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Oryza sativa
cluster # 13027 cluster # 13027       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13027#0 length = 898 sequences # 7  
consensus_13027#1 length = 628 sequences # 1  
consensus_13027#2 length = 549 sequences # 4  

consensusID : consensus_13027#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 898
fasta sequence
                              [AAAAACACTCGAAGAGCTCGGCGGTGGAACAGCTCGCTCGATCATGGCCGCCGCCGCCGCCGCCTCAAGGGCGCTCTGGGCTTGCCGCACCGCCTCCTACCTTCGGATCTCCTCCTTCCCCAGGGCTTTCTCCACCGTCCTTAAAGATCTAAAATATGCTGATACTCATGAGTGGGTGAAGGTTGAGGGTGATTCAGCAACCATAGGGGTCACAGACCATGCTCAGGACCATTTGGGTGATGTTGTGTATGTTGAGCTTCCAGAAGTTGGTTCCACAGTATCACAAGGAACGAACTTTGGTGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCCCTAACTGCTGGATTTCAAGAAACTATGCAGCAACTCACCATCATGACAATGAGCCATCTCGCCTCTCCTACCACATTATATTATTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACATTTTTCTTGCAAATCAGACATGAAAATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCATTTGAAATTCAGCTCTTGATTTGCTTATCATCTGAATACAGGTGGAGGATTGGGTTTGTTTAAACTTTGATTAAGTGACAGTGACTTGATTGTATTGAGATTGCAGCTCAGGGATTGTGGGTTTGTTTATCTTCTGAATTCAATTCTGGAGATAGCTGCATGAAACGTGATCCACCCG]

[+] EMBL AK058606             [AAAAACACTCGAAGAGCTCGGCGGTGGAACAGCTCGCTCGATCATGGCCGCCGCCGCCGCCGCCTCAAGGGCGCTCTGGGCTTGCCGCACCGCCTCCTACCTTCGGATCTCCTCCTTCCCCAGGGCTTTCTCCACCGTCCTTAAAGATCTAAAATATGCTGATACTCATGAGTGGGTGAAGGTTGAGGGTGATTCAGCAACCATAGGGGTCACAGACCATGCTCAGGACCATTTGGGTGATGTTGTGTATGTTGAGCTTCCAGAAGTTGGTTCCACAGTATCACAAGGAACGAACTTTGGTGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCCCTAACTGCTGGATTTCAAGAAACTATGCAGCAACTCACCATCATGACAATGAGCCATCTCGCCTCTCCTACCACATTATATTATTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACATTTTTCTTGCAAATCAGACATGAAAATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCATTTGAAATTCAGCTCT                                                                                                                                                                  ]
[+] EMBL AK071621             [            AGAGCTCGGCGGTGGAACAGCTCGCTCGATCATGGCCGCCGCCGCCGCCGCCTCAAGGGCGCTCTGGGCTTGCCGCACCGCCTCCTACCTTCGGATCTCCTCCTTCCCCAGGGCTTTCTCCACCGTCCTTAAAGATCTAAAATATGCTGATACTCATGAGTGGGTGAAGGTTGAGGGTGATTCAGCAACCATAGGGGTCACAGACCATGCTCAGGACCATTTGGGTGATGTTGTGTATGTTGAGCTTCCAGAAGTTGGTTCCACAGTATCACAAGGAACGAACTTTGGTGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCCCTAACTGCTGGATTTCAAGAAACTATGCAGCAACTCACCATCATGACAATGAGCCATCTCGCCTCTCCTACCACATTATATTATTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACATTTTTCTTGCAAATCAGACATGAAAATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCATTTGAAATTCAGCTCTTGATTTGCTTATCATCTGAATACAGGTGGAGGATTGGGTTTGTTTAAACTTTGATTAAGTGACAGTGACTTGATTGTA                                                                                    ]
[+] EMBL CA767156             [                    GCGGTGGAACAGCTCGCTCGATCATG   GCCGCCGCCGCCGCCTCAAGGGCGCTCTGGGCTTGCCGCACCGCCTCCTACCTTCGGATCTCCTCCTTCCCCAGGGCTTTCTCCACCGTCCTTAAAGATCTAAAATATGCTGATACTCATGAGTGGGTGAAGGTTGAGGGTGATTCAGCAACCATAGGGGTCACAGACCATGCTCAGGACCATTTGGGTGATGTTGTGTATGTTGAGCTTCCAGAAGTTGGTTCCACAGTATCACAAGGAACGAACTTTGGTGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCCCTAACTGCTGGATTTCAAGAAACTATGCAGCAACTCACCATCATGACAATGAGCCATCTCGCCTCTCCTACCACATTATATTATTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACATTTTT TTGCGAATCAGACATGAAAATTTTGTAGTGTCCTGATCATTCCGGTTGTGCTCCATTTGAAANTCAGCTCTTGATTTGCT                                                                                                                                                         ]
[+] EMBL OS0556A              [                        TGGAACAGCTCGCTCGATCATGGCCGCCGCCGCCGCCGCCTCAAGGGCGCTCTGGGCTTGCCGCACCGCCTCCTACCTTCGGATCTCCTCCTTCCCCAGGGCTTTCTCCACCGTCCTTAAAGATCTAAAATATGCTGATACTCATGAGTGGGTGAAGGTTGAGGGTGATTCAGCAACCATAGGGGTCACAGACCATGCTCAGGACCATTTGGGTGATGTTGTGTATGTTGAGCTTCCAGAAGTTGGTTCCACAGTATCACAAGGAACGAACTTTGGTGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTTAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGNTGATGGATGATGAG AGGACAAGANGTTTTGTGNGG AGGAGNTGGNAANCATTGATC ATCCnt                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU069967             [                                         TCATGGCCGCCGCCGCCGCCGCCTCAAGGGCGCTCTGGGCTTGCCGCACCGCCTCCTACCTTCGGATCTCCTCCTTCCCCAGGGCTTTCTCCACCGTCCTTAAAGATCTAAAATATGCTGATACTCATGAGTGGGTGAAGGTTGAGGGTGATTCAGCAACCATAGGGGTCACAGACCATGCTCAGGACCATTTGGGTGATGTTGTGTATGTTGAGCTTCCAGAAGTTGGTTCCACAGTATCACAAGGAACGAACTTTGGTGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCC                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA999987             [                                                                                                                                                                                                                                     CATTTGGGTGATGTTGTGTATGTTGAGCTTCCCCTTGAAGGATCCACAGTATCACAAGGAACGAACTTTGGTGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGATAAGGGATGGATCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK060567             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAATCAGACATGAAAATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCATTTGAAATTCAGCTCTTGATTTGCTTATCATCTGAATACAGGTGGAGGATTGGGTTTGTTTAAACTTTGATTAAGTGACAGTGACTTGATTGTATTGAGATTGCAGCTCAGGGATTGTGGGTTTGTTTATCTTCTGAATTCAATTCTGGAGATAGCTGCATGAAACGTGATCCACCCG]


>consensus_13027#0 AAAAACACTCGAAGAGCTCGGCGGTGGAACAGCTCGCTCGATCATGGCCGCCGCCGCCGC CGCCTCAAGGGCGCTCTGGGCTTGCCGCACCGCCTCCTACCTTCGGATCTCCTCCTTCCC CAGGGCTTTCTCCACCGTCCTTAAAGATCTAAAATATGCTGATACTCATGAGTGGGTGAA GGTTGAGGGTGATTCAGCAACCATAGGGGTCACAGACCATGCTCAGGACCATTTGGGTGA TGTTGTGTATGTTGAGCTTCCAGAAGTTGGTTCCACAGTATCACAAGGAACGAACTTTGG TGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTAT TCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAA GGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGA TGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCCCTAACT GCTGGATTTCAAGAAACTATGCAGCAACTCACCATCATGACAATGAGCCATCTCGCCTCT CCTACCACATTATATTATTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACAT TTTTCTTGCAAATCAGACATGAAAATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCA TTTGAAATTCAGCTCTTGATTTGCTTATCATCTGAATACAGGTGGAGGATTGGGTTTGTT TAAACTTTGATTAAGTGACAGTGACTTGATTGTATTGAGATTGCAGCTCAGGGATTGTGG GTTTGTTTATCTTCTGAATTCAATTCTGGAGATAGCTGCATGAAACGTGATCCACCCG



consensusID : consensus_13027#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 628
fasta sequence
                              [GCGGTGGTTNTCCTCCCTCCANNCCCCCCCCCCCCCTTTTTTTTTTTGGGGAGGAAAATTTTTTTTTCCCCGGCAAAAAAAAAGGGGGAACAATAAGAAGGGGAAAAAAACCCCCCCCGGTTTTTTTTTTAAAAAAGAAGGAGCCCCCCTCTTTTTTAAAAGAGGGGGGGGGGTTTCTTCCCCCGGGGTGTTTTTAAAAAATAAAAAGGGGGCCCCCCCCAAGGGGGGGGGTTTTAAACCCCCCCCCTTTATGGGGGGTTTTTTTGGAAAAACCCCCAAAAAAGTTTTTTTGTAGGGAAAAAAAAAATGGGCAAAACCCTTGGTCCCAATTCCCCCTAAAAGGGTGGGGGTTTCCCCAAAAAAATTTATGGCAAGCAACTTACCCTTCATGGCAATTGAAGCCATTCTTCGCCTTTCTTCCTTACCCCACCATNTTATAATTNNATTTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACATTTTTCTTGCAAATCAGACATGAAGATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCATTTGAAATTCAGCTCTTGATTTGCTTATCATCTGAATACAGGTGGAGGATTGGGTTTGTTTAAAAAAAAAAAAAAAAAA]

[-] EMBL CA761764             [GCGGTGGTTNTCCTCCCTCCANNCCCCCCCCCCCCCTTTTTTTTTTTGGGGAGGAAAATTTTTTTTTCCCCGGCAAAAAAAAAGGGGGAACAATAAGAAGGGGAAAAAAACCCCCCCCGGTTTTTTTTTTAAAAAAGAAGGAGCCCCCCTCTTTTTTAAAAGAGGGGGGGGGGTTTCTTCCCCCGGGGTGTTTTTAAAAAATAAAAAGGGGGCCCCCCCCAAGGGGGGGGGTTTTAAACCCCCCCCCTTTATGGGGGGTTTTTTTGGAAAAACCCCCAAAAAAGTTTTTTTGTAGGGAAAAAAAAAATGGGCAAAACCCTTGGTCCCAATTCCCCCTAAAAGGGTGGGGGTTTCCCCAAAAAAATTTATGGCAAGCAACTTACCCTTCATGGCAATTGAAGCCATTCTTCGCCTTTCTTCCTTACCCCACCATNTTATAATTNNATTTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACATTTTTCTTGCAAATCAGACATGAAGATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCATTTGAAATTCAGCTCTTGATTTGCTTATCATCTGAATACAGGTGGAGGATTGGGTTTGTTTAAAAAAAAAAAAAAAAAA]


>consensus_13027#1 GCGGTGGTTNTCCTCCCTCCANNCCCCCCCCCCCCCTTTTTTTTTTTGGGGAGGAAAATT TTTTTTTCCCCGGCAAAAAAAAAGGGGGAACAATAAGAAGGGGAAAAAAACCCCCCCCGG TTTTTTTTTTAAAAAAGAAGGAGCCCCCCTCTTTTTTAAAAGAGGGGGGGGGGTTTCTTC CCCCGGGGTGTTTTTAAAAAATAAAAAGGGGGCCCCCCCCAAGGGGGGGGGTTTTAAACC CCCCCCCTTTATGGGGGGTTTTTTTGGAAAAACCCCCAAAAAAGTTTTTTTGTAGGGAAA AAAAAAATGGGCAAAACCCTTGGTCCCAATTCCCCCTAAAAGGGTGGGGGTTTCCCCAAA AAAATTTATGGCAAGCAACTTACCCTTCATGGCAATTGAAGCCATTCTTCGCCTTTCTTC CTTACCCCACCATNTTATAATTNNATTTCTGGATAGAGGAGTCCCAAGGAATGTAATAAG CTGAAACATTTTTCTTGCAAATCAGACATGAAGATTTTGTAGTGTCCTGATCATTCCGTT TGTGCTCCATTTGAAATTCAGCTCTTGATTTGCTTATCATCTGAATACAGGTGGAGGATT GGGTTTGTTTAAAAAAAAAAAAAAAAAA



consensusID : consensus_13027#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 549
fasta sequence
                              [ACCCATCGGGNTCACAGACCATGCTCAGGACCCATTTGGGT-GA-TG-TTGTGTATG-TTGAGCTTCCAGAAGTTGGTTCCACAGT-ATCA-CAAGGANCGAACTTTGGT-GCGGTTGAAAGTNTGAAAGCAACCA-GTGATATCAATGCA-CCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCCCTAACTGCTGGATTTCAAGAAACTATGCAGCAACTCACCATCATGACAATGAGCCATCTCGCCTCTCCTACCACATTATATTATTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACATTTTTCTTGC-AAATCAGACATGAAAATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCATTTGAAATTCAAAAAAAAAAAAAAAA]

[+] EMBL C98072               [ACCCATCGGGNTCACAGACCATGCTCAGGACCCATTTGGGT GA TG TTGTGTATG TTGAGCTTCCAGAAGTTGGTTCCACAGT ATCA CAAGGANCGAACTTTGGT GCGGTTGAAAGTNTGAAAGCAACCA GTGATATCAATGCA CCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCCCTAACTGCTGGATTTCAAGAAACTATGCAGCAACTCACCATCATGACAATGAGCCATCTCGCCTCTCCTACCACATTATATTATTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACATTTTTCTTGC AAATCAGACATGAAAATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCATTTGAAATTCAAAAAAAAAAAAAAAA]
[+] EMBL BI798727             [                                    TGGTTAGATTGTTTGTGTATGTTTGAGCTTCCAGAATTTGGTCCCCCAGTGATCACCAAGGAACGAACTTTGGTCCCGGTTGAAAGTGTGAAAGCAACCACGTGATATCAATGCACCCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCCCTAACTGCTGGATTTCAAGAAACTATGCAGCAACTCACCATCATGACCATGAGCCATCTCGCCTCTCCTACCACATTATATTATTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACATTTTTCTTGCAAAATCAGACATGAAAATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCCTTTGAAATTCAAAAAAAAAA      ]
[+] EMBL C99625               [                                                                                                                                     CCA GTGATATCAATGCA CCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCCCTAACTGCTGGATTTCAAGAAACTATGCAGCANCTCACCATCATGACANTGAGCCATCTCGCCTCTNCTACCACATNATATTATTCTGGATAGAGGAGTCCCAAGGNATGTAATAAGCTGgna                                                                                          ]
[+] EMBL AU064326             [                                                                                                                                     CCA GTGATATCAATGCA CCAGTATCTGGAGAGATTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGANGTCCATATGAGAAGGGATGGATCATCAAGGTTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGNTGATGAGAAGTACAAGAAGTTTTGTGAGGNNGAAGATGGCAAACACTGATCAATCCCCTAACTGCTGGNTTTCAAGAAACTATGCAGCAACTCACCATCATGACANTGAGCCATCTCGCCTNTCCTACCACATTATATTATTC                                                                                                                               ]


>consensus_13027#2 ACCCATCGGGNTCACAGACCATGCTCAGGACCCATTTGGGTGATGTTGTGTATGTTGAGC TTCCAGAAGTTGGTTCCACAGTATCACAAGGANCGAACTTTGGTGCGGTTGAAAGTNTGA AAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGATTATTCAAGTAAATGATGAAC TAAGTGAAAAACCAGGATTTATAAATGGAAGTCCATATGAGAAGGGATGGATCATCAAGG TTAAGATAAGTGATCCAAGTGAGTTAAACTCGCTGATGGATGATGAGAAGTACAAGAAGT TTTGTGAGGAAGAAGATGGCAAACACTGATCAATCCCCTAACTGCTGGATTTCAAGAAAC TATGCAGCAACTCACCATCATGACAATGAGCCATCTCGCCTCTCCTACCACATTATATTA TTCTGGATAGAGGAGTCCCAAGGAATGTAATAAGCTGAAACATTTTTCTTGCAAATCAGA CATGAAAATTTTGTAGTGTCCTGATCATTCCGTTTGTGCTCCATTTGAAATTCAAAAAAA AAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13027#0      AAAAACACTCGAAGAGCTCGGCGGTGGAACAGCTCGCTCGATCATGGCCGCCGCCGCCGC 60
consensus_13027#2      ------------------------------------------------------------
consensus_13027#1      ------------------------------------------------------------
                                                                                   

consensus_13027#0      CGCCTCAAGGGCGCTCTGGGCTTGCCGCACCGCCTCCTACCTTCGGATCTCCTCCTTCCC 120
consensus_13027#2      ------------------------------------------------------------
consensus_13027#1      ------------------------------------------------------------
                                                                                   

consensus_13027#0      CAGGGCTTTCTCCACCGTCCTTAAAGATCTAAAATATGCTGATACTCATGAGTGGGTGAA 180
consensus_13027#2      ------------------------------------------------------------
consensus_13027#1      ------------------------------------------------------------
                                                                                   

consensus_13027#0      GGTTGAGGGTGATTCAGCAACCATAGGGGTCACAGACCATGCTCAGGACC-ATTTGGGTG 239
consensus_13027#2      ------------------ACCCATCGGGNTCACAGACCATGCTCAGGACCCATTTGGGTG 42
consensus_13027#1      -----GCGGTGGTTNTCCTCCCTCCANNCCCCC---CCCCCCCCTTTTTTTTTTTGGGGA 52
                                           **        * *   **   * *        ******  

consensus_13027#0      ATGTTGTGTATGTTGAGCTTCCAGAAGTT--GGTTCCACAGTATCACAAGGAACGAACTT 297
consensus_13027#2      ATGTTGTGTATGTTGAGCTTCCAGAAGTT--GGTTCCACAGTATCACAAGGANCGAACTT 100
consensus_13027#1      GGAAAATTTTTTTTTCCCCGGCAAAAAAAAAGGGGGAACAATAAGAAGGGGAAAAAAACC 112
                             * * * **   *   ** **     **    *** **  *   ***   **   

consensus_13027#0      TGGTGCGGTTGAAAGTGTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGA- 356
consensus_13027#2      TGGTGCGGTTGAAAGTNTGAAAGCAACCAGTGATATCAATGCACCAGTATCTGGAGAGA- 159
consensus_13027#1      CCCCCCGGTTTTTTTTTTAAAAAAGAAGGAGCCCCCCTCTTTTTTAAAAGAGGGGGGGGG 172
                            *****     * * ***   *          *  *     *  *   ** * *  

consensus_13027#0      -----TTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCC 411
consensus_13027#2      -----TTATTCAAGTAAATGATGAACTAAGTGAAAAACCAGGATTTATAAATGGAAGTCC 214
consensus_13027#1      GTTTCTTCCCCCGGGGTGTTTTTAAA-AAATAAAAAGGGGGCCCCCCCCAAGGGGGGGGG 231
                            **   *  *    *  * **  ** * ****    *        ** **  *   

consensus_13027#0      ATATGAGAAGGGATGGATCATCAAGG----TTAAGATAAGTGATCCAAGTGAGTTAAACT 467
consensus_13027#2      ATATGAGAAGGGATGGATCATCAAGG----TTAAGATAAGTGATCCAAGTGAGTTAAACT 270
consensus_13027#1      TTTTAAACCCCCCCCCTTTATGGGGGGTTTTTTTGGAAAAACCCCCAAAAAAGTTT--TT 289
                        * * *           * **   **    **  *  **     ****   ****    *

consensus_13027#0      CGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGAT 527
consensus_13027#2      CGCTGATGGATGATGAGAAGTACAAGAAGTTTTGTGAGGAAGAAGATGGCAAACACTGAT 330
consensus_13027#1      TTGTAGGGAAAAAAAAAATGGGCAAAACCCTTGGTCCCAATTCCCCCTAAAAGGGTGGGG 349
                          *   * *  *  * * *  *** *   ** **    *          **     *  

consensus_13027#0      CAATCCCCTAACTGCTGGATTTCAAGAAACTATGCAGCAACTCACCATCATGACAATGAG 587
consensus_13027#2      CAATCCCCTAACTGCTGGATTTCAAGAAACTATGCAGCAACTCACCATCATGACAATGAG 390
consensus_13027#1      GTTTCCCCAAAAAAATTTATGGCAAGCAACT-TACCCTTCATGGCAATTGAAGCCATTCT 408
                          ***** **    *  **  **** **** * *      *  * **     * **   

consensus_13027#0      CCATCTCGCCTCT----CCTACCACATTATA-TTAT---TCTGGATAGAGGAGTCCCAAG 639
consensus_13027#2      CCATCTCGCCTCT----CCTACCACATTATA-TTAT---TCTGGATAGAGGAGTCCCAAG 442
consensus_13027#1      TCGCCTTTCTTCCTTACCCCACCATNTTATAATTNNATTTCTGGATAGAGGAGTCCCAAG 468
                        *  **  * **     ** ****  ***** **     *********************

consensus_13027#0      GAATGTAATAAGCTGAAACATTTTTCTTGCAAATCAGACATGAAAATTTTGTAGTGTCCT 699
consensus_13027#2      GAATGTAATAAGCTGAAACATTTTTCTTGCAAATCAGACATGAAAATTTTGTAGTGTCCT 502
consensus_13027#1      GAATGTAATAAGCTGAAACATTTTTCTTGCAAATCAGACATGAAGATTTTGTAGTGTCCT 528
                       ******************************************** ***************

consensus_13027#0      GATCATTCCGTTTGTGCTCCATTTGAAATTCAGCTCTTGATTTGCTTATCATCTGAATAC 759
consensus_13027#2      GATCATTCCGTTTGTGCTCCATTTGAAATTCAAAAAAAAAAAAAAAA------------- 549
consensus_13027#1      GATCATTCCGTTTGTGCTCCATTTGAAATTCAGCTCTTGATTTGCTTATCATCTGAATAC 588
                       ********************************       *                    

consensus_13027#0      AGGTGGAGGATTGGGTTTGTTTAAACTTTGATTAAGTGACAGTGACTTGATTGTATTGAG 819
consensus_13027#2      ------------------------------------------------------------
consensus_13027#1      AGGTGGAGGATTGGGTTTGTTTAAAAAAAAAAAAAAAAAA-------------------- 628
                                                                                   

consensus_13027#0      ATTGCAGCTCAGGGATTGTGGGTTTGTTTATCTTCTGAATTCAATTCTGGAGATAGCTGC 879
consensus_13027#2      ------------------------------------------------------------
consensus_13027#1      ------------------------------------------------------------
                                                                                   

consensus_13027#0      ATGAAACGTGATCCACCCG 898
consensus_13027#2      -------------------
consensus_13027#1      -------------------
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)