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Oryza sativa
cluster # 13079 cluster # 13079       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13079#0 length = 1406 sequences # 11  
consensus_13079#1 length = 435 sequences # 1  

consensusID : consensus_13079#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1406
fasta sequence
                              [TCTCTTTTTTTTAATCTTCTAAACTTATTTGCCATTTTTCTCACGTCTCTGCTTTTGGACTAGAAGAGTAAAAGCTTCCCTATTCTAGAAGGCATCTCGTTCTCTTCCAAGTTCCCTATATAATGGGCTCCACGTCTCGCTCTCACACCGCACCGACGCATCAGCTACCTTCTACGCATTAACGCAAACATCTGCACGACACGACACAAGCAATGGCGCCGGCGGCGGAGCCGTA-C-GTGGTGGAGGACTGCCGCGGCGCGGTGCAGCTGATGAGCGACGGCACGGTGCGGCGCAGCGCCGAGCCGGCGTTCCACGTCGACCTGCCCGACGACGCCGACGCCGCCGTCGAGTGGAAGGACGTGACGTACGACGCCGAACACGACCTGAACGCGCGGCTGTACCGGCCGCGCCACCTCGGTGCCGCCAACGACGCGCGCGTCCCCGTCGTCGCCTACTTCCACGGCGGCGGCTTCTGCATCGGCTCCGGCCGGTGGCCCAACTTCCACGCCTGGTGCCTCCGCCTCGCCGCGGAGCTCCCCGCCGTCGTGCTGTCGTTCGACTACCGCCTCGCCCCGGAGCACCGCCTCCCCGCCGCGCAGGAGGACGGCGCCACGGCCATGGCGTGGGTGCGCGACAGCGCCGCGCGCGACCCGTGGCTCGCCGACGCCGCCGACTTCTCCCGGGTGTTCGTCGCCGGCGACTCGGCGGGCGGGAACATCACCCACCACATGGCGGTGCGGTTCGGGAAGGCCGGGCTCGGCCCGCAGGTCCGGCTGCGCGGGCACGTTCTCCTCATGCCGGCCATGGCGGGGGAGACGCGGACGCGCGCCGAGCTGGAGTGCCGCCCCGGCGCGTTCCTCACCGCC-GAGATGA-GC-GACAGGTACGCGCGCCTCATCCTGCCGGGCGGCGCGACGAGGGACTACCCGGTGCTGAACCCCGCCGGGCCGGAGGCGCCGGGGCTGGAGGCGGTGGCGATGGCGCCGTCGCTCGTCGTGGCGG-CGGAGCACGACATCCTCAGGGACCGGAACGAGCACTACGCGCGGCGGATGAGGGAGGAGTGGGGGAAGGAGGTGGCGTTCGTCGAGTTCGCCGGCGAG-CAGCACGGCTTCTTCGAGGTGGATCCGTGGTCGGAGCG-CGCCGACGAGCTCGTCCGCCTCATCCGCAGCTTCGTCGTCGAG-CA-CA-TGGACTCGGAGTAG-CAAAGCA-CTAG-CTAGCTA-CATGATCA-AAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTCTACATAATTGATGAGTTGAGAGCGATTTGTATTTGTTAGGTGTGTTTTGATCTTATCTTAGTTATTATTGATATGTTTCTTGGTAATTTGAGAATGAATCAATAATGGAATGCCACATGGATGGCAATGCTTCTTGATCAAAAAAA]

[+] EMBL CB655493             [TCTCTTTTTTTTAATCTTCTAAACTTATTTGCCATTTTTCTCACGTCTCTGCTTTTGGACTAGAAGAGTAAAAGCTTCCCTATTCTAGAAGGCATCTCGTTCTCTTCCAAGTTCCCTATATAATGGGCTCCACGTCTCGCTCTCACACCGCACCGACGCATCAGCTACCTTCTACGCATTAACGCAAACATCTGCACGACACGACACAAGCAATGGCGCCGGCGGCGGAGCCGTA C GTGGTGGAGGACTGCCGCGGCGCGGTGCAGCTGATGAGCGACGGCACGGTGCGGCGCAGCGCCGAGCCGGCGTTCCACGTCGACCTGCCCGACGACGCCGACGCCGCCGTCGAGTGGAAGGACGTGACGTACGACGCCGAACACGACCTGAACGCGCGGCTGTACCGGCCGCGCCACCTCGGTGCCGCCAACGACGCGCGCGTCCCCGTCGTCGCCTACTTCCACGGCGGCGGCTTCTGCATCGGCTCCGGCCGGTGGCCCAACTTCCACGCCTGGTGCCTCCGCCTCGCCGCGGAGCTCCCCGCCGTCGTGCTGTCGTTCGACTACCGCCTCGCCCCGGAGCACCGCCTCCCCGCCGCGCAGGAGGACGGCGCCACGGCCATGGCGTGGGTGCGCGACAGCGCCGCGCGCGACCCGTGGCTCGCCGACGCCGCCGACTTCTCCCGGGTGTTCGTCGCCGGCGACTCGGCGGGCGGGAACATCACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK060082             [                                                                                                                                                                TCAGCTACCTTCTACGCATTAACGCAAACATCTGCACGACACGACACAAGCAATGGCGCCGGCGGCGGAGCCGTA C GTGGTGGAGGACTGCCGCGGCGCGGTGCAGCTGATGAGCGACGGCACGGTGCGGCGCAGCGCCGAGCCGGCGTTCCACGTCGACCTGCCCGACGACGCCGACGCCGCCGTCGAGTGGAAGGACGTGACGTACGACGCCGAACACGACCTGAACGCGCGGCTGTACCGGCCGCGCCACCTCGGTGCCGCCAACGACGCGCGCGTCCCCGTCGTCGCCTACTTCCACGGCGGCGGCTTCTGCATCGGCTCCGGCCGGTGGCCCAACTTCCACGCCTGGTGCCTCCGCCTCGCCGCGGAGCTCCCCGCCGTCGTGCTGTCGTTCGACTACCGCCTCGCCCCGGAGCACCGCCTCCCCGCCGCGCAGGAGGACGGCGCCACGGCCATGGCGTGGGTGCGCGACAGCGCCGCGCGCGACCCGTGGCTCGCCGACGCCGCCGACTTCTCCCGGGTGTTCGTCGCCGGCGACTCGGCGGGCGGGAACATCACCCACCACATGGCGGTGCGGTTCGGGAAGGCCGGGCTCGGCCCGCAGGTCCGGCTGCGCGGGCACGTTCTCCTCATGCCGGCCATGGCGGGGGAGACGCGGACGCGCGCCGAGCTGGAGTGCCGCCCCGGCGCGTTCCTCACCGCC GAGATGA GC GACAGGTACGCGCGCCTCATCCTGCCGGGCGGCGCGACGAGGGACTACCCGGTGCTGAACCCCGCCGGGCCGGAGGCGCCGGGGCTGGAGGCGGTGGCGATGGCGCCGTCGCTCGTCGTGGCGG CGGAGCACGACATCCTCAGGGACCGGAACGAGCACTACGCGCGGCGGATGAGGGAGGAGTGGGGGAAGGAGGTGGCGTTCGTCGAGTTCGCCGGCGAG CAGCACGGCTTCTTCGAGGTGGATCCGTGGTCGGAGCG CGCCGACGAGCTCGTCCGCCTCATCCGCAGCTTCGTCGTCGAG CA CA TGGACTCGGAGTAG CAAAGCA CTAG CTAGCTA CATGATCA AAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTCTACATAATTGATGAGTTGAGAGCGATTTGTATTTGTTAGGTGTGTTTTGATCTTATCTTAGTTATTATTGATATGTTTCTTGGTAATTTGAGAATGAATCAATAATGGAATGCCACATGGATGGCAATG                 ]
[+] EMBL C25992               [                                                                                                                                                           cnantnCANCNACCTTCTACGCATTAACGCAAACATCTGCACGACACGACACAAGCAATGGCGCCGGCGGGGNAGC  TANCGGTGGTGGAGGACTGCCGCGGCGCGTTGCAGCTGATGAGCGACGGCACGGTGCGGCGCA CGCCGAGCCGGCNTTCCACGTCGACCTGCCCGACGACGCCGACGCCGCCGTCNAGTGGAAGGACGTGACGTACGACGCCGAACACGACCTGAACGCGCGGCTGTACCGGCCGCGGCACCTCGGTGCCGCCAACAACGCGCGCTTCCCCGTCGTCGCCTACTTtnaag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB659711             [                                                                                                                                                                             ACGCATTAACGCAAACATCTGCACGACACGACACAAGCAATGGCGCCGGCGGCGGAGCCGTA C GTGGTGGAGGACTGCCGCGGCGCGGTGCAGCTGATGAGCGACGGCACGGTGCGGCGCAGCGCCGAGCCGGCGTTCCACGTCGACCTGCCCGACGACGCCGACGCCGCCGTCGAGTGGAAGGACGTGACGTACGACGCCGAACACGACCTGAACGCGCGGCTGTACCGGCCGCGCCACCTCGGTGCCGCCAACGACGCGCGCGTCCCCGTCGTCGCCTACTTCCACGGCGGCGGCTTCTGCATCGGCTCCGGCCGGTGGCCCAACTTCCACGCCTGGTGCCTCCGCCTCGCCGCGGAGCTCCCCGCCGTCGTGCTGTCGTTCGACTACCGCCTCGCCCCGGAGCACCGCCTCCCCGCCGCGCAGGAGGACGGCGCCACGGCCATGGCGTGGGTGCGCGACAGCGCCGCGCGCGACCCGTGGCTCGCCGACGCCGCCGACTTCTCCCGGGTGTTCGTCGCCGGCGACTCGGCGGGCGGGAACATCACCCACCACATGGCGGTGCGGTTCGGGAAGGCCGGGCTCGGCCCGCAGGTCCGGCTGCGCGGGCACGTTCTCCTCATGCCGGCCATGGCGGGGGAGACGCGGACGCGCGCCGAGCTGGAGTGCCGCCCCGGCGCGTTCCTCACCGCC GAGATGA GC GACAGGTACGCGCGCCTCATCCTGCCGGGCGGCGCGACGAAGGACTACCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB655492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTGTCGTTCGACTACCGCCTCGCCCCGGAGCACCGCCTCCCCGCCGCGCAGGAGGACGGCGCCACGGCCATGGCGTGGGTGCGCGACAGCGCCGCGCGCGACCCGTGGCTCGCCGACGCCGCCGACTTCTCCCGGGTGTTCGTCGCCGGCGACTCGGCGGGCGGGAACATCACCCACCACATGGCGGTGCGGTTCGGGAAGGCCGGGCTCGGCCCGCAGGTCCGGCTGCGCGGGCACGTTCTCCTCATGCCGGCCATGGCGGGGGAGACGCGGACGCGCGCCGAGCTGGAGTGCCGCCCCGGCGCGTTCCTCACCGCC GAGATGA GC GACAGGTACGCGCGCCTCATCCTGCCGGGCGGCGCGACGAGGGACTACCCGGTGCTGAACCCCGCCGGGCCGGAGGCGCCGGGGCTGGAGGCGGTGGCGATGGCGCCGTCGCTCGTCGTGGCGG CGGAGCACGACATCCTCAGGGACCGGAACGAGCACTACGCGCGGCGGATGAGGGAGGAGTGGGGGAAGGAGGTGGCGTTCGTCGAGTTCGCCGGCGAG CAGCACGGCTTCTTCGAGGTGGATCCGTGGTCGGAGCG CGCCGACGAGCTCGTCCGCCTCATCCGCAGCTTCGTCGTCGAG CA CG GGGACT                                                                                                                                                                                                                               ]
[-] EMBL CB659712             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCGCGACAGCGCCGCGCGCGACCCGTGGCTCGCCGACGCCGCCGACTTCTCCCGGGTGTTCGTCGCCGGCGACTCGGCGGGCGGGAACATCACCCACCACATGGCGGTGCGGTTCGGGAAGGCCGGGCTCGGCCCGCAGGTCCGGCTGCGCGGGCACGTTCTCCTCATGCCGGCCATGGCGGGGGAGACGCGGACGCGCGCCGAGCTGGAGTGCCGCCCCGGCGCGTTCCTCACCGCC GAGATGA GC GACAGGTACGCGCGCCTCATCCTGCCGGGCGGCGCGACGAGGGACTACCCGGTGCTGAACCCCGCCGGGCCGGAGGCGCCGGGGCTGGAGGCGGTGGCGATGGCGCCGTCGCTCGTCGTGGCGG CGGAGCACGACATCCTCAGGGACCGGAACGAGCACTACGCGCGGCGGATGAGGGAGGAGTGGGGGAAGGAGGTGGCGTTCGTCGAGTTCGCCGGCGAG CAGCACGGCTTCTTCGAGGTGGATCCGTGGTCGGAGCG CGCCGACGAGCTCGTCCGCCTCATCCGCAGCTTCGTCGTCGAG CA CA TGGACTCGGAGTAG CAAAGCA CTAG CTAGCTA CATGATCA AAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTCTACATAATTGATGAGTTGAGAGCGATTTGTATTTGTTAGGTGTGTTTTGATCTTATCTTAGTTATTATTGATATGTTTCTTGGTAATTTGAGAATGAATCAATAATGGAAGGCCACATGGATGGCAATGCTTCTTGATCAAAA   ]
[+] EMBL BI803246             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGGCGCGTTCCTCACCGCCGGAGATGATGCTGACAGGTACGCGCGCCTCATCCTGCCGGGCGGCGCGACGAGGGACTACCCGGTGCTGAACCCCGCCGGGCCGGAGGC CCGGGGCTGGA GCGGTGGCGATGGC CC TCGCTC TCGTGGCGG CGGAGCACGACATCCTCAGGGACCGGAACGAGCACTACGCGCGGCGGATGAGGGAGGAGTGGGGGAAGGAGGTGGCGTTCGTCGAGTTCGCCGGCGAG CAGCACGGCTTCTTCGAGGTGGATCCGTGGTCGGAGCG CGCCGACGAGCTCGTCCGCCTCATCCGCAGCTTCGTCGTCGAG CA CA TGGACTCGGAGTAG C AAGCA CTAG CTAGCTA CATGATCC AAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTCTACATAATTGATGAGTTGAGAGCGATTTGTATTTGTTAGGTGTGTTTTGATCTTATCTTAGTTATTATTGATATGTTTCTTGGTAATTTGAGAATGAATC ATAATGGAAT CCACATGGATGGC ATGCTTCTTGATCAAAAA  ]
[+] EMBL BI804204             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCGTTCCTCACCGCC GAGATGA GC GACAGGTACGCGCGCCTCATCCTGCCGGGCGGCGCGACGAGGGACTACCCGGTGCTGAACCCCGCCGGGCCGGAGGCGCCGGGGCTGGAGGCGGTGGCGATGGCGCCGTCGCTCGTCGTGGCGGCCGGAGCACGACATCCTCAGGGACCGGAACGAGCACTACGCGCGGCGGATGAGGGAGGAGTGGGGGAAGGAGGTGGCGTTCGTCGAGTTCGCCGGCGAG CAGCACGGCTTCTTCGAGGTGGATCCGTGGTCGGAGCG CGCCGACGAGCTCGTCCGCCTCATCCGCAGCTTCGTCGTCGAG CA CA TGGACTCGGAGTAG CCAAGCA CTAG CTAGCTA CATGATCC AAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTCTACATAATTGATGAGTTGAGAGCGATTTGTATTTGTTAGGTGTGTTTTGATCTTATCTTAGTTATTATTGATATGTTTCTTGGTAATTTGAGAATGAATC ATAATGGAATGCCACATGGATGGC ATGCTTCTTGATCCAAAAA ]
[+] EMBL BQ908329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGAGCACTACGCGCGGCGGATGAGGGAGGAGTGGGGGAAGGAGGTGGCGTTCGTCGAGTTCGCCGGCGAG CAGCACGGCTTCTTCGAGGTGGATCCGTGGTCGGAGCG CGCCGACGAGCTCGTCCGCCTCATCCGCAGCTTCGTCGTCGAGCCACCACTGGACTCGGAGTAGCCCAAGCACCTAGCCTAGCTACCATGATCACAAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTCTACATAATTGATGAGTTGAGAGCGATTTGTATTTGTTAGGTGTGTTTTGATCTTATCTTAGTTATTATTGATATGTTTCTTGGTAATTTGAGAATGAATCAATAATGGAATGCCACATGGATGGC ATGCTTCTTGATCAAAAAAA]
[+] EMBL BQ908656             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGCCGGCGAGCCAGCACGGCTTCTTCGAGGTGGATCCGTGGTCGGAGCGCCGCCGACGAGCTCGTCCGCCTCATCCGCAGCTTCGTCGTCGAG CA CA TGGACTCGGAGTAG CAAAGCA CTAG CTAGCTA CATGATCA AAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTCTACATAATTGATGAGTTGAGAGCGATTTGTATTTGTTAGGTGTGTTTTGATCTTATCTTAGTTATTATTGATATGTTTCTTGGTAATTTGAGAATGAATCAATAATGGAATGCCACATGGATGGCAATGCTTCTTGATCAAAAAA ]
[+] EMBL CA766776             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAACA CTAG CTAGCTA CATGATCA AAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTCTACATAATTGATGAGTTGAGAGCGATTTGTATTTGTTAGGTGTGTTTTGATCTTATCTTAGTTATTATTGATATGTTTCTTGGTAATTTGAGAATGAATCAATAATGGAATGCCACATGGATGGCAATGCT               ]


>consensus_13079#0 TCTCTTTTTTTTAATCTTCTAAACTTATTTGCCATTTTTCTCACGTCTCTGCTTTTGGAC TAGAAGAGTAAAAGCTTCCCTATTCTAGAAGGCATCTCGTTCTCTTCCAAGTTCCCTATA TAATGGGCTCCACGTCTCGCTCTCACACCGCACCGACGCATCAGCTACCTTCTACGCATT AACGCAAACATCTGCACGACACGACACAAGCAATGGCGCCGGCGGCGGAGCCGTACGTGG TGGAGGACTGCCGCGGCGCGGTGCAGCTGATGAGCGACGGCACGGTGCGGCGCAGCGCCG AGCCGGCGTTCCACGTCGACCTGCCCGACGACGCCGACGCCGCCGTCGAGTGGAAGGACG TGACGTACGACGCCGAACACGACCTGAACGCGCGGCTGTACCGGCCGCGCCACCTCGGTG CCGCCAACGACGCGCGCGTCCCCGTCGTCGCCTACTTCCACGGCGGCGGCTTCTGCATCG GCTCCGGCCGGTGGCCCAACTTCCACGCCTGGTGCCTCCGCCTCGCCGCGGAGCTCCCCG CCGTCGTGCTGTCGTTCGACTACCGCCTCGCCCCGGAGCACCGCCTCCCCGCCGCGCAGG AGGACGGCGCCACGGCCATGGCGTGGGTGCGCGACAGCGCCGCGCGCGACCCGTGGCTCG CCGACGCCGCCGACTTCTCCCGGGTGTTCGTCGCCGGCGACTCGGCGGGCGGGAACATCA CCCACCACATGGCGGTGCGGTTCGGGAAGGCCGGGCTCGGCCCGCAGGTCCGGCTGCGCG GGCACGTTCTCCTCATGCCGGCCATGGCGGGGGAGACGCGGACGCGCGCCGAGCTGGAGT GCCGCCCCGGCGCGTTCCTCACCGCCGAGATGAGCGACAGGTACGCGCGCCTCATCCTGC CGGGCGGCGCGACGAGGGACTACCCGGTGCTGAACCCCGCCGGGCCGGAGGCGCCGGGGC TGGAGGCGGTGGCGATGGCGCCGTCGCTCGTCGTGGCGGCGGAGCACGACATCCTCAGGG ACCGGAACGAGCACTACGCGCGGCGGATGAGGGAGGAGTGGGGGAAGGAGGTGGCGTTCG TCGAGTTCGCCGGCGAGCAGCACGGCTTCTTCGAGGTGGATCCGTGGTCGGAGCGCGCCG ACGAGCTCGTCCGCCTCATCCGCAGCTTCGTCGTCGAGCACATGGACTCGGAGTAGCAAA GCACTAGCTAGCTACATGATCAAAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTC TACATAATTGATGAGTTGAGAGCGATTTGTATTTGTTAGGTGTGTTTTGATCTTATCTTA GTTATTATTGATATGTTTCTTGGTAATTTGAGAATGAATCAATAATGGAATGCCACATGG ATGGCAATGCTTCTTGATCAAAAAAA



consensusID : consensus_13079#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 435
fasta sequence
                              [TGCCCAAGGGGACCCGGGTAACCGAAGCCACTTAACCGCCGCCGAGCCAGAATTGAAGGGGAAGGAAATTGGGGGAAAGGGAAGGTGGCCGTTTCGTTCGGAAGTTTTCACCCGGTCGACAAGCCACCAGGGCTTTCCTTTCCGAGTTGGGAATCCGTGGTCGGAGCCGCAGCCAGACGAGCTCAGTCCAGCACTCATCCGCAGCTTCGTCGTCGAGCACATGGACTCGGAGTAGCAAAGCACTAGCATAGCTACATGATCAAAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTCTACATAATTGGATGAGTTGAGAGCGATGTTGGTATTTGTTAGGTGTGTTTTGATCTTATCTTAGTTATTATTGAGTATGTTTCTTGGTAATTTGAGAATGAATCAATAATGGGAATGGCCACATGGATGCAATGC]

[+] EMBL BI799206             [TGCCCAAGGGGACCCGGGTAACCGAAGCCACTTAACCGCCGCCGAGCCAGAATTGAAGGGGAAGGAAATTGGGGGAAAGGGAAGGTGGCCGTTTCGTTCGGAAGTTTTCACCCGGTCGACAAGCCACCAGGGCTTTCCTTTCCGAGTTGGGAATCCGTGGTCGGAGCCGCAGCCAGACGAGCTCAGTCCAGCACTCATCCGCAGCTTCGTCGTCGAGCACATGGACTCGGAGTAGCAAAGCACTAGCATAGCTACATGATCAAAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTCTACATAATTGGATGAGTTGAGAGCGATGTTGGTATTTGTTAGGTGTGTTTTGATCTTATCTTAGTTATTATTGAGTATGTTTCTTGGTAATTTGAGAATGAATCAATAATGGGAATGGCCACATGGATGCAATGC]


>consensus_13079#1 TGCCCAAGGGGACCCGGGTAACCGAAGCCACTTAACCGCCGCCGAGCCAGAATTGAAGGG GAAGGAAATTGGGGGAAAGGGAAGGTGGCCGTTTCGTTCGGAAGTTTTCACCCGGTCGAC AAGCCACCAGGGCTTTCCTTTCCGAGTTGGGAATCCGTGGTCGGAGCCGCAGCCAGACGA GCTCAGTCCAGCACTCATCCGCAGCTTCGTCGTCGAGCACATGGACTCGGAGTAGCAAAG CACTAGCATAGCTACATGATCAAAGATTAGTCAATTATTAAAAGTGATTTAGACTTTTTC TACATAATTGGATGAGTTGAGAGCGATGTTGGTATTTGTTAGGTGTGTTTTGATCTTATC TTAGTTATTATTGAGTATGTTTCTTGGTAATTTGAGAATGAATCAATAATGGGAATGGCC ACATGGATGCAATGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13079#0      TCTCTTTTTTTTAATCTTCTAAACTTATTTGCCATTTTTCTCACGTCTCTGCTTTTGGAC 60
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      TAGAAGAGTAAAAGCTTCCCTATTCTAGAAGGCATCTCGTTCTCTTCCAAGTTCCCTATA 120
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      TAATGGGCTCCACGTCTCGCTCTCACACCGCACCGACGCATCAGCTACCTTCTACGCATT 180
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      AACGCAAACATCTGCACGACACGACACAAGCAATGGCGCCGGCGGCGGAGCCGTACGTGG 240
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      TGGAGGACTGCCGCGGCGCGGTGCAGCTGATGAGCGACGGCACGGTGCGGCGCAGCGCCG 300
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      AGCCGGCGTTCCACGTCGACCTGCCCGACGACGCCGACGCCGCCGTCGAGTGGAAGGACG 360
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      TGACGTACGACGCCGAACACGACCTGAACGCGCGGCTGTACCGGCCGCGCCACCTCGGTG 420
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      CCGCCAACGACGCGCGCGTCCCCGTCGTCGCCTACTTCCACGGCGGCGGCTTCTGCATCG 480
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      GCTCCGGCCGGTGGCCCAACTTCCACGCCTGGTGCCTCCGCCTCGCCGCGGAGCTCCCCG 540
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      CCGTCGTGCTGTCGTTCGACTACCGCCTCGCCCCGGAGCACCGCCTCCCCGCCGCGCAGG 600
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      AGGACGGCGCCACGGCCATGGCGTGGGTGCGCGACAGCGCCGCGCGCGACCCGTGGCTCG 660
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      CCGACGCCGCCGACTTCTCCCGGGTGTTCGTCGCCGGCGACTCGGCGGGCGGGAACATCA 720
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      CCCACCACATGGCGGTGCGGTTCGGGAAGGCCGGGCTCGGCCCGCAGGTCCGGCTGCGCG 780
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      GGCACGTTCTCCTCATGCCGGCCATGGCGGGGGAGACGCGGACGCGCGCCGAGCTGGAGT 840
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      GCCGCCCCGGCGCGTTCCTCACCGCCGAGATGAGCGACAGGTACGCGCGCCTCATCCTGC 900
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      CGGGCGGCGCGACGAGGGACTACCCGGTGCTGAACCCCGCCGGGCCGGAGGCGCCGGGGC 960
consensus_13079#1      ------------------------------------------------------------
                                                                                   

consensus_13079#0      TGGAGGCGGTGGCGATGGCGCCGTCGCTCGTCGTGGCGGCGGAGCACGACATCCTCAGGG 1020
consensus_13079#1      ---------TGCCCAAGGGGACCCGGGTAACCGAAGCCACTTAAC-CGCCGCCGAGCCAG 50
                                ** * * ** * *   * *   **  **  *  * * ** *  *      *

consensus_13079#0      ACCGGAACGAGCACTACGCGCGGCGGATGAGGGAGGAGTGGGGGAAGGAGGTGGCGTTCG 1080
consensus_13079#1      AATTGAAGGGGAAGGAAATTGGGGGAAAGGGAAGGTGGCCGTTTCGTTCGGAAGTTTTCA 110
                       *   *** * * *  *     ** * * * *   *  *  *        **  *  *** 

consensus_13079#0      TCGAGTTCGCCGGCGAGCAGCACGG-CTTCTTCGAGGTGG--ATCCGTGGTCGGAGC-GC 1136
consensus_13079#1      CCCGGTCGACAAGCCACCAGGGCTTTCCTTTCCGAGTTGGGAATCCGTGGTCGGAGCCGC 170
                        *  **   *  ** * ***  *   * * * **** ***  *************** **

consensus_13079#0      GCC--GACGAGCTC-GTCCGCC--TCATCCGCAGCTTCGTCGTCGAGCACATGGACTCGG 1191
consensus_13079#1      AGCCAGACGAGCTCAGTCCAGCACTCATCCGCAGCTTCGTCGTCGAGCACATGGACTCGG 230
                         *  ********* ****  *  ************************************

consensus_13079#0      AGTAGCAAAGCACTAGC-TAGCTACATGATCAAAGATTAGTCAATTATTAAAAGTGATTT 1250
consensus_13079#1      AGTAGCAAAGCACTAGCATAGCTACATGATCAAAGATTAGTCAATTATTAAAAGTGATTT 290
                       ***************** ******************************************

consensus_13079#0      AGACTTTTTCTACATAATTG-ATGAGTTGAGAGCGATTT--GTATTTGTTAGGTGTGTTT 1307
consensus_13079#1      AGACTTTTTCTACATAATTGGATGAGTTGAGAGCGATGTTGGTATTTGTTAGGTGTGTTT 350
                       ******************** **************** *  *******************

consensus_13079#0      TGATCTTATCTTAGTTATTATTGA-TATGTTTCTTGGTAATTTGAGAATGAATCAATAAT 1366
consensus_13079#1      TGATCTTATCTTAGTTATTATTGAGTATGTTTCTTGGTAATTTGAGAATGAATCAATAAT 410
                       ************************ ***********************************

consensus_13079#0      GGAAT--GCCACATGGATGGCAATGCTTCTTGATCAAAAAAA 1406
consensus_13079#1      GGGAATGGCCACATGGATG-CAATGC---------------- 435
                       ** *   ************ ******                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)