cluster # 13001

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13001 cluster # 13001 Sequences # 12 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13001#0 length = 1426 sequences # 6
consensus_13001#1 length = 963 sequences # 2
consensus_13001#2 length = 929 sequences # 1

consensus_13001#3 length = 822 sequences # 1
consensus_13001#4 length = 769 sequences # 1
consensus_13001#5 length = 661 sequences # 1

consensusID : consensus_13001#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1426
fasta sequence

                              [TCCTCATCTCACATCGTCTCTATAGCTACCTACCTTCATCTCTCTCTAGAGCTAGAGCTAGCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGTTGGCGTGGTGGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCTCCCTGGGCTCCGGCGGCCACAGGCGGCAGAGAGAAAGTAGAGACGAAGCGCCGTCGTCGGCGGCGGCGTCCCTGCTGACGCTGAGGCTCCCGGCAGAGAGCGGGGGGCAGCCGCAGGTGGTGGTGAAGAGGGAGGTGGTGCGGGCGGAAGAGGAGGAGTACGAATACGAGTACGAGAGGGCGCTCTACTCGTCGTCGGCTGCGGCGGCGGACGACGACGAGGGCTGCAACAGCCGGAAGAAGCTGAGGCTGAGCAAGGAGCAGTCGGCTCTGCTGGAGGATCGCTTCAAGGAGCATAGCACTCTCAACCCTAAGCAAAAGGTTGCTTTGGCGAAGCAGCTAAACCTGAGGCCAAGGCAAGTTGAGGTGTGGTTCCAAAACAGAAGAGCCAGGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCCACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCGCCACCGCCGCCGCCGCCGGAGCTTCCCCCACCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATGTATATTGATTTGTTTAAAAAAAAAAAAGA]

[+] EMBL CB655681             [TCCTCATCTCACATCGTCTCTATAGCTACCTACCTTCATCTCTCTCTAGAGCTAGAGCTAGCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGTTGGCGTGGTGGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCTCCCTGGGCTCCGGCGGCCACAGGCGGCAGAGAGAAAGTAGAGACGAAGCGCCGTCGTCGGCGGCGGCGTCCCTGCTGACGCTGAGGCTCCCGGCAGAGAGCGGGGGGCAGCCGCAGGTGGTGGTGAAGAGGGAGGTGGTGCGGGCGGAAGAGGAGGAGTACGAATACGAGTACGAGAGGGCGCTCTACTCGTCGTCGGCTGCGGCGGCGGACGACGACGAGGGCTGCAACAGCCGGAAGAAGCTGAGGCTGAGCAAGGAGCAGTCGGCTCTGCTGGAGGATCGCTTCAAGGAGCATAGCACTCTCAACCCTAAGCAAAAGGTTGCTTTGGCGAAGCAGCTAAACCTGAGGCCAAGGCAAGTTGAGGTGTGGTTCCAAAACAGAAGAGCCAGGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCCACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCGCCACCGCCGCCGCCGCCGGAGCTTCCCCCACCGCCGCCGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB658016             [         CACATCGTCTCTATAGCTACCTACCTTCATCTCTCTCTAGAGCTAGAGCTAGCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGTTGGCGTGGTGGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCTCCCTGGGCTCCGGCGGCCACAGGCGGCAGAGAGAAAGTAGAGACGAAGCGCCGTCGTCGGCGGCGGCGTCCCTGCTGACGCTGAGGCTCCCGGCAGAGAGCGGGGGGCAGCCGCAGGTGGTGGTGAAGAGGGAGGTGGTGCGGGCGGAAGAGGAGGAGTACGAATACGAGTACGAGAGGGCGCTCTACTCGTCGTCGGCTGCGGCGGCGGACGACGACGAGGGCTGCAACAGCCGGAAGAAGCTGAGGCTGAGCAAGGAGCAGTCGGCTCTGCTGGAGGATCGCTTCAAGGAGCATAGCACTCTCAACCCTAAGCAAAAGGTTGCTTTGGCGAAGCAGCTAAACCTGAGGCCAAGGCAAGTTGAGGTGTGGTTCCAAAACAGAAGAGCCAGGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCCACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCGCCACCGCCGCCGCCGCCGGAGCTTCCCCCACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB671046             [                                CCTTCATCTCTCTCTAGAGCTAGAGCTAGCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGTTGGCGTGGTGGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCTCCCTGGGCTCCGGCGGCCACAGGCGGCAGAGAGAAAGTAGAGACGAAGCGCCGTCGTCGGCGGCGGCGTCCCTGCTGACGCTGAGGCTCCCGGCAGAGAGCGGGGGGCAGCCGCAGGTGGTGGTGAAGAGGGAGGTGGTGCGGGCGGAAGAGGAGGAGTACGAATACGAGTACGAGAGGGCGCTCTACTCGTCGTCGGCTGCGGCGGCGGACGACGACGAGGGCTGCAACAGCCGGAAGAAGCTGATGCTGAGCAAGGAGCAGTCGGCTCTGCTGGAGGATCGCTTCGAGGAGCATAGCACTCTCTACCCTAAGCAAAAGGTTGCTTTGGCGAATCAGCTAAACCTGAGGCCAAGGCAAGTTGAGGTGTGGTTCCGAAACAGAACAGCCATGACTAAGCTGAAGCACACGGAAGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTTACTGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCCACGCTCTCCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB671047             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCCACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCGCCACCGCCGCCGCCGCCGGAGCTTCCCCCACCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATGTATATT                       ]
[-] EMBL CB658017             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACCCTCCCCGTCCCCGCCGCCACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCGCCACCGCCGCCGCCGCCGGAGCTTCCCCCACCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATG                             ]
[-] EMBL CB655682             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CACCGCCGCCGCCGCCGGAGCTTCCCCCACCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATGTATATTGATTTGTTTAAAAAAAAAAAAGA]




>consensus_13001#0
TCCTCATCTCACATCGTCTCTATAGCTACCTACCTTCATCTCTCTCTAGAGCTAGAGCTA
GCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGTTGGCGTGGTGGATG
GCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCTCCCTGGGCTCCGGCGGCCAC
AGGCGGCAGAGAGAAAGTAGAGACGAAGCGCCGTCGTCGGCGGCGGCGTCCCTGCTGACG
CTGAGGCTCCCGGCAGAGAGCGGGGGGCAGCCGCAGGTGGTGGTGAAGAGGGAGGTGGTG
CGGGCGGAAGAGGAGGAGTACGAATACGAGTACGAGAGGGCGCTCTACTCGTCGTCGGCT
GCGGCGGCGGACGACGACGAGGGCTGCAACAGCCGGAAGAAGCTGAGGCTGAGCAAGGAG
CAGTCGGCTCTGCTGGAGGATCGCTTCAAGGAGCATAGCACTCTCAACCCTAAGCAAAAG
GTTGCTTTGGCGAAGCAGCTAAACCTGAGGCCAAGGCAAGTTGAGGTGTGGTTCCAAAAC
AGAAGAGCCAGGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGC
TGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCT
CTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCC
ACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCGCCACCGCCGCCGCCGCCGGAGCTTCC
CCCACCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGCCCTTTC
GCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGC
ATGCTAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATATATAGTT
TATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTAAATATATATG
GCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTG
CTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGA
GCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGT
TGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGG
GGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTC
ACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGA
AATATTATATATCAATGTATATTGATTTGTTTAAAAAAAAAAAAGA

consensusID : consensus_13001#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 963
fasta sequence

                              [ATTGACTAATATATTAATTAATATAATGTAATTTATATAGGAGGTAGTATAACCTAGGCATCCCGTTTGCAAGCATGCATATATATACAAGACAGACAGACATATTACACATGGAGTAGTAGTAGTTGAAGAAGAATATGCATGATAATTAATATAGAGAAGCTCGATCGGTCAAGTGCAGGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATGTATATTGATTTGTTTAATTCTTCAGAGATTAAAAAACAAAAAAAAAGGAA]

[+] EMBL AK060176             [ATTGACTAATATATTAATTAATATAATGTAATTTATATAGGAGGTAGTATAACCTAGGCATCCCGTTTGCAAGCATGCATATATATACAAGACAGACAGACATATTACACATGGAGTAGTAGTAGTTGAAGAAGAATATGCATGATAATTAATATAGAGAAGCTCGATCGGTCAAGTGCAGGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATGTATATTGATTTGTTTAATTC                              ]
[-] EMBL CB678543             [                                                                                                                                                                                                                                                                                                                                        CACCGCCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGTTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGCGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCAGGCATGCTTGCATTTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATAGATCAGCTGGGTCTTTCATGCACATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCGCAAGTTAATTAATGTGTGAGGAGGATGGGCTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGGGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACCCACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATGTATATTGATTTGTTTAATTCTTCAGAGATTAAAAAACAAAAAAAAAGGAA]




>consensus_13001#1
ATTGACTAATATATTAATTAATATAATGTAATTTATATAGGAGGTAGTATAACCTAGGCA
TCCCGTTTGCAAGCATGCATATATATACAAGACAGACAGACATATTACACATGGAGTAGT
AGTAGTTGAAGAAGAATATGCATGATAATTAATATAGAGAAGCTCGATCGGTCAAGTGCA
GGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGC
TGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACT
CCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGCCCTTTCGCCA
AGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGC
TAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATATATAGTTTATA
GTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTAAATATATATGGCTA
TAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTT
AATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCAC
TGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGT
TTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAG
TTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACAC
ACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATA
TTATATATCAATGTATATTGATTTGTTTAATTCTTCAGAGATTAAAAAACAAAAAAAAAG
GAA

consensusID : consensus_13001#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 929
fasta sequence

                              [TCTCCCTCTTCTCTTCTTCCTCATCTCACATCGTCTCTATAGCTACCTACCTTCATCTCTCTCTAGAGCTAGAGCTAGCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGTTGGCGTGGTGGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCTCCCTGGGCTCCGGCGGCCACAGGCGGCAGAGAGAAAGTAGAGACGAAGCGCCGTCGTCGGCGGCGGCGTCCCTGCTGACGCTGAGGCTCCCGGCAGAGAGCGGGGGGCAGCCGCAGGTGGTGGTGAAGAGGGAGGTGGTGCGGGCGGAAGAGGAGGAGTACGAATACGAGTACGAGAGGGCGCTCTACTCGTCGTCGTCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCGTGCTTGCATCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATGTATAT]

[+] EMBL AK099568             [TCTCCCTCTTCTCTTCTTCCTCATCTCACATCGTCTCTATAGCTACCTACCTTCATCTCTCTCTAGAGCTAGAGCTAGCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGTTGGCGTGGTGGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCTCCCTGGGCTCCGGCGGCCACAGGCGGCAGAGAGAAAGTAGAGACGAAGCGCCGTCGTCGGCGGCGGCGTCCCTGCTGACGCTGAGGCTCCCGGCAGAGAGCGGGGGGCAGCCGCAGGTGGTGGTGAAGAGGGAGGTGGTGCGGGCGGAAGAGGAGGAGTACGAATACGAGTACGAGAGGGCGCTCTACTCGTCGTCGTCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCGTGCTTGCATCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATGTATAT]




>consensus_13001#2
TCTCCCTCTTCTCTTCTTCCTCATCTCACATCGTCTCTATAGCTACCTACCTTCATCTCT
CTCTAGAGCTAGAGCTAGCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGT
TGTTGGCGTGGTGGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCTCCC
TGGGCTCCGGCGGCCACAGGCGGCAGAGAGAAAGTAGAGACGAAGCGCCGTCGTCGGCGG
CGGCGTCCCTGCTGACGCTGAGGCTCCCGGCAGAGAGCGGGGGGCAGCCGCAGGTGGTGG
TGAAGAGGGAGGTGGTGCGGGCGGAAGAGGAGGAGTACGAATACGAGTACGAGAGGGCGC
TCTACTCGTCGTCGTCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTG
CATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGTGTGTAGTGTACATATA
TATAGTTTATAGTAGTACATATATTAATTCTTGCATGCGTGCTTGCATCTAGTAGTAAAT
ATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACC
CCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGAT
GGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTC
AAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTAT
TGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAG
CTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTG
TTTCAGAAATATTATATATCAATGTATAT

consensusID : consensus_13001#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 822
fasta sequence

                              [CCCTCTTCTCTTCTTCCTCATCTCACATCGTCTCTATAGCTACCTACCTTCATCTCTCTCTAGAGCTAGAGCTAGCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGTTGGCGTGGTGGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCGCCACCGCCGCCGCCGCCGGAGCTTCCCCCACCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCTGTGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATGTATAT]

[+] EMBL AK066743             [CCCTCTTCTCTTCTTCCTCATCTCACATCGTCTCTATAGCTACCTACCTTCATCTCTCTCTAGAGCTAGAGCTAGCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGTTGGCGTGGTGGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCGCCACCGCCGCCGCCGCCGGAGCTTCCCCCACCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCTGTGTGTAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGATTTGTTTCAGAAATATTATATATCAATGTATAT]




>consensus_13001#3
CCCTCTTCTCTTCTTCCTCATCTCACATCGTCTCTATAGCTACCTACCTTCATCTCTCTC
TAGAGCTAGAGCTAGCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGT
TGGCGTGGTGGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCGCCACCG
CCGCCGCCGCCGGAGCTTCCCCCACCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCC
CGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCGATCAT
CATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCTGTGTG
TAGTGTACATATATATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCA
TCTAGTAGTAAATATATATGGCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCAT
GCATATGTTCACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAAT
GTGTGAGGAGGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAAC
AAAATTTTAATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGG
TGATGAATTTTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACA
CCTAGCTAGCTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTA
TTATATTGATTTGTTTCAGAAATATTATATATCAATGTATAT

consensusID : consensus_13001#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 769
fasta sequence

                              [TGGAGCCTAAGCAAAAGGTTGCTTTGGCGAAGCAGCTAAACCTGAGGCCAAGGCAAGTTGAGGTGTGGTTCCAAAACAGAAGAGCCAGGTTAGTTTAGTTGGTCATATTCACCTCTAACTCTCTATCCACTTCCTTAGCTTCCTTCTGTCGACTTGTCTATTCTTTTTTTCCCCCTTTTTGCCATATAAAATCATTTATTCACATGTCTTTTCATTTTGCAACCAAATTTATTAATTGGTAAATATATTAATTTTCAAAAAAGAAAATCCGTATCCGGCCCTCTCCCTTTTTATTATATATATGCATGCATGCATGTTTGTGCAACAACTAATAATCAAGTAGTGCAGTGGATGTATCCAATGGCGAACTCAGAACAAAAGTTACCGATGGTCCAATACATACTAATTATCTAATTATTGACTAATATATTAATTAATATAATGTAATTTATATAGGAGGTAGTATAACCTAGGCATCCCGTTTGCAAGCATGCATATATATACAAGACAGACAGACATATTACACATGGAGTAGTAGTAGTTGAAGAAGAATATGCATGATAATTAATATAGAGAAGCTCGATCGGTCAAGTGCAGGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCCACG]

[+] EMBL CB678542             [TGGAGCCTAAGCAAAAGGTTGCTTTGGCGAAGCAGCTAAACCTGAGGCCAAGGCAAGTTGAGGTGTGGTTCCAAAACAGAAGAGCCAGGTTAGTTTAGTTGGTCATATTCACCTCTAACTCTCTATCCACTTCCTTAGCTTCCTTCTGTCGACTTGTCTATTCTTTTTTTCCCCCTTTTTGCCATATAAAATCATTTATTCACATGTCTTTTCATTTTGCAACCAAATTTATTAATTGGTAAATATATTAATTTTCAAAAAAGAAAATCCGTATCCGGCCCTCTCCCTTTTTATTATATATATGCATGCATGCATGTTTGTGCAACAACTAATAATCAAGTAGTGCAGTGGATGTATCCAATGGCGAACTCAGAACAAAAGTTACCGATGGTCCAATACATACTAATTATCTAATTATTGACTAATATATTAATTAATATAATGTAATTTATATAGGAGGTAGTATAACCTAGGCATCCCGTTTGCAAGCATGCATATATATACAAGACAGACAGACATATTACACATGGAGTAGTAGTAGTTGAAGAAGAATATGCATGATAATTAATATAGAGAAGCTCGATCGGTCAAGTGCAGGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCCACG]




>consensus_13001#4
TGGAGCCTAAGCAAAAGGTTGCTTTGGCGAAGCAGCTAAACCTGAGGCCAAGGCAAGTTG
AGGTGTGGTTCCAAAACAGAAGAGCCAGGTTAGTTTAGTTGGTCATATTCACCTCTAACT
CTCTATCCACTTCCTTAGCTTCCTTCTGTCGACTTGTCTATTCTTTTTTTCCCCCTTTTT
GCCATATAAAATCATTTATTCACATGTCTTTTCATTTTGCAACCAAATTTATTAATTGGT
AAATATATTAATTTTCAAAAAAGAAAATCCGTATCCGGCCCTCTCCCTTTTTATTATATA
TATGCATGCATGCATGTTTGTGCAACAACTAATAATCAAGTAGTGCAGTGGATGTATCCA
ATGGCGAACTCAGAACAAAAGTTACCGATGGTCCAATACATACTAATTATCTAATTATTG
ACTAATATATTAATTAATATAATGTAATTTATATAGGAGGTAGTATAACCTAGGCATCCC
GTTTGCAAGCATGCATATATATACAAGACAGACAGACATATTACACATGGAGTAGTAGTA
GTTGAAGAAGAATATGCATGATAATTAATATAGAGAAGCTCGATCGGTCAAGTGCAGGAC
GAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGAC
GGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCAC
CGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCCACG

consensusID : consensus_13001#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 661
fasta sequence

                              [CACCTCCTTTCTATATATATATATATATGTGATGTATCCAATGGCGAACCCAGAACAAAAGTTACCGGTGGTCCAATACATACTAATTATCTAATTATTGGCTAATATATTAATTAATATAATGTAATTTGTATAGGAGGTAGTATAACCTAGGCATCCCGTTTGCAAGCATGCATATATATACAAGACAGACAGACATATTACACATGGAGTAGTAGTAGTTGAAGAAGAATATGCATGATAATTAATATAGAGAAGCTCGATCGGTCAAGTGCAGGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCCACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCGCCACCGCCGCCGGCGGCGGAGCTTCCCCCACCGCGCGGCGACCGCACCAACAAGCCCACCGTCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCTATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGT]

[+] EMBL BF430484             [CACCTCCTTTCTATATATATATATATATGTGATGTATCCAATGGCGAACCCAGAACAAAAGTTACCGGTGGTCCAATACATACTAATTATCTAATTATTGGCTAATATATTAATTAATATAATGTAATTTGTATAGGAGGTAGTATAACCTAGGCATCCCGTTTGCAAGCATGCATATATATACAAGACAGACAGACATATTACACATGGAGTAGTAGTAGTTGAAGAAGAATATGCATGATAATTAATATAGAGAAGCTCGATCGGTCAAGTGCAGGACGAAGCTGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCCGCCGCCACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCGCCACCGCCGCCGGCGGCGGAGCTTCCCCCACCGCGCGGCGACCGCACCAACAAGCCCACCGTCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCTATCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAGT]




>consensus_13001#5
CACCTCCTTTCTATATATATATATATATGTGATGTATCCAATGGCGAACCCAGAACAAAA
GTTACCGGTGGTCCAATACATACTAATTATCTAATTATTGGCTAATATATTAATTAATAT
AATGTAATTTGTATAGGAGGTAGTATAACCTAGGCATCCCGTTTGCAAGCATGCATATAT
ATACAAGACAGACAGACATATTACACATGGAGTAGTAGTAGTTGAAGAAGAATATGCATG
ATAATTAATATAGAGAAGCTCGATCGGTCAAGTGCAGGACGAAGCTGAAGCAGACGGAGG
TGGATTGCGAGCTTCTGAAGCGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCC
ATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGG
CCACCACCCTCCCCGTCCCCGCCGCCACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCG
CCACCGCCGCCGGCGGCGGAGCTTCCCCCACCGCGCGGCGACCGCACCAACAAGCCCACC
GTCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCTA
TCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAG
T

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13001#2      ------------------------------------------------------------
consensus_13001#3      ------------------------------------------------------------
consensus_13001#0      TCCTCATCTCACATCGTCTCTATAGCTACCTACCTTCATCTCTCTCTAGAGCTAGAGCTA 60
consensus_13001#1      ------------------------------------------------------------
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      ------------------------------------------------------------
consensus_13001#3      ------------------------------------------------------------
consensus_13001#0      GCACACAAGAGAGAGGGAGAGAGAGAGAGAGAGAGCGCTTGGTTGTTGGCGTGGTGGATG 120
consensus_13001#1      ------------------------------------------------------------
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      ------------------------------------------------------------
consensus_13001#3      ------------------------------------------------------------
consensus_13001#0      GCGCAAGATGATGAGGACGTGGGTCTAGCTCTGGGCCTCTCCCTGGGCTCCGGCGGCCAC 180
consensus_13001#1      ------------------------------------------------------------
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      ------------------------------------------------------------
consensus_13001#3      ------------------------------------------------------------
consensus_13001#0      AGGCGGCAGAGAGAAAGTAGAGACGAAGCGCCGTCGTCGGCGGCGGCGTCCCTGCTGACG 240
consensus_13001#1      ------------------------------------------------------------
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      ------------------------------------------------------------
consensus_13001#3      ------------------------------------------------------------
consensus_13001#0      CTGAGGCTCCCGGCAGAGAGCGGGGGGCAGCCGCAGGTGGTGGTGAAGAGGGAGGTGGTG 300
consensus_13001#1      ------------------------------------------------------------
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      ------------------------------------------------------------
consensus_13001#3      ------------------------------------------------------------
consensus_13001#0      CGGGCGGAAGAGGAGGAGTACGAATACGAGTACGAGAGGGCGCTCTACTCGTCGTCGGCT 360
consensus_13001#1      ------------------------------------------------------------
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      ------------------------------------------------------------
consensus_13001#3      ------------------------------------------------------------
consensus_13001#0      GCGGCGGCGGACGACGACGAGGGCTGCAACAGCCGGAAGAAGCTGAGGCTGAGCAAGGAG 420
consensus_13001#1      ------------------------------------------------------------
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      -----------------------------------TCTCCCTCTTC-TCTTCTTCCTCAT 24
consensus_13001#3      --------------------------------------CCCTCTTC-TCTTCTTCCTCAT 21
consensus_13001#0      CAGTCGGCTCTGCTGGAGGATCGCTTCAAGGAGCATAGCACTCTCAACCCTAAGCAAAAG 480
consensus_13001#1      --------------------------------------ATTGACTAATATATTAATTAAT 22
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      CTCACATCGTCTCTATAGC---TA--CCTACCTT--CATCTCTCTCTAGAGC-TAGAGCT 76
consensus_13001#3      CTCACATCGTCTCTATAGC---TA--CCTACCTT--CATCTCTCTCTAGAGC-TAGAGCT 73
consensus_13001#0      GTTGCTTTGGCGAAGCAGC---TAAACCTGAGGC--CAAGGCAAGTTGAGGTGTGGTTCC 535
consensus_13001#1      ATAATGTAATTTATATAGGAGGTAGTATAACCTAGGCATCCCGTTTGCAAGCATGCATAT 82
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      AGCACACAAGAGAGAGGGAGAGAG-AGAGAGAGAGAGCGCTTGGTTGTTGGCGT---GGT 132
consensus_13001#3      AGCACACAAGAGAGAGGGAGAGAG-AGAGAGAGAGAGCGCTTGGTTGTTGGCGT---GGT 129
consensus_13001#0      AAAACAGAAGAGCCAGGACGAAGC-TGAAGCAGACGGAGGTGGATTGCGAGCTTCTGAAG 594
consensus_13001#1      A-TATACAAGACAGACAGACATATTACACATGGAGTAGTAGTAGTTGAAGAAGA--ATAT 139
consensus_13001#4      ------------------TGGAGCCTAAGCAAAAGGTTGCTTTGGCGAAGCAGCTAAACC 42
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      GGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTC--------TGGGCCTCTCCCTGGG 184
consensus_13001#3      GGATGGCGCAAGATGATGAGGACGTGGGTCTAGCTC--------TGGGCCTC-------- 173
consensus_13001#0      CGCTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCATCGTGAGCTCCAGCAGCTC 654
consensus_13001#1      GCATGATAATTAATATAGAGAAGCTCGATCGGTCAAGTGCAGGACGAAGCTGAAGCAGAC 199
consensus_13001#4      TGAGGCCAAGGCAAGTTGAGG-TGTGGTTCCAAAACAGAAGAGCCAGGTTAGTTTAGTTG 101
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      CTCCGGCGGCCACAGGCGGCAGAGAGAAAGTAGAGACGAAGCGCCGTCGTCGGCGGCGGC 244
consensus_13001#3      --------GCCAC----------------------------CGCCGCCGCCGCCGGAGCT 197
consensus_13001#0      AGGGCTCTGACCCACTCCACCGCCGCCGGCTTCTTCATGGCCACCACCCTCCCCGTCCCC 714
consensus_13001#1      GGAGGTGGATTGCGAGCTTCTGA---AGCGCTGCTGCGAGACGCTGACGGAGG-AGAACC 255
consensus_13001#4      GTC--ATATTCACCTCTAACTCTCTATCCACTTCCTTAGCTTCCTTCTGTCGACTTGTCT 159
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      GTCCCTGCTGACGCTGAGGCTCCCGGCAGAGAGCGGGGGGCAGCCGCAGGTGGTGGTGAA 304
consensus_13001#3      TCCCCCACCGCCGCCGCCGACCGCACCAACAAGC------CCACCGC------------- 238
consensus_13001#0      GCCGCCACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCGCCACCGCCGCCGCCGCCGGA 774
consensus_13001#1      GACGCCTCCATCGTGAGCTCCAGCAGCTCAGGGCTCTGACCCACTCC------------- 302
consensus_13001#4      ATTCTTTTTTTCCCCCTTTTTGCCATATAAAATCATTTATTCACATGTCTTTTCATTTTG 219
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      GAGGGA---GGTGGTGCGGGCGGAAGAGGAGGAGTACGAATACGAGTACGAGAGGGCGCT 361
consensus_13001#3      ------------------------------------CCCGCACTTGTTCA-------GCC 255
consensus_13001#0      GCTTCCCCCACCGCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGC 834
consensus_13001#1      ------------GCCGCCGCCGACCGCACCAACAAGCCCACCGCCCCGCACTTGTTCAGC 350
consensus_13001#4      CAACCAA--------ATTTATTAATTGGTAAATATATTAATTTTCAAAAAAGAAAA-TCC 270
consensus_13001#5      ------------------------------------------------------------
                                                                                   

consensus_13001#2      CTACTCGTCGTCGTCGCCGCCTGCTAGCTAAATTAATC--TCGATCATCATCCTCTCCCT 419
consensus_13001#3      CT-TTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATC--TCGATCATCATCCTCTCCCT 312
consensus_13001#0      CCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATC--TCGATCATCATCCTCTCCCT 892
consensus_13001#1      CCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATC--TCGATCATCATCCTCTCCCT 408
consensus_13001#4      GTATCCGGCCCTCTCCCTTTTTATTATATATATGCATGCATGCATGTTTGTGCAACAACT 330
consensus_13001#5      ----------------------------------------------------CACCTCCT 8
                                                                           *     **

consensus_13001#2      GCATATGCATGCTAGCATGATTAAT-TAATTAATCATCATATCAGTGTGTAGTGTACATA 478
consensus_13001#3      GCATATGCATGCTAGCATGATTAAT-TAATTAATCATCATATCTGTGTGTAGTGTACATA 371
consensus_13001#0      GCATATGCATGCTAGCATGATTAAT-TAATTAATCATCATATCAGTGTGTAGTGTACATA 951
consensus_13001#1      GCATATGCATGCTAGCATGATTAAT-TAATTAATCATCATATCAGTGTGTAGTGTACATA 467
consensus_13001#4      AATAAT-CAAGTA-GTGCAGTGGATGTATCCAATGGCGAACTCAGAACAAAAGTTACCGA 388
consensus_13001#5      TTCTATATATATATATATATGTGATGTATCCAATGGCGAACCCAGAACAAAAGTTACCGG 68
                           **  *              ** **   ***    *   * *     *   ***   

consensus_13001#2      TA-TATAGTTTATAGTAGTACATATATTAATTCTTGCATGCGTGCTTGCATCTAGTAGTA 537
consensus_13001#3      TA-TATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTA 430
consensus_13001#0      TA-TATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTA 1010
consensus_13001#1      TA-TATAGTTTATAGTAGTACATATATTAATTCTTGCATGCATGCTTGCATCTAGTAGTA 526
consensus_13001#4      TGGTCCAATACATACTAAT-TATCTAATTATTGACTAATATATTAATTAATATAATGTAA 447
consensus_13001#5      TGGTCCAATACATACTAAT-TATCTAATTATTGGCTAATATATTAATTAATATAATGTAA 127
                       *  *  * *  *** ** *  ** ** * ***     **   *   *  ** ** *   *

consensus_13001#2      AATATATATG-GCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTT 596
consensus_13001#3      AATATATATG-GCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTT 489
consensus_13001#0      AATATATATG-GCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTT 1069
consensus_13001#1      AATATATATG-GCTATAGCTAGTTAGCTCATCGATCAGCTGGCTCTCTCATGCATATGTT 585
consensus_13001#4      TTTATATAGGAGGTAGTATAACCTAGGCATCCCGTTTGCAAGCATGCATATATATACAAG 507
consensus_13001#5      TTTGTATAGGAGGTAGTATAACCTAGGCATCCCGTTTGCAAGCATGCATATATATACAAG 187
                         * **** * * **     *  ***     *  *  **  **   *  **  ***    

consensus_13001#2      CACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGA 656
consensus_13001#3      CACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGA 549
consensus_13001#0      CACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGA 1129
consensus_13001#1      CACCCCCTCTGCTTTAATTAGTTAGCTTCATTTTTTCACAAGTTAATTAATGTGTGAGGA 645
consensus_13001#4      ACAGACAGACATATTACACATGGAGTAGTAGTAGTTGAAGAAGAATATGCATGATAATTA 567
consensus_13001#5      ACAGACAGACATATTACACATGGAGTAGTAGTAGTTGAAGAAGAATATGCATGATAATTA 247
                            *       ***   *   **    * *  ** *  *   *  *      * *  *

consensus_13001#2      GGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTA 716
consensus_13001#3      GGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTA 609
consensus_13001#0      GGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTA 1189
consensus_13001#1      GGATGGACTGAGCACTGCCGGCCGCATCTAGGATCGATCCAGAAATCAAACAAAATTTTA 705
consensus_13001#4      ATATAGAG-AAGCTCGATCGGTCAAGTGCAGGACGAAGCT--GAAGCAGACGGAGGTGGA 624
consensus_13001#5      ATATAGAG-AAGCTCGATCGGTCAAGTGCAGGACGAAGCT--GAAGCAGACGGAGGTGGA 304
                         ** **   *** *   *** *   *  ****   * *    ** ** **  *  *  *

consensus_13001#2      ATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATT 776
consensus_13001#3      ATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATT 669
consensus_13001#0      ATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATT 1249
consensus_13001#1      ATTCAAGTTGTTGGTTTTGCTTGCATCTAGCTATAGATGGTCACTTACTGGTGATGAATT 765
consensus_13001#4      TTGCGAGCTTCTGAAGCG--CTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCAT 682
consensus_13001#5      TTGCGAGCTTCTGAAGCG--CTGCTGCGAGACGCTGACGGAGGAGAACCGACGCCTCCAT 362
                        * * ** *  **        ***  * **     ** **      ** *  *      *

consensus_13001#2      TTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAG 836
consensus_13001#3      TTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAG 729
consensus_13001#0      TTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAG 1309
consensus_13001#1      TTATTGTCAGGGGAGTTAAGAGTGTTGTAGTTAGATGACGACGACATGACACCTAGCTAG 825
consensus_13001#4      CGTGAGCTCCAGCAGCTCAGGGCTCTG-ACCCACTCCACCGCCGC-CGGCTTCTTCATGG 740
consensus_13001#5      CGTGAGCTCCAGCAGCTCAGGGCTCTG-ACCCACTCCACCGCCGC-CGGCTTCTTCATGG 420
                            *     * ** * ** *   ** *   *    **  *  *  * *  **   * *

consensus_13001#2      CTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGA 896
consensus_13001#3      CTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGA 789
consensus_13001#0      CTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGA 1369
consensus_13001#1      CTAGCTAGCTCACACACATATATATACTGTACTCTGTACGTGATCCATGTATTATATTGA 885
consensus_13001#4      CCACCACCCTCCCCGTCCCCGCCGCCACG------------------------------- 769
consensus_13001#5      CCACCACCCTCCCCGTCCCCGCCGCCACGCTCTCCATCTGCCCCTCCTGCGAGCGCCTCG 480
                       * * *   *** *   *           *                               

consensus_13001#2      TTTGTTTCAGAAATATTATATATCAATGTATAT--------------------------- 929
consensus_13001#3      TTTGTTTCAGAAATATTATATATCAATGTATAT--------------------------- 822
consensus_13001#0      TTTGTTTCAGAAATATTATATATCAATGTATATTGATTTGTTTAAAAAAAAAAAAGA--- 1426
consensus_13001#1      TTTGTTTCAGAAATATTATATATCAATGTATATTGATTTGTTTAATTCTTCAGAGATTAA 945
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      CCACCGCCGCCGGCGGCGGAGCTTCCCCCACCGCGCGGCGACCGCACCAACAAGCCCACC 540
                                                                                   

consensus_13001#2      ------------------------------------------------------------
consensus_13001#3      ------------------------------------------------------------
consensus_13001#0      ------------------------------------------------------------
consensus_13001#1      AAAACAAAAAAAAAGGAA------------------------------------------ 963
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      GTCCCGCACTTGTTCAGCCCTTTCGCCAAGTCCGCCGCCTGCTAGCTAAATTAATCTCTA 600
                                                                                   

consensus_13001#2      ------------------------------------------------------------
consensus_13001#3      ------------------------------------------------------------
consensus_13001#0      ------------------------------------------------------------
consensus_13001#1      ------------------------------------------------------------
consensus_13001#4      ------------------------------------------------------------
consensus_13001#5      TCATCATCCTCTCCCTGCATATGCATGCTAGCATGATTAATTAATTAATCATCATATCAG 660
                                                                                   

consensus_13001#2      -
consensus_13001#3      -
consensus_13001#0      -
consensus_13001#1      -
consensus_13001#4      -
consensus_13001#5      T 661