTGTGGCCGATCAAATCGGCTGGAGAATTTATATCAAGTGGAAACTAGCCAAATGTTGTCAAAATTCATAGATANAAACCAAGGTTCTAGATTCTGGTGCNTTCTGACAAGCAGGGCCAAAAGAGAATATCGTTCCTTCTTGTTTCAACACCAATTTTTCCACTCCNTCTGCACTTTCTATTCGAGCAGACATATATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTCAATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCCTGTAAAAAAAAAA]


>consensus_12988#4 GGGTCGACCCACGGCGTCCGCACCACGCGTCCGGTTACTAGTGGTCTGTGGCCGATCAAA TCGGCTGGAGAATTTATATCAAGTGGAAACTAGCCAAATGTTGTCAAAATTCATAGATAN AAACCAAGGTTCTAGATTCTGGTGCNTTCTGACAAGCAGGGCCAAAAGAGAATATCGTTC CTTCTTGTTTCAACACCAATTTTTCCACTCCNTCTGCACTTTCTATTCGAGCAGACATAT ATGCAGCCAACTGTTGTCAATTTACATTTCAGGAGATAGAACGATATTGCCGTTCCCTCA ATTGTATTTGTAACAGTTGTGAGCGGTGCACAGCTCAGTAAAAATTTTGGCCGCCTGTAA AAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      AGTAAGGAACACAGGCGCCGCGGCCACAACCCACACGCGAACCGGCGAACACGAGCGAGA 60
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      GTGCGAGAGCGAGACGCATCCTGCCACCACCGGCGACCAAGGCCCGCAGCGAGCCGGTCG 120
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      CACGGTGGCACCTCGCGTCCTCGGCCCCTCCTCCTCGCCATCCGCCCATCCCTCGTCGGT 180
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      CGCGGCCTCCCCGAACGAGCTGGCTCCGAGCCGAGCCAGCTCGGTACACTAACGAGCTGG 240
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      AGCGAGCCGAGCCGAGCCAAGATATCCACCCCTAGTGTGGCCACAAACAACAAGAGAGAG 300
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      CAGACACCACCACACCATCCAACCAACCAAATTCCTCTCTCCTCCGCCGCGCCCGCGCCG 360
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      CAGCAAGCAGGAGGGCCTCCGCCCGTGCGATGCCGGCGGCGGCTAGGCTACGGGCGGCCC 420
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      GGTGATGGCGACCTTCTTCCGCAGCGCCAACCTCGCCTCCAGGGTCTTCGACCGCCAGTT 480
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      CCTCTCCCCACGCCCCGGCGCTACTGTTAACACTGTTAGACAGTTCTATGAGAACTTGGT 540
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      TCCGAGTTACACTATATGTGACATAGATTGCCCAGATTATTCATTTCGTAAATTCACTGA 600
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      TGATGGCAACTATCTTGTGGCTTTTAGCCGGAACCACCAAGATTTAATCGTGTACCGTCC 660
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      CATCTGGCCAACATTTTCATGCAATGAGCCATGCGACTCTCATGATCTTCCACCCAAAGC 720
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      AAAGAAATTCGACAGCTTCTTTAAGCAGCTCTACTCAATTTCACTTGCATCTAGCAATGA 780
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      ATACATCTGCAAGGACTTTTTCCTTTACATGGAGTGCCATCAGTTTGGCTTATTTGCCAC 840
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      ATCAACTGCACAAAGCAACGATTCAAGTGCCACTGAGGGTGCTATTCATGGGGTACCATC 900
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      AATTGAGAAAATTACTTTCTATCTTGTCAGGCTAGACGATGGCGCAATACTAGATGAGAA 960
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      AGCTTTCCGCAATGATTTTATCAATCTGGCTCATAGTATTGGAGCTTACTTGTATGAGGA 1020
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      CCTGCTATGCATTGTCTCTCTTCGATATCAAACAATTCATGTCCTACAGATACGAGATTC 1080
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      AGGCAACCTTGTTGAAGTACGCAAAATTGGTGCATTTTGCCAGGAAGATGATGAGCTATT 1140
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      TCTCCATTCACATGGTCAGGCTGCACGAGGTGTTTCTTTTCTTCCTGGCATCAAGCAACG 1200
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      GTTGTTGTCATTTATTTTTCGCAAGACATGGAATGAGGAATCTGATCAGACCTTGAGAGT 1260
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      CCAGCATCTGAAGAAGAAGTTCTATTTTCACTTTCAAGACTATGTTGATCTTATCATATG 1320
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      ------------------------------------------------------------
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      GAAGGTGCAGTTTTTGGATCGTCATCACCTATTTATCAAGTTTGGTAGTGTGGATGGAGG 1380
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ---------------------------------------AGGGTATTATTTTTTTTGACT 21
                                                                                   

consensus_12988#1      -------------ATTTTCAAAATTTCACAGTTTACAGTCAAGTTCAAACTTCAAACACA 47
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      GGTTTCTCGCAGCACTGAACAGAATTCAGCATTCTTTGCTGTGTACAACATGGAGACGAC 1440
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      CACTACAGTTCTTGGCTCTGTTATTCTGTTTTTATTGTTTCCACAAGGTGTGAGGTTGTT 81
                                                                                   

consensus_12988#1      TAGAAGATGCTACCTTGACTAACAAATATGTGACACAATCTTCTCTAAATATAAGCCACG 107
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      AGATATTGTTTCACTCTATCAGAATTCTTCGGAGGAGCTCTATTCATTGTTTGAATATTT 1500
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      TGAAAGTTATTGTGCTAATTCCTACATCTTTTGCAATGTTCTGATTAAAAACCGCACGAG 141
                                                                                   

consensus_12988#1      CGAGG--CGCTTTTGTCTATTTTCTCCCCCTTTTGCCCCTGGTAAATAAAAACTACAACT 165
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      TTATGACCATTTTCACACAAATCCACAAAATTCATCGCATGGAAATTTTATCTCGTCACA 1560
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      TTTCAATTATTAAGTCAATACTGCTCAGTTCTACATGCTTGGATATAATGTACAGCAACA 201
                                                                                   

consensus_12988#1      CGCATGAATTATGGTTGTTCTTTTCCGTGTGGGCATAACTGAAGGGTAAGAAAATCATCT 225
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      TTCCAATAATGTTCATGCTCTCGATCAACTTCGGACAATTAAAAATAAAGCAAACAGCAC 1620
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      CTAAATCACCAACATTGTACTGAATAATACACTAAATCCCAAATGCATAATGAA--AGTT 259
                                                                                   

consensus_12988#1      ACCCCCTTTTGTAGGTCCCTTTGATCCACTCCTATGAATAAATGGCAGTTTTTTTTTTTT 285
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      CTCACAGTTTGTGAAAAAGATGATGGCGTCACTACCTTACACTTGTCAATCACAAAGTCC 1680
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      TTCTTATTTTCTGAATCGTCTTGGCATTGAACTGTCTATGATGTGAGGAATTTAAAAGGT 319
                                                                                   

consensus_12988#1      CTTATTGTTATTTAGTTCTTGACATTTCCTTGTCCCTCGTTTTCAGCTGATTTCAGCGAT 345
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      TTCGCCATACTTTGACCTATCATTGTTTCGG---TATGATGAGAAGCTGATTTCAGCGAT 1737
consensus_12988#4      --------GGGTCGACC---CACGGCGTCCG---CACCACGCG--TCCGGTT---ACTAG 41
consensus_12988#2      ATCCCTGTATTACCCTTAAGCCTTGAACCTTGTGAGCTTGAGCAGTCTTCCAGTAAGGGC 379
                                                                                   

consensus_12988#1      TGATCGGCACAGACACTGTACAGAGCATCCAATAAAATTTATATCA-GTGAAG--CAGCC 402
consensus_12988#3      ------------------------------------------------------------
consensus_12988#0      TGATCGGCACAGACACTGTACAGAGCATCCAATAAAATTTATATCA-GTGAAA--CAGCC 1794
consensus_12988#4      TGGTCTGTG-----GCCGATCAAATCGGCTGG-AGAATTTATATCAAGTGGAAACTAGCC 95
consensus_12988#2      CTTTTTTTATGTCTGCTTTCTATTAACACCAGGACAAGTGGTTTGCTTGTGAAAATTGTA 439
                                                                                   

consensus_12988#1      AAATGTTGTCAAA-TTCA--AGATAAAACC--AGGTTC-AGATT-CTGGTGCTT-CTGAC 454
consensus_12988#3      -----------------T--AGATGAA----------C-ANCAT-CTGGTGCTT-CTGAC 28
consensus_12988#0      AAATGTTGTCAAA-TTCA--AGATAAAACC--AGGTTC-AGATT-CTGGTGCTT-CTGAC 1846
consensus_12988#4      AAATGTTGTCAAAATTCAT-AGATANAAACCAAGGTTCTAGATT-CTGGTGCNTTCTGAC 153
consensus_12988#2      GAATGAGCCAGATCTTTGTTACGGAAAGCTAGAGGTGTGAAATTACTAGTTGATGATCTT 499
                                           *     *            *   * ** **   *  *   

consensus_12988#1      A-GCAGGG-C-AAAAAGAATATC--TTCCTTCTTGTTTCA---CCCATTTTTCC----C- 501
consensus_12988#3      A-GCAGGGGC-AAAAAGAAATAT--CTCCTTCTTGTTTCA---CCCATTTTTCC----C- 76
consensus_12988#0      A-GCAGGGC--AAAAAGAATATC--TTCCTTCTTGTTTCA---CCCATTTTTCC----C- 1893
consensus_12988#4      AAGCAGGGCCAAAAGAGAATATCG-TTCCTTCTTGTTTCAACACCAATTTTTCCACTCC- 211
consensus_12988#2      GGATATTTCTTGAAATCCACATTTATTTAATGTTATCTTA----CTATTTATATATGGCA 555
                           *       **    *       *   * ** * * *    * **** *      * 

consensus_12988#1      TCTCGCACTTTCTATTC-AGCAGACATATATGCAGCCAACTGTTGTCAATT-TACATTT- 558
consensus_12988#3      TCTCGCACTTTCTATTC-AGCAGACATATATGCAGCCAACTGTTGTCAATT-TACATTT- 133
consensus_12988#0      TCTCGCACTTTCTATTC-AGCAGACATATATGCAGCCAACTGTTGTCAATT-TACATTT- 1950
consensus_12988#4      NTCTGCACTTTCTATTCGAGCAGACATATATGCAGCCAACTGTTGTCAATT-TACATTT- 269
consensus_12988#2      TAAGGCATATGCTAACTAATTTGTGATGCTGACTTTTGGTAAATGCCTGCTCTATATTTA 615
                           ***  * ***    *   *  **     *          ** *   * ** **** 

consensus_12988#1      -CAGG-AGATAGAA-CGATATTGCCGTTCCCTCAATTGTATTTGTA-ACAGTTGTGA-GC 613
consensus_12988#3      -CAGGGAGATAGAAACGATATTGCCGTTCCCTCAATTGTATTTGTTTACAGTTGTGNAGC 192
consensus_12988#0      -CAGG-AGATAGAA-CGATATTGCCGTTCCCTCAATTGTATTTGTA-ACAGTTGTGA-GC 2005
consensus_12988#4      -CAGG-AGATAGAA-CGATATTGCCGTTCCCTCAATTGTATTTGTA-ACAGTTGTGA-GC 324
consensus_12988#2      GCAGTTTGTTAAAA-AGATGATGGCGT-CACTACCTTACACTTGT---CAATCACAAAGT 670
                        ***   * ** **  ***  ** *** * **   **  * ****   ** *      * 

consensus_12988#1      GGTGCACAGCTCA-GTAAAAATTTTGG-CCGCTTGTAGT-AGGATGTTTTATCGGC---A 667
consensus_12988#3      GGTGCACAGCTCAANTAAAAATTTTGGGNCGCCTGTNATTAGGATGTTTTATCGGCC--A 250
consensus_12988#0      GGTGCACAGCTCA-GTAAAAATTTTGG-CCGCTTGTAGT-AGGATGTTTTATCGGC---A 2059
consensus_12988#4      GGTGCACAGCTCA-GTAAAAATTTTGG-CCGCCTGTAAA-AAAAAAA------------- 368
consensus_12988#2      CCTTCACCATACTTTGACCTATCATTGTTTCGGTATGATAAGGTACACTCTTCAACTTGT 730
                         * ***    *    *   **  * *      * *    *                   

consensus_12988#1      AAGATCTTATTATAGG--CAAAGGAAAAATGTGGGTTT--AGGTTCTCCTTGCTTCGAGT 723
consensus_12988#3      AAGATCTTATTATANGGCCAAAGGAAAAATGTGGGTTTTAAGGTTCTCCTTGCTTCNAAT 310
consensus_12988#0      AAGATCTTATTATAGG--CAAAGGAAAAATGTGGGTAAAAAAACTCGAGACTAGTT---- 2113
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      TTGAAATAACTATACA--TCAGACAGCAGTTGATATTTTCAAAATTTCACAGTTTACAGT 788
                                                                                   

consensus_12988#1      -ATGCTGGAA-TGTACATTTT-GTA--GGAATATGG-CTGTCTGAA-GGTAAATGTAGTT 776
consensus_12988#3      TATGCTGGAAATATACATTTTTGTTATGAAATATGGGCTGTCTGAAAGGTAAATGTTANT 370
consensus_12988#0      ------------------------------------------------------------
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      CAAGTTCAAA-------------------------------------------------- 798
                                                                                   

consensus_12988#1      CATCTAAAAAAGGAAGGTAAAATAGAGTTAACAAAATGAGCTTTTATTTTGAATTCAAAA 836
consensus_12988#3      T----------------------------------------------------------- 371
consensus_12988#0      ------------------------------------------------------------
consensus_12988#4      ------------------------------------------------------------
consensus_12988#2      ------------------------------------------------------------
                                                                                   

consensus_12988#1      AAAAAA 842
consensus_12988#3      ------
consensus_12988#0      ------
consensus_12988#4      ------
consensus_12988#2      ------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)