These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13025#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2421 fasta sequence [CCGGCAGAGGAGAGGGCTCAAAGCCCCGTGCACGCGCCGCCTCTCCCTCCGCTGCGCTCCTCGCCTCCTCTCGGCTCTCGCTCTGCGCCACAGGCCCACAGCGCCGGCCGTCGCCCATCGGCGGCGTCGGGTCCCTCTCCCTCCTGCAGTCCTGCTCGAGCTCGACGACGACGACGAGTCTATGCCTCAAGCCCTAAACAGCTCCTCATAGGACCACCCAACGAATCGATCCTAGAGCCGCCACTGCATCGTCTCCTCGTCCGCCGCCGCCGCCATGTGGGCGCTCCGCCGCGCGGGCAACCCCCTCAGGGTCCGTGCCCACCAAGCTTTGAGTGCCCGTGGTTGTGCAAACCTTGAAGTAATTCTAAATGCAGATGCAAAGAATGTGGAAGAGCATCATGAGGGGGACTGTCAGAAATTGGATTGCTGTCATCAACCAAAGCCATTGGTCTGCCAACCATCATTCTCATCAGGCCGTTTCATGTGGAGTAGGGGTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAGCAGGATGAGTTGGAGGAAGGGTTTTCTGATCTGGAGGTTCCACCAGAAGCTCATAAAAAGGATTTAGATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTGTCTGAAGTGGAGGCTGATGCAAAACCTGAGGAGCCGATAAAGAAGTCACAATCCACTCTTCTTAAGGCTTTGCTGGAATCTCCAAGGGTTGATGTCGCTGGAGCATTGAAAAAATGGCTTAATGATGGCAATACATTGGATAGAAGTGAGCTCTTTTATGTCCTTCTTATTCTTCGGAGGCGGAAGCTCTACATCAAAGCCTTGCAGCTTCTGGAGTATGTTGAAGAATCCAAACTAATTGATCTTGGAGAACGTGATTATGCTTCACGCGTGGATTTGGTAGCTAAAACCCACAGTATTTACAAAGCTGAAAAGTACATTGAGAATGTTCCTGCATCTCATAGGGGTGAGATTGTATACAGGACTCTTTTGGCTAACTGTGTGGCTATAGCCAATGTGAAAAAAGCAGAACAAGTCTTCAATAAGATGAAGGACCTTGGATTTCCAGTTAGCGTATTTTCTTGCAATCAGCTTCTGCTACTCTACAAGAGAGTGGACAAGAAGAAGCTTGGTGATGTTCTCACAATGATGGAAAAGGAGAATGTGAAGCCTTCCCTCTTCACTTATAAGCTCCTTGTAGATACCAAGGGTGCTGCTAGAGATATTGAAGATATGGAAAAGGTCATTCAGGCAATGCAAGCGGATGGAATTGAACCAGATCTTCTGTTTCAAGCCACAATTGCAAGGCACTACATATTTGGTGGTTATCGTGAGAAATCTGAGGCAATTTTGGAGCAAATGGTGGGGGATGATATCAATGAAAACCGTTCTGCTTGCAAATTTGTTTTACCCCTGTATGCTTTTCTTGGCAAAAATGATGATGTTGAAAGGATCTGGAAGGTTTGTGAGGCCAATGCTCGTCTAGATGAGTGCATGTCTGCAATAGAGGCTTTTGGTAAGCTTGGGGATGTTGAAAAGGCTGAGGAGATATTTGACAATATGTTCAAGACATGGAAGACACTTTCGTCCAAATACTACAATGCTATGCTGAAGGTGTATGCCAACAAAAAGCTTTTTGACAAGGGGAAGGAGCTAGCAAAGCGGA-TGGGTGATGATGGTTGCAGACTAGGGCCCTATACATTGGATTCACTTGTGAAGCTCTATTCGGATGCAGGAGAGGTGGAGAAAGCTGATTCCATATTGCATAAGCTATCATATAAGAACAAGATTAAGCCTATGTACACCACATACTTGATGCTGCTTGATAGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAGAAATTGTTCAGCAAGGTGCGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGC-TTC-TTGAGGCATATCT-GAATGCAAAGA-CCCCACCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCT-TTGCTTGCTGC-TACCGA-TCCATTCAACAGGAAGAACGCAATGTCTGAATT-GCTCGATTAGGTTCTTCTGTTAGCTTCATTTTGTGCCCATCTAATACATGTGCTGGTTGTCCTTCTGCCAAAATATATATGACATGACGATGAGATAATAAATTAGCCTT-AGCGATGTAATGAACTAGTAGTGTTTGCTTACCTTTTGCGGCTATTGCCTTACCGAGCAGGCGAGTAGGATTGGAATCTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACGTGTCACTATCTCTTGACTTGTTAATTAGCAAACAAATGTCAGTTTTGCTAGTCCTTAAGCTAATGATATATTAAGGTTTCTTTAAAAAA] [+] EMBL AK120125 [CCGGCAGAGGAGAGGGCTCAAAGCCCCGTGCACGCGCCGCCTCTCCCTCCGCTGCGCTCCTCGCCTCCTCTCGGCTCTCGCTCTGCGCCACAGGCCCACAGCGCCGGCCGTCGCCCATCGGCGGCGTCGGGTCCCTCTCCCTCCTGCAGTCCTGCTCGAGCTCGACGACGACGACGAGTCTATGCCTCAAGCCCTAAACAGCTCCTCATAGGACCACCCAACGAATCGATCCTAGAGCCGCCACTGCATCGTCTCCTCGTCCGCCGCCGCCGCCATGTGGGCGCTCCGCCGCGCGGGCAACCCCCTCAGGGTCCGTGCCCACCAAGCTTTGAGTGCCCGTGGTTGTGCAAACCTTGAAGTAATTCTAAATGCAGATGCAAAGAATGTGGAAGAGCATCATGAGGGGGACTGTCAGAAATTGGATTGCTGTCATCAACCAAAGCCATTGGTCTGCCAACCATCATTCTCATCAGGCCGTTTCATGTGGAGTAGGGGTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAGCAGGATGAGTTGGAGGAAGGGTTTTCTGATCTGGAGGTTCCACCAGAAGCTCATAAAAAGGATTTAGATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTGTCTGAAGTGGAGGCTGATGCAAAACCTGAGGAGCCGATAAAGAAGTCACAATCCACTCTTCTTAAGGCTTTGCTGGAATCTCCAAGGGTTGATGTCGCTGGAGCATTGAAAAAATGGCTTAATGATGGCAATACATTGGATAGAAGTGAGCTCTTTTATGTCCTTCTTATTCTTCGGAGGCGGAAGCTCTACATCAAAGCCTTGCAGCTTCTGGAGTATGTTGAAGAATCCAAACTAATTGATCTTGGAGAACGTGATTATGCTTCACGCGTGGATTTGGTAGCTAAAACCCACAGTATTTACAAAGCTGAAAAGTACATTGAGAATGTTCCTGCATCTCATAGGGGTGAGATTGTATACAGGACTCTTTTGGCTAACTGTGTGGCTATAGCCAATGTGAAAAAAGCAGAACAAGTCTTCAATAAGATGAAGGACCTTGGATTTCCAGTTAGCGTATTTTCTTGCAATCAGCTTCTGCTACTCTACAAGAGAGTGGACAAGAAGAAGCTTGGTGATGTTCTCACAATGATGGAAAAGGAGAATGTGAAGCCTTCCCTCTTCACTTATAAGCTCCTTGTAGATACCAAGGGTGCTGCTAGAGATATTGAAGATATGGAAAAGGTCATTCAGGCAATGCAAGCGGATGGAATTGAACCAGATCTTCTGTTTCAAGCCACAATTGCAAGGCACTACATATTTGGTGGTTATCGTGAGAAATCTGAGGCAATTTTGGAGCAAATGGTGGGGGATGATATCAATGAAAACCGTTCTGCTTGCAAATTTGTTTTACCCCTGTATGCTTTTCTTGGCAAAAATGATGATGTTGAAAGGATCTGGAAGGTTTGTGAGGCCAATGCTCGTCTAGATGAGTGCATGTCTGCAATAGAGGCTTTTGGTAAGCTTGGGGATGTTGAAAAGGCTGAGGAGATATTTGACAATATGTTCAAGACATGGAAGACACTTTCGTCCAAATACTACAATGCTATGCTGAAGGTGTATGCCAACAAAAAGCTTTTTGACAAGGGGAAGGAGCTAGCAAAGCGGA TGGGTGATGATGGTTGCAGACTAGGGCCCTATACATTGGATTCACTTGTGAAGCTCTATTCGGATGCAGGAGAGGTGGAGAAAGCTGATTCCATATTGCATAAGCTATCATATAAGAACAAGATTAAGCCTATGTACACCACATACTTGATGCTGCTTGATAGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAGAAATTGTTCAGCAAGGTGCGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGC TTC TTGAGGCATATCT GAATGCAAAGA CCCCACCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCT TTGCTTGCTGC TACCGA TCCATTCAACAGGAAGAACGCAATGTCTGAATT GCTCGATTAGGTTCTTCTGTTAGCTTCATTTTGTGCCCATCTAATACATGTGCTGGTTGTCCTTCTGCCAAAATATATATGACATGACGATGAGATAATAAATTAGCCTT AGCGATGTAATGAACTAGTAGTGTTTGCTTACCTTTTGCGGCTATTGCCTTACCGAGCAGGCGAGTAGGATTGGAATCTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACGTGTCACTATCTCTTGACTTGTTAATTAGCAAACAAATGTCAGTTTTGCTAGTCCTTAAGCTAATGATATATTAAGGTT ] [+] EMBL CB634093 [ GGGCTCAAAGCCCCGTGCACGCGCCGCCTCTCCCTCCGCTGCGCTCCTCGCCTCCTCTCGGCTCTCGCTCTGCGCCACAGGCCCACAGCGCCGGCCGTCGCCCATCGGCGGCGTCGGGTCCCTCTCCCTCCTGCAGTCCTGCTCGAGCTCGACGACGACGACGAGTCTATGCCTCAAGCCCTCAACAGCTCCTCATAGGACCACCCAACGAATCGATCCTACAGCCGCCACTGCATCGTCTCCTCGTCCGCCGCCGCCGCCATGTGGGCGCTCCGCCGCGCGGGCAACCCCCTCAGGGTCCGTGCCCACCAAGCTTTGAGTGCCCGTGGTTGTGCAAACCTTGAAGTAATTCTAAATGCAGATGCAAAGAATGTGGAAGAGCATCATGAGGGGGACTGTCAGAAATTGGATTGCTGTCATCAACCAAAGCCATTGGTCTGCCAACCATCATTCTCATCAGGCCGTTTCATGTGGAGTAGGGGTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAGCAGGATGAGTTGGAGGAAGGGTTTTCTGATCTGGACGTTCCACCAGAAGCTCATAAAAAGGATTTAGATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTGTCTGAAGTGGAGGCTGATGCAAAACCTGAGGAGCCGATAAAGAAGTCACAATCCACTCTTCTTAAGGCTTTGCTGGAATCTCCAAGGGTTGATGTCGCTGGAGCATTGAAAAAATGGCTTAATGATGGCAATACATTGGATAGAAGTGAG ] [+] EMBL CB679573 [ GTCCGTGCCCACCAAGCTTTGAGTGCCCGTGGTTGTGCAAACCTTGAAGTAATTCTAAATGCAGATGCAAAGAATGTGGAAGAGCATCATGAGGGGGACTGTCAGAAATTGGATTGCTGTCATCAACCAAAGCCATTGGTCTGCCAACCATCATTCTCATCAGGCCGTTTCATGTGGAGTAGGGGTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAGCAGGATGAGTTGGAGGAAGGGTTTTCTGATCTGGAGGTTCCACCAGAAGCTCATAAAAAGGATTTAGATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTGTCTGAAGTGGAGGCTGATGCAAAACCTGAGGAGCCGATAAAGAAGTCACAATCCACTCTTCTTAAGGCTTTGCTGGAATCTCCAAGGGTTGATGTCGCTGGAGCATTGAAAAAATGGCTTAATGATGGCAATACATTGGATAGAAGTGAGCTCTTTTATGTCCTTCTTATTCTTCGGAGGCGGAAGCTCTACATCAAAGCCTTGCAGCTTCTGGAGTATGTTGAAGAATCCAAACTAATTGATCTTGGAGAACGTGATTATGCTTCACGCGTGGATTTGGTAGCTAAAACCCACAGTATTTACAAAGCTGAAAAGTACATTGAGAATGTTCCTGCATCTCATAGGGGTGAGATTGTATACAGGACTCTTTTGGCTAACTGTGTGGCTATAGCCAATGTGAAAAAAGCAGAACAAGTCTTCAATAAGATGAAGGACCTTGGATTTCCAGTTAGCGTATTTTCTTGCAATCAGCTTCT ] [-] EMBL CB679574 [ TTTGGTAAGCTTGGGGATG TGAAAAGGCTGAGGAGATATTTGACAATATGTTCAAGACATGGAAGACACTTTCGTCCAAATACTACAATGCTATGCTGAAGGTGTATGCCAACAAAAAGCTTTTTGACAAGGGGAAGGAGCTAGCAAAGCGGA TGGGTGATGATGGTTGCAGACTAGGGCCCTATACATTGGATTCACTTGTGAAGCTCTATTCGGATGCAGGAGAGGTGGAGAAAGCTGATTCCATATTGCATAAGCTATCATATAAGAACAAGATTAAGCCTATGTACACCACATACTTGATGCTGCTTGATAGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAGAAATTGTTCAGCAAGGTGCGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGC TTC TTGAGGCATATCT GAATGCAAAGA CCCCACCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCT TTGCTTGCTGC TACCGA TCCATTCAACAGGAAGAACGCAATGTCTGAATT GCTCGATTAGGTTCTTCTGTTAGCTTCATTTTGTGCCCATCTAATACATGTGCTGGTTGTCCTTCTGCCAAAATATATATGACATGACGATGAGATAATAAATTAGCCTT AGCGATGTAATGAACTAGTAGTGTTTGCTTACCTTTTGCGGCTATTGCCTTACCGAGCAGGCGAGTAGGATTGGAATCTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACGTGTCACTATCTCTTGACTTGTTAATTAGCAAACAAATGTCAGTTTAGGTAGTCCTTAAGCTAATGATATATTAAGGTTTCT ] [-] EMBL CB634094 [ AGATATTTGACAATATGTTCAAGACATGGAAGACACTTTCGTCCAAATACTACAATGCTATGCTGAAGGTGTATGCCAACAAAAAGCTTTTTGACAAGGGGAAGGAGCTAGCAAAGCGGA TGGGTGATGATGGTTGCAGACTAGGGCCCTATACATTGGATTCACTTGTGAAGCTCTATTCGGATGCAGGAGAGGTGGAGAAAGCTGATTCCATATTGCATAAGCTATCATATAAGAACAAGATTAAGCCTATGTACACCACATACTTGATGCTGCTTGATAGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAGAAATTGTTCAGCAAGGTGCGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGC TTC TTGAGGCATATCT GAATGCAAAGA CCCCCCCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCT TTGCTTGCTGC TACCGA TCCATTCAACAGGAAGAACGCAATGTCTAAATT GCTCGATTAGGTTCTTCTGTTAGCTTCATTTTGTGCCCATCTAATACATGTGCTGGTTGTCCTTCTGCCAAAATATATATGACATGACGATGAGATAATAAATTAGCCTT AGCGATGTAATGAACTAGTAGTGTTTGCTTACCTTTTGCGGCTATTGCCTTACCGAGCAGGCGAGTAGGATTGGAATCTTATGAAAGGTAATCTTAGTTCTATTTTGTCTACTTCATga ] [+] EMBL C93513 [ GAAGGAGCTAGCAAAG GNANTGGGTGATGATGGTTGCAGACTAGGGCCCTATACATTGGATTCACTTGTGAAGCTCTATTCGGATGCAGGAGAGGTGGAGAAAGCTGATTCCATATTGCATAAGCTATCATATAAGAACAAGATTAAGCCTATGTACACCACATACTTGATGCTGCTTGATAGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAGAAATTGTTCAGCAAGGTNCGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGC TTC TTGAGGCATATCT GAATGCAAAGA CCCCACCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCT TTGCTTGCTGC TACCGA TCCATTCAACAGGAAGAACGCAATGTCTGAATT GCTCGATTAGGGTCTTCT ] [+] EMBL CA759925 [ GGCCCTATACATTGGATTCACTTGTGAAGCTCTATTGGGATGCAGGAGAGGTGGAGAAAGCTGATTCCATATTGCATAAGCTCTCATATAAGAACAAGATTAAGCCTATGTACACCACATACTTGATGCTGCTTGATAGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAGAAATTGTTCAGCAAGGTGCGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGC TTC TTGAGGCATATCT GAATGCAAAGA CCCCACCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCT TTGCTTGCTGC TACCGA TCCATTCAACAGGAAGAACGCAATGTCTAAATT GCTCGATTAGGTTCTTCTGTTAGCTTCATTTTGTGCCCATCTAATACATGTGCTGGTTGTCCTTCTGCCAAAATATATATGACATGACGATGAGATAATAAATTAGCCTT AGCGATGTAATGAACTAGTAGTGTTTGCTTACCTTTTGCGGCTATTGCCTTACCGAGCAGGCGAGTAGGATTGGAATCTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACGTGTCACTATCTCTTGACTTGTTAATTAGCAAACAAATGTCAGTTTTGCTAaaaaaaaa ] [+] EMBL BI811716 [ tCGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGCTTTCTTTGAGGCATATCTGGAATGC AAGA CCCCACCTTATGGATTCAAGGAGAGGATGAA GCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCTGTTGCTTGCTGCGTTCCGAGTCCATTC ACAGGAAGAACGCAATGTCTAAATTGGCTCGATTAGGTTCTTCTGTTAGCTTCA TTTGTGCCCATCTAATACATGTGCTGGTTGTCCTTCTGCC AAATATATATGACATGACGATGAGATAATAAATTAGCCTTGAGCGATGTAATGAACTAGTAGTGTTTGCTTACCTTTTGCGGCTATTGCCTTACCGAGCAGGCGAGTAGGATTGGAATCTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACGTGTCACTATCTCTTGACTTGTTAATTAGCAAACAAATGTCAGTTTTGCTAaaaaaaaaa ] [-] EMBL CF331189 [ AATGCAAAGACCCCCACCTTA GGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCT TTGCTTGCTGC TACCGA TCCATTCAACAGGAAGAACGCAATGTCTGAATT GCTCGATTAGGTTCTTCTGTTAGCTTCATTTTGTGCCCATCTAATACATGTGCTGGTTGTCCTTCTGCCAAAATATATATGACATGACGATGAGATAATAAATTAGCCTT AGCGATGTAATGAACTAGTAGTGTTTGCTTACCTTTTGCGGCTATTGCCTTACCGAGCAGGCGAGTAGGATTGGAATCTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACGTGTCACTATCTCTTGACTTGTTAATTAGCAAACAAATGTCAGTTTTGCTAGTCCTTAAGCTAATGATATATTAAGGTTTCTTTAAAAAA] [+] EMBL CF331190 [ AATGCAAAGA CCCCACCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCT TTGCTTGCTGC TACCGA TCCATTCAACAGGAAGAACGCAATGTCTGAATT GCTCGATTAGGTTCTTCTGTTAGCTTCATTTTGTGCCCATCTAATACATGTGCTGGTTGTCCTTCTGCCAAAATATATATGACATGACGATGAGATAATAAATTAGCCTT AGCGATGTAATGAACTAGTAGTGTTTGCTTACCTTTTGCGGCTATTGCCTTACCGAGCAGGCGAGTAGGATTGGAATCTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACGTGTCACTATCTCTTGACTTGTTAATTAGCAAACAAATGTCAGTTTTGCTAGTCCTTAAGCTAATGATATATTAAGGTTTCTTTAAAAA ] consensusID : consensus_13025#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 521 fasta sequence [CCTGGGGTTTTAGCCGCCTCCCCCTCCCCCTGGGGTTTTAGCCGCCTCTGCCCCTCTCTCTCTCTCTCTTCCCCTCTCCATCGCGGAATCCCTCCATCGCCACGACCCCGCCGTCTCCTCCGCCGCCGCCATGTGGGCGCTCCGCCGCGCGGGCAACCCCCTCAGGGTCCGTGCCTACCAAGCTTTGAGTGCCCGTGGTTGTGCAAACCTTGAAGTAATTCTAAATGCAGATGCAAAGAATGTAGAAGAGCATCATGAGCGGGACTGTCAGAAATTGGATTGCTGTCATCAACCAAAACCATTGGTCTGCCAATCATCATTCTCATCAGGCCGTTTCATGTGGAGTAGGGTTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAGCAGGATGAGTTGGAGGAAGGGTTTTCTGATCTGGAGGTTCCACCAGAAGCTGATAAAAAGGATTTAGATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTGTCTCAAGTGGAGG] [+] EMBL CB639692 [CCTGGGGTTTTAGCCGCCTCCCCCTCCCCCTGGGGTTTTAGCCGCCTCTGCCCCTCTCTCTCTCTCTCTTCCCCTCTCCATCGCGGAATCCCTCCATCGCCACGACCCCGCCGTCTCCTCCGCCGCCGCCATGTGGGCGCTCCGCCGCGCGGGCAACCCCCTCAGGGTCCGTGCCTACCAAGCTTTGAGTGCCCGTGGTTGTGCAAACCTTGAAGTAATTCTAAATGCAGATGCAAAGAATGTAGAAGAGCATCATGAGCGGGACTGTCAGAAATTGGATTGCTGTCATCAACCAAAACCATTGGTCTGCCAATCATCATTCTCATCAGGCCGTTTCATGTGGAGTAGGGTTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAGCAGGATGAGTTGGAGGAAGGGTTTTCTGATCTGGAGGTTCCACCAGAAGCTGATAAAAAGGATTTAGATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTGTCTCAAGTGGAGG] consensusID : consensus_13025#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 107 fasta sequence [CTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGTCTTGCCG] [+] EMBL CF313541 [CTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGTCTTGCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13025#0 CCGGCAGAGGAGAGGGCTCAAAGCCCCGTGCACGCGCCGCCTCTCCCTCCGCTGCGCTCC 60 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 TCGCCTCCTCTCGGCTCTCGCTCTGCGCCACAGGCCCACAGCGCCGGCCGTCGCCCATCG 120 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GCGGCGTCGGGTCCCTCTCCCTCCTGCAGTCCTGCTCGAGCTCGACGACGACGACGAGTC 180 consensus_13025#1 ----------------------CCTGGGGTTTTAGCCGCCTCCCCCTCCCCCTGGGGTTT 38 consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 TA--TGCCTCAAGCCCTAAACAGCTCCTCATAGGACCACCCAACGAATCGATCCTAGAGC 238 consensus_13025#1 TAGCCGCCTCTGCCCCTCTCTCTCTCTCTCTTCCCCTCTCCATCGCGG-AATCCCTCCAT 97 consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 CGCCACTGCATCGTCTCCTCGTCCGCCGCCGCCGCCATGTGGGCGCTCCGCCGCGCGGGC 298 consensus_13025#1 CGCCACGACCCCGCCGTCTCCTCCGCCGCCGC---CATGTGGGCGCTCCGCCGCGCGGGC 154 consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 AACCCCCTCAGGGTCCGTGCCCACCAAGCTTTGAGTGCCCGTGGTTGTGCAAACCTTGAA 358 consensus_13025#1 AACCCCCTCAGGGTCCGTGCCTACCAAGCTTTGAGTGCCCGTGGTTGTGCAAACCTTGAA 214 consensus_13025#2 -------------CTTATGAATGTTAATCTT--AGTTCT----ATTTTGTCTACTTCATT 41 ** ** *** *** * ** ** ** * consensus_13025#0 GTAATTCTAAATGCAGATGCAAAGAATGTGGAAGAGCATCATGAGGGGGACTGTCAGAAA 418 consensus_13025#1 GTAATTCTAAATGCAGATGCAAAGAATGTAGAAGAGCATCATGAGCGGGACTGTCAGAAA 274 consensus_13025#2 GACGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----AAACC 96 * * *** * * *** ** ** * * * * * * * consensus_13025#0 TTGGATTGCTGTCATCAACCAAAGCCATTGGTCTGCCAACCATCATTCTCATCAGGCCGT 478 consensus_13025#1 TTGGATTGCTGTCATCAACCAAAACCATTGGTCTGCCAATCATCATTCTCATCAGGCCGT 334 consensus_13025#2 CTGTCTTGCCG------------------------------------------------- 107 ** **** * consensus_13025#0 TTCATGTGGAGTAGGGGTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAGCAGGAT 538 consensus_13025#1 TTCATGTGGAGTAGGGTTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAGCAGGAT 394 consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GAGTTGGAGGAAGGGTTTTCTGATCTGGAGGTTCCACCAGAAGCTCATAAAAAGGATTTA 598 consensus_13025#1 GAGTTGGAGGAAGGGTTTTCTGATCTGGAGGTTCCACCAGAAGCTGATAAAAAGGATTTA 454 consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTGTCTGAA 658 consensus_13025#1 GATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTGTCTCAA 514 consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GTGGAGGCTGATGCAAAACCTGAGGAGCCGATAAAGAAGTCACAATCCACTCTTCTTAAG 718 consensus_13025#1 GTGGAGG----------------------------------------------------- 521 consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GCTTTGCTGGAATCTCCAAGGGTTGATGTCGCTGGAGCATTGAAAAAATGGCTTAATGAT 778 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GGCAATACATTGGATAGAAGTGAGCTCTTTTATGTCCTTCTTATTCTTCGGAGGCGGAAG 838 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 CTCTACATCAAAGCCTTGCAGCTTCTGGAGTATGTTGAAGAATCCAAACTAATTGATCTT 898 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GGAGAACGTGATTATGCTTCACGCGTGGATTTGGTAGCTAAAACCCACAGTATTTACAAA 958 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GCTGAAAAGTACATTGAGAATGTTCCTGCATCTCATAGGGGTGAGATTGTATACAGGACT 1018 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 CTTTTGGCTAACTGTGTGGCTATAGCCAATGTGAAAAAAGCAGAACAAGTCTTCAATAAG 1078 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 ATGAAGGACCTTGGATTTCCAGTTAGCGTATTTTCTTGCAATCAGCTTCTGCTACTCTAC 1138 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 AAGAGAGTGGACAAGAAGAAGCTTGGTGATGTTCTCACAATGATGGAAAAGGAGAATGTG 1198 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 AAGCCTTCCCTCTTCACTTATAAGCTCCTTGTAGATACCAAGGGTGCTGCTAGAGATATT 1258 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GAAGATATGGAAAAGGTCATTCAGGCAATGCAAGCGGATGGAATTGAACCAGATCTTCTG 1318 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 TTTCAAGCCACAATTGCAAGGCACTACATATTTGGTGGTTATCGTGAGAAATCTGAGGCA 1378 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 ATTTTGGAGCAAATGGTGGGGGATGATATCAATGAAAACCGTTCTGCTTGCAAATTTGTT 1438 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 TTACCCCTGTATGCTTTTCTTGGCAAAAATGATGATGTTGAAAGGATCTGGAAGGTTTGT 1498 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GAGGCCAATGCTCGTCTAGATGAGTGCATGTCTGCAATAGAGGCTTTTGGTAAGCTTGGG 1558 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GATGTTGAAAAGGCTGAGGAGATATTTGACAATATGTTCAAGACATGGAAGACACTTTCG 1618 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 TCCAAATACTACAATGCTATGCTGAAGGTGTATGCCAACAAAAAGCTTTTTGACAAGGGG 1678 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 AAGGAGCTAGCAAAGCGGATGGGTGATGATGGTTGCAGACTAGGGCCCTATACATTGGAT 1738 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 TCACTTGTGAAGCTCTATTCGGATGCAGGAGAGGTGGAGAAAGCTGATTCCATATTGCAT 1798 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 AAGCTATCATATAAGAACAAGATTAAGCCTATGTACACCACATACTTGATGCTGCTTGAT 1858 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 AGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAGAAATTGTTCAGCAAGGTGCGGCAG 1918 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 ATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGCTTCTTGAGGCATATCTGAATGCA 1978 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 AAGACCCCACCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCCAATAGG 2038 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GCTGTGGCGTCTTTGCTTGCTGCTACCGATCCATTCAACAGGAAGAACGCAATGTCTGAA 2098 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 TTGCTCGATTAGGTTCTTCTGTTAGCTTCATTTTGTGCCCATCTAATACATGTGCTGGTT 2158 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GTCCTTCTGCCAAAATATATATGACATGACGATGAGATAATAAATTAGCCTTAGCGATGT 2218 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 AATGAACTAGTAGTGTTTGCTTACCTTTTGCGGCTATTGCCTTACCGAGCAGGCGAGTAG 2278 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 GATTGGAATCTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACGTGTCAC 2338 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 TATCTCTTGACTTGTTAATTAGCAAACAAATGTCAGTTTTGCTAGTCCTTAAGCTAATGA 2398 consensus_13025#1 ------------------------------------------------------------ consensus_13025#2 ------------------------------------------------------------ consensus_13025#0 TATATTAAGGTTTCTTTAAAAAA 2421 consensus_13025#1 ----------------------- consensus_13025#2 ----------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||