cluster # 1314

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Oryza sativa
cluster # 1314 cluster # 1314 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1314#0 length = 685 sequences # 2

consensusID : consensus_1314#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 685
fasta sequence

                              [CCCTTGGACACTGACATGGACTGAATGAGTAGAAACTCAACAGCACTGCTACTGGACATACTCTACTACTACTAGCCAGTAAGCTAGCTAACTAACTACGTGGCTATGGCCCCCCTCCGTGATGGCGTCGTCGGCCACCACACGTCGCTCCCCTTCCAGGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCCGCCGCTCCCGGCACTCCAGCTTCGGCAACGTCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTGTGGGCCGATTGAGGGCATCAAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAG-TCAGCAA-GTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCCGGATACTACGACGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACCGACGCCACCCAGGTGCTCAAGGAGCTCGANNNNNCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTTNNNCNNNTGCAGCTTATCAGCTTCATCGCCTANNNNCCCCCGGGCTGNGNNNNNNCTGGTGGCAACTAAGCCGTCATCGTCATATATANNNNNNNNNNNTNNNCATCTCTGANTN]

[+] EMBL CF337621             [CCCTTGGACACTGACATGGACTGAATGAGTAGAAACTCAACAGCACTGCTACTGGACATACTCTACTACTACTAGCCAGTAAGCTAGCTAACTAACTACGTGGCTATGGCCCCCCTCCGTGATGGCGTCGTCGGCCACCACACGTCGCTCCCCTTCCAGGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCCGCCGCTCCCGGCACTCCAGCTTCGGCAACGTCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTGTGGGCCGATTGAGGGCATCAAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAG TCAGCAA GTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCCGGATA                                                                                                                                                                                                                                                              ]
[+] EMBL CF195992             [                                                                                                                                                                                                                                                                                                                   CCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTTGTCTACCGTGAGAACCACAGGT CCCCTGGATACTACGACGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACCGACGCCACCCAGGTGCTCAAGGAGCTCGANNNNNCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTTNNNCNNNTGCAGCTTATCAGCTTCATCGCCTANNNNCCCCCGGGCTGNGNNNNNNCTGGTGGCAACTAAGCCGTCATCGTCATATATANNNNNNNNNNNTNNNCATCTCTGANTN]




>consensus_1314#0
CCCTTGGACACTGACATGGACTGAATGAGTAGAAACTCAACAGCACTGCTACTGGACATA
CTCTACTACTACTAGCCAGTAAGCTAGCTAACTAACTACGTGGCTATGGCCCCCCTCCGT
GATGGCGTCGTCGGCCACCACACGTCGCTCCCCTTCCAGGGGGCTCAAGTCCACCGCCGG
CATGCCCGTCGCCCCGCCGCTCCCGGCACTCCAGCTTCGGCAACGTCAGCAATGGCGGCA
GGATCAGGTGCATGCAGGTGTGGGCCGATTGAGGGCATCAAAGAAGTTCGAGACCCTCTC
CTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTC
CAAGTGGGTGCCCTGCCTCGAGTCAGCAAGTCGGATTCGTCTACCGTGAGAACCACAGAT
CCCCCCGGATACTACGACGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGC
ACCGACGCCACCCAGGTGCTCAAGGAGCTCGANNNNNCCAAGAAGGCGTACCCTGATGCA
TTCGTCCGTATCATCGGCTTCGACAACGTTNNNCNNNTGCAGCTTATCAGCTTCATCGCC
TANNNNCCCCCGGGCTGNGNNNNNNCTGGTGGCAACTAAGCCGTCATCGTCATATATANN
NNNNNNNNNTNNNCATCTCTGANTN

clustalw multiple alignements is not computed in this case