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Oryza sativa
cluster # 13137 cluster # 13137       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13137#0 length = 1404 sequences # 10  
consensus_13137#1 length = 589 sequences # 2  

consensusID : consensus_13137#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1404
fasta sequence
                              [ACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG-AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC-TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT--CCC-GGGAAGA-CTTGACC-GTC-AT-CCCCAA-GTTCGCCTACC-GC-AC-CTACGCCGGGCAGG-TGAGGCAGCAGGGGGAGCACGAGAGCC-TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG-TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC-AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA-CGGCGGGCCA-CCTGTTCCCCATCA-CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTATGCCTCGTTTCATCTNCC]

[+] EMBL AK099017             [ACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT  CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATT                                ]
[+] EMBL AK061527             [ CCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT  CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTTTGCCT             ]
[+] EMBL AK119210             [ CCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT  CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTtt                 ]
[+] EMBL AK104452             [ CCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT  CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGT                       ]
[+] EMBL CB649885             [                ATTCCCCTCCACCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCACCCCCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB669158             [                                             ACCTCCTCTCTCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTTCACCCCGCCATCCTCT  CCC GGGAAGA CTTGACC GTC AT CCCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB669159             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGG AACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT  CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTAGGCCTCGTTTCATCTNCC]
[-] EMBL CB649886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGGAAACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCGTATTGGTGGAACACCCAGAAGCTCTTCCCGGCC TCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT  CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCC TGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGC AGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCGGATATAGAGAAATGACAATAATATTTTGCGGAG                        ]
[+] EMBL BI812288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACACCCAGAAGCTCTTCCCGCCCATCCAGCGTCATCTCCTTCAACCCCGCCATCCTCT  CCC GGGAAGA CTTGACC GTC AT CCCCAA GTTCGCCTACC GC AC CTACGCCGGGCAGG TGAGGCAGCAGGGGGAGCACGAGAGCCGTGCACCGGGACATGCTGGTGGGGTTCGGGAAATGGGGG TGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGCAAGCTGTC CGGCACATCGCGCAGCGGCTCCCGTGGGT CGGTACCACGAGCTGCCCA CGGCGGGCCA CCTGTTCCCCATCA CCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCAaaaaaa               ]
[+] EMBL BI806429             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                acCCCCGCCATCCTCTTCCCCGGGGAAGACCTTGACCGGTCAATCCCCCAAGGTTCGCCTACCGGCAACACTACGCC GGCAGGTTGA GCA CA GGGGAGCACGAGACCC T CACCGGGACAT CTGTTGGGTTTCGGAAATTGGGGGTTGGAGCCCCCTGGAGATGGAGAACCCGTTCCCGGCGGGCGA GC GCGGTGCACCTGT GCACGGCGCGGAGGACCTCATCGTGCCCGT C AGCTGTCGCGGCACATCGCGCAGCGGCT CCGTGGGTGCGGTACCACGAGCTGCCCACCGGC GGCCANCCTGTTCCCCATCACCCGAAGGGAT CCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGAC ATAATATTTTGCGGAGTCAaaaaaaa              ]


>consensus_13137#0 ACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGG GACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGG CAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCC GCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTTGTGTTATT GCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGG AGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCA CGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGA CTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTA CATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGA GGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTT CTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCC TCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGGAACTACTGGTGGTCGGGTTA CCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGT CCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCC GGCCTCCAGCGTCATCTCCTTCAACCCCGCCATCCTCTCCCGGGAAGACTTGACCGTCAT CCCCAAGTTCGCCTACCGCACCTACGCCGGGCAGGTGAGGCAGCAGGGGGAGCACGAGAG CCTGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGGTGGAGCCCGCTGGAGATGGA GAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCAT CGTGCCCGTGCAGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGA GCTGCCCACGGCGGGCCACCTGTTCCCCATCACCGAAGGGATGCCGGACCTCATCGTCAG GTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTC TGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCG TAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAG TCATTATGCCTCGTTTCATCTNCC



consensusID : consensus_13137#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 589
fasta sequence
                              [AGTAGTAAAAAAAGGGATAGTACTCGTAACTCGCGAAGGCGATAGGAGGGTGCGCATGCGCGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGACACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTCGTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGTCCATCGCCTTTTTGCTTTGTTAATTTCTCGTGTTCAACGCAGCGTTTGTTTCGTAGTACGTCGTCGTAGCCTGTTCGTGATTTGCCACCGCTCCCTGTTTTTACAATTTTGCTGTATAATCAGCTCGGTTGCGGTCTCGATCTCAAGATTGACACTATCTCACATAAAT]

[-] EMBL CF313333             [AGTAGTAAAAAAAGGGATAGTACTCGTAACTCGCGAAGGCGATAGGAGGGTGCGCATGCGCGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGACACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTCGTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGTCCATCGCCTT                                                                                                                                                               ]
[+] EMBL AK107958             [                                                GGTGCGCATGCGCGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGACACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTCGTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGCCCATCGCCTTTTTGCTTTGTTAATTTCTCGTGTTCAACGCAGCGTTTGTTTCGTAGTACGTCGTCGTAGCCTGTTCGTGATTTGCCACCGCTCCCTGTTTTTACAATTTTGCTGTATAATCAGCTCGGTTGCGGTCTCGATCTCAAGATTGACACTATCTCACATAAAT]


>consensus_13137#1 AGTAGTAAAAAAAGGGATAGTACTCGTAACTCGCGAAGGCGATAGGAGGGTGCGCATGCG CGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGA CACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCT CCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCA CCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGG CGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTC GTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGT CCATCGCCTTTTTGCTTTGTTAATTTCTCGTGTTCAACGCAGCGTTTGTTTCGTAGTACG TCGTCGTAGCCTGTTCGTGATTTGCCACCGCTCCCTGTTTTTACAATTTTGCTGTATAAT CAGCTCGGTTGCGGTCTCGATCTCAAGATTGACACTATCTCACATAAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13137#0      ------------------------------------------------------------
consensus_13137#1      AGTAGTAAAAAAAGGGATAGTACTCGTAACTCGCGAAGGCGATAGGAGGGTGCGCATGCG 60
                                                                                   

consensus_13137#0      ------------------------------------------------------------
consensus_13137#1      CGGCTGGTGGCGAGCCGAGCCGGCACCCGGCAGATCGGGCGCGCCTCACGTCTATATAGA 120
                                                                                   

consensus_13137#0      ---------------------------------ACCCTCGCGCACTCCCATTCCCATCCT 27
consensus_13137#1      CACTCACGGGGGCCGCGTCGTCTCCATGCCCTCACCCTCGCGCACTCCCATTCCCATCCT 180
                                                        ***************************

consensus_13137#0      CCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCA 87
consensus_13137#1      CCACATCCCGCGCCATCGACCTCCTCTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCA 240
                       ************************************************************

consensus_13137#0      CCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGG 147
consensus_13137#1      CCTCCAGTAGCAAGTATCAATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGG 300
                       ************************************************************

consensus_13137#0      CGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTC 207
consensus_13137#1      CGCCGAGAAGAAGGCGTCGCCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTCGTC 360
                       ********************************************************  **

consensus_13137#0      ---CAAGAATGTCCCCCTCCTCGTGTTTGTGTTATTGCTGGGGCTGCTG--TACCGGCAG 262
consensus_13137#1      GTTCGTTCGTCCTCTCCCCTCCCTCCTTCTAGGAACACGCGTGCTGCGGCCTGCGTGCGT 420
                          *     *   * ** *  * *  ** *   *   *  * ***** *  * *  **  

consensus_13137#0      CT-TCAGCCTCCGGTTCCGAAAATCTGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCC 321
consensus_13137#1      CCATCGCCTTTTTGCTTTGTTAATTTCTCGTGTTCAACGCAGCGTTT-GTTTCGTAGTAC 479
                       *  **  * *   * *  *  *** * * *   **   *  **  *  * *     *  *

consensus_13137#0      AAGATTGCAGCTCAAGGATGGGAGGCACCTGGCCTACCACGAGTACGGCGTCCCTA-AGG 380
consensus_13137#1      GTCGTCGTAGCCTGTTCGTGATTTGCCACCGCTCC-CTGTTTTTACAATTTTGCTGTATA 538
                           * * ***       **    **  * *  *  *      ***    *  **  *  

consensus_13137#0      ATCAGGCCAAGCACAAGATCATCTTCGTCCATGGCTTCGACTCCTGCAGATACGACGCCC 440
consensus_13137#1      ATCAGCTCGGTTGCGGTCTCGATCTCAAGATTGACACTATCTCACATAAAT--------- 589
                       *****  *     *    **    **     ** *     ***    * **         

consensus_13137#0      TCCAAGTGTCACCTGAGCTCGCAGAAGAGCTGGGTGTCTACATGGTCTCGTTCGATCGTC 500
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      CTGGGTATGGAGAGAGCGACCCACACCCCGGTAGAACGGAGGACAGCATTGCGTTCGACA 560
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      TCGAAGGGCTCGCCGACGGGCTGCAGCTCGGCCCCAAGTTCTACCTCATCGGCTACTCCA 620
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      TGGGCGGGGAAATCATGTGGAGCTGCCTCAAAAACATCCCTCACAGGCTCGCGGGGGTGT 680
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      CAATCCTGGGGCCGGTGGGGAACTACTGGTGGTCGGGTTACCCGTCGAACGTGTCGACGG 740
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      AGGCGTGGTACGTGCAGCTCCCGCAGGACCAGTGGGCCGTCCGCGTGGCGCACCACGCCC 800
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      CCTGGCTCGCCTACTGGTGGAACACCCAGAAGCTCTTCCCGGCCTCCAGCGTCATCTCCT 860
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      TCAACCCCGCCATCCTCTCCCGGGAAGACTTGACCGTCATCCCCAAGTTCGCCTACCGCA 920
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      CCTACGCCGGGCAGGTGAGGCAGCAGGGGGAGCACGAGAGCCTGCACCGGGACATGCTGG 980
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      TGGGGTTCGGGAAGTGGGGGTGGAGCCCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCG 1040
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      AGGCGGCGGTGCACCTGTGGCACGGCGCGGAGGACCTCATCGTGCCCGTGCAGCTGTCGC 1100
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      GGCACATCGCGCAGCGGCTGCCGTGGGTGCGGTACCACGAGCTGCCCACGGCGGGCCACC 1160
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      TGTTCCCCATCACCGAAGGGATGCCGGACCTCATCGTCAGGTCGATGCTGCTCACCGACG 1220
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      AGTGAGATCACCGACCGACCGACCGAGACGCGCATCTCTCTGTTTTTTTTGGTTTTTGGA 1280
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      ATTTTGGGTACTGTCACGTACCGACGTACGGTGGTACGCGTAGTTGCTTGCTCCTATTAT 1340
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      CCTATCCTATATAGAGAAATGACAATAATATTTTGCGGAGTCATTATGCCTCGTTTCATC 1400
consensus_13137#1      ------------------------------------------------------------
                                                                                   

consensus_13137#0      TNCC 1404
consensus_13137#1      ----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)