These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13106#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 4348 fasta sequence [GCTCCCCGCATCCTCCCATCTCGCCGCGTTATCGCCTTCCGCCTCCTCCTCCGCCGCCGCCTACGCTTCTCGCCGCCGCCGCCGCCGCCTACGCTTATCTTGTTGTGCTGGTTGCATGCGCCGCGGCGCAGGGGCTGACGGAGAGGGGTGCGCGTGGAATTGAGAGGAGTGGCGGATGGAGGCGGTGGAGGAGCAGGTGGCGCCGGAGCAGGTCATCAGCACGAGGGGAGGCTCGGTGTTCGGGAAGAAGACCATCCTCAAGAGCGACCACTTCCCCGGCTGCCAGAACAAGCGCCTCTCGCCGCAAATCGACGACGCGCCCAATTATCGCCAGGCGGGTTCTTTACGAGTTCATGGTGTTGCAATGCCGACAATGAAGGGAATTGTAAATGTGTTAAATCACATTGGAGCACAAAAGAAAGGAAAACAAACCCAGGTTCTATGGCATAGTCTTCGCGAGGAGCCGGTTATCTACATCAATGGTCGCCCTTTTGTTCTGCGAGATGTTGAAAGGCCCTTCTCAAACCTTGAATATACGGGAATTAACCGGGAAAGAGTGGAACAGATGGAGTTTCGCCTGAAAGAAGATATTCTTCAGGAAGCTTCACGATATGGTAATAAGATCCTCGTCACTGATGAGCTGCCAAATGGTCAGATGGTGGACCAGTGGGAGTCAGTGGTAACTGATACAGTCAAGACCCCTCTTGAGGTATATGAGGAGTTGCAGCATCAAGGATACCTTGTAGATTATGAGCGTGTTCCTATTACTGATGAAAAGGCCCCAAAAGAAGGAGATTTTGACAATCTGGTACGCCGAATCTCCCAAGTTGATATAGAAACTGGAATCATATTTAATTGTCAAATGGGGAGGGGAAGGACAACCACTGGTATGGTTATAGCAACATTGATTTATCTGAACCGGATAGGATCATCAGGTATCCCTAGGACAAGTTCAATCGGGAAAGTCTTCCATTCTGGAAATGATGTAGATGACTATATGCCTAGCTCAGAAGAAGCTATCCTCAGAGGAGAATATTCTGTCATTAGGAGCTTGGTACGAGTTCTGGAGGGTGGTGTTGAAGGAAAAAGGCAAGTTGACAAAGTTATTGATAAATGTGACACGATGCAGAACTTAAGAGAGGCTATTGCTACATACCGCAATAGTATTCTTCGACAACCTGATGAGATGAAACGGGAGGCATCACTTTCCTTCTTTGTTGAGTACTTGGAACGTTATTACTTCCTCATATGCTTTGCTGTCTATGTTCATTCAGTGTGCTCTGCTCAACAATCAAACTTTTCAGAAGAAGTTAGTTTTTCTGATTGGATGAGAGCAAGGCCTGAACTGTACAGCATTCTTCGAAGGCTGTTGAGGAGAGATCCAATGGGCGCTCTTGGTTATTCAAGTTCGAAACCCTCTCTTGCAAAAATTGTTGAATATGCTGATGGACGCCCTCATGAGATGGATATTGTTGCTGCCATGAGAAATGGAGAAGTTCTTGGACGCCAAACTGTGTTAAAAAGTGACCACTGCCCAGGTTGTCACAACCTTCATTTACCCGAAAGAGTGGAGGGTGCACCTAATTTTAGGGAAATTCCTGAATTTCCGGTTTATGGTGTTGCAAACCCTACTGTTGATGGCATTCGAGCTGTTATTCAGCGTATTAGTACAAGCAAGGGAGGGCGACCAATTCTGTGGCATAATATGAGAGAAGAACCAGTTATTTATATAAATGGGAAGCCATTTGTACTACGTGAAGTGGAAAGACCATACAAGAATATGCTGGAGTACACGGGAATTGATCGTGATAGGGTGGAACGAATGGAAGCTCGTTTGAAGGAGGATATTTTACGGGAAGCGGAACGCTATAGTGGGGCCATAATGGTTATTCATGAAACTGACAATGGCGAGATATTTGATGCATGGGAAAATGTAAATAATGAAGCTGTCCTGACTCCATTGGAGGTGTACAAACTTCTGGAGTCTGAAGGTCTTCCAATCAAGTATGCTCGAGTGCCAATCACTGATGGCAAAGCCCCCAAAAGTTCAGATTTTGACACAATAACCTTAAATGTGGCAGCTGCTCACAAGGATACTGCATTTGTTTTTAATTGCCAGATGGGCAGGGGAAGAACAACTACAGGTACTGTGATTGCTTGTCTGCTGAGATTGCGAATTGATCATGGCAGACCTATTAGATTGCCAGCTTGTGAATATAACCATGAAGATCCAAATGAATTGGGTTACTCAAGTGGAGAAGAAACAACGGATCACAATGGTCACCTTAATTCAAGTTCACCAAGACCTCATACTGTGACAGAACAACATCCTAGATTTGGAATTGATGACATACTTGTTTTGCGGAAGATTACAAGATTATTTGACAACGGAATCGAGTGTAGACAAACTTTGGATAATGTTATTGACAAATGCTCGGCTTTACAGAATATTCGCCAGGCTGTTTTGCAGTACACAAAAGTAATTAACCAACAGCATGTGGAGCAAAGAGTTAAGAGGGTTGCATTAAATCGTGGTGCTGAATATTTGGAGAGGTACTTGAAATTAGTTGCATTCTCAGCATATCTTTGGAGTGAAGCATTTGATGGTTTCTGCGGGCAAGGAGAGGCAAAGATGTCATTTAAAGCATGGA-TACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACGACCTGGGCG-TTTTTTCACTGTTAATGATGAATCCAAAGCATCTTTTCAGCCTTCACAAGGTGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATCAATACTCAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGGTGCACCACAAGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGTTGATGGAGCAAA-AGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGGGAGAAGCATTCCTCAAAAGGTGGTTGTCACGGATCTTAGGGAGGAAGTGGTTGTTTACATCAAGGGAACACCTTTTGTTTTGAGAGAACTAGATCAGCCTGTTGATACTCTTAAGCATGTTGGCATAAGTGGGCCAATGGTTGAAAACATAGAGGCAAGACTAAAGGAGGATATACTCTCCGAAGTTAAACAACAAGGTGGTCGGCTACTTCTGCACCAAGAAGAATTTAACTCGTCAACAGGCCAAAGTAGTGTTGTAGGTTTTTGGGAACATATAGGTACGGAGGATGTGATGACACCGGCTGAAGTATATAGTGTACTGAGAAATCAGGGGTACTGTATCGACTACAAAAGAATACCTCTCACCAGGGAAAGAGAAGCATTAGCTTCTGATGTAGATGCAATACAATCGTCGGTTGATGAGAATGCTAGGTACTACCTCTTTATTTCACACACAGGATATGGTGGTGTTGCTTATGCAATGGCCATTACATGCCTGGGACTGGGAGCAGATGAAAAGTTCATCATGGAACAAACAGCAGAAACACACTTCATATCAACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAAGCAAGGTGACTACCGTGACATATTAAACCTTACAAGGGTACTGGTACATGGCCCAAAATGCAAAGAAGAGGTTGACACTGTTATTGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGATATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACTTGATGATGATGAGACATGGTCATATCTAATGGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCCGATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAGGCCTGAACTTGGCCAT-CT-CTGCGAT-AATCTAAAACT-GGAT-AAATAGATGTATGAG-TTCTC-TCT-CCATTGGATC-ATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC-TTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTT-GTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATAT-CCTTGTTCTGTCTGCTTCTTTATCAGTAACTCAAAACTGTTGCCACATACGGATATTGTAATACGAGCTGTATTATGCAAGTGTACAGTTCAAAGGAAAAAATATATATAGGAAA] [+] EMBL AK067968 [GCTCCCCGCATCCTCCCATCTCGCCGCGTTATCGCCTTCCGCCTCCTCCTCCGCCGCCGCCTACGCTTCTCGCCGCCGCCGCCGCCGCCTACGCTTATCTTGTTGTGCTGGTTGCATGCGCCGCGGCGCAGGGGCTGACGGAGAGGGGTGCGCGTGGAATTGAGAGGAGTGGCGGATGGAGGCGGTGGAGGAGCAGGTGGCGCCGGAGCAGGTCATCAGCACGAGGGGAGGCTCGGTGTTCGGGAAGAAGACCATCCTCAAGAGCGACCACTTCCCCGGCTGCCAGAACAAGCGCCTCTCGCCGCAAATCGACGACGCGCCCAATTATCGCCAGGCGGGTTCTTTACGAGTTCATGGTGTTGCAATGCCGACAATGAAGGGAATTGTAAATGTGTTAAATCACATTGGAGCACAAAAGAAAGGAAAACAAACCCAGGTTCTATGGCATAGTCTTCGCGAGGAGCCGGTTATCTACATCAATGGTCGCCCTTTTGTTCTGCGAGATGTTGAAAGGCCCTTCTCAAACCTTGAATATACGGGAATTAACCGGGAAAGAGTGGAACAGATGGAGTTTCGCCTGAAAGAAGATATTCTTCAGGAAGCTTCACGATATGGTAATAAGATCCTCGTCACTGATGAGCTGCCAAATGGTCAGATGGTGGACCAGTGGGAGTCAGTGGTAACTGATACAGTCAAGACCCCTCTTGAGGTATATGAGGAGTTGCAGCATCAAGGATACCTTGTAGATTATGAGCGTGTTCCTATTACTGATGAAAAGGCCCCAAAAGAAGGAGATTTTGACAATCTGGTACGCCGAATCTCCCAAGTTGATATAGAAACTGGAATCATATTTAATTGTCAAATGGGGAGGGGAAGGACAACCACTGGTATGGTTATAGCAACATTGATTTATCTGAACCGGATAGGATCATCAGGTATCCCTAGGACAAGTTCAATCGGGAAAGTCTTCCATTCTGGAAATGATGTAGATGACTATATGCCTAGCTCAGAAGAAGCTATCCTCAGAGGAGAATATTCTGTCATTAGGAGCTTGGTACGAGTTCTGGAGGGTGGTGTTGAAGGAAAAAGGCAAGTTGACAAAGTTATTGATAAATGTGACACGATGCAGAACTTAAGAGAGGCTATTGCTACATACCGCAATAGTATTCTTCGACAACCTGATGAGATGAAACGGGAGGCATCACTTTCCTTCTTTGTTGAGTACTTGGAACGTTATTACTTCCTCATATGCTTTGCTGTCTATGTTCATTCAGTGTGCTCTGCTCAACAATCAAACTTTTCAGAAGAAGTTAGTTTTTCTGATTGGATGAGAGCAAGGCCTGAACTGTACAGCATTCTTCGAAGGCTGTTGAGGAGAGATCCAATGGGCGCTCTTGGTTATTCAAGTTCGAAACCCTCTCTTGCAAAAATTGTTGAATATGCTGATGGACGCCCTCATGAGATGGATATTGTTGCTGCCATGAGAAATGGAGAAGTTCTTGGACGCCAAACTGTGTTAAAAAGTGACCACTGCCCAGGTTGTCACAACCTTCATTTACCCGAAAGAGTGGAGGGTGCACCTAATTTTAGGGAAATTCCTGAATTTCCGGTTTATGGTGTTGCAAACCCTACTGTTGATGGCATTCGAGCTGTTATTCAGCGTATTAGTACAAGCAAGGGAGGGCGACCAATTCTGTGGCATAATATGAGAGAAGAACCAGTTATTTATATAAATGGGAAGCCATTTGTACTACGTGAAGTGGAAAGACCATACAAGAATATGCTGGAGTACACGGGAATTGATCGTGATAGGGTGGAACGAATGGAAGCTCGTTTGAAGGAGGATATTTTACGGGAAGCGGAACGCTATAGTGGGGCCATAATGGTTATTCATGAAACTGACAATGGCGAGATATTTGATGCATGGGAAAATGTAAATAATGAAGCTGTCCTGACTCCATTGGAGGTGTACAAACTTCTGGAGTCTGAAGGTCTTCCAATCAAGTATGCTCGAGTGCCAATCACTGATGGCAAAGCCCCCAAAAGTTCAGATTTTGACACAATAACCTTAAATGTGGCAGCTGCTCACAAGGATACTGCATTTGTTTTTAATTGCCAGATGGGCAGGGGAAGAACAACTACAGGTACTGTGATTGCTTGTCTGCTGAGATTGCGAATTGATCATGGCAGACCTATTAGATTGCCAGCTTGTGAATATAACCATGAAGATCCAAATGAATTGGGTTACTCAAGTGGAGAAGAAACAACGGATCACAATGGTCACCTTAATTCAAGTTCACCAAGACCTCATACTGTGACAGAACAACATCCTAGATTTGGAATTGATGACATACTTGTTTTGCGGAAGATTACAAGATTATTTGACAACGGAATCGAGTGTAGACAAACTTTGGATAATGTTATTGACAAATGCTCGGCTTTACAGAATATTCGCCAGGCTGTTTTGCAGTACACAAAAGTAATTAACCAACAGCATGTGGAGCAAAGAGTTAAGAGGGTTGCATTAAATCGTGGTGCTGAATATTTGGAGAGGTACTTGAAATTAGTTGCATTCTCAGCATATCTTTGGAGTGAAGCATTTGATGGTTTCTGCGGGCAAGGAGAGGCAAAGATGTCATTTAAAGCATGGA TACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACGACCTGGGCG TTTTTTCACTGTTAATGATGAATCCAAAGCATCTTTTCAGCCTTCACAAGGTGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATCAATACTCAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGGTGCACCACAAGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGTTGATGGAGCAAA AGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGGGAGAAGCATTCCTCAAAAGGTGGTTGTCACGGATCTTAGGGAGGAAGTGGTTGTTTACATCAAGGGAACACCTTTTGTTTTGAGAGAACTAGATCAGCCTGTTGATACTCTTAAGCATGTTGGCATAAGTGGGCCAATGGTTGAAAACATAGAGGCAAGACTAAAGGAGGATATACTCTCCGAAGTTAAACAACAAGGTGGTCGGCTACTTCTGCACCAAGAAGAATTTAACTCGTCAACAGGCCAAAGTAGTGTTGTAGGTTTTTGGGAACATATAGGTACGGAGGATGTGATGACACCGGCTGAAGTATATAGTGTACTGAGAAATCAGGGGTACTGTATCGACTACAAAAGAATACCTCTCACCAGGGAAAGAGAAGCATTAGCTTCTGATGTAGATGCAATACAATCGTCGGTTGATGAGAATGCTAGGTACTACCTCTTTATTTCACACACAGGATATGGTGGTGTTGCTTATGCAATGGCCATTACATGCCTGGGACTGGGAGCAGATGAAAAGTTCATCATGGAACAAACAGCAGAAACACACTTCATATCAACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAAGCAAGGTGACTACCGTGACATATTAAACCTTACAAGGGTACTGGTACATGGCCCAAAATGCAAAGAAGAGGTTGACACTGTTATTGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGATATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACTTGATGATGATGAGACATGGTCATATCTAATGGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCCGATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAGGCCTGAACTTGGCCAT CT CTGCGAT AATCTAAAACT GGAT AAATAGATATATGAG TTATC TCT CCATTGGATC ATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC TTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTT GTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATAT CCTTGTTCTGTCTGCTTCTTTATCAGTAACTCAAAACTGTTGCCACATACGGATATTGTAATACGAGC ] [+] EMBL CF306798 [ GTTTCTAGAGACAAGGATAGGCAAAGATGTCATTTAAAGCATGGACTACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACGACCTGAGCGTTTTTTTCACTGTCAATGATGAATCCAAAGCATATTTTCATGCTTCACAAGGTGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATCAATACTGAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGGTGCACCACAAGTTTTCAAGGCTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGTTGATGGAGCAAA AGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGTGAGA ] [+] EMBL OSR10021A [ CATTTAAAGCATGGA TACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACGACCTGGGCG TTTTTTCACTGTTAATGATGAATCCAAAGCATCTTTTCAGCCTTCACAAGGTGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATCAATACTCAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGGTGCACCACAAGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGNCACCAACTGTTGATGGAGNAAANNGNAGNTNTGTCATATTTGGGCTtcttt ] [+] EMBL AU173107 [ CATTTAAAGCATGGA TACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACGACCTGGGCG TTTTTTCACTGTTAATGATGAATCCAAAGCATCTTTTCAGCCTTCACAAGGTGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATCAATACTCAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGGTGCACCACAAGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGTTGATGGAGCAAA AGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGGGAGAAGCATTCCTCAAAAGGTGGTTGTCACGGATCTTAGGGAGGAAGTGGTTGTTTACATCAAGGGAACACCTTTTG ] [+] EMBL CB622468 [ AAGCACTATCCATTTAAGTGGTGCACCACTTGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGTTGATCGAGCAAA AGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGGGAGAAGCATTCCTCAAAAGGTGGTTGTCACGGATCTTAGGGAGGAAGTGGTTGTTTACATCAAGGGAACACCTTTTGTTTTGAGAGAACTAGATCAGCCTGTTGATACTCTTAAGCATGTTGGCATAAGTGGGCCAATGGTTGAAAACATAGAGGCAAGACTAAAGGAGGATATACTCTCCGAAGTTAAACAACAAGGTGGTCGGCTACTTCTGCACCAAGAAGAATTTAACTCGTCAACAGGCCAAAGTAGTGTTGTAGGTTTTTGGGAACATATAGGTACGGAGGATGTGATGACACCGGCTGAAGTATATAGTGTACTGAGAAATCAGGGGTACTGTATCGACTACAAAAGAATACCTCTCACCAGGGAAAGAGAAGCATTAGCTTCTGATGTAGATGCAATACAATCGTCGGTTGATGAGAATGCTAGGTACTACCTCTTTATTTCACACACAGGATATGGTGGTGTTGCTTATGCAATGGCCATTACATGCCTGGGACTGGGAGCAGATGAAAAGTTCATCATGGAACAAACAGCAGAAACACACTTCATATCAACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAAGCAAAGTGACTACCGTGACATATTAAACCTTACAAGGGT ] [+] EMBL CA882819 [ TTATTTCACACACAGGATATGGTGGTGTTGCTTATGCATTGGCCATTACATGCCTGGGACTGGGAGCAGATGAAAAGTTCATCACGGAACAAACAACAGAAACACACTTCATATCAACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAAGCAAGGTGACTACCGTGACATATTAAACC ] [+] EMBL CA766765 [ aggggGGAACAAACAGCAGAAACACACTTCATAT AACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAAGCAAGGTGACTACCGTGACATATTAAACCTTACAAGGGTACTGGTACATGGCCCAAAATGCAAAGAAGAGGTTGACACTGTTATCGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGATATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACTTGATGATGATGAGACATGGTCACATCTAATGGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCCGATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAGGCCTGAACTTGGCCAT CT CTGCGAT AATCTAAAACT GGAT AAATAGATGTATGAG TTCTC TCT CCATTGGATC ATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC TTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGCTACTAGTTTT GTTTTTCTCCGTTTATTTTGCAATAAATGGTATGTAATTTGGTTATATATATGCATAT CCTTGGTCTGNCTGCTTCTTTATCAGTAACTCAAAACTGNTGNCACGTACGG ] [+] EMBL CB096864 [ AAACATCAGCTGATATAGCTCTCAAGCAAGGTGACTACCGTGACATATTAAACCTTACAAGGGTACTGGTACATGGCCCAAAATGCAAAGAAGAGGTTGACACTGTTATTGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGATATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACT TGATGATGAGACATGGTCATATCTAATAGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCAGATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAGGCCTGAACTTGGCCAT CT CTGCGAT AATCTAAAACT GGAT AAATAGATGTATGAG TTCTC TCT CCATTGGATC ATTGAACAGCTTGTTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC TTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGGTACTAGTTTTGGTTTTTCTCCGGTTATTTTGCAATAAATGGTATGTAATTTGGTTATATATATGCATATCCCTTGg ] [-] EMBL CB622469 [ AGAAGAGGTTGACACTGTTATTGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGATATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACTTGATGATGATGAGACATGGTCATATCTAATGGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCCGATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAGGCCTGAACTTGGCCAT CT CTGCGAT AATCTAAAACT GGAT AAATAGATGTATGAG TTCTC TCT CCATTGGATC ATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC TTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTT GTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATAT CCTTGTTCTGTCTGCTTCTTTATCAGTAACTCAAAACTGTTGCCACATACGGATATTGTAATACGAGCTGTATTATGCAAGTGTACAGTTCAAAGGAAAAAATATATATAGGAAA] [+] EMBL BI809731 [ ttGCCATCCTCCTGCGATAAATCT AAACTGGGATAAAATAGATGTATGAGTTTCTCTTCTCCCATTGGATC ATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATA GGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC TTGTTGGCGCCCATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTT GTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATAT CCTTGTTCTGTCTGCTTCTTTATCAGTAAAAAAAAAa ] [+] EMBL BI797720 [ ATAGATGTATGAG TTCTC TCT CCATTGGATCAATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGACATTGTTGGCCCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATA CTGAGGTTACTA TTTT TTTTTCTCC TTTATTTTCAAATAAATGTTATGTAATTTGTTTATATATATGCATAT CCTT TTCT TCTGCTTCTTaa ] consensusID : consensus_13106#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 232 fasta sequence [NCAGAAAGGAGTAGTTCGTNGGNCATTTTACNAGACTTGTTGGCGCCAATTGGCNCCNGCAAGGATGTNTATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTTGTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATANCCTTGTTCTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU095442 [NCAGAAAGGAGTAGTTCGTNGGNCATTTTACNAGACTTGTTGGCGCCAATTGGCNCCNGCAAGGATGTNTATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTTGTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATANCCTTGTTCTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13106#0 GCTCCCCGCATCCTCCCATCTCGCCGCGTTATCGCCTTCCGCCTCCTCCTCCGCCGCCGC 60 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CTACGCTTCTCGCCGCCGCCGCCGCCGCCTACGCTTATCTTGTTGTGCTGGTTGCATGCG 120 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CCGCGGCGCAGGGGCTGACGGAGAGGGGTGCGCGTGGAATTGAGAGGAGTGGCGGATGGA 180 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GGCGGTGGAGGAGCAGGTGGCGCCGGAGCAGGTCATCAGCACGAGGGGAGGCTCGGTGTT 240 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CGGGAAGAAGACCATCCTCAAGAGCGACCACTTCCCCGGCTGCCAGAACAAGCGCCTCTC 300 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GCCGCAAATCGACGACGCGCCCAATTATCGCCAGGCGGGTTCTTTACGAGTTCATGGTGT 360 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGCAATGCCGACAATGAAGGGAATTGTAAATGTGTTAAATCACATTGGAGCACAAAAGAA 420 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 AGGAAAACAAACCCAGGTTCTATGGCATAGTCTTCGCGAGGAGCCGGTTATCTACATCAA 480 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGGTCGCCCTTTTGTTCTGCGAGATGTTGAAAGGCCCTTCTCAAACCTTGAATATACGGG 540 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 AATTAACCGGGAAAGAGTGGAACAGATGGAGTTTCGCCTGAAAGAAGATATTCTTCAGGA 600 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 AGCTTCACGATATGGTAATAAGATCCTCGTCACTGATGAGCTGCCAAATGGTCAGATGGT 660 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GGACCAGTGGGAGTCAGTGGTAACTGATACAGTCAAGACCCCTCTTGAGGTATATGAGGA 720 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GTTGCAGCATCAAGGATACCTTGTAGATTATGAGCGTGTTCCTATTACTGATGAAAAGGC 780 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CCCAAAAGAAGGAGATTTTGACAATCTGGTACGCCGAATCTCCCAAGTTGATATAGAAAC 840 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGGAATCATATTTAATTGTCAAATGGGGAGGGGAAGGACAACCACTGGTATGGTTATAGC 900 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 AACATTGATTTATCTGAACCGGATAGGATCATCAGGTATCCCTAGGACAAGTTCAATCGG 960 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GAAAGTCTTCCATTCTGGAAATGATGTAGATGACTATATGCCTAGCTCAGAAGAAGCTAT 1020 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CCTCAGAGGAGAATATTCTGTCATTAGGAGCTTGGTACGAGTTCTGGAGGGTGGTGTTGA 1080 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 AGGAAAAAGGCAAGTTGACAAAGTTATTGATAAATGTGACACGATGCAGAACTTAAGAGA 1140 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GGCTATTGCTACATACCGCAATAGTATTCTTCGACAACCTGATGAGATGAAACGGGAGGC 1200 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 ATCACTTTCCTTCTTTGTTGAGTACTTGGAACGTTATTACTTCCTCATATGCTTTGCTGT 1260 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CTATGTTCATTCAGTGTGCTCTGCTCAACAATCAAACTTTTCAGAAGAAGTTAGTTTTTC 1320 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGATTGGATGAGAGCAAGGCCTGAACTGTACAGCATTCTTCGAAGGCTGTTGAGGAGAGA 1380 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TCCAATGGGCGCTCTTGGTTATTCAAGTTCGAAACCCTCTCTTGCAAAAATTGTTGAATA 1440 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGCTGATGGACGCCCTCATGAGATGGATATTGTTGCTGCCATGAGAAATGGAGAAGTTCT 1500 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGGACGCCAAACTGTGTTAAAAAGTGACCACTGCCCAGGTTGTCACAACCTTCATTTACC 1560 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CGAAAGAGTGGAGGGTGCACCTAATTTTAGGGAAATTCCTGAATTTCCGGTTTATGGTGT 1620 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGCAAACCCTACTGTTGATGGCATTCGAGCTGTTATTCAGCGTATTAGTACAAGCAAGGG 1680 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 AGGGCGACCAATTCTGTGGCATAATATGAGAGAAGAACCAGTTATTTATATAAATGGGAA 1740 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GCCATTTGTACTACGTGAAGTGGAAAGACCATACAAGAATATGCTGGAGTACACGGGAAT 1800 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGATCGTGATAGGGTGGAACGAATGGAAGCTCGTTTGAAGGAGGATATTTTACGGGAAGC 1860 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GGAACGCTATAGTGGGGCCATAATGGTTATTCATGAAACTGACAATGGCGAGATATTTGA 1920 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGCATGGGAAAATGTAAATAATGAAGCTGTCCTGACTCCATTGGAGGTGTACAAACTTCT 1980 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GGAGTCTGAAGGTCTTCCAATCAAGTATGCTCGAGTGCCAATCACTGATGGCAAAGCCCC 2040 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CAAAAGTTCAGATTTTGACACAATAACCTTAAATGTGGCAGCTGCTCACAAGGATACTGC 2100 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 ATTTGTTTTTAATTGCCAGATGGGCAGGGGAAGAACAACTACAGGTACTGTGATTGCTTG 2160 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TCTGCTGAGATTGCGAATTGATCATGGCAGACCTATTAGATTGCCAGCTTGTGAATATAA 2220 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CCATGAAGATCCAAATGAATTGGGTTACTCAAGTGGAGAAGAAACAACGGATCACAATGG 2280 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TCACCTTAATTCAAGTTCACCAAGACCTCATACTGTGACAGAACAACATCCTAGATTTGG 2340 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 AATTGATGACATACTTGTTTTGCGGAAGATTACAAGATTATTTGACAACGGAATCGAGTG 2400 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TAGACAAACTTTGGATAATGTTATTGACAAATGCTCGGCTTTACAGAATATTCGCCAGGC 2460 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGTTTTGCAGTACACAAAAGTAATTAACCAACAGCATGTGGAGCAAAGAGTTAAGAGGGT 2520 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGCATTAAATCGTGGTGCTGAATATTTGGAGAGGTACTTGAAATTAGTTGCATTCTCAGC 2580 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 ATATCTTTGGAGTGAAGCATTTGATGGTTTCTGCGGGCAAGGAGAGGCAAAGATGTCATT 2640 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TAAAGCATGGATACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACG 2700 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 ACCTGGGCGTTTTTTCACTGTTAATGATGAATCCAAAGCATCTTTTCAGCCTTCACAAGG 2760 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATC 2820 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 AATACTCAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGG 2880 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGCACCACAAGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGT 2940 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGATGGAGCAAAAGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGGGAGAAGCATTCC 3000 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TCAAAAGGTGGTTGTCACGGATCTTAGGGAGGAAGTGGTTGTTTACATCAAGGGAACACC 3060 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TTTTGTTTTGAGAGAACTAGATCAGCCTGTTGATACTCTTAAGCATGTTGGCATAAGTGG 3120 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GCCAATGGTTGAAAACATAGAGGCAAGACTAAAGGAGGATATACTCTCCGAAGTTAAACA 3180 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 ACAAGGTGGTCGGCTACTTCTGCACCAAGAAGAATTTAACTCGTCAACAGGCCAAAGTAG 3240 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TGTTGTAGGTTTTTGGGAACATATAGGTACGGAGGATGTGATGACACCGGCTGAAGTATA 3300 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TAGTGTACTGAGAAATCAGGGGTACTGTATCGACTACAAAAGAATACCTCTCACCAGGGA 3360 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 AAGAGAAGCATTAGCTTCTGATGTAGATGCAATACAATCGTCGGTTGATGAGAATGCTAG 3420 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GTACTACCTCTTTATTTCACACACAGGATATGGTGGTGTTGCTTATGCAATGGCCATTAC 3480 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 ATGCCTGGGACTGGGAGCAGATGAAAAGTTCATCATGGAACAAACAGCAGAAACACACTT 3540 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CATATCAACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAA 3600 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GCAAGGTGACTACCGTGACATATTAAACCTTACAAGGGTACTGGTACATGGCCCAAAATG 3660 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 CAAAGAAGAGGTTGACACTGTTATTGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGA 3720 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACTTGATGATGATGAGACATGGTC 3780 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 ATATCTAATGGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCCG 3840 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 ATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAG 3900 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 GCCTGAACTTGGCCATCTCTGCGATAATCTAAAACTGGATAAATAGATGTATGAGTTCTC 3960 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TCTCCATTGGATCATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAA 4020 consensus_13106#1 ------------------------------------------------------------ consensus_13106#0 TAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATT 4080 consensus_13106#1 ---------------------------------NCAGAAAGGAGTAGTTCGTNGGNCATT 27 ****************** ** **** consensus_13106#0 TTACCAGACTTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTA 4140 consensus_13106#1 TTACNAGACTTGTTGGCGCCAATTGGCNCCNGCAAGGATGTNTATATAATTCCGAGGTTA 87 **** ********************** ** ********** ****************** consensus_13106#0 AATTGTAGAGGAACATAGCTGAGGTTACTAGTTTTGTTTTTCTCCGTTTATTTTGCAATA 4200 consensus_13106#1 AATTGTAGAGGAACATAGCTGAGGTTACTAGTTTTGTTTTTCTCCGTTTATTTTGCAATA 147 ************************************************************ consensus_13106#0 AATGTTATGTAATTTGTTTATATATATGCATATCCTTGTTCTGTCTGCTTCTTTATCAGT 4260 consensus_13106#1 AATGTTATGTAATTTGTTTATATATATGCATANCCTTGTTCTGTCTAAAAAAAAAAAAAA 207 ******************************** ************* * * consensus_13106#0 AACTCAAAACTGTTGCCACATACGGATATTGTAATACGAGCTGTATTATGCAAGTGTACA 4320 consensus_13106#1 AAAAAAAAAAAAAAAAAAAAAAAAA----------------------------------- 232 ** **** * * * consensus_13106#0 GTTCAAAGGAAAAAATATATATAGGAAA 4348 consensus_13106#1 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||