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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13113#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1479 fasta sequence
[TCCGACTCCGCTCCAATGCCGTTGCCTCTCTCCTCCCCCTCCCCCTCCCCCTCATAAGCGCGTGCGAGCCTCGCCTCGCCCTCGCCTCCGCGACCCAAACCCTAGCCTCCCAGCCCCATCGGAATCCGCCAGCTCGAGCCGGATTCGCCTCCCCACCCACCCACACCGGCGGGGCAGCGGGGATCCGGCGGCGGGGAGCGAGCTGCGCGTTTTTTTTTCCTCCGGGGCATGGTCGTCGCCGCCGCCGCCTGATCGGCTCACCTTGTCCGCACCGACGAGCCGACGATGGGGATGTCGGGGGCCACCAATGGCTGCGGCGCCGGCGAGTACATCAGGATCCCGGAGGACGTGGAGGCCGGGTTGGGGAAGGAGGCGGGGAAGGGGGAGGGGGAGGGGGAGTGCCCCGCCGTGCTGCGGTGGCGCGCGATCCGGTGGTGGGCGC-AGGTCGCCGCCCTCGGGATCCTCCTCGCCGGTGCGGCCGCCGCCGCCGTCGTCTTCCTCGGACCCCTCGTCATTAAAAAGGTGATTGCTCCGGTTATTGAATGGGAGTCAAGAACTTTCAGCAGGCCAGTCATTGCTCTGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCAAAAACTCCAAGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACAGAGGTGCTACTAATCTGGTTTCTAGTGTCTGCTACCTGACTACATTTGATCTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCCTTTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCAATTTCATCAATGTATTGAACCGTGGTCTGTGGTGCAATGTAAATTCGTAATCTGCTGCTTTCTCGAGTGGAAAAA]
[+] EMBL AK065880 [TCCGACTCCGCTCCAATGCCGTTGCCTCTCTCCTCCCCCTCCCCCTCCCCCTCATAAGCGCGTGCGAGCCTCGCCTCGCCCTCGCCTCCGCGACCCAAACCCTAGCCTCCCAGCCCCATCGGAATCCGCCAGCTCGAGCCGGATTCGCCTCCCCACCCACCCACACCGGCGGGGCAGCGGGGATCCGGCGGCGGGGAGCGAGCTGCGCGTTTTTTTTTCCTCCGGGGCATGGTCGTCGCCGCCGCCGCCTGATCGGCTCACCTTGTCCGCACCGACGAGCCGACGATGGGGATGTCGGGGGCCACCAATGGCTGCGGCGCCGGCGAGTACATCAGGATCCCGGAGGACGTGGAGGCCGGGTTGGGGAAGGAGGCGGGGAAGGGGGAGGGGGAGGGGGAGTGCCCCGCCGTGCTGCGGTGGCGCGCGATCCGGTGGTGGGCGC AGGTCGCCGCCCTCGGGATCCTCCTCGCCGGTGCGGCCGCCGCCGCCGTCGTCTTCCTCGGACCCCTCGTCATTAAAAAGGTGATTGCTCCGGTTATTGAATGGGAGTCAAGAACTTTCAGCAGGCCAGTCATTGCTCTGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGGAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCAAAAACTCCAAGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACAGAGGTGCTACTAATCTGGTTTCTAGTGTCTGCTACCTGACTACATTTGATCTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCCTTTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCAATTTCATCAATGTATTGAACCGTGGTCTGTGGTGCAATGTAAATTCGTAATCTGCTGCTT ]
[+] EMBL CB664565 [ GTGCGAGCCTCGCCTCGCCCTCGCCTCCGCGACCCAAACCCTAGCCTCCCAGCCCCATCGGAATCCGCCAGCTCGAGCCGGATTCGCCTCCCCACCCACCCACACCGGCGGGGCAGCGGGGATCCGGCGGCGGGGAGCGAGCTGCGCGTTTTTTTTTCCTCCGGGGCATGGTCGTCGCCGCCGCCGCCTGATCGGCTCACCTTGTCCGCACCGACGAGCCGACGATGGGGATGTCGGGGGCCACCAATGGCTGCGGCGCCGGCGAGTACATCAGGATCCCGGAGGACGTGGAGGCCGGGTTGGGGAAGGAGGCGGGGAAGGGGG ]
[+] EMBL AU091342 [ AGCCTCCCAGCCCCATCGGAATCCGCCAGCTCGAGCCGGATTCGCCTCCCCACCCACCCACACCGGCGGGGCAGCGGGGATCCGGCGGCGGGGAGCGAGCTGCGCGTTTTTTTTTCCTCCGGGGCATGGTCGTCGCCGCCGCCGCCTGATCGGCTCACCTTGTCCGCACCGACGAGCCGACGATGGGGATGTCGGGGGCCACCAATGGCTGCGGCGCCGGCGAGTACATCAGGATCCCGGAGGACGTGGAGGCCGGGTTGGGGAAGGAGGCGGGGAAGGGGGAGGGGGAGGGGGAGTGCCCCGCCGTGCTGCGGTGGCGCGCGATCCGGTGGTGGGCGC AGGTCGCCGCCCTCGGGATCCT ]
[+] EMBL C74198 [ GCCTCCCAGCCCCATCGGAATCCGCCAGCTCGAGCCGGATTCGCCTCCCCACCCACCCACACCGGCGGGGCAGCGGGGATCCGGCGGCGGGGAGCGAGCTGCGC TTTTTTTTTCCTCCGGGGCATGGTCGTCGCCGCCGCCGCCTGATCGGCTCACCTTGTCCGCACCGACGAGCCGACGATGGGGATGTCGGGGGCCACCAATGGCTGCNGCGCCGGCGAGTACATCAGGATCCCGGANGACGTGGAGGCCGGGTTGGGGAAGGAGGCGGGGAAAGGGGANGGGGAAGGGGAGTNCCCCGCCGTGCTGCGGTNGCGCGCGATCCGGTGGTNGGCGCAAGTTTNCCGCCCTCGGGAT TTTCTCGCCGGTGCGGCCGaaa ]
[+] EMBL CF303581 [ TCGTCTTCCTCGGACCCCTCGTCATTAAAAAGGTGATTGCTCCGGTTATTGAATGGGAGTCAAGAACTTTCAGCAGGCCAGTCATTGCTCTGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAA ]
[+] EMBL AU100808 [ TCGTCTTCCTCGGACCCCTCGTCATTAAAAAGGTGATTGCTCCGGTTATTGAATGGGAGTCAAGAACTTTCAGCAGGCCAGTCATTGCTCTGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGNGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGA ]
[+] EMBL CF196505 [ TGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGNNNNNAGCACTTCAAAAACTCCAAGCAGA ]
[+] EMBL CF196465 [ TGATATGTTTCGGCGCAATCGCTTTTTTCCCAAGTGTGTTGCTACCTTCTTCTCCTTTTATGTGGATGGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCNNANACTCCAAGCNNNTGATGAGCTGTGTTGACTCTTGATGnnnacnn ]
[+] EMBL CB000405 [ TGTGGATGGCGGGGATGNCCTTTGGATATTTCCTTTGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCAAAAACTCCAAGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACAGAGGTGCTACTAATCTGGTTTCTAGTGTCTGCTACCTGACTACATTTGATCTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCC TTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCA ]
[-] EMBL CB664566 [ GGCGGGGATGTCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCAAAAACTCCAAGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACAGAGGTGCTACTAATCTGGTTTTTAGTGTCTGCTACCTGACTACATTTGATTTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCCTTTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCAATTTCATCAATGTATTGAACCGTGGTCTGTGGTGCAATGTAAATTCGTAATCTGCTGCTTT ]
[+] EMBL AK121562 [ TCCTTTGGATATTTCTATGGCTTTTTGATAATTACAGCAGCAATGAGCATAGGCATGTCGTTGCCATTCTTTATAGGGTCCGCATTCCATTCTAAAATACACAGGTGGTTGGAGAAGTGGCCGAAGAAAGCAGCTTTTGTTAGACTTGCTGGTGAAGGGGATTGGTTCCATCAATTTAGAGCAGTTGCCTTACTTAGGATCTCTCCATTTCCATATCTAGTTTTTAACTATGCCTCTGTGGCTACAAATGTCAAGTATGGGCCATATATTGCTGGTTCAATGGCTGGAACGGTACATGAAACCTTCCTTGCAATATACAGTGGGAAACTTCTCCAAAGCCTAGCCGTAGCTACTACCCAAGGTTCATTCTTGTCGGTAGATCAGATAATTTACAACGGCCTTGGCTTCTCAGTTGCTGCAGTTTCTACCGCTGCAATAACTATTTATGCGAAGAAAGCACTTCAAAAACTCCAAGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACGGAGGTGCTACTAATCTGGTTTCTAGTGTCTGCTACCTGACTACATTTGATCTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCC TTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCAATTTCATCAATGTATTGAACCGTGGTCTGTGGTGCAATGTAAATTCGTAATCTGCTGCTT ]
[+] EMBL AU100807 [ AGCAGATGATGAGCTGTGTTGACTCTTGATGAGCACAGGAGATCCTACTCCGGATCAGACCTTGGTGCTAGTTTTTCCTTAAAATGTACTATATATATACAGAGGTGCTACTAATCTGGTTTCTAGTGTCTGCTACCTGACTACATTTGATCTGAGAGAGGGTACTGCAACAACTGTAAAGAGAAAATAGAGAACCAGAAAAACACTCCCCCTTTTTTTTTTCTCTTTTTGTTTTTGTTTTTAACTTGTAGAGAAAGTGCTGCCACAACTATCAATTTCATCAATGTATTGAACCGTGGTCTGTGGTGCAATGTAAATTCGTAATCTGCTGCTTTCTCGAGTGGAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||