These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13116#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 3547 fasta sequence [TCCAACCAGGGGCTGTTTTGCAAATCCATTTCGCCTCACCGGAGATGAGATCCCATCGACGCGACGCCGCCGCCTCCTTCCTCCTCCTCTCGTCGGAGCCACCGCCGGGAGGGATTCATCGCGAGCGGCGGCTGAATTGGAACAGGTGAAACCAATGCAGCCGCACCCGCAGCCAGTGAGGAGATCGTCGTCTCCGGCCTCCGGGAATAGCAGTTTTTGATCGAAGACGCTTATGAAGGTAATTTATTAACGGTGTTTGTGCATTTGTGGAATTGTGGATAGCTATTCTGATTTTCATGCTCTCTTGCTATTTACTATAGCCTTAACAGAGAAAATTATAGGTCATAATCAAGGTGCTTAAATACTGTCTAACTACTTCATGTAGTAACCAAGTGAACACCATGTTTGATTCGATAACTACATTAAATACAAACCAAAAAAGTTACTAGCAAGGCACATCTATTTAGCTAGTAAAGACAAACCCCTAACAACCAATAGATAGAATGGTTAACCTTTTTTATTCCTCTCGAAACCCTTACAGCCAACAGATAGAAATATAAAATGGTGGTTTCCTGACAAAGTTCTAGGGACAGCAACAGAACAAGTGGATGAGAACACAGATAATTGTGTGCGCCTGCGTTGCTCGATTACTCGAAGCAGCCAGTGTGGTAAGAATCCCAATCCTGTCTCCTCTGTGGGCTGGTCAGTCAATGAAGAATGAAGAATCTGCTTCATGCCTACCAAGTACCAAATGCTATCCTCGCACGTGCATTCCAAACTTTCCGAGACTCTGTTCTTCCCAAGGACCCATAGGCTAAAGAGAATCACAATGGAGTATGTAGTATAGTTTAGAATTTGGGTTGGATGGATGGGTGTACACCGTGCACCTAGTAAGACAAAGTAGCAAACTTTGCGCCATTATATTTTTCAGAATGAAACACATGGTTCGTTGTGCCATTATATATATACTGTTATTTTTTCTGATCCTAACTCCTATCTACGCTTTTGAAATGAGTTGGGAAAAGCAATTTAAGAACTCTTCCAGCTTCCATTCACTTGCAAATTGAAACCAAATCATATGGTTCTGCTCCTCGAACAATCAGTTAAGATTGCAGACAAAACCAATTACCAAAGGCTCAAAGCTGCCCTGAAGGTAGGCCCGATCTATGGATGAAAACAGTAATACGATAAGTACTCCTTTTCTGAAGTGAGATCAGTGTGCGTACAAAGAAATAAATCATCCAACAGCCAACAGATAGAATGGTTAGCCTTTTTATTCCTCTCAAACCCTTACAGCCAACAGATAGAATAGTAAGCCTCTTTGTCCTTCTCAAACTGTAAGACGGTGGCTTCCTGCCGAAGTTCCATGGACAGCAACGGAACAAGCGGATAATAAAACAGACAATTGTGTGTACTTGTGCTGCTCGATCACTCGAAGTAGCCAGTGTGGTAAGAATCTCATCCTGTTTCCTCCGTGGGCTGGTCAGTCACTGAAGAATGAAGAATCTGCTTCATGCCTACCAAGTACCAAATGCTATCCTCGCACGTGCTTTCCAAACTTTCCGAGATACTATTCTTCTCAAGGACCCATAGGCTAGAGGGAATCACAATGGAGAATGTAGTACAGTTTAGAATTTGGGTTAGATGGGTACACATAATAAGACAAAGTAGAAAACTTTATGCCATTATATTTTTCAGAAGGGCTAATGTTCTGGCAGCAAAATATTCTAGAGAACGCATATCTATTTTTTCTGGTTCTAAGTCCTCCTAACTCCTATGCACATAGTATTTGAAAATGAGTTGGGAGGCAGTTTAAGAACTCTTCCAGTTTCCATTCGCTTTAAACCAAATCATATGACTGTACTAACACAATCAATTCAGTATTTTCAGAATGCGGAGATGAAAGGTTCGAAGCAGCCTAGAAGATCCATGGACGAAAATACTAATATGATAAGTAGTTTTCATCGTACATATGGAGTGTATGTTAAACTAAAGAAAAACTCCTACATGGTTCGTGGGACAAAAATGATGATACTAGTGAATTACAACTTAAATATGTGGCCAATATCATGATCATCTCAGAAAGTGAGATCAGTGTGCCCACAAAGAAATAATTCATCTTCATATACACACACACACTGTAGTCTGAAGTTGATCCTACAATTGCAGCTGGCTGGTCATCACAGCGAGAACTGGAATCAAATAATTGAAATGCCGACGTATCACAGAAAAAGATAAGCCATTCTCTCTCGTCCTATCAGATAAAAGCTGGAACGTAACAGTGTGATATTTTTCTGCAGGTCCAAATAACAAAACAACGTGATACACACAAGTGGAAGGTTTTCCATTATCTAAAAAAGCGCACACAAAATGGGAGATACGATGCCAAAGTAAAGAGAGCAAATGTCGTGTCTTCCACTATGAGCAAAGAACCCTTGCAACCTGCAGATAGAAACGAATAAAGCTACGATAAAAATTGTCACTTAAATAGATATACACTCATTTCATACATGTCACCTAAAAAGTCATGATTTTTTTTAAAAAAAATTAGCAAGATAGATCAATATATATTATTTCAATTTTTAAAGTTAAAATTCAACCTACACAAGTAGAAAAAAAAAACTATCAAAAGTGCATACTATTACAATTAATATTTGTTACTTAATTATTTATTTATATGAGTCAAATTTGAAGTTACATGTTTGTAGAATAATATATCATATAGTATTGAGTTATCTTACTAATTTTTCAGGTGATGTGTATGAAACAAGTGTATGTACATTCGAGTGACAAAAACCACATCCTAATGCAACGATGTGAACATCCAAGGGCAGTATAAAAGGAGGTGCAGCTGCGAGGCATTGACCTGCACTCCCTTCCTCCTAGCTCGAAGTGAGCAAT-CACTCTTGTGAAACTTTTGCAGACGCCAGCCATGGCGATCAGGGGCAT-CCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAACTGGCTGAAGCAGTTCGACACCGACAACGACG-GCCGGATAAGCCGGGGCGAGCTCCGGGAGGCCATCCGCCGCCGCGGCGGCTG-GTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGCCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCCCAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACTGGCAGCAATAAGCATTATTAAGCTAGTTTCATGGATTTTCATATGC-TTGAGCTTAAAATGGGTAGAGAGCA-CT-GTGGCAGTAGTGCTAGCTTTT-GATTAAGCTATAAAAATATTGCCTTCTATGTTGC-TTTTCTTTGCTGTGTGGT-AGTAACTGGTAAAGTTTGAC-TTGCATGCCAGCTTCTCCTGAATAATTTGTGTAAAAGC-AGGAGAATGTCTGCCATGATGC-TGTGATACTTTGAGTGATCCTCTGTTGGTATTGACTCTGGTGAAGATGAAAATGAATTGGTGATTATGGCCATTTTAGTAAAAAAAAAAACTTAAAAAG] [+] EMBL AK100302 [TCCAACCAGGGGCTGTTTTGCAAATCCATTTCGCCTCACCGGAGATGAGATCCCATCGACGCGACGCCGCCGCCTCCTTCCTCCTCCTCTCGTCGGAGCCACCGCCGGGAGGGATTCATCGCGAGCGGCGGCTGAATTGGAACAGGTGAAACCAATGCAGCCGCACCCGCAGCCAGTGAGGAGATCGTCGTCTCCGGCCTCCGGGAATAGCAGTTTTTGATCGAAGACGCTTATGAAGGTAATTTATTAACGGTGTTTGTGCATTTGTGGAATTGTGGATAGCTATTCTGATTTTCATGCTCTCTTGCTATTTACTATAGCCTTAACAGAGAAAATTATAGGTCATAATCAAGGTGCTTAAATACTGTCTAACTACTTCATGTAGTAACCAAGTGAACACCATGTTTGATTCGATAACTACATTAAATACAAACCAAAAAAGTTACTAGCAAGGCACATCTATTTAGCTAGTAAAGACAAACCCCTAACAACCAATAGATAGAATGGTTAACCTTTTTTATTCCTCTCGAAACCCTTACAGCCAACAGATAGAAATATAAAATGGTGGTTTCCTGACAAAGTTCTAGGGACAGCAACAGAACAAGTGGATGAGAACACAGATAATTGTGTGCGCCTGCGTTGCTCGATTACTCGAAGCAGCCAGTGTGGTAAGAATCCCAATCCTGTCTCCTCTGTGGGCTGGTCAGTCAATGAAGAATGAAGAATCTGCTTCATGCCTACCAAGTACCAAATGCTATCCTCGCACGTGCATTCCAAACTTTCCGAGACTCTGTTCTTCCCAAGGACCCATAGGCTAAAGAGAATCACAATGGAGTATGTAGTATAGTTTAGAATTTGGGTTGGATGGATGGGTGTACACCGTGCACCTAGTAAGACAAAGTAGCAAACTTTGCGCCATTATATTTTTCAGAATGAAACACATGGTTCGTTGTGCCATTATATATATACTGTTATTTTTTCTGATCCTAACTCCTATCTACGCTTTTGAAATGAGTTGGGAAAAGCAATTTAAGAACTCTTCCAGCTTCCATTCACTTGCAAATTGAAACCAAATCATATGGTTCTGCTCCTCGAACAATCAGTTAAGATTGCAGACAAAACCAATTACCAAAGGCTCAAAGCTGCCCTGAAGGTAGGCCCGATCTATGGATGAAAACAGTAATACGATAAGTACTCCTTTTCTGAAGTGAGATCAGTGTGCGTACAAAGAAATAAATCATCCAACAGCCAACAGATAGAATGGTTAGCCTTTTTATTCCTCTCAAACCCTTACAGCCAACAGATAGAATAGTAAGCCTCTTTGTCCTTCTCAAACTGTAAGACGGTGGCTTCCTGCCGAAGTTCCATGGACAGCAACGGAACAAGCGGATAATAAAACAGACAATTGTGTGTACTTGTGCTGCTCGATCACTCGAAGTAGCCAGTGTGGTAAGAATCTCATCCTGTTTCCTCCGTGGGCTGGTCAGTCACTGAAGAATGAAGAATCTGCTTCATGCCTACCAAGTACCAAATGCTATCCTCGCACGTGCTTTCCAAACTTTCCGAGATACTATTCTTCTCAAGGACCCATAGGCTAGAGGGAATCACAATGGAGAATGTAGTACAGTTTAGAATTTGGGTTAGATGGGTACACATAATAAGACAAAGTAGAAAACTTTATGCCATTATATTTTTCAGAAGGGCTAATGTTCTGGCAGCAAAATATTCTAGAGAACGCATATCTATTTTTTCTGGTTCTAAGTCCTCCTAACTCCTATGCACATAGTATTTGAAAATGAGTTGGGAGGCAGTTTAAGAACTCTTCCAGTTTCCATTCGCTTTAAACCAAATCATATGACTGTACTAACACAATCAATTCAGTATTTTCAGAATGCGGAGATGAAAGGTTCGAAGCAGCCTAGAAGATCCATGGACGAAAATACTAATATGATAAGTAGTTTTCATCGTACATATGGAGTGTATGTTAAACTAAAGAAAAACTCCTACATGGTTCGTGGGACAAAAATGATGATACTAGTGAATTACAACTTAAATATGTGGCCAATATCATGATCATCTCAGAAAGTGAGATCAGTGTGCCCACAAAGAAATAATTCATCTTCATATACACACACACACTGTAGTCTGAAGTTGATCCTACAATTGCAGCTGGCTGGTCATCACAGCGAGAACTGGAATCAAATAATTGAAATGCCGACGTATCACAGAAAAAGATAAGCCATTCTCTCTCGTCCTATCAGATAAAAGCTGGAACGTAACAGTGTGATATTTTTCTGCAGGTCCAAATAACAAAACAACGTGATACACACAAGTGGAAGGTTTTCCATTATCTAAAAAAGCGCACACAAAATGGGAGATACGATGCCAAAGTAAAGAGAGCAAATGTCGTGTCTTCCACTATGAGCAAAGAACCCTTGCAACCTGCAGATAGAAACGAATAAAGCTACGATAAAAATTGTCACTTAAATAGATATACACTCATTTCATACATGTCACCTAAAAAGTCATGATTTTTTTTAAAAAAAATTAGCAAGATAGATCAATATATATTATTTCAATTTTTAAAGTTAAAATTCAACCTACACAAGTAGAAAAAAAAAACTATCAAAAGTGCATACTATTACAATTAATATTTGTTACTTAATTATTTATTTATATGAGTCAAATTTGAAGTTACATGTTTGTAGAATAATATATCATATAGTATTGAGTTATCTTACTAATTTTTCAGGTGATGTGTATGAAACAAGTGTATGTACATTCGAGTGACAAAAACCACATCCTAATGCAACGATGTGAACATCCAAGGGCAGTATAAAAGGAGGTGCAGCTGCGAGGCATTGACCTGCACTCCCTTCCTCCTAGCTCGAAGTGAGCAAT CACTCTTGTGAAACTTTTGCAGACGCCAGCCATGGCGATCAGGGGCAT CCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAACTGGCTGAAGCAGTTCGACACCGACAACGACG GCCGGATAAGCCGGGGCGAGCTCCGGGAGGCCATCCGCCGCCGCGGCGGCTG GTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGCCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCCCAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACTGGCAGCAATAAGCATTATTAAGCTAGTTTCATGGATTTTCATATGC TTGAGCTTAAAATGGGTAGAGAGCA CT GTGGCAGTAGTGCTAGCTTTT GATTAAGCTATAAAAATATTGCCTTCTATGTTGC TTTTCTTTGCTGTGTGGT AGTAACTGGTAAAGTTTGAC TTGCATGCCAGCTTCTCCTGAATAATTTGTGTAAAAGC AGGAGAATGTCTGCCATGATGC TGTGATACTTTGAGTGATCCTCTGTTGGTATTGACTCTGGTGAAGATGAAAATGAATTGGTGATTATGGCCA ] [+] EMBL AK072381 [ TAACGGTGTTTGTGCATTTGTGGAATTGTGGATAGCTATTCTGATTTTCATGCTCTCTTGCTATTTACTATAGCCTTAACAGAGAAAATTATAGGTCATAATCAAGGTGCTTAAATACTGTCTAACTACTTCATGTAGTAACCAAGTGAACACCATGTTTGATTCGATAACTACATTAAATACAAACCAAAAAAGTTACTAGCAAGGCACATCTATTTAGCTAGTAAAGACAAACCCCTAACAACCAATAGATAGAATGGTTAACCTTTTTTATTCCTCTCGAAACCCTTACAGCCAACAGATAGAAATATAAAATGGTGGTTTCCTGACAAAGTTCTAGGGACAGCAACAGAACAAGTGGATGAGAACACAGATAATTGTGTGCGCCTGCGTTGCTCGATTACTCGAAGCAGCCAGTGTGGTAAGAATCCCAATCCTGTCTCCTCTGTGGGCTGGTCAGTCAATGAAGAATGAAGAATCTGCTTCATGCCTACCAAGTACCAAATGCTATCCTCGCACGTGCATTCCAAACTTTCCGAGACTCTGTTCTTCCCAAGGACCCATAGGCTAAAGAGAATCACAATGGAGTATGTAGTATAGTTTAGAATTTGGGTTGGATGGATGGGTGTACACCGTGCACCTAGTAAGACAAAGTAGCAAACTTTGCGCCATTATATTTTTCAGAATGAAACACATGGTTCGTTGTGCCATTATATATATACTGTTATTTTTTCTGATCCTAACTCCTATCTACGCTTTTGAAATGAGTTGGGAAAAGCAATTTAAGAACTCTTCCAGCTTCCATTCACTTGCAAATTGAAACCAAATCATATGGTTCTGCTCCTCGAACAATCAGTTAAGATTGCAGACAAAACCAATTACCAAAGGCTCAAAGCTGCCCTGAAGGTAGGCCCGATCTATGGATGAAAACAGTAATACGATAAGTACTCCTTTTCTGAAGTGAGATCAGTGTGCGTACAAAGAAATAAATCATCCAACAGCCAACAGATAGAATGGTTAGCCTTTTTATTCCTCTCAAACCCTTACAGCCAACAGATAGAATAGTAAGCCTCTTTGTCCTTCTCAAACTGTAAGACGGTGGCTTCCTGCCGAAGTTCCATGGACAGCAACGGAACAAGCGGATAATAAAACAGACAATTGTGTGTACTTGTGCTGCTCGATCACTCGAAGTAGCCAGTGTGGTAAGAATCTCATCCTGTTTCCTCCGTGGGCTGGTCAGTCACTGAAGAATGAAGAATCTGCTTCATGCCTACCAAGTACCAAATGCTATCCTCGCACGTGCTTTCCAAACTTTCCGAGATACTATTCTTCTCAAGGACCCATAGGCTAGAGGGAATCACAATGGAGAATGTAGTACAGTTTAGAATTTGGGTTAGATGGGTACACATAATAAGACAAAGTAGAAAACTTTATGCCATTATATTTTTCAGAAGGGCTAATGTTCTGGCAGCAAAATATTCTAGAGAACGCATATCTATTTTTTCTGGTTCTAAGTCCTCCTAACTCCTATGCACATAGTATTTGAAAATGAGTTGGGAGGCAGTTTAAGAACTCTTCCAGTTTCCATTCGCTTTAAACCAAATCATATGACTGTACTAACACAATCAATTCAGTATTTTCAGAATGCGGAGATGAAAGGTTCGAAGCAGCCTAGAAGATCCATGGACGAAAATACTAATATGATAAGTAGTTTTCATCGTACATATGGAGTGTATGTTAAACTAAAGAAAAACTCCTACATGGTTCGTGGGACAAAAATGATGATACTAGTGAATTACAACTTAAATATGTGGCCAATATCATGATCATCTCAGAAAGTGAGATCAGTGTGCCCACAAAGAAATAATTCATCTTCATATACACACACACACTGTAGTCTGAAGTTGATCCTACAATTGCAGCTGGCTGGTCATCACAGCGAGAACTGGAATCAAATAATTGAAATGCCGACGTATCACAGAAAAAGATAAGCCATTCTCTCTCGTCCTATCAGATAAAAGCTGGAACGTAACAGTGTGATATTTTTCTGCAGGTCCAAATAACAAAACAACGTGATACACACAAGTGGAAGGTTTTCCATTATCTAAAAAAGCGCACACAAAATGGGAGATACGATGCCAAAGTAAAGAGAGCAAATGTCGTGTCTTCCACTATGAGCAAAGAACCCTTGCAACCTGCAGATAGAAACGAATAAAGCTACGATAAAAATTGTCACTTAAATAGATATACACTCATTTCATACATGTCACCTAAAAAGTCATGATTTTTTTTAAAAAAAATTAGCAAGATAGATCAATATATATTATTTCAATTTTTAAAGTTAAAA ] [+] EMBL CB646477 [ CTGGTCCT TCAGCGAGAACTGGAATCAAATAATTGAAATGCCGACGTATCACAGAAAAAGATAAGCCATTCTCTCTCGTCCTATCAGATAAAAGCTGGAACGTAACAGTGTGATATTTTTCTGCAGGTCCAAATAACAAAACAACGTGATACACACAAGTGGAAGGTTTTCCATTATCTAAAAAAGCGCACACAAAATGGGAGATACGATGCCAAAGTAAAGAGAGCAAATGTCGTGTCTTCCACTATGAGCAAAGAACCCTTGCAACCTGCAGATAGAAACGAATAAAGCTACGATAAAAATTGTCACTTAAATAGATATACACTCATTTCATACATGTCACCTAAAAAGTCATGATTTTTTTTAAAAAAAATTAGCAAGATAGATCAATATATATTATTTCAATTTTTAAAGTTAAAATTCAACCTACACAAGTAGAAAAAAAAAACTATCAAAAGTGCATACTATTACAATTAATATTTGTTACTTAATTATTTATTTATATGAGTCAAATTTGAAGTTACATGTTTGTAGAATAATATATCATATAGTATTGAGTTATCTTACTAATTTTTCAGGTGATGTGTATGAAACAAGTGTATGTACATTCGAGTGACAAAAACCACATCCTAATGCAACGATGTGAACATCCAAGGGCAGTATAAAAGGAGGTGCAGCTGCGAGGCATTGACCTGCACTCCCTTCCTCCTAGCTCGAAGTGAGCAAT CACTC ] [-] EMBL CB646478 [ TGAACATCCAAGGGCAGTATAAAAGGAGGTGCAGCTGCGAGGCATTGACCTGCACTCCCTTCCTCCTAGCTGGAAGTGAGCAAT CACTCTTGTGAAACTTTTGCAGACGCCAGCCATGGCGATCAGGGGCAT CCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAACTGGCTGAAGCAGTTCGACACCGACAACGACG GCCGGATAAGCCGGGGCGAGCTCCGGGAGGCCATCCGCCGCCGCGGCGGCTG GTTTTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGCCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCCCAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACTGGCAGCAATAAGCATTATTAAGCTAGTTTCATGGATTTTCATATGC TTGAGCTTAAAATGGGTAGAGAGCA CT GTGGCAGTAGTGCTAGCTTTT GATTAAGCTATAAAAATATTGCCTTCTATGTTGC TTTTCTTTGCTGTGTGGT AGTAACTGGTAAAGTTTGAC TTGCATGCCAGCTTCTCCTGAATAATTTGTGTAAAAGC AGGAGAAGGTCTGCCATGATGC TGTGATACTTTGAGTGATCCTCTGTTGGTATTGACTCTGGTGAAGATGAAAATGAAGGGGTGATTATGGCCATTTTAGTAAAAAAAAAAACTTAAAAAG] [+] EMBL AK120482 [ TTCCTCCTAGCTCGAAGTGAGCAAT CACTCTTGTGAAACTTTTGCAGACGCCAGCCATGGCGATCAGGGGCAT CCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAACTGGCTGAAGCAGTTCGACACCGACAACGACG GCCGGATAAGCCGGGGCGAGCTCCGGGAGGCCATCCGCCGCCGCGGCGGCTG GTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGCCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCCCAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACTGGCAGCAATAAGCATTATTAAGCTAGTTTCATGGATTTTCATATGC TTGAGCTTAAAATGGGTAGAGAGCA CT GTGGCAGTAGTGCTAGCTTTT GATTAAGCTATAAAAATATTGCCTTCTATGTTGC TTTTCTTTGCTGTGTGGT AGTAACTGGTAAAGTTTGAC TTGCATGCCAGCTTCTCCTGAATAATTTGTGTAAAAGC AGGAGAATGTCTGCCATGATGC TGTGATACTTTGAGTGATCCTCTGTTGGTATTGACTCTGGTGAAGATGAAAATGAATTGGTGATTATGG ] [+] EMBL AU101288 [ AAGTGAGCAATCCACTCTTGTGAANCTTTTGCAGACGCCAGCCATGGCGATCAGGGGCATCCCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAACTGGCTGAAGCAGTTCGACACCGACAACGACG GCCGGATAAGCCGGGGCGAGCTCCGGGAGGCCATCCGCCGCCGCGGCGGCTG GTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGCCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCCCAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACTGGCAGCAATAAGCATTATTAAGCTAGTTTCATGGATTTTCATATGC TTGAGCTTAAAATGGGTAGAGAGCA CT GTGGCAGTAGTGCTAGCTTTT GATTAAGCTATAAAAATATTGCCTTCTATGTTGC TTTTCTTTGCTGTGTGGT AGTAACTGGTAAAGTTTGAC TTGCATGCCAGCTTCTCCTGAATAATTTGTGTAAAAGC AGGAGAATGTCTGCCATGATGC TGTGATACTTTGAGTGATCCTCTGTTGGTATTGACTCTGGTGAAGATGAAAATGAATTGGTGATTATGGCCATTTTAGTAAAAAAAAAAA ] [+] EMBL C73492 [ AGCAAT CACTCTTGTGAAACTTTTGCAGACGCCAGCCATGG GATCAGGGGCAT CCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAACTGGCTGAAGCAGTTCGACACCGACAACGACG GCCGGATAAGCCGGGGCGAGCTCCGGGAGGCCATCCGCCGCCGCGGC GCTGNGTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGNCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGTCCAGAAAACTCTGGGCATGAAGGTTACTGNCTGGTAGAACTGAACACTACTGGCAGCAATAAGCATTATTAAGCTAGTTTCATGGATTTTCATATGCTTTGAGCTTAAAATGGG AGAGAGCA CTNTTGGCAGTAGTGCTAGCTTTTGGATTAAG TAT AAAATAT ] [+] EMBL BE230488 [ GACG ACCCATGGTTAATAAGGGCAT ACCGTCCTCATTCGAGATGACCGTGGACGACTTCAGGAACTGGCTGAAGCAGTTCTACACCGACAACGACG GCCGGATAAGCCGGGGCGAGCTCCGGGAGGCCATCCGCCGCCGCGGCGGNTG GTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGCCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCCCAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACTGGCAGCAATAAGCATAATTAAGCTAGTTTCATGGATTTTCATATGC TTGAGCTTAAAATGGGTAGAGAGCA CT GTGGCAGTAGTGCTAGCTTTT GATTAAGCTATAAAAATATTGCCTTCTATGTTGCTTTTTCTTTGCTGTGTGGTAAGTAACTGGTAAAGTTTGAC TTGCATGCTAGCTTCTCCTGAATAATTTGTGTAAAAGCAAGGAGAATGTCTGCCATGATGCTTGTGATACTTTGAGTG ] [-] EMBL BU673638 [ TCAGGGGCAT CCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAACTGGCTGAAGCAGTTCGACACCGACAACGACG GCCGGATAAGCCGGGGCGAGCTCCGGGAGGCCATCCGCCGCCGCGGCGGCTG GTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGCCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCCCAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACTGGCAGCAATAAGCATAATTAAGCTAGTTTCATGGATTTTCATATGC TTGAGCTTAAAATGGGTAGAGAGCA CT GTGGCAGTAGTGCTAGCTTTT GATTAAGCTATAAAAATATTGCCTTCTATGTTGC TTTTCTTTGCTGTGTGGT AGTAACTGGTAAAGTTTGAC TTGCATGCTAGCTTCTCCT ] [+] EMBL BQ908070 [ AT CCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAACTGGCTGAAGCAGTTCGACACCGACAACGACG GCCGGATAAGCCGGGGCGAGCTCCGGGAGGCCATCCGCCGCCGCGGCGGCTG GTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGCCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCCCAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACTGGCAGCAATAAGCATAATTAAGCTAGTTTCATGGATTTTCATATGC TTGAGCTTAAAATGGGTAGAGAGCACCT GTGGCAGTAGTGCTAGCTTTT GATTAAGCTATAAAAATATTGCCTTCTATGTTGC TTTTCTTTGCTGTGTGGT AGTAACTGGTAAAGTTTGAC TTGCATGCTAGCTTCTCCTGAATAATTTGTGTAAAAGC AGGAGAATGTCTGCCATGATGC TGTGATACTTTGAGTGATCCTCTGTTGGTATTGACTCTGGTGAAGATGAAAATGAATTGGTGATTATGGCCATTTTAGTAAAAA ] [+] EMBL BI808439 [ catACGCGCCGGATAAACC GGGCGAGCTCCGGGAGCCCATCCGCC CCGCGGCGGCTG GTTCTCCGGCCTGAAAGCCGGCCGCACCGTCCGCCACGCCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCCCAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACT GCA CAATAAGCATAATTAAGCTAGTTTCATGGATTTTCATATGC TTGAGCTTAAAATGGGTAGAGAGCACCT GT GCAGTAGTGCTAGCTTTT GATTAAGCTATAAAAATATTGCCTTCTATGTTGC TTTTCTTTCCTGTGTGGT AGTAACTGGTAAAGTTTGACATTGCATGCTAGCTTCTCCTGAATAATTTGTGTAAAAGC AGGAGAATGTCTGCCATGATGC TGTGATACTTTGAGTGATCCTCTGTTGGTATTGACTCTGGTGAAGATGAAAATGAATTGGTGATTATGGCCATTTTAGTAACACCAAAAA ] consensusID : consensus_13116#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 215 fasta sequence [CGAGGACACTGACAGGACTGAAGGAGTAGAAACTGGAGCACTGTGGCAGTAGTGCTAGCTTTTGATTAAGCTATAAAAATATTGCCTTCTATGTTGCTTTTCTTTGCTGTGTGGTAGTAACTGGTAAAGTTTGACTTGCATGCCAGCTTCTCCTGAATAATTTGTGTGAAAGCAGGAGAATGTCTAANAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF329776 [CGAGGACACTGACAGGACTGAAGGAGTAGAAACTGGAGCACTGTGGCAGTAGTGCTAGCTTTTGATTAAGCTATAAAAATATTGCCTTCTATGTTGCTTTTCTTTGCTGTGTGGTAGTAACTGGTAAAGTTTGACTTGCATGCCAGCTTCTCCTGAATAATTTGTGTGAAAGCAGGAGAATGTCTAANAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13116#0 TCCAACCAGGGGCTGTTTTGCAAATCCATTTCGCCTCACCGGAGATGAGATCCCATCGAC 60 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 GCGACGCCGCCGCCTCCTTCCTCCTCCTCTCGTCGGAGCCACCGCCGGGAGGGATTCATC 120 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 GCGAGCGGCGGCTGAATTGGAACAGGTGAAACCAATGCAGCCGCACCCGCAGCCAGTGAG 180 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 GAGATCGTCGTCTCCGGCCTCCGGGAATAGCAGTTTTTGATCGAAGACGCTTATGAAGGT 240 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AATTTATTAACGGTGTTTGTGCATTTGTGGAATTGTGGATAGCTATTCTGATTTTCATGC 300 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TCTCTTGCTATTTACTATAGCCTTAACAGAGAAAATTATAGGTCATAATCAAGGTGCTTA 360 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AATACTGTCTAACTACTTCATGTAGTAACCAAGTGAACACCATGTTTGATTCGATAACTA 420 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 CATTAAATACAAACCAAAAAAGTTACTAGCAAGGCACATCTATTTAGCTAGTAAAGACAA 480 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 ACCCCTAACAACCAATAGATAGAATGGTTAACCTTTTTTATTCCTCTCGAAACCCTTACA 540 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 GCCAACAGATAGAAATATAAAATGGTGGTTTCCTGACAAAGTTCTAGGGACAGCAACAGA 600 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 ACAAGTGGATGAGAACACAGATAATTGTGTGCGCCTGCGTTGCTCGATTACTCGAAGCAG 660 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 CCAGTGTGGTAAGAATCCCAATCCTGTCTCCTCTGTGGGCTGGTCAGTCAATGAAGAATG 720 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AAGAATCTGCTTCATGCCTACCAAGTACCAAATGCTATCCTCGCACGTGCATTCCAAACT 780 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TTCCGAGACTCTGTTCTTCCCAAGGACCCATAGGCTAAAGAGAATCACAATGGAGTATGT 840 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AGTATAGTTTAGAATTTGGGTTGGATGGATGGGTGTACACCGTGCACCTAGTAAGACAAA 900 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 GTAGCAAACTTTGCGCCATTATATTTTTCAGAATGAAACACATGGTTCGTTGTGCCATTA 960 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TATATATACTGTTATTTTTTCTGATCCTAACTCCTATCTACGCTTTTGAAATGAGTTGGG 1020 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AAAAGCAATTTAAGAACTCTTCCAGCTTCCATTCACTTGCAAATTGAAACCAAATCATAT 1080 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 GGTTCTGCTCCTCGAACAATCAGTTAAGATTGCAGACAAAACCAATTACCAAAGGCTCAA 1140 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AGCTGCCCTGAAGGTAGGCCCGATCTATGGATGAAAACAGTAATACGATAAGTACTCCTT 1200 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TTCTGAAGTGAGATCAGTGTGCGTACAAAGAAATAAATCATCCAACAGCCAACAGATAGA 1260 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 ATGGTTAGCCTTTTTATTCCTCTCAAACCCTTACAGCCAACAGATAGAATAGTAAGCCTC 1320 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TTTGTCCTTCTCAAACTGTAAGACGGTGGCTTCCTGCCGAAGTTCCATGGACAGCAACGG 1380 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AACAAGCGGATAATAAAACAGACAATTGTGTGTACTTGTGCTGCTCGATCACTCGAAGTA 1440 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 GCCAGTGTGGTAAGAATCTCATCCTGTTTCCTCCGTGGGCTGGTCAGTCACTGAAGAATG 1500 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AAGAATCTGCTTCATGCCTACCAAGTACCAAATGCTATCCTCGCACGTGCTTTCCAAACT 1560 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TTCCGAGATACTATTCTTCTCAAGGACCCATAGGCTAGAGGGAATCACAATGGAGAATGT 1620 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AGTACAGTTTAGAATTTGGGTTAGATGGGTACACATAATAAGACAAAGTAGAAAACTTTA 1680 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TGCCATTATATTTTTCAGAAGGGCTAATGTTCTGGCAGCAAAATATTCTAGAGAACGCAT 1740 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 ATCTATTTTTTCTGGTTCTAAGTCCTCCTAACTCCTATGCACATAGTATTTGAAAATGAG 1800 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TTGGGAGGCAGTTTAAGAACTCTTCCAGTTTCCATTCGCTTTAAACCAAATCATATGACT 1860 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 GTACTAACACAATCAATTCAGTATTTTCAGAATGCGGAGATGAAAGGTTCGAAGCAGCCT 1920 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AGAAGATCCATGGACGAAAATACTAATATGATAAGTAGTTTTCATCGTACATATGGAGTG 1980 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TATGTTAAACTAAAGAAAAACTCCTACATGGTTCGTGGGACAAAAATGATGATACTAGTG 2040 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AATTACAACTTAAATATGTGGCCAATATCATGATCATCTCAGAAAGTGAGATCAGTGTGC 2100 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 CCACAAAGAAATAATTCATCTTCATATACACACACACACTGTAGTCTGAAGTTGATCCTA 2160 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 CAATTGCAGCTGGCTGGTCATCACAGCGAGAACTGGAATCAAATAATTGAAATGCCGACG 2220 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TATCACAGAAAAAGATAAGCCATTCTCTCTCGTCCTATCAGATAAAAGCTGGAACGTAAC 2280 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AGTGTGATATTTTTCTGCAGGTCCAAATAACAAAACAACGTGATACACACAAGTGGAAGG 2340 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TTTTCCATTATCTAAAAAAGCGCACACAAAATGGGAGATACGATGCCAAAGTAAAGAGAG 2400 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 CAAATGTCGTGTCTTCCACTATGAGCAAAGAACCCTTGCAACCTGCAGATAGAAACGAAT 2460 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AAAGCTACGATAAAAATTGTCACTTAAATAGATATACACTCATTTCATACATGTCACCTA 2520 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 AAAAGTCATGATTTTTTTTAAAAAAAATTAGCAAGATAGATCAATATATATTATTTCAAT 2580 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TTTTAAAGTTAAAATTCAACCTACACAAGTAGAAAAAAAAAACTATCAAAAGTGCATACT 2640 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 ATTACAATTAATATTTGTTACTTAATTATTTATTTATATGAGTCAAATTTGAAGTTACAT 2700 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 GTTTGTAGAATAATATATCATATAGTATTGAGTTATCTTACTAATTTTTCAGGTGATGTG 2760 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TATGAAACAAGTGTATGTACATTCGAGTGACAAAAACCACATCCTAATGCAACGATGTGA 2820 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 ACATCCAAGGGCAGTATAAAAGGAGGTGCAGCTGCGAGGCATTGACCTGCACTCCCTTCC 2880 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TCCTAGCTCGAAGTGAGCAATCACTCTTGTGAAACTTTTGCAGACGCCAGCCATGGCGAT 2940 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 CAGGGGCATCCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAACTGGCTGAAGCA 3000 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 GTTCGACACCGACAACGACGGCCGGATAAGCCGGGGCGAGCTCCGGGAGGCCATCCGCCG 3060 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 CCGCGGCGGCTGGTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGCCGACAGGGA 3120 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 CAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCCCAGAAAAC 3180 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACTGGCAGCAATAAGCATTAT 3240 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TAAGCTAGTTTCATGGATTTTCATATGCTTGAGCTTAAAATGGGTAG-AGAGCACTGTGG 3299 consensus_13116#1 -----------CGAGGACACTGACAGGACTGAA---GGAGTAGAAACTGGAGCACTGTGG 46 * *** * * * * *** * * * * *********** consensus_13116#0 CAGTAGTGCTAGCTTTTGATTAAGCTATAAAAATATTGCCTTCTATGTTGCTTTTCTTTG 3359 consensus_13116#1 CAGTAGTGCTAGCTTTTGATTAAGCTATAAAAATATTGCCTTCTATGTTGCTTTTCTTTG 106 ************************************************************ consensus_13116#0 CTGTGTGGTAGTAACTGGTAAAGTTTGACTTGCATGCCAGCTTCTCCTGAATAATTTGTG 3419 consensus_13116#1 CTGTGTGGTAGTAACTGGTAAAGTTTGACTTGCATGCCAGCTTCTCCTGAATAATTTGTG 166 ************************************************************ consensus_13116#0 TAAAAGCAGGAGAATGTCTGCCATGATGCTGTGATACTTTGAGTGATCCTCTGTTGGTAT 3479 consensus_13116#1 TGAAAGCAGGAGAATGTCTAANAAAAAAAAAAAAAAAAAAAAAAAAAAA----------- 215 * ***************** * * * * * * consensus_13116#0 TGACTCTGGTGAAGATGAAAATGAATTGGTGATTATGGCCATTTTAGTAAAAAAAAAAAC 3539 consensus_13116#1 ------------------------------------------------------------ consensus_13116#0 TTAAAAAG 3547 consensus_13116#1 -------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||