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Oryza sativa
cluster # 13059 cluster # 13059       Sequences # 12       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13059#0 length = 685 sequences # 6  
consensus_13059#1 length = 531 sequences # 2  
consensus_13059#2 length = 334 sequences # 1  
consensus_13059#3 length = 325 sequences # 1  
consensus_13059#4 length = 324 sequences # 1  
consensus_13059#5 length = 277 sequences # 1  

consensusID : consensus_13059#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 685
fasta sequence
                              [GTCAGCCACCACCCACCGCGACCGAGGAAGAAGAAGAAAAGAGATCAGGAGGAGGGGAAGAGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGGAGGACCCGGGGAAGCGGG-ACGCGGCGCAGCGGGAGCACGTGTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCGACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCGACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCCCCGATTCGATCCGGAATAGATGCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGTTTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATGCTTTCTGTTTGGTTAAAAGCTCAGATCCAGAAGGTCTTAGAGAGGCCGTTCTGTATTTCCGTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTTTAATAATCGCACTGAGGAATTGCTTGCGTCATTAAATTTGAAAACATTCAATTGNTGTGGTATCNAAGCTTGCTAGGGCATTTTCGGTGCNNNNNNNNNNN]

[+] EMBL OSC30271             [GTCAGCCACCACCCACCGCGACCGAGGAAGAAGAAGAAAAGAGATCAGGAGGAGGGGAAGAGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGGAGGACCCGGGGAAGCGGGAACGCGNAGCANGGGNAGCACGTNTACCGGATGAAGGAGCAGTGCGAGCGCANCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCGACCGATTCAACTCCCAGCTCTNCTGGGATC                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF305282             [       ACCACCCACCGCGACCGAGGAAGAAGAAGAGAGGAGATCAGGAGGAGGGGAAGAGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGGAGGACCCGGGGAAGCGGG ACGCGGCGCAGCGGGAGCACGTGTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCGACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCGACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCCCCGATTCGATCCGGAATAGATGCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGTTTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATGCTTTCTGTTTGGTTAAAA                                                                                                                                                                                           ]
[+] EMBL OSR27521A            [                                         AGATCAGGAGGAGGGGAAGAGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGGAGGACCCGGGGAAGNGGG ACGCGNCGCA NGGGAGCACGTNTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCGACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCGACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCCCCGATTCGATCCGGAATAGA                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU064192             [                                         AGATCAGGAGGAGGGGAAGAGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGGAGGACCCGGGGAAGCGGG ACGCGACGCANGGNGAGCACGTGTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCGACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGTCCCCGGCCGCCGCGACCCCTACGACGACGTCCTCCACCGNCACTC                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK062981             [                                           ATCAGGAGGAGGGGAAGAGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGGAGGACCCGGGGAAGCGGG ACGCGGCGCAGCGGGAGCACGTGTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCGACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCGACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCCCCGATTCGATCCGGAATAGATGCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGTTTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATGCTTTCTGTTTGGTTAAAAGCTCAGATCCAGAAGGTCTTAGAGAGGCCGTTCTGTATTTCCGTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTTTAATAATCGCACTGAGGAATTGC                                                                              ]
[+] EMBL CA756455             [                                                                           GTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGGAGGACCTGGGGAAGCGGG ACGCGGCGCAGCGGGAGCACGTGTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCGACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCGACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCCCCGATTCGATCCGGAATAGATGCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGTTTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATGCTTTCTGTTTGGTTAANAGCTCAGATCCAGAAGGTCTTAGAGAGGCCGTTCTGTATTTCCGTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTTTAATAATCGCACTGAGGAATTGCTTGCGTCATTAAATTTGAAAACATTCAATTGNTGTGGTATCNAAGCTTGCTAGGGCATTTTCGGTGCNNNNNNNNNNN]


>consensus_13059#0 GTCAGCCACCACCCACCGCGACCGAGGAAGAAGAAGAAAAGAGATCAGGAGGAGGGGAAG AGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGG AGGACCCGGGGAAGCGGGACGCGGCGCAGCGGGAGCACGTGTACCGGATGAAGGAGCGGT GCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCG ACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCG ACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCC CCGATTCGATCCGGAATAGATGCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGT TTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATG CTTTCTGTTTGGTTAAAAGCTCAGATCCAGAAGGTCTTAGAGAGGCCGTTCTGTATTTCC GTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTTTAATAATCGCACTGAG GAATTGCTTGCGTCATTAAATTTGAAAACATTCAATTGNTGTGGTATCNAAGCTTGCTAG GGCATTTTCGGTGCNNNNNNNNNNN



consensusID : consensus_13059#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 531
fasta sequence
                              [AGGACCCGGGGAAGCGGGACGCGGCGCAGTGGGAGCACGTGTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCGACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCGACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCCCCGATTCGATCCGGAATAGATGCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGTTTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATGCTTTCTGTTTGGTTAAAAGCTCAGATCCAGAAGGTCTTAGAGAGGCCGTTCTGTATTTCCGTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTTTAATAATCGCACTGAGGAATTGCTTGCGTCATTAAAATTTGAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BE039845             [AGGACCCGGGGAAGCGGGACGCGGCGCAGTGGGAGCACGTGTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCGACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCGACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCCCCGATTCGATCCGGAATAGATGCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGTTTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATGCTTTCTGTTTGGTTAAAAGCTCAGATCCAGAAGGTCTTAGAGAGGCCGTTCTGTATTTCCGTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTTTAATAATCGCACTGAGGAATTGCTTGCGTCATTAAAATTTGAAAAAAAAAAAAAAAA          ]
[+] EMBL AU091404             [                                                                                              CCG CCCTACGGCTTCTGGACCTTCGACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCGACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCNCNNCCTGATCCCCCGATTCGATCCGGAATAGATGCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGTTTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATGCTTTCTGTTTGGTTAAAAGCTCAGATCCAGAAGGTCTTAGAGAGGCCGTTCTGTATTTCCGTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTTTAATAATCGCACTGAGGAATTGCTTGCGTNNTTAAAATTTGAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13059#1 AGGACCCGGGGAAGCGGGACGCGGCGCAGTGGGAGCACGTGTACCGGATGAAGGAGCGGT GCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCG ACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCG ACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCC CCGATTCGATCCGGAATAGATGCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGT TTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATG CTTTCTGTTTGGTTAAAAGCTCAGATCCAGAAGGTCTTAGAGAGGCCGTTCTGTATTTCC GTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTTTAATAATCGCACTGAG GAATTGCTTGCGTCATTAAAATTTGAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13059#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 334
fasta sequence
                              [AGAGAGGAGATCAGGAGGAGGGGAAGAGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGGAGGACCCGGGGAAGCGGGACCGNCGCACGGGGAGCACGTGTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCTCCCGCTCCGCCCTACGGTTCTGGACTTCGACCGCTTCANTTCCCAGTCTCCTTGGGATCCCCANATCAGCACGTNCCCGGCCGCCGCGACCCTTACGACGACGTCCTCCACCGCATTTTCAACCACCCCTTCTTCCTTCCTGATCCCCCNTTTGATTCGGAA]

[+] EMBL AU030002             [AGAGAGGAGATCAGGAGGAGGGGAAGAGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGGAGGACCCGGGGAAGCGGGACCGNCGCACGGGGAGCACGTGTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCTCCCGCTCCGCCCTACGGTTCTGGACTTCGACCGCTTCANTTCCCAGTCTCCTTGGGATCCCCANATCAGCACGTNCCCGGCCGCCGCGACCCTTACGACGACGTCCTCCACCGCATTTTCAACCACCCCTTCTTCCTTCCTGATCCCCCNTTTGATTCGGAA]


>consensus_13059#2 AGAGAGGAGATCAGGAGGAGGGGAAGAGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGC GGAGAACCTGATCCTGCGGATGATGGAGGACCCGGGGAAGCGGGACCGNCGCACGGGGAG CACGTGTACCGGATGAAGGAGCGGTGCGAGCGCACCAAGGCGGCGTGGAGCTCCCGCTCC GCCCTACGGTTCTGGACTTCGACCGCTTCANTTCCCAGTCTCCTTGGGATCCCCANATCA GCACGTNCCCGGCCGCCGCGACCCTTACGACGACGTCCTCCACCGCATTTTCAACCACCC CTTCTTCCTTCCTGATCCCCCNTTTGATTCGGAA



consensusID : consensus_13059#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 325
fasta sequence
                              [CCTCCTCCTCCTGATCCCCCGATTTCGATCCGGAATTAGATCCCGCTTCGCTAGAGGAAGTGTGGTCCCCATAAGAAACCCCCTTTCCACTCCCAATGACGTTCTTTGAAAATTTTACCCTTGAACCTACCCGCTGCCTTTGGTCATAATGCTTTCTGTTTGGTTATAAAGCTCAGATCCCCGAAGGTCTTAGAGAGCCCGCTTCTGTATTTCCCGCTTCTTGATTTTACTGTTCTGTATGGCTGTACCACCCGAAGGTTTTAATAATCNCCCTGAGGAATTGCTTGCGTCATTAAAATTTGAAAACCNTTCCCATTGTTGTGGT]

[+] EMBL BQ907966             [CCTCCTCCTCCTGATCCCCCGATTTCGATCCGGAATTAGATCCCGCTTCGCTAGAGGAAGTGTGGTCCCCATAAGAAACCCCCTTTCCACTCCCAATGACGTTCTTTGAAAATTTTACCCTTGAACCTACCCGCTGCCTTTGGTCATAATGCTTTCTGTTTGGTTATAAAGCTCAGATCCCCGAAGGTCTTAGAGAGCCCGCTTCTGTATTTCCCGCTTCTTGATTTTACTGTTCTGTATGGCTGTACCACCCGAAGGTTTTAATAATCNCCCTGAGGAATTGCTTGCGTCATTAAAATTTGAAAACCNTTCCCATTGTTGTGGT]


>consensus_13059#3 CCTCCTCCTCCTGATCCCCCGATTTCGATCCGGAATTAGATCCCGCTTCGCTAGAGGAAG TGTGGTCCCCATAAGAAACCCCCTTTCCACTCCCAATGACGTTCTTTGAAAATTTTACCC TTGAACCTACCCGCTGCCTTTGGTCATAATGCTTTCTGTTTGGTTATAAAGCTCAGATCC CCGAAGGTCTTAGAGAGCCCGCTTCTGTATTTCCCGCTTCTTGATTTTACTGTTCTGTAT GGCTGTACCACCCGAAGGTTTTAATAATCNCCCTGAGGAATTGCTTGCGTCATTAAAATT TGAAAACCNTTCCCATTGTTGTGGT



consensusID : consensus_13059#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 324
fasta sequence
                              [CCGTTTTCCTGATCCCCCGATTCGATCCGGAATAGATNCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGTTTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATGCTTTCTGTTTGGTTAAAAGCTCAGATCCAGAAGGTCTTAGAGAGGCCGTTCTGTATTTCCGTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTTTAATAATCGCACTGAGGAATTGCTTGCGTCATTAAAATTTGAAAACCATTCCAATTGTTGTGGTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU031944             [CCGTTTTCCTGATCCCCCGATTCGATCCGGAATAGATNCCGTTCGTGAGGAAGTGTGGTCGCAATAAGAAACCCGTTTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACCGTGCTTTGGTCATATGCTTTCTGTTTGGTTAAAAGCTCAGATCCAGAAGGTCTTAGAGAGGCCGTTCTGTATTTCCGTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTTTAATAATCGCACTGAGGAATTGCTTGCGTCATTAAAATTTGAAAACCATTCCAATTGTTGTGGTAAAAAAAAAAAAAAAAAAAA]


>consensus_13059#4 CCGTTTTCCTGATCCCCCGATTCGATCCGGAATAGATNCCGTTCGTGAGGAAGTGTGGTC GCAATAAGAAACCCGTTTCCATCCAAATGACGTCTTTGAAAATTTTATCCTTGAACTACC GTGCTTTGGTCATATGCTTTCTGTTTGGTTAAAAGCTCAGATCCAGAAGGTCTTAGAGAG GCCGTTCTGTATTTCCGTTCTTGATTTTACTGTTCTGTATGGCTGTACCACAGAAGGTTT TAATAATCGCACTGAGGAATTGCTTGCGTCATTAAAATTTGAAAACCATTCCAATTGTTG TGGTAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13059#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 277
fasta sequence
                              [GTCAGCCACCACCCACCGAGACCGANGAAGAAGAAGAGAGNAGATCAGGAGGAGGGAAAGANGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGAATCCTGCGNATGATGGAGGACCCGGGGAAGCGGNACGCGGACGCANGGAAAGCACGTNTACCGGATGAAGGAGCGGTGAGAGCGCACCAAGACNGCGTGGAGCCTCCCGCTCCNCCCCTACGACTTCTGGACCTTCGACCGATTCAACTCCCAACTCTCCTGGGATCCCCAG]

[+] EMBL OSC30921             [GTCAGCCACCACCCACCGAGACCGANGAAGAAGAAGAGAGNAGATCAGGAGGAGGGAAAGANGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGAATCCTGCGNATGATGGAGGACCCGGGGAAGCGGNACGCGGACGCANGGAAAGCACGTNTACCGGATGAAGGAGCGGTGAGAGCGCACCAAGACNGCGTGGAGCCTCCCGCTCCNCCCCTACGACTTCTGGACCTTCGACCGATTCAACTCCCAACTCTCCTGGGATCCCCAG]


>consensus_13059#5 GTCAGCCACCACCCACCGAGACCGANGAAGAAGAAGAGAGNAGATCAGGAGGAGGGAAAG ANGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGAATCCTGCGNATGATG GAGGACCCGGGGAAGCGGNACGCGGACGCANGGAAAGCACGTNTACCGGATGAAGGAGCG GTGAGAGCGCACCAAGACNGCGTGGAGCCTCCCGCTCCNCCCCTACGACTTCTGGACCTT CGACCGATTCAACTCCCAACTCTCCTGGGATCCCCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13059#3      ------------------------------------------------------------
consensus_13059#4      ------------------------------------------------------------
consensus_13059#1      ------------------------------------------------------------
consensus_13059#0      GTCAGCCACCACCCACCGCGACCGAGGAAGAAGAAGAAAAGAGATCAGGAGGAGGGGAAG 60
consensus_13059#2      ------------------------------------------------------------
consensus_13059#5      ------------------------------------------------------------
                                                                                   

consensus_13059#3      ------------------------------------------------------------
consensus_13059#4      ------------------------------------------------------------
consensus_13059#1      ------------------------------------------------------------
consensus_13059#0      AGGAAGTAGGGATGGGTTTCGTGATGGAGTTCGCGGAGAACCTGATCCTGCGGATGATGG 120
consensus_13059#2      ------------------------------------------------------------
consensus_13059#5      ------------------------------------------------------------
                                                                                   

consensus_13059#3      ------------------------------------------------------------
consensus_13059#4      ------------------------------------------------------------
consensus_13059#1      AGGACCCGGGGAAGCGGGACGCGGCGCAGTGGGAGCACGTGTACCGGATGAAGGAGCGGT 60
consensus_13059#0      AGGACCCGGGGAAGCGGGACGCGGCGCAGCGGGAGCACGTGTACCGGATGAAGGAGCGGT 180
consensus_13059#2      ------------------------------------------------------------
consensus_13059#5      ------------------------------------------------------------
                                                                                   

consensus_13059#3      ------------------------------------------------------------
consensus_13059#4      ------------------------------------------------------------
consensus_13059#1      GCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCG 120
consensus_13059#0      GCGAGCGCACCAAGGCGGCGTGGAGCCTCCCGCTCCGCCCCTACGGCTTCTGGACCTTCG 240
consensus_13059#2      ------------------------------------------------------------
consensus_13059#5      ------------------------------------------------------------
                                                                                   

consensus_13059#3      ------------------------------------------------------------
consensus_13059#4      ------------------------------------------------------------
consensus_13059#1      ACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCG 180
consensus_13059#0      ACCGCTTCAACTCCCAGCTCTCCTGGGATCCCCAGATCAGCCACGCCCCCGGCCGCCGCG 300
consensus_13059#2      ------------------------------------------------------------
consensus_13059#5      ------------------------------------------------------------
                                                                                   

consensus_13059#3      ------------------------------------------CCTCCTCCTCCTGATCCC 18
consensus_13059#4      --------------------------------------------CCGTTTTCCTGATCCC 16
consensus_13059#1      ACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCC 240
consensus_13059#0      ACCCCTACGACGACGTCCTCCACCGCCACTCCAACCCACCCCCCTCCTCCTCCTGATCCC 360
consensus_13059#2      ------------------------------------------------------------
consensus_13059#5      ---------------------------------------------GTCAGCCACCACCCA 15
                                                                                   

consensus_13059#3      CCGATTTCGATCCGGAATTAGATCCCGCTTCGCTAGAGGAAGTGTGGTCCCCATAAGAAA 78
consensus_13059#4      CCGATT-CGATCCGGAAT-AGATNCCG-TTCGT--GAGGAAGTGTGGTCGCAATAAGAAA 71
consensus_13059#1      CCGATT-CGATCCGGAAT-AGATGCCG-TTCGT--GAGGAAGTGTGGTCGCAATAAGAAA 295
consensus_13059#0      CCGATT-CGATCCGGAAT-AGATGCCG-TTCGT--GAGGAAGTGTGGTCGCAATAAGAAA 415
consensus_13059#2      -------------------AGAGAGGAGATCAG--GAGGAGGGGAAGAGGAAGTAGGGA- 38
consensus_13059#5      CCGAGACCGANGAAGAAGAAGAGAGNAGATCAG--GAGGAGGGAAAGANGAAGTAGGGA- 72
                                          ***       **    ***** *    *      ** * * 

consensus_13059#3      CCCCCTTTCCACTCCCAATGACGTTCTTTGAAAATTTTACCCTTGAACCTACCCGCTGCC 138
consensus_13059#4      CCCG-TTTCCA-TCCAAATGACGT-CTTTGAAAATTTTATCCTTGAACTACCGTGCT--- 125
consensus_13059#1      CCCG-TTTCCA-TCCAAATGACGT-CTTTGAAAATTTTATCCTTGAACTACCGTGCT--- 349
consensus_13059#0      CCCG-TTTCCA-TCCAAATGACGT-CTTTGAAAATTTTATCCTTGAACTACCGTGCT--- 469
consensus_13059#2      --TGGGTTTCG----TGATGGAGTTCGCGGAGAACCTGA-TCCTGCGGATGATGGAGGAC 91
consensus_13059#5      --TGGGTTTCG----TGATGGAGTTCGCGGAGAACCTGAATCCTGCGNATGATGGAGGAC 126
                             ** *       ***  ** *   ** **  * *  * **         *     

consensus_13059#3      TTTGGTCATAATGCTTTCTGTTTGGTTATAAAGCTCAGATCCCCGA--AGGTCTTAGAGA 196
consensus_13059#4      -TTGGTCATA-TGCTTTCTGTTTGGTTA-AAAGCTCAGATCCA-GA--AGGTCTTAGAGA 179
consensus_13059#1      -TTGGTCATA-TGCTTTCTGTTTGGTTA-AAAGCTCAGATCCA-GA--AGGTCTTAGAGA 403
consensus_13059#0      -TTGGTCATA-TGCTTTCTGTTTGGTTA-AAAGCTCAGATCCA-GA--AGGTCTTAGAGA 523
consensus_13059#2      -CCGGGGAAG-CGGGACC--GNCGCACGGGGAGCACGTGTACCGGATGAAGGAGCGGTGC 147
consensus_13059#5      -CCGGGGAAG-CGGNACGCGGACGCANGGAAAGCACGTNTACCGGATGAAGGAGCGGTGA 184
                          **  *    *          *       *** *   * *  **  * *     * * 

consensus_13059#3      GCCCGCTTCTGTATTTCCCGCTTCTTGATTTTACTGTTCTGTAT-GGCTGTACCACCCGA 255
consensus_13059#4      GGCCG-TTCTGTATTTCCG--TTCTTGATTTTACTGTTCTGTAT-GGCTGTACCACA-GA 234
consensus_13059#1      GGCCG-TTCTGTATTTCCG--TTCTTGATTTTACTGTTCTGTAT-GGCTGTACCACA-GA 458
consensus_13059#0      GGCCG-TTCTGTATTTCCG--TTCTTGATTTTACTGTTCTGTAT-GGCTGTACCACA-GA 578
consensus_13059#2      GAGCGCACCAAGGCGGCGTGGAGC-TCCCGCTCCGCCC-TACGG-TTCTGGAC-TTC-GA 202
consensus_13059#5      GAGCGCACCAAGACNGCGTGGAGCCTCCCGCTCCNCCCCTACGACTTCTGGACCTTC-GA 243
                       *  **   *       *      * *     * *     *       *** **     **

consensus_13059#3      AGGTTTTAATAATCN--CCCTGAGGAATTGCTTGCGTCATTAAAATTTGAAAACCNTTCC 313
consensus_13059#4      AGGTTTTAATAATCG--CACTGAGGAATTGCTTGCGTCATTAAAATTTGAAAACCATTCC 292
consensus_13059#1      AGGTTTTAATAATCG--CACTGAGGAATTGCTTGCGTCATTAAAATTTGAAAAAAAAAAA 516
consensus_13059#0      AGGTTTTAATAATCG--CACTGAGGAATTGCTTGCGTCATTAAA-TTTGAAAACATT--C 633
consensus_13059#2      CCGCTTCANTTCCCAGTCTCCTTGGGATCCCCANATCAGCACGTNCCCGGCCGCCGCGAC 262
consensus_13059#5      CCGATTCAACTCCCAACTCTCCTGGGATCCCCAG-------------------------- 277
                         * ** *     *         ** **  *                             

consensus_13059#3      CATTGTTGTGGT------------------------------------------------ 325
consensus_13059#4      AATTGTTGTGGTAAAAAAAAAAAAAAAAAAAA---------------------------- 324
consensus_13059#1      AAAAAAAAAAAAAAA--------------------------------------------- 531
consensus_13059#0      AATTGNTGTGGTATCNAAGCTTGCTAGGGCATTTTCGGTGCNNNNNNNNNNN-------- 685
consensus_13059#2      CCTTACGACGACGTCCTCCACCGCATTTTCAACCACCCCTTCTTCCTTCCTGATCCCCCN 322
consensus_13059#5      ------------------------------------------------------------
                                                                                   

consensus_13059#3      ------------
consensus_13059#4      ------------
consensus_13059#1      ------------
consensus_13059#0      ------------
consensus_13059#2      TTTGATTCGGAA 334
consensus_13059#5      ------------
                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)