These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12994#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2210 fasta sequence [AAGGTGGCCCTTTTCTCGGCTTCTCGCTGCTCTTGCTTTGCTTCGCTTCTCCTCCTCTTCCTCCTCCTTCCTCGGCGGCTGCTCCGGCTCGGATTCCGGTGAGCCGTCGCGTTCGTGGTACGGCGGAGGAAGCGAGGTTGCGCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGAGATCAAAAGCAGCTATTGGATTTCTCAGAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAAGCACTGAAGAGAGGACCATTCAGAACTATGATGGACCAGGAATCACCACAAGACTCAATCCGATGAAAACCAGGCTGTCTGATAATCAGGAGAGACCAAGATACCTACGTGACTCATTCAGATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAAGGCAAACGTTGTTGGCAGGGGTAGACATTGCTGAAAGTAGCAGCAGAAATGCTGGGGGCAAACATCTGGAGGGTAGTAATAAGAGAATCGTTGTCGATGATAGGAGTTCAGATGTTCTGCATACTGAAACAGAAGGCTTGGCTACTGAACAAGACCAATTGATAGCACCCAATGCTGGAGTTTCTGATTCTGCTAGTTCGTCAGATATTTCTGAACATGCAGTTGAATCCTTGGTAAGGAGTGCTGCTCCAAGTTCTAGAACCCGTAGACAGAAGGACAAAGAATTGAATTTGGGTCAATCAGGAGTTTGCTCTTCGTCATGTACTAACAGGCCTACTATATCAAGATATGCTCCTGCCGATGTGAAGCGACCGTGTAATCATGCTAGCGGAGTACAACAGCATGGTCATAACAATCTGGACTGTACTTCAGTACCTAATTTTCTGCCATCAGGTTGCTCATCTGGTTCTGTTTATAGCAGGAGGTTTGATGCAATGAGAAAAAGGACTTCTGATGGGGGAAGTTTTTCTAGATCAAGGGGCTTAAGTGGAACGGCTAGCTTAGACGATTCACCTCCTGCATACCCTGCCATTGCTGGTCCTAGAATCAGAACAACTACAACTGAACGGGCTTCACAACAAAATGCACTAAGAAGCAGAAGGAATTTTCAGGATTCAGCAGTGTCAGTAAGGACAAGAAGACCTCCTTGGGGTGCTAGGTTCAGGATCTCTGAGGAAAGAGAGGATGGCATGATTTCTCAGCGTGATTCTTCCATAGGGAATCAACAGTCAGATCAGGTGCATTCATCTTCGGAAGAGGCCTCTACAGAGAGCTCCTCAAGACCATTCTCTGCAGAATTACCTCATGCAATTTACTCATCTAGAGGAGAGGGATCAAATGCTTTCACTGCAAGGAGAAGAAGATCAAGCTCCCTTTATGAGGAAAGACCTCCACAGACATTCCATGATCTTTTCAGAGAAAGAAATGGCCGAAGACACATATCCATAGAAGGAATTGCAGAGGTATTACTAGCTCTGGACAGGATTGAACAAGAAGCAGAACTGACTTATGAGCAATTGATGGTGTTGGAGACAAATATATTGCTTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA-GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTGTTCACTCCAATTTGTGATTATCAAATCAGCTGTGCTCTGAAAACAAAAAAAAAACTTCAATGGTTCTCATGGTTAAAAAAAAAAGCTTTTCTATG] [+] EMBL CB647335 [AAGGTGGCCCTTTTCTCGGCTTCTCGCTGCTCTTGCTTTGCTTCGCTTCTCCTCCTCTTCCTCCTCCTTCCTCGGCGGCTGCTCCGGCTCGGATTCCGGTGAGCCGTCGCGTTCGTGGTACGGCGGAGGAAGCGAGGTTGCGCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGAGATCAAAAGCAGCTATTGGATTTCTCAGAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAAGCACTGAAGAGAGGACCATTCAGAACTATGATGGACCAGGAATCACCACAAGACTCAATCCGATGAAAACCAGGCTGTCTGATAATCAGGAGAGACCAAGATACCTACGTGACTCATTCAGATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAAGGCAAACGTTGTTGGCAGGGGTAGACATTGCTGAAAGTAGCAGCAGAAATGCTGGGGGCAAACATCTGGAGGGTAGTAATAAGAGAATCGTTGTCGATGATAGGAGTTCAGATGTTCTGCATACTGAAACAGAAGGCTTGGCTACTGAACAAGACCAATTGATAGCACCCAATGCTGGAGTTTCTGATTCTGCTAGTTCGTCAGATATTTCTGAACATGCAGTTGAATCCTTGGTAAG ] [+] EMBL CB627815 [ TTCTCCGCTTCTCTCTGCTCTTGCTTTGCTTCGCTTCTCCTCCTCTTCCTCCTCCTTCCTCGGCGGCTGCTCCGGCTCGGATTCCGGTGAGCCGTCGCGTTCGTGGTACGGCGGAGGAAGCGAGGTTGCGCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTTGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCAC ] [+] EMBL CB654489 [ GCTTTGCTTCGCTTCTCCTCCTCTTCCTCCTCCTTCCTCGGCGGCTGCTCCGGCTCGGATTCCGGTGAGCCGTCGCGTTCGTGGTACGGCGGAGGAAGCGAGGTTGCGCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGAGATCAAAAGCAGCTATTGGATTTCTCAGAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAAGCACTGAAGAGAGGACCATTCAGAACTATGATGGACCAGGAATCACCACAAGACTCAATCCGATGAAAACCAGGCTGTCTGATAATCAGGAGAGACCAAGATACCTACGTGACTCATTCAGATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAAGGCAAACGTTGTTGGCAGGGGTAGACATTGCTGAAAGTAGCAGCAGAAATGCTGGGGGCAAACATCTGGAGGGTAGTAATAAGAGAATCGTTGTCGATGATAGGAGTTCAGATGTTCTGCATACTGAAACAGAAGGCTTGGCTACTGAACAAGACCAATTGATAGCACCCAATGCTGGAGTTTCTGATTCTGCTAGTTCGTCAGATATTTCTGAACATGCAGTTGAATCCTTGGTAAGGAGTGCTGC ] [+] EMBL AK120070 [ TTTGCTTCGCTTCTCCTCCTCTTCCTCCTCCTTCCTCGGCGGCTGCTCCGGCTCGGATTCCGGTGAGCCGTCGCGTTCGTGGTACGGCGGAGGAAGCGAGGTTGCGCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGAGATCAAAAGCAGCTATTGGATTTCTCAGAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAAGCACTGAAGAGAGGACCATTCAGAACTATGATGGACCAGGAATCACCACAAGACTCAATCCGATGAAAACCAGGCTGTCTGATAATCAGGAGAGACCAAGATACCTACGTGACTCATTCAGATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAAGGCAAACGTTGTTGGCAGGGGTAGACATTGCTGAAAGTAGCAGCAGAAATGCTGGGGGCAAACATCTGGAGGGTAGTAATAAGAGAATCGTTGTCGATGATAGGAGTTCAGATGTTCTGCATACTGAAACAGAAGGCTTGGCTACTGAACAAGACCAATTGATAGCACCCAATGCTGGAGTTTCTGATTCTGCTAGTTCGTCAGATATTTCTGAACATGCAGTTGAATCCTTGGTAAGGAGTGCTGCTCCAAGTTCTAGAACCCGTAGACAGAAGGACAAAGAATTGAATTTGGGTCAATCAGGAGTTTGCTCTTCGTCATGTACTAACAGGCCTACTATATCAAGATATGCTCCTGCCGATGTGAAGCGACCGTGTAATCATGCTAGCGGAGTACAACAGCATGGTCATAACAATCTGGACTGTACTTCAGTACCTAATTTTCTGCCATCAGGTTGCTCATCTGGTTCTGTTTATAGCAGGAGGTTTGATGCAATGAGAAAAAGGACTTCTGATGGGGGAAGTTTTTCTAGATCAAGGGGCTTAAGTGGAACGGCTAGCTTAGACGATTCACCTCCTGCATACCCTGCCATTGCTGGTCCTAGAATCAGAACAACTACAACTGAACGGGCTTCACAACAAAATGCACTAAGAAGCAGAAGGAATTTTCAGGATTCAGCAGTGTCAGTAAGGACAAGAAGACCTCCTTGGGGTGCTAGGTTCAGGATCTCTGAGGAAAGAGAGGATGGCATGATTTCTCAGCGTGATTCTTCCATAGGGAATCAACAGTCAGATCAGGTGCATTCATCTTCGGAAGAGGCCTCTACAGAGAGCTCCTCAAGACCATTCTCTGCAGAATTACCTCATGCAATTTACTCATCTAGAGGAGAGGGATCAAATGCTTTCACTGCAAGGAGAAGAAGATCAAGCTCCCTTTATGAGGAAAGACCTCCACAGACATTCCATGATCTTTTCAGAGAAAGAAATGGCCGAAGACACATATCCATAGAAGGAATTGCAGAGGTATTACTAGCTCTGGACAGGATTGAACAAGAAGCAGAACTGACTTATGAGCAATTGATGGTGTTGGAGACAAATATATTGCTTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTGTTCACTCCAATTTGTGATTATCAAATCAGC ] [+] EMBL CB636624 [ GCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGATATCAAAAGCATCTATTGGATTTCTCACAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAATCACTGAACAGAGGACCATTCATAACTATGATGGACCAGGAATCACCACAAAACTCAGTCCGATGAAAACCAGGCTGTCTGATAATCAAGAGAGACCAAGATTCCTACGTGACTCATTCACATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAATGCAAACGTTG ] [+] EMBL CB636626 [ GCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGAGATCAAAAGCAGCTATTGGATTTCTCAGAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAAGCACTGAAGAGAGGACCATTCAGAACTATGATGGACCAGGAATCACCACAAGACTCAATCCGATGAAAACCAGGCTGTCTGATAATCAGGAGAGACCAAGATACCTACGTGACTCATTCAGATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAAGGCAAACGTTGTTGGCAGGGGTAGACATTGCTGAAAGTAGCAGCAGAAATGCTGGGGGCAAACATCTGGAGGGTAGTAATAAGAGAATCGTTGTCGATGATAGGAGTTCAGATGTTCTGCATACTGAAACAGAAGGCTTGGCTACTGAACAAGACCAATTGATAGCACCCAATGCTGGAGTTT ] [-] EMBL CB654490 [ CAACAGTCAGATCAGGTGCATTCATCTTCGGAAGAGGCCTCTACAGAGAGCTCCTCAAGACCATTCTCTGCAGAATTACCTCATGCAATTTACTCATCTAGAGGAGAGGGATCAAATGCTTTCACTGCAAGGAGAAGAAGATCAAGCTCCCTTTATGAGGAAAGACCTCCACAGACATTCCATGATCTTTTCAGAGAAAGAAATGGCCGAAGACACATATCCATAGAAGGAATTGCAGAGGTATTACTAGCTCTGGACAGGATTGAACAAGAAGCAGAACTGACTTATGAGCAATTGATGGTGTTGGAGACAAATATATTGCTTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTGTTCACTCCAAGTTGTGATTATCAAATCAGCTGTGCTCTGAAAA ] [-] EMBL CB647336 [ CTACAGAGAGCTCCTCAAGACCATTCTCTGCAGAATTACCTCATGCAATTTACTCATCTAGAGGAGAGGGATCAAATGCTTTCACTGCAAGGAGAAGAAGATCAAGCTCCCTTTATGAGGAAAGACCTCCACAGACATTCCATGATCTTTTCAGAGAAAGAAATGGCCGAAGACACATATCCATAGAAGGAATTGCAGAGGTATTACTAGCTCTGGACAGGATTGAACAAGAAGCAGAACTGACTTATGAGCAATTGATGGTGTTGGAGACAAATATATTGCTTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTGTTCACTCCAGTTTGTGATTATCAAATCAGCTGTGCTCTGAAAACAAAAAAAAAA ] [-] EMBL CB627816 [ ACTCATCTAGAGTAGAGGGATCAAATGCTTTCACTGCAAGGAGAAGAAGATCAAGCTCCCTTTATGAGGAAAGACCTCCACAGACATTCCATGATCTTTTCAGAGAAAGAAATGGCCAAAGACACATATCCATAGAAGGAATTGCAGAGGTATTACTAGCTCTGGACAGGATTGAACAAGAAGCAGAACTGACTTATGAGCAATTGATGGTGTTGGAGACAAATATATTGCTTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAGCATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTATTCACTCCAATTTGTGATTATCAAATCAGCTGTGCTCTGAAAACAAAAATAATCCTTCAATGGTTCTCATGGTTAAAAAAAAAAGCTTTTCTATG] [-] EMBL CB636627 [ gtgTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCAATCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCC TCTTTTTGTGGAAACTGTAAATAATaatg ] [-] EMBL CB636625 [ ATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCC TCTTTTTGTGGAAACTGTAAATAATCTT ] [+] EMBL BI812106 [ AGTATATATATACCACGTGGCTACCAAAGCCAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCCATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTGTTCACTCC ATTTGTGATTATCAAATCAGCTGTGCTCTGAAAACCAAAAAAAAAa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||