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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13162#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1856 fasta sequence
[TTCCAATTCTATTCTAACCCATTTATAAGCTCCTTCATTGGAGGTTAGCCCAAGGGTCAGTGTTGCTTGAGAGGTACTCACCCTGTGCAGGTGCCAGTGGACTCAGGCCATTTAGCTAGCTAGCCAAAGCCAATTGCCATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAGAGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCACCAGCAGCAGGTGAGGCCGGCTGCCACAAGCCACAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTGGGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCCCTCCTCTTCGACCGCGGCCAGGATGCTCAGGCGCAACTCGCCGTCGAGCAGCATCAGCACCAAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTCGCGGCCACTTTACTCCGGCTTGAAGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTACCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGACGATGAAAGTCATGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGTGGAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTTTGGAACATTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTCTTGTATGCATACATTATGCACAAATGATATATGTATAATAATGTAATCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCACAGTACTTGGCCCCCATCAATTTTTTTTTCTTTTTTGACATTTACATCATTACATTACATGTAAAGAGAAAGGGAAGAACATAAGCGCAGAAATGAAAAGGAAGAAGATAAGTTAATTTGCCTAAAAAA]
[+] EMBL AK060755 [TTCCAATTCTATTCTAACCCATTTATAAGCTCCTTCATTGGAGGTTAGCCCAAGGGTCAGTGTTGCTTGAGAGGTACTCACCCTGTGCAGGTGCCAGTGGACTCAGGCCATTTAGCTAGCTAGCCAAAGCCAATTGCCATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAGAGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCACCAGCAGCAGGTGAGGCCGGCTGCCACAAGCCACAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTGGGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCCCTCCTCTTCGACCGCGGCCAGGATGCTCAGGCGCAACTCGCCGTCGAGCAGCATCAGCACCAAGAAGTTCTGCTCAAGCAAAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTGGTAGTAGATCAGTCGTCGTTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCTTCGACGGCGAGGAGGACTGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACGCGTCGCGGCCACTCTACTCCGGCTTGAAGTGCTCCTTCATCTTCGACGAGGTGGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTACCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGATGATGAAAGTCATGTATGGTTCATTTGAGGACGGGGATGCAAAGTTAGATGAGGTGCAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATATTTGGAACACTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTCTTGTATGCATACATTATGCACAAATGATATATGTATAATAATGTAATCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCACAGTACTTGGCCCCCATCAATTTTTTTTTCTTTTTTGACATTTACATCATTACATTACATGTAAAGAGAAAGGGAAGAACATAAGCGCAGAAATGAAAAGGAAGAAGATAAG ]
[+] EMBL OSR3396A [ CCTGTGCAGGTGCCAGTGGACTCAGGCCATTTAGCTAGCTAGCCAAAGCCAATTGCCATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAGAGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCACCAGCAGCAGGTGAGGCCGGCTGCCACAAGCCACAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTGGGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCCCTCCTCTTCGACCGCGGCCAGGATGCTCAGGCGCAACTCGCCGTCGAGCAGCATCAGCACCAAG ]
[+] EMBL AK065582 [ AAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTCGCGGCCACTTTACTCCGGCTTGAAGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTAGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTATCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGACGATGAAAGTCATGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGTGGAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTTTGGAACATTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTCTGGAACGAGTTCTTGTATGCGTACCTCATGCACAAATGATATATGTATAATAATGTAACCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCACAGTACTTGGCCCCCATCAATTTTTTCT GTTTTTGACATTTACAT CATTACATGTAAAGAGAAAGGGAAGAACATAATCGCAGAAATGAAAAGGAAGAAGATAAGT ]
[+] EMBL CB679501 [ AAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTCGCGGCCACTTTACTCCGGCTTGAAGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTAGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATT ]
[+] EMBL OSR29841A [ GACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAG ]
[+] EMBL OSR20101A [ GACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCG ]
[-] EMBL CB679502 [ TGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGACGATGAAAGTCATGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGTGGAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTTTGGAACATTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTCTGGAACGAGTTCTTGTATGCGTACCTCATGCACAAATGATATATGTATAATAATGTAACCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCACAGTACTTGGCCCCCATCAATTTTTTCT GTTTTTGACATTTACAT CATTACATGTAAAGAGAAAGGGAAGAACATAATCAAGGGAATGAAAAGGAAGAAGATAAG ]
[+] EMBL AU197567 [ CGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTNTGACGAAAGAGCAGATTGCAAACCCGAGCATNTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTCTTGTATGCATACATTATGCACAAATGATATATGTATAATAATGTAATCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCNCAGTACTTGGCCCCCATCAATTTTTTTTTCTTTTTTGACATTTACATCATTACATTACATGTAAAGAGAAAGGGAAGAACATAAGCGCAGAAATGAAAAGGAAGAAGATAAGTTAATTTGCCTAAAAAA]
consensusID : consensus_13162#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 636 fasta sequence
[CCTTCTTTGCCAGGCTTCATTCACCTGCCCCTNTCCTTGGGCTACCTACTGGGAGAGNTGCGATCCAACAAGTGTCTACGACCAGAACCAATTCAGATAGAAGTNTTATAGGATCCAACCACAGGNTTCGGCATGATGACAAAGCGAAGGGAGATCCTGTGGGTACATTTGGAACCAAAGGCGCATACATGTTCAGATACTGAACATCACCCAGCTTTNCTGGAGTACCGCCAAGGACGCCCATCCAGACGATATTGCAGGAGNCAGTACGTTCCTCTGGACGAAAGAGCAGATTGGCAAACCCGAGCATCTGACGCAGACTGCACGCATNTGGGTGGCCTGCCCTGGGAGTTGCCTGGAGGTCTGGGAACGAGTTGCTTGTATGGCGTACCCTGCATGGCACAAATGGATGATGATGTGATGAATGAATGTGAACCTTGAATTGTGCCCCAATGTTGCTGTGCTGTTGGTTAACCTCTGTGGGGTGGTGCTAAGTGAGGGTATAAGTGCCCAGTACTTGGGCCCCCATCAATTTTTTCTGTTTTTGACATTTACATCATTACATGTAAAGAGAAAGGGAAGAACATAATCGCAGAAATGAAAAGGAAGAAGATAAGTTGATTTCCAAAAAAAAAA]
[+] EMBL BI806677 [CCTTCTTTGCCAGGCTTCATTCACCTGCCCCTNTCCTTGGGCTACCTACTGGGAGAGNTGCGATCCAACAAGTGTCTACGACCAGAACCAATTCAGATAGAAGTNTTATAGGATCCAACCACAGGNTTCGGCATGATGACAAAGCGAAGGGAGATCCTGTGGGTACATTTGGAACCAAAGGCGCATACATGTTCAGATACTGAACATCACCCAGCTTTNCTGGAGTACCGCCAAGGACGCCCATCCAGACGATATTGCAGGAGNCAGTACGTTCCTCTGGACGAAAGAGCAGATTGGCAAACCCGAGCATCTGACGCAGACTGCACGCATNTGGGTGGCCTGCCCTGGGAGTTGCCTGGAGGTCTGGGAACGAGTTGCTTGTATGGCGTACCCTGCATGGCACAAATGGATGATGATGTGATGAATGAATGTGAACCTTGAATTGTGCCCCAATGTTGCTGTGCTGTTGGTTAACCTCTGTGGGGTGGTGCTAAGTGAGGGTATAAGTGCCCAGTACTTGGGCCCCCATCAATTTTTTCTGTTTTTGACATTTACATCATTACATGTAAAGAGAAAGGGAAGAACATAATCGCAGAAATGAAAAGGAAGAAGATAAGTTGATTTCCAAAAAAAAAA]
consensusID : consensus_13162#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 517 fasta sequence
[AAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACNACTCGTCGCGGCCCTCTACTCCGGCTTGAAGTGCTCTTCATCTCGACGAAGTACCTGCGACAAGTATGAAGGAATGACCCCAGTCCACACTGGAGATGGCACCCCCGGTTCACCTCCAGATCATGCACAAGTTCTTAAACCTAGACAAAAATATTTTGTGGCAATTTTACACAATTAGGTTTAATGGTGATGGAACATATCTATGCCAAAACGATAACGACTCTATCCATATTATGATACAAATNTTGGTCCGTTGATCACCACCTTCTGTACTTCTTGCCGATTCCCTTCGCTTTCTTCCTTGATGTGTGTA]
[+] EMBL CA753389 [AAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCAACTGGTCGTTGGGACGGTGGGTGTACGACNACTCGTCGCGGCCCTCTACTCCGGCTTGAAGTGCTCTTCATCTCGACGAAGTACCTGCGACAAGTATGAAGGAATGACCCCAGTCCACACTGGAGATGGCACCCCCGGTTCACCTCCAGATCATGCACAAGTTCTTAAACCTAGACAAAAATATTTTGTGGCAATTTTACACAATTAGGTTTAATGGTGATGGAACATATCTATGCCAAAACGATAACGACTCTATCCATATTATGATACAAATNTTGGTCCGTTGATCACCACCTTCTGTACTTCTTGCCGATTCCCTTCGCTTTCTTCCTTGATGTGTGTA]
consensusID : consensus_13162#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 422 fasta sequence
[TCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGCCAACAACAAGTGTTTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCNCAGACTACGGCATGATGGACAAGGCGAAGGAGATATTTGGAACNCTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCNCCCAGCTTTTTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTNTGACGAAANAGCAGATTGCAAACCCGAGCATNTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTNTTGTATGCATACATTATGCCCAAATGATATATGTATAATAATGTAATNTTAATTTGGCCCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU173505 [TCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGCCAACAACAAGTGTTTAAACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCNCAGACTACGGCATGATGGACAAGGCGAAGGAGATATTTGGAACNCTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCNCCCAGCTTTTTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTNTGACGAAANAGCAGATTGCAAACCCGAGCATNTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTNTTGTATGCATACATTATGCCCAAATGATATATGTATAATAATGTAATNTTAATTTGGCCCAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_13162#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 352 fasta sequence
[AGTCCAAGCTCTTGATAATTTCCTTTGTGTCATCCTCTCTTCAAATTCCTGTACTGTTATGAAGCATCCAAAAAACACAATTGAATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTNCAATTGCGACGATAGAATTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTTCCGGATCAT]
[+] EMBL C72349 [AGTCCAAGCTCTTGATAATTTCCTTTGTGTCATCCTCTCTTCAAATTCCTGTACTGTTATGAAGCATCCAAAAAACACAATTGAATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTNCAATTGCGACGATAGAATTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTTCCGGATCAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TTCCAATTCTATTCTAACCCATTTATAAGCTCCTTCATTGGAGGTTAGCCCAAGGGTCAG 60
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TGTTGCTTGAGAGGTACTCACCCTGTGCAGGTGCCAGTGGACTCAGGCCATTTAGCTAGC 120
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TAGCCAAAGCCAATTGCCATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAG 180
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 AGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCACCAGCAGCAGGTGAGGCC 240
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 GGCTGCCACAAGCCACAGGCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTG 300
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 GGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCC 360
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 CTCCTCTTCGACCGCGGCCAGGATGCTCAGGCGCAACTCGCCGTCGAGCAGCATCAGCAC 420
consensus_13162#1 -------------------------------------------------CCTTCTTTGCC 11
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 -AAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATC---A 56
consensus_13162#4 ----------AGTCCAAGCTCTTGATAATTTC-----CTTTGTGTCATCCTCTCTT---C 42
consensus_13162#0 CAAGAAGTCCAGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATC---A 477
consensus_13162#1 AGGCTTCATTCACCTGCCCCTNTCCTTGGGCTACCTACTGGGA--GAGNTGCGATCCAAC 69
consensus_13162#3 -----TCAT-CACCTGCCC--ATTCCTGGGCTAGCAACTGGGGAGGAGATGCCAAC-AAC 51
* * * *
consensus_13162#2 GTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATC--TG 114
consensus_13162#4 AAATTCCTGTACT----GTTATGAAGCATCCAAAAAACACAATTGAATTCAATGCCACAA 98
consensus_13162#0 GTATTCGTAGATCAGTCGTCGCTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATC--TG 535
consensus_13162#1 AAGTGTCTACG---ACCAGAACCAATTCAGATAGAAGTNTTATAGGA-TCCA-ACCACAG 124
consensus_13162#3 AAGTGTTTAAACGAAACAGAACCAATTCAGATAGAAG-ATTATAGGAGTGCA-ACCNCAG 109
* * * * * * * * *
consensus_13162#2 AGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCA 174
consensus_13162#4 AGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGAA 158
consensus_13162#0 AGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCGTCGACGGCGAGGAGGAGTGCA 595
consensus_13162#1 GNTTCGGCATGATG-ACAAAGCGAAGGGAGATCCTGTGGGTACATTTGGAACCAAAGGCG 183
consensus_13162#3 ACTACGGCATGATGGACAAGGCGAAGG-AGATATTTGGAACNC---TGGAACCAAAGG-G 164
* * * * *
consensus_13162#2 ACTGGTCGTTGGGACGGTGGGTGTACGACNACTCGTC-GCGGCC-CTCTAC---TCCGGC 229
consensus_13162#4 ATCAATGGGTGT--CGATGG-TGTGCA------TGGT-GGAGCA-CTTCAT---CCCTGA 204
consensus_13162#0 ACTGGTCGTTGGGACGGTGGGTGTACGACAACTCGTC-GCGGCCACTTTAC---TCCGGC 651
consensus_13162#1 CATACATGTTCAGATACTGAACATCACCCAGCTTTNCTGGAGTACCGCCAAGGACGCCCA 243
consensus_13162#3 CATACATGTTCAGATACTGAACATCNCCCAGCTTTTT--GAGTACCGC-AAGGACGCCCA 221
* * ** * * * * *
consensus_13162#2 TTGAAGTGCTC-TTCATCT-CGACGAAGTA-CCTGCGACAAGTATG-AAGGAA-TGAC-C 283
consensus_13162#4 TGGCCGCAAGA-TGCGCGT-TTACAACGGC-TCCCTTATCTCCTTC-AAAGCA-T----T 255
consensus_13162#0 TTGAAGTGCTCCTTTATCTTCGACGAGGTAGCCTGCGACAAGTATGGAAGGAA-TGACAC 710
consensus_13162#1 TCCAGACGATATTGCAGGAGNCAGTACGTTCCTCTGGACGAAAGAGCAGATTGGCAAACC 303
consensus_13162#3 TCCA-ACGATATT-CAGGAGACAGTACGTTCCTNTG-ACGAAANAGCAGATTG-CAAACC 277
* * * * * * *
consensus_13162#2 CCAGTCC--ACACTGGAGATGGCACCCCC--GGTT-----CACCTCCAGATCA----TGC 330
consensus_13162#4 TGAGTNC--AA--TTGCGACGATAG------AATT-----CTACT---GGTCA----C-C 292
consensus_13162#0 CAAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCAC 770
consensus_13162#1 CGAGCAT--CTGACGCAGACTGCACGCATNTGGGTGGCCTGCCCTGGGAGTTG----CCT 357
consensus_13162#3 CGAGCAT--NT-ACGCAGACTGCACGCATT--GGTGCC---TCCCTGGAGTT------CC 323
** ** * * * *
consensus_13162#2 ACAAGTTCTTAAAC----------CTAGACAAAAATATTTTGTG------GCAATTTTAC 374
consensus_13162#4 ACT-GCTATTGGAA----------TCAAACAGCGACAACCCC--------ATAATTC-AC 332
consensus_13162#0 AAAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGG------GCGATTCAGT 824
consensus_13162#1 GGAGGTCTGGGAACGAGTTGC---TTGTATG-GCGTACCCTGCATGGC--ACAAATGGAT 411
consensus_13162#3 TGATGTTTGG-AACGAGTTN----TTGTATGCATACATTATGCCCAAATGATATATGTAT 378
* * *
consensus_13162#2 ACAATTAGGTTTAATGGTGATGGAACAT-ATCTATGCCAAAACGATAACGACTCTATCCA 433
consensus_13162#4 AGAGTGGAGTTCCG-GATCAT--------------------------------------- 352
consensus_13162#0 A-AACAGAAATCAATGGGTGTCGATGGT-GTGCATGGTGGAGCACTT-CATCCCTGATGG 881
consensus_13162#1 GATGATGTGATGAATGAATGTGAACCTTGAATTGTGCCCCAATGTTGCTGTGCTGTTGGT 471
consensus_13162#3 AATAATGTAAT--NTTAATTTGGCCCAAAAAAAAAAAAAAAAAAAA-------------- 422
* *
consensus_13162#2 TATTATGATACAAATNTTGGTCCGTTGA-TCACCACCTTCTGTACTTCTTGCCGATTCCC 492
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 CCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGC 941
consensus_13162#1 TAACCTCTGTGGGGTGGTGCTAAGTGAGGGTATAAGTGCCCAGTACTTGGGCCCCCATCA 531
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 TTCGCTTTCTTCCTTGATGTGTGTA----------------------------------- 517
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 GACGATAGATTTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAAT 1001
consensus_13162#1 ATTTTTTCTGTTTTTGACATTTACATCATTACATGTAAAGAGAAAGGGAAGAACATAATC 591
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TCACAGAGTGGAGTACCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTG 1061
consensus_13162#1 GCAGAAATGAAAAGGAAGAAGATAAGTTGATTTCCAAAAAAAAAA--------------- 636
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 GAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGG 1121
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TATGACGATGAAAGTCATGTATGGTTCATTTGAGGATGGGGATGCAAAGTTAGATGAGGT 1181
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 GGAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAA 1241
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGC 1301
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGAT 1361
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 AGAAGATTATAGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATCTT 1421
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TGGAACATTGGAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGA 1481
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 GTACCGCAAGGACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGA 1541
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 GCAGATTGCAAACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCC 1601
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TGATGTTTGGAACGAGTTCTTGTATGCATACATTATGCACAAATGATATATGTATAATAA 1661
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TGTAATCTTAATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATA 1721
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 AGTGCACAGTACTTGGCCCCCATCAATTTTTTTTTCTTTTTTGACATTTACATCATTACA 1781
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ------------------------------------------------------------
consensus_13162#4 ------------------------------------------------------------
consensus_13162#0 TTACATGTAAAGAGAAAGGGAAGAACATAAGCGCAGAAATGAAAAGGAAGAAGATAAGTT 1841
consensus_13162#1 ------------------------------------------------------------
consensus_13162#3 ------------------------------------------------------------
consensus_13162#2 ---------------
consensus_13162#4 ---------------
consensus_13162#0 AATTTGCCTAAAAAA 1856
consensus_13162#1 ---------------
consensus_13162#3 ---------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||