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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13065#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 4246 fasta sequence
[CTCCAGATCCCCTTCCTCTCTCTCGATCGCCGCCGCCTCCTCGATTCTCAGCGCGCGACGCAATCTATCCCCCCGGCTCCCGCGCTTCTCCCCTCCCTCCCGCGCGGTTCCCGCGCTTCTCCTCTCCCTCTCCCGCTCGCGAAATTGCCTACCTATATGACAGAGAAATCCAGTTGCTCCAAAATTCCCCATCGCCATATTCCGCCGCTTCCGATCTCCCTCTTCCGCCGGCCACCGAATCGACAGCCACCTCGACCACAGACCCGCTCCTCTTCCACCTTGTATAATCTCTCCCGCCCCCGCAAGAAATTCCTGCCTAAAACCCTAGTTCCCCACCACCAACACCATGTCTCGTCGGAGGAAGAGGGAGGTAGCGCCGCCTCCTCAGGCCGTCGTGAGCTCTACTGCTCCATTCGCTGTTCCTACGTCGCAGGCAGCGCCATATCCATATGGGGGTCTCGGGTTCCCGCCGCCACCGACAGCTTGGCTTGCTTCTCCACAGCCACAAGCCATGCCTGGCTCTTCTGCTTTCCATCCTCCTGCGGCCGGCAAGACTGATGTGCATCCTGATCTTGAAGAATGGTATGTCTGTCAATTGGCTTTGTTAGTTCTGAATTTGCCATGCTGATTACTCCTTTTAGTGCTAAATAAAAAAAAAGAGCATGTACTGATTTACTTATTTAAGTGATGTTTCTTTGAAAAACAAAGTTACAAAGCATGCACTGAATTCTATTTAGGCTAATAAGATTTGATATCCATTTGTGACTGAAATCTGAAACAATTTGATTGTGGTTATTGCACTGAAATTTTACAGATATTGTTTGCATTTAAAAATTGTTGACATAAGTGACCACAAGCTATAAGTTTCGGTGGGATCATAATAAAAACCTGAAACAATTTGATTCGATTTTCTTGCACCTAAACACATGCAACCCATCATTCCAAATTTAAGCACACAATGTTCAGAATTATATTTCTAATCAGCATGGCCAGTGGCGAATTCACCTCCCGTGCAGCTGCCCGGGCTTCACAGCGACGATCCTTCGCTAAAATAGATTAATTCCCGGGCAGTGTGTATGCTAGTTAGAGGTAATAACGGCAAGCATGTAGGCTGCAACCGACACTTGGGTTAGGCCTCGGCTGCCTATGGCATGCATGCCTCACAAGTACTAGCCTCAATGCGTCACACGGACATGTACAGAAGCATTGAACAACTTGCTAAGTTTTAATTCTAATACCAGTTCCTTGAATGAATAGACTAACTTATTGTTGCTAGAGTTTCAGGCATAATGTAATATTTAGATGATATATATGAGATAAGTCTTAAAATAACAGAGTTACATATAAGATAAGTCTTAAAATATCACAATGTTAATTTTTATGGCTTTATACAAAAAAAATGAACATATTTAAATATTGTAGCAGTTTATTTGTTAGCTAGCCTTGCCCAGGCAGTTTATTCAGTTGAACTGGTCCCCAACAAAATAAATTGGCTGTCTTTTTAATAAAAACCCAATAGATTAGTGGGCTTCTGCTATACCTTGTTTGCACCAATGTAGTATAGGCTCGTCTGTTAGCCCTTTGTACTGGATGAGTGCATGTTTATTTTAGTAGTGTATAGAACTCCATTTACAAACTGAATGGCCATTTTCTTGTTAAAATATTATATTATTCGGACACAACTTGAACAAGATTTGCATGTTCATGTGTTCTATACGGGGGGTTGAATCTCGTCCGCCCGGCGGTTTCGTTAATTTTATCAATACCCCATCAAACCATGTCCATCATGTGGCCGAAGGGAGTCCATCACAGCCCATCAATGTTGTGAATGGACATGTCGCTAGGACTGATAAGCGCTTGTCATGGATGAAGGATGAAGACTTGAGATTGATCAGTGCTTGGCTGAACAACTCAAATGATCCTATAGAATCGAATTTCAAGAAGAATGATAAATATTGGGGCGATGTAGCTGCAGCTTACAACAGCACTACACCAAAAAACCGAGCTAGACTAGTTAAGCAAGTTAAGGATCGTTTTGGTAAAATTAGGAAGAAGGTCGGGAATTTTTGTTGCTCTTGGAAGGAGGTTAATTCATTATATGCTAGTGGGGAGTCTAATGAAGATCTGATGAACAAGGCACAGAAAATATATGAGAATGACTTCAAGGATGGTCCATTCTTGTTTATGCACTGTTGGAATGAACTAAAAAAACAACCAAAGTGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGATGTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAGGCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGATGACATCCGTAAGTTTATGGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTAGAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACAGCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGATATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAATCAGTGAGACTCCTTTGCTACTCGCATCGTAGAGAAGATCAAGACCAAGTTTGCAGCTGGGCTACTCAAGCGCTAAAGTGGAACTAGGAAGACCATTGCAAGGGATCATGAAGAAGGTCACCGACGTCTAGTGGCTGATTACTTTGCAAATCAGCCACTCTACCCTGAGAGAATGTTTCGCACAAGATTTCGTATGCGAAAGCATCTCTTTTTACGTATCGTGCAAGCCTTAGGTCAATGGTCTCCATACTTTACTCAAAGAGAAGATTGTTCTGGTCGCACTGGCCTTTCTCCACTTCAGAAGTGCACAGCAGCGATCCGTATGTTAGCATATGGCACTCCTGCTGATGCTTTAGATGAATACTTGCTAATTGGCAAAAGCACTTCCTTAGAGTGCTTGGACACTTTTGCACGAGGGGTAGTTGAGGTCTTTGGTGGGCAATACTTGCGACGGCCCACAAGTGAGGATATAGATCATATACTACAAGTTAATGAATCTCGTGGCTTTCCGGGTATGTTAGGAAGTATTGATTGCATGCACTGGAGGTGGGAGAGTTGTCCGAGAGCTTGGAGGGGACAATTCACCCGTGGTGACTATAAAGTCCTAACAATTATCCTTGAAGCGGTTGCGTCATATGACCTTTGGATTTGGCATGCTTTCTTTGGTGTCGCTGGTTCTAACAACGATATAAATGTGCTGAATCAGTCCCCTTTATTCCTTGAACAAGTGAGAGGGGAGGCTCCTCGGGTTCATTTTTCTGTAAATGGGAATGAGTACAACAATGGGTACTACCTTGCTGATGGTATATACCCAGAATGGGCCAGCTTCATGAAGACGATATCACTTCCACAAATAGAGAAGCATAAATTGTTTGCTGAACGTCAAGAAGGTGCAAGGAAAGATGTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCCAGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCATAATATGATTGTTGAAGACGAGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTCTGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAATGATTTAATTGAGCATATTTGGAATCGGTTTGGAAATAGGCAGTCAACATAAACATGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK065944 [CTCCAGATCCCCTTCCTCTCTCTCGATCGCCGCCGCCTCCTCGATTCTCAGCGCGCGACGCAATCTATCCCCCCGGCTCCCGCGCTTCTCCCCTCCCTCCCGCGCGGTTCCCGCGCTTCTCCTCTCCCTCTCCCGCTCGCGAAATTGCCTACCTATATGACAGAGAAATCCAGTTGCTCCAAAATTCCCCATCGCCATATTCCGCCGCTTCCGATCTCCCTCTTCCGCCGGCCACCGAATCGACAGCCACCTCGACCACAGACCCGCTCCTCTTCCACCTTGTATAATCTCTCCCGCCCCCGCAAGAAATTCCTGCCTAAAACCCTAGTTCCCCACCACCAACACCATGTCTCGTCGGAGGAAGAGGGAGGTAGCGCCGCCTCCTCAGGCCGTCGTGAGCTCTACTGCTCCATTCGCTGTTCCTACGTCGCAGGCAGCGCCATATCCATATGGGGGTCTCGGGTTCCCGCCGCCACCGACAGCTTGGCTTGCTTCTCCACAGCCACAAGCCATGCCTGGCTCTTCTGCTTTCCATCCTCCTGCGGCCGGCAAGACTGATGTGCATCCTGATCTTGAAGAATGGTATGTCTGTCAATTGGCTTTGTTAGTTCTGAATTTGCCATGCTGATTACTCCTTTTAGTGCTAAATAAAAAAAAAGAGCATGTACTGATTTACTTATTTAAGTGATGTTTCTTTGAAAAACAAAGTTACAAAGCATGCACTGAATTCTATTTAGGCTAATAAGATTTGATATCCATTTGTGACTGAAATCTGAAACAATTTGATTGTGGTTATTGCACTGAAATTTTACAGATATTGTTTGCATTTAAAAATTGTTGACATAAGTGACCACAAGCTATAAGTTTCGGTGGGATCATAATAAAAACCTGAAACAATTTGATTCGATTTTCTTGCACCTAAACACATGCAACCCATCATTCCAAATTTAAGCACACAATGTTCAGAATTATATTTCTAATCAGCATGGCCAGTGGCGAATTCACCTCCCGTGCAGCTGCCCGGGCTTCACAGCGACGATCCTTCGCTAAAATAGATTAATTCCCGGGCAGTGTGTATGCTAGTTAGAGGTAATAACGGCAAGCATGTAGGCTGCAACCGACACTTGGGTTAGGCCTCGGCTGCCTATGGCATGCATGCCTCACAAGTACTAGCCTCAATGCGTCACACGGACATGTACAGAAGCATTGAACAACTTGCTAAGTTTTAATTCTAATACCAGTTCCTTGAATGAATAGACTAACTTATTGTTGCTAGAGTTTCAGGCATAATGTAATATTTAGATGATATATATGAGATAAGTCTTAAAATAACAGAGTTACATATAAGATAAGTCTTAAAATATCACAATGTTAATTTTTATGGCTTTATACAAAAAAAATGAACATATTTAAATATTGTAGCAGTTTATTTGTTAGCTAGCCTTGCCCAGGCAGTTTATTCAGTTGAACTGGTCCCCAACAAAATAAATTGGCTGTCTTTTTAATAAAAACCCAATAGATTAGTGGGCTTCTGCTATACCTTGTTTGCACCAATGTAGTATAGGCTCGTCTGTTAGCCCTTTGTACTGGATGAGTGCATGTTTATTTTAGTAGTGTATAGAACTCCATTTACAAACTGAATGGCCATTTTCTTGTTAAAATATTATATTATTCGGACACAACTTGAACAAGATTTGCATGTTCATGTGTTCTATACGGGGGGTTGAATCTCGTCCGCCCGGCGGTTTCGTTAATTTTATCAATACCCCATCAAACCATGTCCATCATGTGGCCGAAGGGAGTCCATCACAGCCCATCAATGTTGTGAATGGACATGTCGCTAGGACTGATAAGCGCTTGTCATGGATGAAGGATGAAGACTTGAGATTGATCAGTGCTTGGCTGAACAACTCAAATGATCCTATAGAATCGAATTTCAAGAAGAATGATAAATATTGGGGCGATGTAGCTGCAGCTTACAACAGCACTACACCAAAAAACCGAGCTAGACTAGTTAAGCAAGTTAAGGATCGTTTTGGTAAAATTAGGAAGAAGGTCGGGAATTTTTGTTGCTCTTGGAAGGAGGTTAATTCATTATATGCTAGTGGGGAGTCTAATGAAGATCTGATGAACAAGGCACAGAAAATATATGAGAATGACTTCAAGGATGGTCCATTCTTGTTTATGCACTGTTGGAATGAACTAAAAAAACAACCAAAGTGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGATGTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAGGCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGATGACATCCGTAAGTTTATGGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTAGAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACAGCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGATATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAATCAGTGAGACTCCTTTGCTACTCGCATCGTAGAGAAGATCAAGACCAAGTTTGCAGCTGGGCTACTCAAGCGCTAAAGTGGAACTAGGAAGACCATTGCAAGGGATCATGAAGAAGGTCACCGACGTCTAGTGGCTGATTACTTTGCAAATCAGCCACTCTACCCTGAGAGAATGTTTCGCACAAGATTTCGTATGCGAAAGCATCTCTTTTTACGTATCGTGCAAGCCTTAGGTCAATGGTCTCCATACTTTACTCAAAGAGAAGATTGTTCTGGTCGCACTGGCCTTTCTCCACTTCAGAAGTGCACAGCAGCGATCCGTATGTTAGCATATGGCACTCCTGCTGATGCTTTAGATGAATACTTGCTAATTGGCAAAAGCACTTCCTTAGAGTGCTTGGACACTTTTGCACGAGGGGTAGTTGAGGTCTTTGGTGGGCAATACTTGCGACGGCCCACAAGTGAGGATATAGATCATATACTACAAGTTAATGAATCTCGTGGCTTTCCGGGTATGTTAGGAAGTATTGATTGCATGCACTGGAGGTGGGAGAGTTGTCCGAGAGCTTGGAGGGGACAATTCACCCGTGGTGACTATAAAGTCCTAACAATTATCCTTGAAGCGGTTGCGTCATATGACCTTTGGATTTGGCATGCTTTCTTTGGTGTCGCTGGTTCTAACAACGATATAAATGTGCTGAATCAGTCCCCTTTATTCCTTGAACAAGTGAGAGGGGAGGCTCCTCGGGTTCATTTTTCTGTAAATGGGAATGAGTACAACAATGGGTACTACCTTGCTGATGGTATATACCCAGAATGGGCCAGCTTCATGAAGACGATATCACTTCCACAAATAGAGAAGCATAAATTGTTTGCTGAACGTCAAGAAGGTGCAAGGAAAGATGTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCCAGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCATAATATGATTGTTGAAGACGAGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTCTGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAATGATTTAATTGAGCATATTTGGAATCGGTTTGGAAATAGGCAGTCAACATAAACATGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAtctgttgtt ]
[+] EMBL CB648181 [ AATATTTCGATGATATATATGAGATAAGTCTTAAAATAACAGAGTTACATATAAGATAAGTCTTAAAATATCACAATGTTAATTTTTATGGCTTTATACAAAAAAAATGAACATATTTAAATATTGTAGCAGTTTATTTGTTAGCTAGCCTTGCCCAGGCAGTTTATTCAGTTGAACTGGTCCCCAACAAAATAAATTGGCTGTCTTTTTAATAAAAACCCAATAGATTAGTGGGCTTCTGCTATACCTTGTTTGCACCAATGTAGTATAGGCTCGTCTGTTAGCCCTTTGTACTGGATGAGTGCATGTTTATTTTAGTAGTGTATAGAACTCCATTTACAAACTGAATGGCCATTTTCTTGTTAAAATATTATATTATTCGGACACAACTTGAACAAGATTTGCATGTTCATGTGTTCTATACGGGGGGTTGAATCTCGTCCGCCCGGCGGTTTCGTTAATTTTATCAATACCCCATCAAACCATGTCCATCATGTGGCCGAAGGGAGTCCATCACAGCCCATCAATGTTGTGAATGGACATGTCGCTAGGACTGATAAGCGCTTGTCATGGATGAAGGATGAAGACTTGAGATTGATCAGTGCTTGGCTGAACAACTCAAATGATCCTATAGAATCGAATTTCAAGAAGAATGATAAATATTGGGGCGATGTAGCTGCAGCTTACAACAGCACTACACCAAAAAACCGAGCTAGACTAGTTAAGCAAGTTAAGGATCGTTTTGGT ]
[+] EMBL AU182714 [ TCACAATGTTAATTTTTATGGCTTTATACAAAAAAAATGAACATATTTAAATATTGTAGCAGTTTATTTGTTAGCTAGCCTTGCCCAGGCAGTTTATTCAGTTGAACTGGTCCCCAACAAAATAAATTGGCTGTCTTTTTAATAAAAACCCAATAGATTAGTGGGCTTCTGCTATACCTTGTTTGCACCAATGTAGTATAGGCTCGTCTGTTAGCCCTTTGTACTGGATGAGTGCATGTTTATTTTAGTAGTGTATAGAACTCCATTTACAAACTGAATGGCCATTTTCTTGTTAAAATATTATATTATTCGGACACAACTTGAACAAGATTTGCATGTTCATGTGTTCTATACGGGGGGTTGAATCTCGTCCGCCCGGCGGTTTCGTTAATTTTATCAATACCCCATCAAACCATG ]
[+] EMBL AU068685 [ GCAATACTTGCGACGGCCCACAAGTGAGGATATAGATCATATACTACAAGTTAATGAATCTCGTGGCTTTCCGGGTATGTTAGGAAGTATTGATTGCATGCACTGGAGGNGGGAGAGTTGTCCGAGAGCTTNGAGGGGACAATTCACCCGTGGTGACTATAAAGTCCTAACAATTATCCTTGAAGCGGTTGCGTCATATGACCTTTGGATTTGGCATGCTTTCTTTGGTGTCGCTGGTTCTAACAACGATATAAATGTGCTGAATCAGTCCCCTTTATTCCTTGAACAAGTG GAG ]
[+] EMBL CF329035 [ GGGACAATTCACCCGTGGTGACTATAAAGTCCTAACAATTATCCTTGAAGCGGTTGCGTCATATGACCTTTGGATTTGGCATGCTTTCTTTGGTGTCGCTGGTTCTAACAACGATATAAATGTGCTGAATCAGTCCCCTTTATTCCTTGAACAAGTGAGAGGGGAGGCTCCTCGGGTTCATTTTTCTGTAAATGGGAATGAGTACAACAATGGGTACTACCTTGCTGATGGTATATACCCAGAATGGGCCAGCTTCATGAAGACGATATCACTTCCACAAATAGAGAAGCATAAATTGTTTGCTGAACGTCAAGAAGGTGCAAGGAAAGATGTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCCAGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCATAATATGATTGTTGAAGACGTGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTCTGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAATGATTTAATTGAGCAT ]
[+] EMBL AU068684 [ GCTGAACGTCAAGAAGGTGCAAGGAAAGATGTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCCAGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCATAATATGATTGTTGAAGACGAGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTCTGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAATGATTTAATTGAGCATATTTGGAATCGGTTTGGAAATAGGCAGTCAACATAAACATGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAAAAAAAAAAAA ]
[-] EMBL CF329036 [ GTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCCAGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCATAATATGATTGTTGAAGACGTGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTCTGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAATGATTTAATTGAGCATATTTGGAATCGGTTTGGAAATAGGCAGTCAACATAAACATGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAA ]
[-] EMBL CF327879 [ gtgaGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCCCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAAAA ]
[+] EMBL CF327878 [ gtgaGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCCCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAAA ]
[+] EMBL AU078754 [ GTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAANAGTCTCTCTTTGATTANATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCNCATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTANACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGCTATGGTATTTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_13065#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 765 fasta sequence
[GAACTAAAAAAACAACCAAAGTGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGATGTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAGGCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGATGACATCCGTAAGTTTAT-GGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTAGAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACAGCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGATATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAATCAGTGAGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTAGGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGAGGATCCATTAATCTACTTGCTATGGTATTTTATT]
[-] EMBL CB648182 [GAACTAAAAAAACAACCAAAGTGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGATGTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAGGCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGATGACATCCGTAAGTTTAT GGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTAGAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACAGCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGATATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAATCAGTGAGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGCAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTAGGTTTTGTTTTATCCTCTATTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGAGGATCCATTAATCTACTTGCTATGGTATTTTATT]
[+] EMBL BI807291 [ gcCAACNTA TTGCAAAGAAAAGACCAA GTCCAAGTTTGTACAACTGAGCTTGAGGATGACATCCGTAAGTTTATGGGATGCGCATGCAGCAACCAAGGAA GGC AAATGAAGTGTTAGAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCC AAAAGCTTAGTCGCCAGACAGCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGATATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAATCAGTGAGGAAGATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGGC ATGGTCATATGATGCAATGGTTCAATGAAGAGTCTATCTTTGATTAGATGAAGAAATCG TATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTAaaaaaaaaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13065#0 CTCCAGATCCCCTTCCTCTCTCTCGATCGCCGCCGCCTCCTCGATTCTCAGCGCGCGACG 60
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CAATCTATCCCCCCGGCTCCCGCGCTTCTCCCCTCCCTCCCGCGCGGTTCCCGCGCTTCT 120
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CCTCTCCCTCTCCCGCTCGCGAAATTGCCTACCTATATGACAGAGAAATCCAGTTGCTCC 180
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 AAAATTCCCCATCGCCATATTCCGCCGCTTCCGATCTCCCTCTTCCGCCGGCCACCGAAT 240
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CGACAGCCACCTCGACCACAGACCCGCTCCTCTTCCACCTTGTATAATCTCTCCCGCCCC 300
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CGCAAGAAATTCCTGCCTAAAACCCTAGTTCCCCACCACCAACACCATGTCTCGTCGGAG 360
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GAAGAGGGAGGTAGCGCCGCCTCCTCAGGCCGTCGTGAGCTCTACTGCTCCATTCGCTGT 420
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TCCTACGTCGCAGGCAGCGCCATATCCATATGGGGGTCTCGGGTTCCCGCCGCCACCGAC 480
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 AGCTTGGCTTGCTTCTCCACAGCCACAAGCCATGCCTGGCTCTTCTGCTTTCCATCCTCC 540
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TGCGGCCGGCAAGACTGATGTGCATCCTGATCTTGAAGAATGGTATGTCTGTCAATTGGC 600
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TTTGTTAGTTCTGAATTTGCCATGCTGATTACTCCTTTTAGTGCTAAATAAAAAAAAAGA 660
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GCATGTACTGATTTACTTATTTAAGTGATGTTTCTTTGAAAAACAAAGTTACAAAGCATG 720
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CACTGAATTCTATTTAGGCTAATAAGATTTGATATCCATTTGTGACTGAAATCTGAAACA 780
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 ATTTGATTGTGGTTATTGCACTGAAATTTTACAGATATTGTTTGCATTTAAAAATTGTTG 840
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 ACATAAGTGACCACAAGCTATAAGTTTCGGTGGGATCATAATAAAAACCTGAAACAATTT 900
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GATTCGATTTTCTTGCACCTAAACACATGCAACCCATCATTCCAAATTTAAGCACACAAT 960
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GTTCAGAATTATATTTCTAATCAGCATGGCCAGTGGCGAATTCACCTCCCGTGCAGCTGC 1020
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CCGGGCTTCACAGCGACGATCCTTCGCTAAAATAGATTAATTCCCGGGCAGTGTGTATGC 1080
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TAGTTAGAGGTAATAACGGCAAGCATGTAGGCTGCAACCGACACTTGGGTTAGGCCTCGG 1140
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CTGCCTATGGCATGCATGCCTCACAAGTACTAGCCTCAATGCGTCACACGGACATGTACA 1200
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GAAGCATTGAACAACTTGCTAAGTTTTAATTCTAATACCAGTTCCTTGAATGAATAGACT 1260
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 AACTTATTGTTGCTAGAGTTTCAGGCATAATGTAATATTTAGATGATATATATGAGATAA 1320
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GTCTTAAAATAACAGAGTTACATATAAGATAAGTCTTAAAATATCACAATGTTAATTTTT 1380
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 ATGGCTTTATACAAAAAAAATGAACATATTTAAATATTGTAGCAGTTTATTTGTTAGCTA 1440
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GCCTTGCCCAGGCAGTTTATTCAGTTGAACTGGTCCCCAACAAAATAAATTGGCTGTCTT 1500
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TTTAATAAAAACCCAATAGATTAGTGGGCTTCTGCTATACCTTGTTTGCACCAATGTAGT 1560
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 ATAGGCTCGTCTGTTAGCCCTTTGTACTGGATGAGTGCATGTTTATTTTAGTAGTGTATA 1620
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GAACTCCATTTACAAACTGAATGGCCATTTTCTTGTTAAAATATTATATTATTCGGACAC 1680
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 AACTTGAACAAGATTTGCATGTTCATGTGTTCTATACGGGGGGTTGAATCTCGTCCGCCC 1740
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GGCGGTTTCGTTAATTTTATCAATACCCCATCAAACCATGTCCATCATGTGGCCGAAGGG 1800
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 AGTCCATCACAGCCCATCAATGTTGTGAATGGACATGTCGCTAGGACTGATAAGCGCTTG 1860
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TCATGGATGAAGGATGAAGACTTGAGATTGATCAGTGCTTGGCTGAACAACTCAAATGAT 1920
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CCTATAGAATCGAATTTCAAGAAGAATGATAAATATTGGGGCGATGTAGCTGCAGCTTAC 1980
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 AACAGCACTACACCAAAAAACCGAGCTAGACTAGTTAAGCAAGTTAAGGATCGTTTTGGT 2040
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 AAAATTAGGAAGAAGGTCGGGAATTTTTGTTGCTCTTGGAAGGAGGTTAATTCATTATAT 2100
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GCTAGTGGGGAGTCTAATGAAGATCTGATGAACAAGGCACAGAAAATATATGAGAATGAC 2160
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TTCAAGGATGGTCCATTCTTGTTTATGCACTGTTGGAATGAACTAAAAAAACAACCAAAG 2220
consensus_13065#1 ---------------------------------------GAACTAAAAAAACAACCAAAG 21
*********************
consensus_13065#0 TGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGAT 2280
consensus_13065#1 TGGCATGCATATTTGGAGCAGCTTGACAAGTCAAACAAAAGGAAGGCAGATTACAATGAT 81
************************************************************
consensus_13065#0 GTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAG 2340
consensus_13065#1 GTTATCCCCCTTGATGATGAAGAAGATATACCACGACCAATAGGAGCCAAGGCATCTAAG 141
************************************************************
consensus_13065#0 GCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGAT 2400
consensus_13065#1 GCGCAACGTAGTTGCAAAGAAAAGAGCAAGGTCCAAGTTTGTACAACTGAGCTTGAGGAT 201
************************************************************
consensus_13065#0 GACATCCGTAAGTTTATGGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTA 2460
consensus_13065#1 GACATCCGTAAGTTTATGGATGCGCATGCAGCAACCAAGGAAGGGCAAAATGAAGTGTTA 261
************************************************************
consensus_13065#0 GAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACA 2520
consensus_13065#1 GAGACCCAAATACGGGTTTCTATTGACAACCATGCAGCCAAAAAGCTTAGTCGCCAGACA 321
************************************************************
consensus_13065#0 GCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGAT 2580
consensus_13065#1 GCTATGATTGAAACCTATCGAGACTTAATGAACAAAGACACAAGGAAGATGCCTGACGAT 381
************************************************************
consensus_13065#0 ATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAAT 2640
consensus_13065#1 ATGAGATCTGAGCTTGTTCACATGCTGAAATGCATGAGAGAAGAGATATTCAACAAAAAT 441
************************************************************
consensus_13065#0 CAGTGAGACTCCTTTGCTACTCGCATCGTAGAGAAGATCAAGACCAAGTTTGCAGCTG-- 2698
consensus_13065#1 CAGTGAGGAAGATGTTCT-CTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGAT 500
******* * * ** ** * * * * *** **
consensus_13065#0 GGCTACTCAAGCGCTAAAGTGGAACTAGGAAGACCATTGCAAGGGATCATGAAGAAGGTC 2758
consensus_13065#1 GGTAGTTCAGGC-----AATGGTCATATGA-------TGCAATGGTTCAATGAAGAGTCT 548
** *** ** * *** ** ** ***** ** *** * **
consensus_13065#0 ACCGACGTCTAGTGGCTGATTACTTTGCAAATCAGCCACTCTACCCTGAGAGAATGTTTC 2818
consensus_13065#1 CTCTTTGATTAGATGAAGAAATCGTTATCTATCTGTTAGA-TAACATATTTATGTATTTT 607
* * *** * ** * ** *** * * ** * * * ***
consensus_13065#0 GCACAAGATTTCGTATGCGAAAGCATCTCTTTTTACGTATCGTGCAAGCCTTAGGTCAAT 2878
consensus_13065#1 GCTTAATGTCACATTGTTTGTGACTTTTGGATTTGTAAACCAT-TAAG---TAGGTT--T 661
** ** * * * * * * *** * * * *** ***** *
consensus_13065#0 GGTCTCCATACTTTACTCAAAGAGAAGATTGTTCTGGT-CGCACTGGCCT-TTCTCCACT 2936
consensus_13065#1 TGTTTT-ATCCTCTA-TTACCTTGTCGGTTATTTAGACATGCACTACCCTATCCTTTTGT 719
** * ** ** ** * * * * ** ** * ***** *** * ** *
consensus_13065#0 TCAGAAGTGCACAGCAGCGATCCGTATGTTAGCATATGGCACTCCTGCTGATGCTTTAGA 2996
consensus_13065#1 TTAGACCTG-GGAGGATCCATTAATCTACTTGC-TATGGTATTT-TATT----------- 765
* *** ** ** * * ** * * * ** ***** * * * *
consensus_13065#0 TGAATACTTGCTAATTGGCAAAAGCACTTCCTTAGAGTGCTTGGACACTTTTGCACGAGG 3056
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GGTAGTTGAGGTCTTTGGTGGGCAATACTTGCGACGGCCCACAAGTGAGGATATAGATCA 3116
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TATACTACAAGTTAATGAATCTCGTGGCTTTCCGGGTATGTTAGGAAGTATTGATTGCAT 3176
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GCACTGGAGGTGGGAGAGTTGTCCGAGAGCTTGGAGGGGACAATTCACCCGTGGTGACTA 3236
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TAAAGTCCTAACAATTATCCTTGAAGCGGTTGCGTCATATGACCTTTGGATTTGGCATGC 3296
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TTTCTTTGGTGTCGCTGGTTCTAACAACGATATAAATGTGCTGAATCAGTCCCCTTTATT 3356
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CCTTGAACAAGTGAGAGGGGAGGCTCCTCGGGTTCATTTTTCTGTAAATGGGAATGAGTA 3416
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CAACAATGGGTACTACCTTGCTGATGGTATATACCCAGAATGGGCCAGCTTCATGAAGAC 3476
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GATATCACTTCCACAAATAGAGAAGCATAAATTGTTTGCTGAACGTCAAGAAGGTGCAAG 3536
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GAAAGATGTGGAGCAGGCTTTTGGGGTATTGCAAGCCCGTTTCAACATTGTACGCCGTCC 3596
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 AGCAAAGAAGTGGAAGCGAAAGAGTGTTGGGAAAATCATGCTAGCTTGTGTGATTCTCCA 3656
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TAATATGATTGTTGAAGACGAGAGAGAGGATGCAATATGTGACATTGACCTCAATAGAAT 3716
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TCCTAGGACATCAATAGTTCTGCCTCCTGAAGTAACTTGTGATGATAACCCATGTTTTTC 3776
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TGATGTGCTACGTAGGAGATCTGCTATTCGTGCTCGTTCAGTCCATACCCAGCTGAAAAA 3836
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TGATTTAATTGAGCATATTTGGAATCGGTTTGGAAATAGGCAGTCAACATAAACATGGAA 3896
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GATGTTCTCTTGTCCAATTCATGGTGCTGAACTTCTTACAGCAAATGATGGTAGTTCAGG 3956
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 CAATGGTCATATGATGCAATGGTTCAATGAAGAGTCTCTCTTTGATTAGATGAAGAAATC 4016
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 GTTATCTATCTGTTAGATAACATATTTATGTATTTTGCTTAATGTCACATTGTTTGTGAC 4076
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TTTTGGATTTGTAAACCATTAAGTATGTTTTGTTTTATCCTCTATTACCTTGTCGGTTAT 4136
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TTAGACATGCACTACCCTATCCTTTTGTTTAGACCTGGGATGATCCATTAATCTACTTGC 4196
consensus_13065#1 ------------------------------------------------------------
consensus_13065#0 TATGGTATTTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4246
consensus_13065#1 --------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||