These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13091#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 3013 fasta sequence [TCACGCTTCACTCTCCTTCCTCCCACCATCCCGATCTCCGGCGATGTCGCTCCACCAGCGGCCGCACCAGAAGCCGCCGGCGACCGACTCCCTCCCCGCCTCCGCCGCCGCCGCCGCCGCCGCGCCTTCTCGCCCGCTCCCACTCCTCACCCTCCCTTACCTCTTCTCCCTCCTCGCGCTCCTCCTCCTCCTCGCCCTCCTCTTCCCCTGGGGCCCTCCCAGCCACTCCTCTGCCCCCGCCTCGCCGTGGCGGGGGTACACGCTCCAGGAGGCCGCCGCCTTCGCCGCTCGCGCGGGAAACGGCACCATCGTCCTCGCCGCCGTCTCCGGGCCCTACCTCCCCTTCCTCTCCAACTGGCTCATCACCGTCCGCCGCGCCGGCCGCGCCGACCAGGTGCTCGTCGTCGCCGAGGACTATGACACGCTCGAGCGGATCAATGCGGCGTGGCCGGGACACGCCGTCCTCGTGCCCCCCGCGCCCGACGCCCAGGTCGCCCACAAGTTCGGATCCCAGGGGTTCTTTAACTTCACCTCGCGGCGGCCGCGGCACTTGCTGCAGATTCTTGAGCTAGGGTACAGTGTCATGTACAACGATGTCGACATGGTGTGGCTCGCCGACCCATTCCCGTATATCGTCGGGGATCATGACGTGTACTTCATGGATGATATGACTCCTGTGAAGCCATTGGATCATTCACATGAGCTGCCACCACCTGGTAAGAAGGGGCGGACTTACATCTGCAGCTGCATGATATTCCTGCGGCCAACGGAAGGGGCTAAGCTGCTATTGAGGAAGTGGATTGAGGAGCTCAAGGAGCAGCCCTGGTCAAAGAAGCAGAAAGCAAATGATCAGCCAGCATTCAACTGGGCTTTGAACAAGACTGCAGGACAGGTAGATGTGTATCTGCTGCCTCAGTCTGCATTTCCAACTGGAGGTTTATATTTTAAGAATAAAACATGGGTAAAGGAAACAAAGGGCAAGCATGTCATCATACACAATAACTATATCACAGGATTTGAGAAGAAGATAAAACGGTTTCGTGATCATGGGCTATGGCTTGTCGATGAACATAGTGATGAGTCACCACTTGGTAGAATATGAGCAAGCTGGCAAAGCTACACCACATCTGTCCTTGCAACAGCATCAAACTTTTGCAGCTGGTGTTTAACTGGTTGGGATTGCGGAACCGTGGGATTGATTTGCCATCCGCCACACAAAAATACAGCAACTGGATATGTGCAGTAGTTTTTAATTGTACATCAAGCCCCTTTCAGAGCGACCTGTTGTCATGATGATTATTTTTATTTCATTATCTTTTACGAATACGGCAGCAGTAAGATCTTAGGGTGAGAATGTAGCTATTTAAGGGAATGTGGCCACAAATATTAGCGAGTCAAGTAGTAACTCATTGGTCTATATGTATAGCATGGTAATTTTGTTAACCTGTAGGCATTTTTTTTGACACTGGATTGTGTTTAATATTATTCTTTTTACCTCCTTTCATAAAGAACTCTAACTGTCATGTGTGATGGCCTGCTGGGTGTCCACAAAACTGTGCTAATGATGA-CTTGTAAGTTGTAATTCCGTATAT-AATTATTTAA-CATGCTCAGGTAATCCCTTGCTTTTCTTTACCATCGCAATGCAACACATGAGATGAGTAGACCTTTCTTAGTATGCATTAAATATGGCATGCCTCTCTGAAACATACAGGACACACAGGACTATGATGAAGTGGCACAAGATAAGATGGCTACATATAAGAGGGATCAGGATTCACGGCTGTATCATGTGAATTTTGGAGCATAAAGCTTCAGTTCGAGGCTTTGGGCCTTGTGACCTTCTCGTCTCTCCATGTCTATTATTTTTCTTCACACAAACCTGCGGAGCTTGATGCGTCAGGATCGAATCGCCTGTTTTGGCTCATTCCATTCCAGCCAAAACGCTTGCGATTGGAGTAAGAATCCAAGAACCAGTGTGGCTGCTGCCATTGGACCCTTTCCTTCTCTGGTGCCTCCCAACTTTGCTTCCAGCAGCGGTAATGCCGTTGCCTTTGCCACACACAACGAACACCGGCGCGCACACATGTATATATGCTTCTGCCCATGCTCGGATCTGCACAGAAAACACCATATTTCTTCCTTGTGATCACGAGCTAACCTTGCATCTCTCATTGTCTTTGGCAAGGATCGATGGGCCAGGCTGCTGCCAAGGCGAAGCAAGGTGGCGATCAGGCAGAGAACAAGACTGGCAAGGACGAGAAGGTTGCGAAACCTAAGGATGCCAAGGATCTCACCGACTTCATGGAAAAAAACTACGACTCGA-TCAAGGACGTGACAAGCTTCGAAGATTTCTACCATGCCTTCTACGAGCTCATCGAAAAATTCTGTGAGGAACGTGGGCAATTGCAGTACAGGATACCGGAAAAAGCGGAACTTCAGAAGCAGTACGAGAGGGTGAACAAGAGCCCCCAGAAGGGGCAGAACCTGAGCAGGAAGCAGTTCATGGAGCTGGCCGGGCAGGTGATCAAGGTGAACAGCTTCACCTTCGGCAAGGCCACCATGGACGTGCTGGTCGTCCTCTTCGGCGCCCCCGTCTGCGCCCTCCTCGCCAAGAGGGTCGTCCCGGGCCTCAAGTCCTTCTCCGACGACGTCGTCATCCCCGTCGCCACCTCCGGCGCCGTCGTCTACCTCGCCAAGACCAACAAGCTGTGATCGAGGTGAATCGATCGTTCCAGAATCATATCCAGACTATGGCTAACAAATTATCGCGAGAATAAAGGTGAGGGAGAAAAAACGTACGTGGTGTCATGTCGTATAAAGTTTGCGTTGTGGCCTTGGTTAAATTTCGCCCAAATTGTAAAGATTATTTGAGAGTGGATTTTTATATTCACTCTCTTTTATATGTCTTCACTGTTCACACCTGTGAAATCTAGGAGAAATCTGTATAATAATATTCGTAAAATCTGATATGTGCACATGCACGAATCCTAGTTCGTCCCCAAAAAAAAAAAAA] [+] EMBL AK073634 [TCACGCTTCACTCTCCTTCCTCCCACCATCCCGATCTCCGGCGATGTCGCTCCACCAGCGGCCGCACCAGAAGCCGCCGGCGACCGACTCCCTCCCCGCCTCCGCCGCCGCCGCCGCCGCCGCGCCTTCTCGCCCGCTCCCACTCCTCACCCTCCCTTACCTCTTCTCCCTCCTCGCGCTCCTCCTCCTCCTCGCCCTCCTCTTCCCCTGGGGCCCTCCCAGCCACTCCTCTGCCCCCGCCTCGCCGTGGCGGGGGTACACGCTCCAGGAGGCCGCCGCCTTCGCCGCTCGCGCGGGAAACGGCACCATCGTCCTCGCCGCCGTCTCCGGGCCCTACCTCCCCTTCCTCTCCAACTGGCTCATCACCGTCCGCCGCGCCGGCCGCGCCGACCAGGTGCTCGTCGTCGCCGAGGACTATGACACGCTCGAGCGGATCAATGCGGCGTGGCCGGGACACGCCGTCCTCGTGCCCCCCGCGCCCGACGCCCAGGTCGCCCACAAGTTCGGATCCCAGGGGTTCTTTAACTTCACCTCGCGGCGGCCGCGGCACTTGCTGCAGATTCTTGAGCTAGGGTACAGTGTCATGTACAACGATGTCGACATGGTGTGGCTCGCCGACCCATTCCCGTATATCGTCGGGGATCATGACGTGTACTTCATGGATGATATGACTCCTGTGAAGCCATTGGATCATTCACATGAGCTGCCACCACCTGGTAAGAAGGGGCGGACTTACATCTGCAGCTGCATGATATTCCTGCGGCCAACGGAAGGGGCTAAGCTGCTATTGAGGAAGTGGATTGAGGAGCTCAAGGAGCAGCCCTGGTCAAAGAAGCAGAAAGCAAATGATCAGCCAGCATTCAACTGGGCTTTGAACAAGACTGCAGGACAGGTAGATGTGTATCTGCTGCCTCAGTCTGCATTTCCAACTGGAGGTTTATATTTTAAGAATAAAACATGGGTAAAGGAAACAAAGGGCAAGCATGTCATCATACACAATAACTATATCACAGGATTTGAGAAGAAGATAAAACGGTTTCGTGATCATGGGCTATGGCTTGTCGATGAACATAGTGATGAGTCACCACTTGGTAGAATATGAGCAAGCTGGCAAAGCTACACCACATCTGTCCTTGCAACAGCATCAAACTTTTGCAGCTGGTGTTTAACTGGTTGGGATTGCGGAACCGTGGGATTGATTTGCCATCCGCCACACAAAAATACAGCAACTGGATATGTGCAGTAGTTTTTAATTGTACATCAAGCCCCTTTCAGAGCGACCTGTTGTCATGATGATTATTTTTATTTCATTATCTTTTACGAATACGGCAGCAGTAAGATCTTAGGGTGAGAATGTAGCTATTTAAGGGAATGTGGCCACAAATATTAGCGAGTCAAGTAGTAACTCATTGGTCTATATGTATAGCATGGTAATTTTGTTAACCTGTAGGCATTTTTTTTGACACTGGATTGTGTTTAATATTATTCTTTTTACCTCCTTTCATAAAGAACTCTAACTGTCATGTGTGATGGCCTGCTGGGTGTCCACAAAACTGTGCTAATGATGA CTTGTAAGTTGTAATTCCGTATAT AATTATTTAA CATGCTCAGGTAATCCCTTGCTTTTCTTTACCATCGCAATGCAACACATGAGATGAGTAGACCTTTCTTAGTATGCATTAAATATGGCATGCCTCTCTGAAACATACAGGACACACAGGACTATGATGAAGTGGCACAAGATAAGATGGCTACATATAAGAGGGATCAGGATTCACGGCTGTATCATGTGAATTTTGGAGCATAAAGCTTCAGTTCGAGGCTTTGGGCCTTGTGACCTTCTCGTCTCTCCATGTCTATTATTTTTCTTCACACAAACCTGCGGAGCTTGATGCGTCAGGATCGAATCGCCTGTTTTGGCTCATTCCATTCCAGCCAAAACGCTTGCGATTGGAGTAAGAATCCAAGAACCAGTGTGGCTGCTGCCATTGGACCCTTTCCTTCTCTGGTGCCTCCCAACTTTGCTTCCAGCAGCGGTAATGCCGTTGCCTTTGCCACACACAACGAACACCGGCGCGCACACATGTATATATGCTTCTGCCCATGCTCGGATCTGCACAGAAAACACCATATTTCTTCCTTGTGATCACGAGCTAACCTTGCATCTCTCATTGTCTTTGGCAAGGATCGATGGGCCAGGCTGCTGCCAAGGCGAAGCAAGGTGGCGATCAGGCAGAGAACAAGACTGGCAAGGACGAGAAGGTTGCGAAACCTAAGGATGCCAAGGATCTCACCGACTTCATGG AAAAAACTACGACTCGA TCAAGGACGTGACAAGCTTCGAAGATTTCTACCATGCCTTCTACGAGCTCATCGAAAAATTCTGTGAGGAACGTGGGCAATTGCAGTACAGGATACCGGAAAAAGCGGAACTTCAGAAGCAGTACGAGAGGGTGAACAAGAGCCCCCAGAAGGGGCAGAACCTGAGCAGGAAGCAGTTCATGGAGCTGGCCGGGCAGGTGATCAAGGTGAACAGCTTCACCTTCGGCAAGGCCACCATGGACGTGCTGGTCGTCCTCTTCGGCGCCCCCGTCTGCGCCCTCCTCGCCAAGAGGGTCGTCCCGGGCCTCAAGTCCTTCTCCGACGACGTCGTCATCCCCGTCGCCACCTCCGGCGCCGTCGTCTACCTCGCCAAGACCAACAAGCTGTGATCGAGGTGAATCGATCGTTCCAGAATCATATCCAGACTATGGCTAACAAATTATCGCGAGAATAAAGGTGAGGGAGAAAAAACGTACGTGGTGTCATGTCGTATAAAGTTTGCGTTGTGGCCTTGGTTAAATTTCGCCCAAATTGTAAAGATTATTTGAGAGTGGATTTTTATATTCACTCTCTTTTATATGTCTTCACTGTTCACACCTGTGAAATCTAGGAGAAATCTGTATAATAATATTCGTAAAATCTGATATGTGCACATGCACGAATCCTA ] [+] EMBL AK071425 [ TCCTCCCACCATCCCGATCTCCGGCGATGTCGCTCCACCAGCGGCCGCACCAGAAGCCGCCGGCGACCGACTCCCTCCCCGCCTCCGCCGCCGCCGCCGCCGCCGCGCCTTCTCGCCCGCTCCCACTCCTCACCCTCCCTTACCTCTTCTCCCTCCTCGCGCTCCTCCTCCTCCTCGCCCTCCTCTTCCCCTGGGGCCCTCCCAGCCACTCCTCTGCCCCCGCCTCGCCGTGGCGGGGGTACACGCTCCAGGAGGCCGCCGCCTTCGCCGCTCGCGCGGGAAACGGCACCATCGTCCTCGCCGCCGTCTCCGGGCCCTACCTCCCCTTCCTCTCCAACTGGCTCATCACCGTCCGCCGCGCCGGCCGCGCCGACCAGGTGCTCGTCGTCGCCGAGGACTATGACACGCTCGAGCGGATCAATGCGGCGTGGCCGGGACACGCCGTCCTCGTGCCCCCCGCGCCCGACGCCCAGGTCGCCCACAAGTTCGGATCCCAGGGGTTCTTTAACTTCACCTCGCGGCGGCCGCGGCACTTGCTGCAGATTCTTGAGCTAGGGTACAGTGTCATGTACAACGATGTCGACATGGTGTGGCTCGCCGACCCATTCCCGTATATCGTCGGGGATCATGACGTGTACTTCATGGATGATATGACTCCTGTGAAGCCATTGGATCATTCACATGAGCTGCCACCACCTGGTAAGAAGGGGCGGACTTACATCTGCAGCTGCATGATATTCCTGCGGCCAACGGAAGGGGCTAAGCTGCTATTGAGGAAGTGGATTGAGGAGCTCAAGGAGCAGCCCTGGTCAAAGAAGCAGAAAGCAAATGATCAGCCAGCATTCAACTGGGCTTTGAACAAGACTGCAGGACAGGTAGATGTGTATCTGCTGCCTCAGTCTGCATTTCCAACTGGAGGTTTATATTTTAAGAATAAAACATGGGTAAAGGAAACAAAGGGCAAGCATGTCATCATACACAATAACTATATCACAGGATTTGAGAAGAAGATAAAACGGTTTCGTGATCATGGGCTATGGCTTGTCGATGAACATAGTGATGAGTCACCACTTGGTAGAATATGAGCAAGCTGGCAAAGCTACACCACATCTGTCCTTGCAACAGCATCAAACTTTTGCAGCTGGTGTTTAACTGGTTGGGATTGCGGAACCGTGGGATTGATTTGCCATCCGCCACACAAAAATACAGCAACTGGATATGTGCAGTAGTTTTTAATTGTACATCAAGCCCCTTTCAGAGCGACCTGTTGTCATGATGATTATTTTTATTTCATTATCTTTTACGAATACGGCAGCAGTAAGATCTTAGGGTGAGAATGTAGCTATTTAAGGGAATGTGGCCACAAATATTAGCGAGTCAAGTAGTAACTCATTGGTCTATATGTATAGCATGGTAATTTTGTTAACCTGTAGGCATTTTTTTTGACACTGGATTGTGTTTAATATTATTCTTTTTACCTCCTTTCATAAAGAACTCTAACTGTCATGTGTGATGGCCTGCTGGGTGTCCACAAAACTGTGCTAATGATGA CTTGTAAGTTGTAATTCCGTATAT AATTATTTAA C ] [+] EMBL CA763987 [ GGTTTATATTTTAAGAATAAAACATGGGTAAAGGAAACAAAGGGCAAGCATGTCATCATACACAATAACTATATCACAGGATTTGAGAAGAAGATAAAACGGTTTCGTGATCATGGGCTATGGCTTGTCGATGAACATAGTGATGAGTCACCACTTGGTAGAATATGAGCAAGCTGGCAAAGCTACACCACATCTGTCCTTGCAACAGCATCAAACTTTTGCAGCTGGTGTTTAACTGGTTGGGATTGCGGAACCGTGGGATTGATTTGCCATCCGCCACACAAAAATACAGCAACTGGATATGTGCAGTAGTTTTTAATTGTACATCAAGCCCCTTTCAGAGCGACCTGTTGTCATGATGATTATTTTTATTTCATTATCGTTTACGAATACGGCAGCAGTAAGATCTTAGGGTGAGAATGTAGCTATTTAAGGGAATGTGGCCACAAATATTAGCGAGTCAAGTAGTAACTCATTGGTCTATATGTATAGCATGGTAATTTTGTTAACCTGTAGGCA TTTTTTTGACACTGGATTGTGTTTAATATTATTCTTTTTACCTCCTTTCATAAAGAACTCTAACTGTCATGTGCGATGGCCTGCTGGGTGTCCACAAAACTGTGCTAATGATGA CTTGTAAGTTGTAATTCCGTATAT AATTATTTAA CATGCTCAGGTAATCCCTTG ] [+] EMBL AU066285 [ GATTGATTTGCCATCCGCCACACAAAAATACAGCAACTGGATATGTGCAGTAGTTTTTAATTGTACATCAAGCCCCTTTCAGAGCGACCTGTTGTCATGATGATTATTTTTATTTCATTATCTTTTACGAATACGGCAGCAGTAAGATCTTAGGGTGAGAATGTAGCTATTTAAGGGAATGTGGCCACAAATATTAGCGAGTCAAGTAGTAACTCATTGGTCTATATGTATAGCATGGTAATTTTGTTAACCTGTAGGCATTTTTTTTGACACTGGATTGTGTTTAATATTATTCTTTTTACCTCCTTTCATAAAGACCTCTAACTGTCATGTGTGATGGCCTGCTGGGTGTCCACAAAACTGTGCTAATGATGACCTTGTAAGTTGTAATTCCGNATATAAATTATTTAACCATGCTCAGGTAA ] [+] EMBL AK059319 [ CATATTTCTTCCTTGTGATCACGAGCTAACCTTGCATCTCTCATTGTCTTTGGCAAGGATCGATGGGCCAGGCTGCTGCCAAGGCGAAGCAAGGTGGCGATCAGGCAGAGAACAAGACTGGCAAGGACGAGAAGGTTGCGAAACCTAAGGATGCCAAGGATCTCACCGACTTCATGGAAAAAAACTACGACTCGA TCAAGGACGTGACAAGCTTCGAAGATTTCTACCATGCCTTCTACGAGCTCATCGAAAAATTCTGTGAGGAACGTGGGCAATTGCAGTACAGGATACCGGAAAAAGCGGAACTTCAGAAGCAGTACGAGAGGGTGAACAAGAGCCCCCAGAAGGGGCAGAACCTGAGCAGGAAGCAGTTCATGGAGCTGGCCGGGCAGGTGATCAAGGTGAACAGCTTCACCTTCGGCAAGGCCACCATGGACGTGCTGGTCGTCCTCTTCGGCGCCCCCGTCTGCGCCCTCCTCGCCAAGAGGGTCGTCCCGGGCCTCAAGTCCTTCTCCGACGACGTCGTCATCCCCGTCGCCACCTCCGGCGCCGTCGTCTACCTCGCCAAGACCAACAAGCTGTGATCGAGGTGAATCGATCGTTCCAGAATCATATCCAGACTATGGCTAACAAATTATCGCGAGAATAAAGGTGAGGGAGAAAAAACGTACGTGGTGTCATGTCGTATAAAGTTTGCGTTGTGGCCTTGGTTAAATTTCGCCCAAATTGTAAAGATTATTTGAGAGTGGATTTTTATATTCACTCTCTTTTATATGTCTTCACTGTTCACACCTGTGAAATCTAGGAGAAATCTGTATAA ] [+] EMBL AU065913 [ CTTGTGATCACGAGCTAACCTTGCATCTCTCATTGTCTTTGGCAAGGNTCGATGGGCCAGGCTGCTGCCAAGGCGAAG AAGGTGGCGATCAGGCAGAGAACAAGACTGGCAAGGACGAGAAGGTTGCGAAACCTAAGGATGCCAAGGNTCTCACCGACTTCATGGAAAAAAACTACGACTCGA TCAAGGACGTGACAAGCTTCGAAGATTTCTACCATGCCTTCTACGAGCTCATCGAAAAATTCTGTGAGGAACGTGGGCAATTGCAGTACAGGATACCGGAAAAAGCGGAACTTCAGAAGCAGTACGAGAGGGTGAACAAGAGCCCCCAGNAGGGGCAGAACCTGAGCAGGAAGCAGTTCATGGAGCTGGC ] [+] EMBL AU065952 [ CTTGTGATCACGAGCTAACCTTGCATCTCTCATTGTCTTTGGCAAGGATCGATGGGCCAGGCTGCTG CAAGGCGAA NAAGGTGGCGATCAGGCAGAGAACAAGACTGGCAAGGACGAGAAGGTTGCGAAACCTAAGGATGCCAAGGATCTCACCGACTTCATGG AAAAAACTACGACTCGA TCAAGGACGTGACAAGCTTCGAAGATTTCTACCATGCCTTCTACGA CTCATCG AAAATTCTGTGAGGAACGTGGG AATTGCAGTACAGGAT NCGG AAAAGCGG ACTTCAG AG AGT CG NAGGGTG ACAAG G CCCCAGA GGGCAG ACCTGA CAGGA ] [+] EMBL CB683603 [ TTGTCATCACGAGCTAACCTTGCATCTCTCATTGTCTTTGGCAAGGATCGATGGGCCAGGCTGCTGCCAAGGCGAAGCAAGGTGGCGATCAGGCAGACAACAAGACTGGCAAGGACGAGAAGGTTGCGAAACCTAAGGATGCCAAGGATCTCACCGACTTCATGGAAAAAAACTACGACTCGA TCAAGGACGTGACAAGCTTCCAAGATTTCTACCATGCCTTCTACGAGCTCATCGAAAAATTCTGTGAGGAACGTGGGCAATTGCAGTACAGGATACCGGAAAAAGCGGAACTTCAGAACCAATACGAGAGGGTGAACAACAGCCCCCAGAAGGGGCAGAACCTGAGCAGGAAGCACTTCATGGAGCTGGCCGGGCAGGTGATCAAGGTGAACAGCTTCACCTTCGGCAAGGCCACCATGGACGTGCTGGTCGTCCTCTTCGGCGCCCCCGTCTGCGCCCTCCTCGCCAAGAGGGTCGTCCCGGGCCTCAAGTCCTTCTCCGACGACGTCGTCATCCCCGTCGCCACCTCCGGCGCCGTCGTCTACCTCGCCAAGACCAACAAGCTGTGATCGAGGTGAATCGATCGTTCCAGAATCATATCCAGACTATGGCTAACAAATTATCGCGAGAATAAAGGTGAGGGAGAAAAAACGTACGTGGTGTCATGTCGTATAAAGTTTGCGTTGTGGCCTTGGTTAAATTTCGCCCAAATTGTAAAGATTATTTGAGAGTGGATTTTTATATTCACTC ] [+] EMBL C74974 [ ACCTTGCATCTCTCATTGTCTTTGGCAANGATCGATGGGCCAGGCTGCTGCCAAGGCGAA CAAGGTGGCGATCAGGCAGAGAACAAGACTGGCAAGGACGAGAAGGTTGCGAAACCTAAGGATGCCAAGGATCTCACCGACTTCATGGAAAAAAACTACGACTCGATTCAAGGACGTGACAAGCTTCGAAGATTTCTACCATGCCTTCTACGAGCTCATCGAAAAATTCTGTGAGGAACGTGGGCAATTGCAGTACAGGATACCGGAAAAAGCGGAACTTCAGAAGCAGTACGAGA ] [+] EMBL AU174099 [ GGCGCCCCCGTNTGCGCCCTCCTCGCCAAGAGGGTCGTCCCGGGCCTCAAGTCCTTCTCCGACGACGTCGTCATCCCCGTCGCCACCTCCGGCGCCGTCGTNTACCTCGCCAAGACCAACAAGCTGTGATCGAGGTGAATCGATCGTTCCAGAATCATATCCAGACTATGGCTAACAAATTATCGCGAGAATAAAGGTGAGGGAGAAAAAACGTACGTGGTGTCATGTCGTATAAAGTTTGCGTTGTGGCCTTGGTTAAATTTCGCCCAAATTGTAAAGATTATTTGAGAGTGGATTTTTATATTCACTCTCTTTTATATGTCTTCACTGTTCACACCTGTGAAATNTAGGAGAAATCTGTATAATAATATTCGTAAAATCTGATATGTGCACATGCACGAATCCTAGTTCGTCCCCAAAAAAAAAAAAA] consensusID : consensus_13091#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 309 fasta sequence [TCTGAGNTGAATCGATCCGTTCCAGAATCATATCCAGACTATGGCTAACAAATTATCGCGAGAATAAAGGTGAGGGAGAAAAAACGTACGTGGTGTCATGTCGTATAAACGNCNCNCCCNNNCCCCCCCTNNNCTNTAAATTTCGCCCAAATTGTAAAGATTATTTGAGAGTGGATTTTTATATTCACTGCTGCTTTTATATGTCTTCACTGTTCACAGCCTGTGAAATCTAGGAGAAATCTGTATAATAATATTCGTAAAATCTGATATGTGCACATGCACGAATCCTAGTTCGTCCCCAAAAAAAAA] [+] EMBL AU089794 [TCTGAGNTGAATCGATCCGTTCCAGAATCATATCCAGACTATGGCTAACAAATTATCGCGAGAATAAAGGTGAGGGAGAAAAAACGTACGTGGTGTCATGTCGTATAAACGNCNCNCCCNNNCCCCCCCTNNNCTNTAAATTTCGCCCAAATTGTAAAGATTATTTGAGAGTGGATTTTTATATTCACTGCTGCTTTTATATGTCTTCACTGTTCACAGCCTGTGAAATCTAGGAGAAATCTGTATAATAATATTCGTAAAATCTGATATGTGCACATGCACGAATCCTAGTTCGTCCCCAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13091#0 TCACGCTTCACTCTCCTTCCTCCCACCATCCCGATCTCCGGCGATGTCGCTCCACCAGCG 60 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GCCGCACCAGAAGCCGCCGGCGACCGACTCCCTCCCCGCCTCCGCCGCCGCCGCCGCCGC 120 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CGCGCCTTCTCGCCCGCTCCCACTCCTCACCCTCCCTTACCTCTTCTCCCTCCTCGCGCT 180 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CCTCCTCCTCCTCGCCCTCCTCTTCCCCTGGGGCCCTCCCAGCCACTCCTCTGCCCCCGC 240 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CTCGCCGTGGCGGGGGTACACGCTCCAGGAGGCCGCCGCCTTCGCCGCTCGCGCGGGAAA 300 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CGGCACCATCGTCCTCGCCGCCGTCTCCGGGCCCTACCTCCCCTTCCTCTCCAACTGGCT 360 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CATCACCGTCCGCCGCGCCGGCCGCGCCGACCAGGTGCTCGTCGTCGCCGAGGACTATGA 420 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CACGCTCGAGCGGATCAATGCGGCGTGGCCGGGACACGCCGTCCTCGTGCCCCCCGCGCC 480 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CGACGCCCAGGTCGCCCACAAGTTCGGATCCCAGGGGTTCTTTAACTTCACCTCGCGGCG 540 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GCCGCGGCACTTGCTGCAGATTCTTGAGCTAGGGTACAGTGTCATGTACAACGATGTCGA 600 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CATGGTGTGGCTCGCCGACCCATTCCCGTATATCGTCGGGGATCATGACGTGTACTTCAT 660 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GGATGATATGACTCCTGTGAAGCCATTGGATCATTCACATGAGCTGCCACCACCTGGTAA 720 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GAAGGGGCGGACTTACATCTGCAGCTGCATGATATTCCTGCGGCCAACGGAAGGGGCTAA 780 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GCTGCTATTGAGGAAGTGGATTGAGGAGCTCAAGGAGCAGCCCTGGTCAAAGAAGCAGAA 840 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 AGCAAATGATCAGCCAGCATTCAACTGGGCTTTGAACAAGACTGCAGGACAGGTAGATGT 900 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GTATCTGCTGCCTCAGTCTGCATTTCCAACTGGAGGTTTATATTTTAAGAATAAAACATG 960 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GGTAAAGGAAACAAAGGGCAAGCATGTCATCATACACAATAACTATATCACAGGATTTGA 1020 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GAAGAAGATAAAACGGTTTCGTGATCATGGGCTATGGCTTGTCGATGAACATAGTGATGA 1080 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GTCACCACTTGGTAGAATATGAGCAAGCTGGCAAAGCTACACCACATCTGTCCTTGCAAC 1140 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 AGCATCAAACTTTTGCAGCTGGTGTTTAACTGGTTGGGATTGCGGAACCGTGGGATTGAT 1200 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TTGCCATCCGCCACACAAAAATACAGCAACTGGATATGTGCAGTAGTTTTTAATTGTACA 1260 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TCAAGCCCCTTTCAGAGCGACCTGTTGTCATGATGATTATTTTTATTTCATTATCTTTTA 1320 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CGAATACGGCAGCAGTAAGATCTTAGGGTGAGAATGTAGCTATTTAAGGGAATGTGGCCA 1380 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CAAATATTAGCGAGTCAAGTAGTAACTCATTGGTCTATATGTATAGCATGGTAATTTTGT 1440 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TAACCTGTAGGCATTTTTTTTGACACTGGATTGTGTTTAATATTATTCTTTTTACCTCCT 1500 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TTCATAAAGAACTCTAACTGTCATGTGTGATGGCCTGCTGGGTGTCCACAAAACTGTGCT 1560 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 AATGATGACTTGTAAGTTGTAATTCCGTATATAATTATTTAACATGCTCAGGTAATCCCT 1620 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TGCTTTTCTTTACCATCGCAATGCAACACATGAGATGAGTAGACCTTTCTTAGTATGCAT 1680 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TAAATATGGCATGCCTCTCTGAAACATACAGGACACACAGGACTATGATGAAGTGGCACA 1740 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 AGATAAGATGGCTACATATAAGAGGGATCAGGATTCACGGCTGTATCATGTGAATTTTGG 1800 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 AGCATAAAGCTTCAGTTCGAGGCTTTGGGCCTTGTGACCTTCTCGTCTCTCCATGTCTAT 1860 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TATTTTTCTTCACACAAACCTGCGGAGCTTGATGCGTCAGGATCGAATCGCCTGTTTTGG 1920 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CTCATTCCATTCCAGCCAAAACGCTTGCGATTGGAGTAAGAATCCAAGAACCAGTGTGGC 1980 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TGCTGCCATTGGACCCTTTCCTTCTCTGGTGCCTCCCAACTTTGCTTCCAGCAGCGGTAA 2040 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TGCCGTTGCCTTTGCCACACACAACGAACACCGGCGCGCACACATGTATATATGCTTCTG 2100 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CCCATGCTCGGATCTGCACAGAAAACACCATATTTCTTCCTTGTGATCACGAGCTAACCT 2160 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TGCATCTCTCATTGTCTTTGGCAAGGATCGATGGGCCAGGCTGCTGCCAAGGCGAAGCAA 2220 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GGTGGCGATCAGGCAGAGAACAAGACTGGCAAGGACGAGAAGGTTGCGAAACCTAAGGAT 2280 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GCCAAGGATCTCACCGACTTCATGGAAAAAAACTACGACTCGATCAAGGACGTGACAAGC 2340 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TTCGAAGATTTCTACCATGCCTTCTACGAGCTCATCGAAAAATTCTGTGAGGAACGTGGG 2400 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 CAATTGCAGTACAGGATACCGGAAAAAGCGGAACTTCAGAAGCAGTACGAGAGGGTGAAC 2460 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 AAGAGCCCCCAGAAGGGGCAGAACCTGAGCAGGAAGCAGTTCATGGAGCTGGCCGGGCAG 2520 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 GTGATCAAGGTGAACAGCTTCACCTTCGGCAAGGCCACCATGGACGTGCTGGTCGTCCTC 2580 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TTCGGCGCCCCCGTCTGCGCCCTCCTCGCCAAGAGGGTCGTCCCGGGCCTCAAGTCCTTC 2640 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 TCCGACGACGTCGTCATCCCCGTCGCCACCTCCGGCGCCGTCGTCTACCTCGCCAAGACC 2700 consensus_13091#1 ------------------------------------------------------------ consensus_13091#0 AACAAGCTGTGATCGAGGTGAATCGATC-GTTCCAGAATCATATCCAGACTATGGCTAAC 2759 consensus_13091#1 -----------TCTGAGNTGAATCGATCCGTTCCAGAATCATATCCAGACTATGGCTAAC 49 *** ********** ******************************* consensus_13091#0 AAATTATCGCGAGAATAAAGGTGAGGGAGAAAAAACGTACGTGGTGTCATGTCGTATAAA 2819 consensus_13091#1 AAATTATCGCGAGAATAAAGGTGAGGGAGAAAAAACGTACGTGGTGTCATGTCGTATAAA 109 ************************************************************ consensus_13091#0 GTTTGCGTTGTGGCC-----TTGG--TTAAATTTCGCCCAAATTGTAAAGATTATTTGAG 2872 consensus_13091#1 CGNCNCNCCCNNNCCCCCCCTNNNCTNTAAATTTCGCCCAAATTGTAAAGATTATTTGAG 169 * ** * ********************************* consensus_13091#0 AGTGGATTTTTATATTCACTCT--CTTTTATATGTCTTCACTGTTCACA-CCTGTGAAAT 2929 consensus_13091#1 AGTGGATTTTTATATTCACTGCTGCTTTTATATGTCTTCACTGTTCACAGCCTGTGAAAT 229 ******************** ************************* ********** consensus_13091#0 CTAGGAGAAATCTGTATAATAATATTCGTAAAATCTGATATGTGCACATGCACGAATCCT 2989 consensus_13091#1 CTAGGAGAAATCTGTATAATAATATTCGTAAAATCTGATATGTGCACATGCACGAATCCT 289 ************************************************************ consensus_13091#0 AGTTCGTCCCCAAAAAAAAAAAAA 3013 consensus_13091#1 AGTTCGTCCCCAAAAAAAAA---- 309 ******************** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||