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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13029#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2428 fasta sequence
[CAAGCACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCATCCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCTCGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCCCTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATCTCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATGCACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTATGTCCCAGTGCAACTTTTAAGCTGTTGGCTCTTCATGCCTTACTTTATGCTTGCATAGCATATCTCATGCCCTTCTTGGACGATATCATGTGTAGCATGCTACGCTACATTCAAAATTTTATTTTGTTGGCTCATAATAAGGACAAGATCACACATGCTATGAACGGTCCTCTCATTTACTTTATGACACAACTGATCATTTCTATCCATTTTATTAGAAGTGCCATGCTTAGACATTGCAACCACTGCACAGGCATGTAAAAAATGTATCCTGATGACATTAGTTTATTTGTTTTGCATAATCTTGTCCAGCATAAGACTTCCAATGGTATACTTTTACTCACATATTCATTTACTTTCCAGTAGTAAATAGTAAGCCACACATCTGCATCTGGTGTTACCTTTGCTGTTGCCATTTCATAAAATATTGTCAATCCATTCCAAATATTATCCATCGGAGTATGAAATAGGGTCTTCGTCTATTGGATATTACTAATGAAGTTTTTGACACATGAAAATATTTTTTTAGTGAATTGGTTGTTTATAGTTATAGGATTGATTAGGTCTCACATGTCCATTTTAGTAAAACGTTTTCTCCCAAATGATGGATTGATTCTGTTCAAATTTCATCAGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCTTTTGATCTACACAAATGCCATGGTGGTTGTTACCTCTAACCATATTATATTACCATTGCATTTATATCTTAAGATTTAAATTGCATTTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATTTACGTTTGGTATACCATGACAATAATATAGCAGTTTAGGTTTTTAGTTAATTGTATTGGTTGAGAATGAGTTGGAGTTGTTTTGTTGGATTTCTATCGTTACAATTGTTGCTTTCAATTGTGTACGAGAAAATATTTCAAACTTAACTTGACAGGCCATATATATTCTGCAGTATATTTTACACA-CCCATTGGCTTGGAAACTAAGTCTAACTAGCATATTTTATTTGATTCAACCACTCTTTTGTTGATTAAATAATGGTTAGTTTGTCCCAGATTATTTGAATTTCTACATATATAATTGATCGCCTTTTTTCATGACTTTCTTTTAGTAGAGTTTATGGTTTGATGCATGTGGTTTACTATCTGCTACGTATGTTAACTTAAAAAGGAATCTGAGCTTGTAATAGTTGTGTGCTACTATTGTCATTTTAACATGGGTCTATATTGTAACTGGGATCTACCTGAAGTTGAGTTGGTGGTTCTACTATTTTGTAATCACGATGAAGTTGACTTGGTTCTGCCATTATGTAATCTCAAGCGATATGCTGATTTTTTTTTCTTAAAAAA]
[+] EMBL AK067287 [CAAGCACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCATCCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCTCGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCCCTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATCTCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATGCACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTATGTCCCAGTGCAACTTTTAAGCTGTTGGCTCTTCATGCCTTACTTTATGCTTGCATAGCATATCTCATGCCCTTCTTGGACGATATCATGTGTAGCATGCTACGCTACATTCAAAATTTTATTTTGTTGGCTCATAATAAGGACAAGATCACACATGCTATGAACGGTCCTCTCATTTACTTTATGACACAACTGATCATTTCTATCCATTTTATTAGAAGTGCCATGCTTAGACATTGCAACCACTGCACAGGCATGTAAAAAATGTATCCTGATGACATTAGTTTATTTGTTTTGCATAATCTTGTCCAGCATAAGACTTCCAATGGTATACTTTTACTCACATATTCATTTACTTTCCAGTAGTAAATAGTAAGCCACACATCTGCATCTGGTGTTACCTTTGCTGTTGCCATTTCATAAAATATTGTCAATCCATTCCAAATATTATCCATCGGAGTATGAAATAGGGTCTTCGTCTATTGGATATTACTAATGAAGTTTTTGACACATGAAAATATTTTTTTAGTGAATTGGTTGTTTATAGTTATAGGATTGATTAGGTCTCACATGTCCATTTTAGTAAAACGTTTTCTCCCAAATGATGGATTGATTCTGTTCAAATTTCATCAGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCTTTTGATCTACACAAATGCCATGGTGGTTGTTACCTCTAACCATATTATATTACCATTGCATTTATATCTTAAGATTTAAATTGCATTTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATTTACGTTTGGTATACCATGACAATAATATAGCAGTTTAGGTTTTTAGTTAATTGTATTGGTTGAGAATGAGTTGGAGTTGTTTTGTTGGATTTCTATCGTTACAATTGTTGCTTTCAATTGTGTACGAGAAAATATTTCAAACTTAACTTGACAGGCCATATATATTCTGCAGTATATTTTACACA CCCATTGGCTTGGAAACTAAGTCTAACTAGCATATTTTATTTGATTCAACCACTCTTTTGTTGATTAAATAATGGTTAGTTTGTCCCAGATTATTTGAATTTCTACATATATAATTGATCGCCTTTTTTCATGACTTTCTTTTAGTAGAGTTTATGGTTTGATGCATGTGGTTTACTATCTGCTACGTATGTTAACTTAAAAAGGAATCTGAGCTTGTAATAGTTGTGTGCTACTATTGTCATTTTAACATGGGTCTATATTGTAACTGGGATCTACCTGAAGTTGAGTTGGTGGTTCTACTATTTTGTAATCACGATGAAGTTGACTTGGTTCTGCCATTATGTAATCTCAAGCGATATGCT ]
[+] EMBL CB662094 [ ATCCCCCCCTATCCGCCATGGTCGATCCCCATCCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCTCGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCCCTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATCTCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATGCACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACC ATGCCTGCACATTCTGGAAGACCATCGCCAAACCG ]
[+] EMBL CF304533 [ GGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATCTCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATGCACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTG ]
[+] EMBL CF305127 [ GGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATCTCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATGCACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGATA ]
[+] EMBL CF304319 [ TTATTTTGTTGGCTCATAATAAGGACAAGATCACACATGCTATGAACGGTCCTCTCATTTACTTTATGACACAACTGATCATTTCTATCCATTTTATTAGAAGTGCCATGCTTAGACATTGCAACCACTGCACAGGCATGTAAAAAATGTATCCTGATGACATTAGTTTATTTGTTTTGCATAATCTTGTCCAGCATAAGACTTCCAATGGTATACTTTTACTCACATATTCATTTACTTTCCAGTAGTAAATAGTAAGCCACACATCTGCATCTGGTGTTACCTTTGCTGTTGCCATTTCATAAAATATTGTCAATCCATTCCAAATATTATCCATCGGAGTATGAAATAGGGTCTTCGTCTATTGGATATTACTAATGAAGTTTTTGACACATGAAAATATTTTTTTAGTGAATTGGTTGTTTATAGTTATAGGATTGATTAGGTCTCACATGTCCATTTTAGTAAAACGTTTTCTCCCAAATGATGGATTGATTCTGTTCAAATTTCATCAGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCT ]
[+] EMBL BM420203 [ TTATTT TTTTGCATAATCTTGTCCAGCATAAGACTTCCAATGGTATACTTTTACTCACATATTCATTTACTTTCCAATAGTAAATAGTAAGCCACACATCTGCATCTGGTGTTACCTTTGCTGTTGCCATTTCATAAAATATTGTCAATCCATTCCCAATATTATCCATCGGAGTATGAAATAGGGTCTTCGTCTATTGGATATTACTAATGAAGTTTTTGACACATGAAAATATTTTTTTAGTGAATTGGTTGTTTATAGTTATAGGATTGATTAGGTCTCACATGTCCATTTTAGTAAAACGTTTTCTCCC AATGATGGATTGATTCTGTTCAAATTTCATCAGGTGCTTATATTGGC ATATTTCCATTTGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCTTTTGATCTAAAAAAAa ]
[-] EMBL CF312808 [ TTTAAAATTTTTCTAATTTACGTTTGGTATACCATGACAATAATATAGCAGTTTAGGTTTTTAGTTAATTGTATTGGTTGAGAATGAGTTGGAGTTGTTTTGTTGGATTTCTATCGTTACAATTGTTGCTTTCAATTGTGTACGAGAAAATATTTCAAACTTAACTTGACAGGCCATATATATTCTGCAGTATATTTTACACACCCCATTGGCTTGGAAACTAAGTCTAACTAGCATATTTTATTTGATTCAACCACTCTTTTGTTGATTAAATAATGGTTAGTTTGTCCCAGATTATTTGAATTTCTACATATATAATTGATCGCCTTTTTTCATGACTTTCTTTTAGTAGAGTTTATGGTTTGATGCATGTGGTTTACTATCTGCTACGTATGTTAACTTAAAAAGGAATCTGAGCTTGTAATAGTTGTGTGCTACTATTGTCATTTTAACATGGGTCTATATTGTAACTGGGATCTACCTGAAGTTGAGTTGGTGGTTCTACTATTTTGTAATCACGATGAAGTTGACTTGGTTCTGCCATTATGTAATCTCAAGCGGTATGCTGATTTTTTTTTCTTAAAAAA]
consensusID : consensus_13029#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 780 fasta sequence
[CTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTTTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATTTTTGTTAGCTTGGTTCCAAGTGCCCCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAA-GGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTC-AAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTG-TGGGGGATGTTACTGATACA-CGAGCTTTTGATCTACACAAATGCC-TGGTGGGTTGTTACCTCTAAC-CATATTATATTACCATTGCATTTATAT-C-TTAAGATTTAAATTGCATTTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATTTACGTTTGGTAT]
[-] EMBL CB662095 [CTTGATCTGTGCATTCCTTCCATTAACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCACGTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTTTGATGATAAGCTGATAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATTTTTGTTAGCTTGGTTCCAAGTGCCCCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAA GGCGATCAATGCCCCAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATTTTCAGTTC AAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTG TGGGGAATTTTACTAATACA CAACCTTTTAAT ]
[+] EMBL CF312807 [ TTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAA GGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTC AAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGGATGTTACTGATACA CGAGCTTTTGATCTACACAAATGCC TGGTGGGTTGTTACCTCTAAC CATATTATATTACCATTGCATTTATAT C TTAAGATTTAAATTGCATTTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATTTACGTTTGGTAT]
[+] EMBL AU101145 [ ccgGTTTGTCTTCAANGGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCNAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTG TTGGGGATGTTACTGATACAGCGAGCTTTTGATCTACACAAATGCCATGGT GGTTGTTACCTCTAACGCATATTATATTAGCATTGCATTTATATNCNTTAAGATTTAA ]
consensusID : consensus_13029#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 743 fasta sequence
[ACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCATCCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCTCGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCCCTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACC--TCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCT]
[+] EMBL AK120138 [ACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCATCCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCTCGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCCCTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACC TCTTACAGGTTTTGGGGTCTACCTTCCATGAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACCAATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTGAGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGCTACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAATTGGTGCTTATATTGGCAATATTTCCATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCT]
[+] EMBL CF304606 [ GATCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACCTTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTTCTTACAGGTTTTGGGGTCTACCTTACATGAATATAATGGCTACTATTGAAACCAAAAATAACTCCGTGATTGGTGCACTGATTTA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13029#0 CAAGCACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCAT 60
consensus_13029#2 -----ACGCCACTACATCGCCAAGATCGATCCCCTCCCATCCGCCATGGTCGATCCCCAT 55
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 CCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCT 120
consensus_13029#2 CCTCCCTCACAGAAATCGTCGTGCCATGTTCGATCCTCGTCTCTCGTCGCAGAAATCGCT 115
consensus_13029#1 ------------------------------------------CTTGATCTGTGCATTCCT 18
** * ** **
consensus_13029#0 CGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCC 180
consensus_13029#2 CGCACAGCCGCATCTTCCGCCGCCACGGCTTCTTTCGTCGCCTTTCTTAGCAGCGGCGCC 175
consensus_13029#1 TCCATTAACCTTTATTAGATTCCTTTTGATTCTC------CTTTACTGAAGAATTACAGC 72
** * * ** * * **** * ** ** * * * *
consensus_13029#0 CTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGA 240
consensus_13029#2 CTTGGCTCCCTTTCTTCTCCATGAGCACTGTGTGCAGGTCTGAGGTGGCGTCCAAGAAGA 235
consensus_13029#1 GGAAGGTGCCACG-TTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAAT 131
* * ** *** ***** * * * * * * ***
consensus_13029#0 TCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACC 300
consensus_13029#2 TCGGCAGCAGCGCCCTTGCTTTCCCCTCCTTTGGCAACGATCTGCATGCTCCGGTTTACC 295
consensus_13029#1 TGTGAATCCCTGTTTTGACTTTCAAGATTTTTTTCACC--TCATCACTCGAGCATTACTT 189
* * * * * * ***** *** ** * ** ** * **
consensus_13029#0 TTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACCGTGTAAGATTCGATATC 360
consensus_13029#2 TTGCTTTTATTCAGTTCAAGGTTAACACTGCCTCCATTTTACC----------------- 338
consensus_13029#1 TTGATGATAAGCTGAT-AACCTTCTGACAATCTTTATAGTTTTG---------------- 232
*** * ** * * * ** ** ** ** ** *
consensus_13029#0 TCCATGCATGAGTGGGTCCTGGTGTAGTCATGATCTATTAAGTATGGACTTTGAGCCATG 420
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 CACTCGATTAGCCGGATTTGATGTATCATGTATGGACTTGATCTGTGCATTCCTTCCATT 480
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 AACCTTTATTAGATTCCTTTTGATTCTCCTTTACTGAAGAATTACAGCGGAAGGTGCCAC 540
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 GTTCCAATTGAGCTTTCTCGTAATACATAATATTTTTAGTGGGAAATTGTGAATCCCTGT 600
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TTTGACTTTCAAGATTTTTTTCACCTCATCACTCGAGCATTACTTCTGATGATAAGCTGA 660
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TAACCTTCTGACAATCTTTATAGTTTTGAAGTCTTACAGGTTTTGGGGTCTACCTTCCAT 720
consensus_13029#2 -------------------------------TCTTACAGGTTTTGGGGTCTACCTTCCAT 367
consensus_13029#1 ----------------------------AAGTCTTACAGGTTTTGGGGTCTACCTTCCAT 264
*****************************
consensus_13029#0 GAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACC 780
consensus_13029#2 GAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACC 427
consensus_13029#1 GAATATAATGGCTACTATTGAAACCAGAAATAACTCCGTGATTGGTGTACTGCTTTAACC 324
************************************************************
consensus_13029#0 AATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTG 840
consensus_13029#2 AATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTG 487
consensus_13029#1 AATGCCTGCACATTCTGGAAGACCATCGCCAAACCGATATCGATATCGTACGCACAACTG 384
************************************************************
consensus_13029#0 AGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGC 900
consensus_13029#2 AGTCATCTCTGCTAGCTTGGTTCCAAGTGCACCTCTACTAGCTAGCGATGATGAGTTCGC 547
consensus_13029#1 AGTCATTTTTGTTAGCTTGGTTCCAAGTGCCCCTCTACTAGCTAGCGATGATGAGTTCGC 444
****** * ** ****************** *****************************
consensus_13029#0 TACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAAT 960
consensus_13029#2 TACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAAT 607
consensus_13029#1 TACATATTTCCGTTTGTCTTCAAGGCGATCAATGCCACAGTGTCTATATACCAGTCCAAT 504
************************************************************
consensus_13029#0 TGGTATGTCCCAGTGCAACTTTTAAGCTGTTGGCTCTTCATGCCTTACTTTATGCTTGCA 1020
consensus_13029#2 TGGTGCTTATATTGGCAATATTT---CCATTCG------GTGCATTGATCTTCAGTT--- 655
consensus_13029#1 TGGTGCTTATATTGGCAATATTT---CCATTCG------GTGCATTGATCTTCAGTT--- 552
**** * **** *** * ** * *** ** * * **
consensus_13029#0 TAGCATATCTCATGCCCTTCTTGGACGATATCATGTGTAGCATGCTACGCTACATTCAAA 1080
consensus_13029#2 CAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGT----TGTCATTGTCAAA 711
consensus_13029#1 CAAGATAAATAATGGTCTGCGTATGTTCTATTTTTCTTACCGT----TGTCATTGTCAAA 608
* *** * *** ** * * *** * ** * * * * *****
consensus_13029#0 ATTTTATTTTGTTGGCTCATAATAAGGACAAGATCACACATGCTATGAACGGTCCTCTCA 1140
consensus_13029#2 TGTTTGTTGGGGATGTTACTGATA--CACGAGCT-------------------------- 743
consensus_13029#1 TGTTTGTGGGGGATGTTACTGATA--CACGAGCTTTTGATCTACACAAATGCCTGGTGGG 666
*** * * * * * *** ** ** *
consensus_13029#0 TTTACTTTATGACACAACTGATCATTTCTATCCATTTTATTAGAAGTGCCATGCTTAGAC 1200
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 TTGTTACCTCTAACCATATTATATTACCATTGCATTTATATCTTAAGATTTAAATTGCAT 726
consensus_13029#0 ATTGCAACCACTGCACAGGCATGTAAAAAATGTATCCTGATGACATTAGTTTATTTGTTT 1260
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 TTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATTTACGTTTGGTAT------ 780
consensus_13029#0 TGCATAATCTTGTCCAGCATAAGACTTCCAATGGTATACTTTTACTCACATATTCATTTA 1320
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 CTTTCCAGTAGTAAATAGTAAGCCACACATCTGCATCTGGTGTTACCTTTGCTGTTGCCA 1380
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TTTCATAAAATATTGTCAATCCATTCCAAATATTATCCATCGGAGTATGAAATAGGGTCT 1440
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TCGTCTATTGGATATTACTAATGAAGTTTTTGACACATGAAAATATTTTTTTAGTGAATT 1500
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 GGTTGTTTATAGTTATAGGATTGATTAGGTCTCACATGTCCATTTTAGTAAAACGTTTTC 1560
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TCCCAAATGATGGATTGATTCTGTTCAAATTTCATCAGGTGCTTATATTGGCAATATTTC 1620
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 CATTCGGTGCATTGATCTTCAGTTCAAGATAAATAATGGTCTGCGTATGTTCTATTTTTC 1680
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TTACCGTTGTCATTGTCAAATGTTTGTTGGGGATGTTACTGATACACGAGCTTTTGATCT 1740
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 ACACAAATGCCATGGTGGTTGTTACCTCTAACCATATTATATTACCATTGCATTTATATC 1800
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TTAAGATTTAAATTGCATTTCGACATAAAGGGATTATGATATTTTAAAATTTTTCTAATT 1860
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TACGTTTGGTATACCATGACAATAATATAGCAGTTTAGGTTTTTAGTTAATTGTATTGGT 1920
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TGAGAATGAGTTGGAGTTGTTTTGTTGGATTTCTATCGTTACAATTGTTGCTTTCAATTG 1980
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TGTACGAGAAAATATTTCAAACTTAACTTGACAGGCCATATATATTCTGCAGTATATTTT 2040
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 ACACACCCATTGGCTTGGAAACTAAGTCTAACTAGCATATTTTATTTGATTCAACCACTC 2100
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TTTTGTTGATTAAATAATGGTTAGTTTGTCCCAGATTATTTGAATTTCTACATATATAAT 2160
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TGATCGCCTTTTTTCATGACTTTCTTTTAGTAGAGTTTATGGTTTGATGCATGTGGTTTA 2220
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 CTATCTGCTACGTATGTTAACTTAAAAAGGAATCTGAGCTTGTAATAGTTGTGTGCTACT 2280
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 ATTGTCATTTTAACATGGGTCTATATTGTAACTGGGATCTACCTGAAGTTGAGTTGGTGG 2340
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 TTCTACTATTTTGTAATCACGATGAAGTTGACTTGGTTCTGCCATTATGTAATCTCAAGC 2400
consensus_13029#2 ------------------------------------------------------------
consensus_13029#1 ------------------------------------------------------------
consensus_13029#0 GATATGCTGATTTTTTTTTCTTAAAAAA 2428
consensus_13029#2 ----------------------------
consensus_13029#1 ----------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||