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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13166#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2492 fasta sequence
[GNCGCGTGNTCCCTCTCTCTCTCTCTCTCTCTCTCGCCTCCGCCTCATCATCCTCTCCTCTCCTCTCCTCTCCCACTACCACTCCAGCGCTGCTCCCCTCGCCGTCGTCGCTGCCCTCCCCCCGATCGATCGATCGCTCCCCCTNCCGCGCCGCCGTGGCCATGGAATCCGGCCAACCCAACTCCGCCGCCGCAGCAGATAAGACGCAGAACAGTTCTGTACCACCTGTGGAAGGTGTAGCTGGAGGAGGGACTAGTTATGGATGGGTAGATGGAGGATTACAGGCGTCGAGTTTAGGTAATGGTGCTATTGATCCTACAAAGATACACTCAGCAGATC-TTTTGCATGTCTGGTCTATGCCGAGCACAGCAAATGTT-AGCCAACAAGAAGCACCTCGACCTCTGGAACATGTTAACCTTTTGGCAGCAAGAAATGAAAGGGAAAGTTTTCAAATTGCTTTACGTCCAAAGGTATCATGGGCCACTTCTGGTATTGCGGGATCTGTGCAGGTTCAGTGCACTGATCTTTGCTCTTCCGCTGGAGACAGGTTAGTGGTTGGTCAATCTGTAACCTTGCGACGTGTGGTGCCTATGTTAGGTGTACCAGATGCTCTTGTGCCAATTGATCCACTCAATTCACAAATAAACCTGCTTCCAGGAGAGACAAGTGCAATATGGGTCTCACTAAATGTTCCTTGCGGACAACAGCCGGGTCTATATGAGGGTGAAATATTTATTAGTGCTGTGAGGGCAGAAGCAGAGTCCAGAGGAGAATCCTTGACAAAATCTGAAAGGTACCAGCTTTACAAAGAATTAAGAAATTGCATTGACATCACTGAACCCAGAGACTACTCGTCATCAGAGGAAATGGTACAAAGACTTACATCTGCTTCAACCACACTGAGGAGGATGTTAGCTCTTCCATCATTCCAGGACTGCCAAGAGAATAATGGATTAGGAGATATGATGGATGAAGATATTATGAACAATGTGGCAGTTCGTTTGAAGTTGAGCCTCACTGTTTGGGATTTTACTCTCCCACTGACACCTTCTTTACCTGCTGTTTTTGGCATATCTGAAACTGTGATTGAAGATCGGTTTTGCTTGGAGCATGGGACCAAAGGTTGGTATGATGCACTCGATCATCACTTCAGGTGGCTCCTCCAATACAGAATCAGTCCATTTTTCTGCAGATGGGGAGATAGCATGCGCATTCTAGCATACACATGCCCTTGGCCTGCTGACCATCCAAAGGCGAAAGAATATTACTCTGATCCAAGACTAGCAGCATATGCTGTACCATATGCACCTATCCTATCAAGCACTGATGCTGCGAAAAATTCCCTGCGAAGAGAGGTTGAAATCTTGAAATCAGAGGCTCATTGGTC-GAAATCTTACTTCTATTTGT-GGGATGAGCCACTGAATATGGAACAGTATGATGTAATCTGC-AGCATCTCTAATGAGTTGCGTTCATATGCATCTGATGTGCGTATTTTGACAACTTATTACTGTGGCCCAAGTGGTTCTGAACTGGCTCCTTCTACATTTGAGGCCTTTGTGAAAGTTCCAAATGTTCTACGTCCACATACGCAGATATTTTGCACAAGTGAATGGGTTCTTGGCACGAGAGAGGACTTGGTGAAGGATATTGTTGCTGAACTACGACCTGATCTTGGTGAAGAATGGTGGACATATGTGTGTATGGGGCCTTCTGATCCTCAACCAAACTGGCATCTTGGGATGCGTGGAACCCAGCACAGGGCAGTGATGTGGAGAGTGTGGAAGGAAGGTGGAA-CAGG-ATTCC-TTTATTGGGGTACCAACTGCTACGAGAAGGCTATGATTCCAAGTGCT-GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGTTTTCACGCTCACCTGTTAACACTCCATTCTACGGTATACCTATGATGCTGCCAGCGTGTGACTGCAGCACACGAACTGTATTTTATTCGTCTCGCACGGTGTCGATCCTTATTTCAGAAGGGACATTATGGTGCCCTGTCCCTTCAGAATCTGGTAGCTTTATCGCCTGATGTGGATGTCACCATGGCTATTTCAGGATCTAGCTATTATATGTTATCCTTAAAAAAAAAAA]
[+] EMBL C72540 [GNCGCGTGNTCCCTCTCTCTCTCTCTCTCTCTCTCGCCTCCGCCTCATCATCCTCTCCTCTCCTCTCCTCTCCCACTACCACTCCAGCGCTGCTCCCCTCGCCGTCGTCGCTGCCCTCCCCCCGATCGATCGATCGCTCCCCCTNCCGCGCCGCCGTGGCCATGGAATCCGGCCAACCCAACTCCGCCGCC GCAGATAAGACGCAGAACAGTTCTGTACCACCTGTGGAAGGTGTAGCTGGAGGAGGGACTAGTTATGGATGGGTAGATGGAGGATTACAGGCGTCGAGTTTAGGTAATGGTGCTATTGATCCTACANAGATACACTCAGCAGATCTTTTTGCATGTCTGGTCTATGCCGAGCACAGCAAATGTTAAGCCAACAA ]
[+] EMBL AK103439 [ CCTCCGCCTCATCATCCTCTCCTCTCCTCTCCTCTCCCACTACCACTCCAGCGCTGCTCCCCTCGCCGTCGTCGCTGCCCTCCCCCCGATCGATCGATCGCTCCCCCTCCCGCGCCGCCGTGGCCATGGAATCCGGCCAACCCAACTCCGCCGCCGCAGCAGATAAGACGCAGAACAGTTCTGTACCACCTGTGGAAGGTGTAGCTGGAGGAGGGACTAGTTATGGATGGGTAGATGGAGGATTACAGGCGTCGAGTTTAGGTAATGGTGCTATTGATCCTACAAAGATACACTCAGCAGATC TTTTGCATGTCTGGTCTATGCCGAGCACAGCAAATGTT AGCCAACAAGAAGCACCTCGACCTCTGGAACATGTTAACCTTTTGGCAGCAAGAAATGAAAGGGAAAGTTTTCAAATTGCTTTACGTCCAAAGGTATCATGGGCCACTTCTGGTATTGCGGGATCTGTGCAGGTTCAGTGCACTGATCTTTGCTCTTCCGCTGGAGACAGGTTAGTGGTTGGTCAATCTGTAACCTTGCGACGTGTGGTGCCTATGTTAGGTGTACCAGATGCTCTTGTGCCAATTGATCCACTCAATTCACAAATAAACCTGCTTCCAGGAGAGACAAGTGCAATATGGGTCTCACTAAATGTTCCTTGCGGACAACAGCCGGGTCTATATGAGGGTGAAATATTTATTAGTGCTGTGAGGGCAGAAGCAGAGTCCAGAGGAGAATCCTTGACAAAATCTGAAAGGTACCAGCTTTACAAAGAATTAAGAAATTGCATTGACATCACTGAACCCAGAGACTACTCGTCATCAGAGGAAATGGTACAAAGACTTACATCTGCTTCAACCACACTGAGGAGGATGTTAGCTCTTCCATCATTCCAGGACTGCCAAGAGAATAATGGATTAGGAGATATGATGGATGAAGATATTATGAACAATGTGGCAGTTCGTTTGAAGTTGAGCCTCACTGTTTGGGATTTTACTCTCCCACTGACACCTTCTTTACCTGCTGTTTTTGGCATATCTGAAACTGTGATTGAAGATCGGTTTTGCTTGGAGCATGGGACCAAAGGTTGGTATGATGCACTCGATCATCACTTCAGGTGGCTCCTCCAATACAGAATCAGTCCATTTTTCTGCAGATGGGGAGATAGCATGCGCATTCTAGCATACACATGCCCTTGGCCTGCTGACCATCCAAAGGCGAAAGAATATTACTCTGATCCAAGACTAGCAGCATATGCTGTACCATATGCACCTATCCTATCAAGCACTGATGCTGCGAAAAATTCCCTGCGAAGAGAGGTTGAAATCTTGAAATCAGAGGCTCATTGGTC GAAATCTTACTTCTATTTGT GGGATGAGCCACTGAATATGGAACAGTATGATGTAATCTGC AGCATCTCTAATGAGTTGCGTTCATATGCATCTGATGTGCGTATTTTGACAACTTATTACTGTGGCCCAAGTGGTTCTGAACTGGCTCCTTCTACATTTGAGGCCTTTGTGAAAGTTCCAAATGTTCTACGTCCACATACGCAGATATTTTGCACAAGTGAATGGGTTCTTGGCACGAGAGAGGACTTGGTGAAGGATATTGTTGCTGAACTACGACCTGATCTTGGTGAAGAATGGTGGACATATGTGTGTATGGGGCCTTCTGATCCTCAACCAAACTGGCATCTTGGGATGCGTGGAACCCAGCACAGGGCAGTGATGTGGAGAGTGTGGAAGGAAGGTGGAA CAGG ATTCC TTTATTGGGGTACCAACTGCTACGAGAAGGCTATGATTCCAAGTGCT GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGTTTTCACGCTCACCTGTTAACACTCCATTCTACGGTATACCTATGATGCTGCCAGCGTGTGACTGCAGCACACGAACTGTATTTTATTCGTCTCGCACGGTGTCGATCCTTATTTCAGAAGGGACATTATGGTGCCCTGTCCCTTCAGAATCTGGTAGCTTTATCGCCTGATGTGGATGTCACCATGGCTAT ]
[+] EMBL CB626677 [ CTCCGCCGCCGCAGCAGATAAGACGCAGAACAGTTCTGTACCACCTGTGGAAGGTGTAGCTGGAGGAGGGACTAGTTATGGATGGGTAGATGGAGGATTACAGGCGTCGAGTTTAGGTAATGGTGCTATTGATCCTACAAAGATACACTCAGCAGATC TTTTGCATGTCTGGTCTATGCCGAGCACAGCAAATGTT AGCCAACAAGAAGCACCTCGACCTCTGGAACATGTTAACCTTTTGGCAGCAAGAAATGAAAGGGAAAGTTTTCAAATTGCTTTACGTCCAAAGGTATCATGGGCCACTTCTGGTATTGCAGGATCTGTGCAGGTTCAGTGCACTGATCTTTGCTCTTCCGCTGGAGACAGGTTAGTGGTTGGTCAATCTGTAACCTTGCGACGTGTGGTGCCTATGTTAGGTGTACCAGATGCTCTTGTGCCAATTGATCCACTCAATTCACAAATAAACCTGCTTCCAGGAGAGACAAGTGCAATATGGGTCTCACTAAATGTTCCTTGCGGACAACAGCCGGGTCTATATGAGGGTGAAATATTTCTTAGTGCTGTGAGGGCAGAATCAGAGTCCAGAGGAGAATCCTTGACAAAATCTGAAAGGTACCAGCTTTACAAAGAATTAAGAAATTGCATTGACATCACTGAAACCAGAGACTATTCGTCATCAGAGGAAATGGTACAAAGACTTACATCTGCTTCAACCACACTGANGAGGATGTTAGCTCTTCCATCA ]
[+] EMBL CF277291 [ CACTGACACCTTCTTTACCTGCTGTTTTTGGCATATCTGAAACTGTGATTGAAGATCGGTTTTGCTTGGAGCATGGGACCAAAGGTTGGTATGATGCACTCGATCATCACTTCAGGTGGCTCCTCCAATACAGAATCAGTCCATTTTTCTGCAGATGGGGAGATAGCATGCGCATTCTAGCATACACATGCCCTTGGCCTGCTGACCATCCAAAGGCGAAAGAATATTACTCTGATCCAAGACTAGCAGCATATGCTGTACCATATGCACCTATCCTATCAAGCACTGATGCTGCGAAAAATTCCCTGCGAAGAGAGGTTGAAATCTTGAAATCAGAGGCTCATTGGTC GAAATCTTACTTCTATTTGT GGGATGAGCCACTGAATATGGAACAGTATGATGTAATCTGC AG ]
[+] EMBL C25889 [ TGATTGAAGATCGGTTTTGCTTGGAGCATGGGACCAAAGGTTGGTATGATGCACTCGATCATCACTTCAGGTGGCTCCTCCAATACAGAATCAGTCCATTTTTCTGCAGATGGGGAGATAGCATGCGCATTCTAGCATACACATGCCCTTGGCCTGCTGACCATCCAAAGGCGAAAGAATATTACTCTGATCCAAGACTAGCAGCATATGCTGTACCATATGCACCTATCCTATCAAGCACTGATGCTGCGAAAAATTCCCTGCGAAGAGAGGTTGAAATCTTGAAATCAGAGGCTCATTGGTCGGAAATCTTACTTCTATTTGTNGGGATGAGCCACTGAATATGGACCAGTATGATGTAATCTGCAAGCATCTCTAATGAGTTGCGGTCATATGCATC ]
[-] EMBL CB626678 [ CAGTATGATGTAATCTGC AGCATCTCTAATGAGTTGCGTTCATATGCATCTGATGTGCGTATTTTGACAACTTATTACTGTGGCCCAAGTGGTTCTGAACTGGCTCCTTCTACATTTGAGGCCTTTGTGAAAGTTCCAAATGTTCTACGTCCACATACGCAGATATTTTGCACAAGTGAATGGGTTCTTGGCACGAGAGAGGACTTGGTGAAGGATATTGTTGCTGAACTACGACCTGATCTTGGTGAAGAATGGTGGACATATGTGTGTATGGGCCCTTCTGATCCTCAACCAAACTGGCATCTTGGGATGCGTGGAACCCAGCACAGGGCAGTGATGTGGAGAGTGTGGAAGGAAGGTGGAA CAGG ATTCC TTTATTGGGGTACCAACTGCTACGAGAAGGCTATGATTCCAAGTGCT GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTTTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGC ]
[+] EMBL AK061656 [ TGGGGCCTTCTGATCCTCAACCAAACTGGCATCTTGGGATGCGTGGAACCCAGCACAGGGCAGTGATGTGGAGAGTGTGGAAGGAAGGTGGAA CAGG ATTCC TTTATTGGGGTACCAACTGCTACGAGAAGGCTATGATTCCAAGTGCT GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGT ]
[+] EMBL AU092157 [ GGCATCTTGGGATNCGTGGAACCCAGCACAGGGCANTGATGTGGAGAGTGTGGAAGGAAGGTGGAA CAGG ATTCC TTTATTGGGGTNCCAACTGCTACGAGAAGGCTATGATTCCAAGTGCT GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAaaaaaaaaa ]
[+] EMBL AU093993 [ GAANCAGGAATTCCTTTTATTGGGGTNCCAACTGCTACGAGAAGGCTATGATTCCAAGTGCTGGAGATTTGTTTCCGACGTGGTCTNCCTCCTGNCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGTTTTCACGCTCACCTGTTAACACTCCATTCTACGGTATACCTATGATGCTGCCAGCGTGTGACTGCAGCACACGAACTGTATTTTATTCGTCTCGCACGGTGTCGATCCTTATTTCAGAAGGGACATTATGGTGCCCTGTCCCTTCAGAATCTGGTAGCTTTATCGCCTGATGTGGATGTCACCATGGCTATTTCAGGATCTAGCTATTATATGTTATCCTTAAAAAAAAAAA]
[-] EMBL CF277290 [ TTCCAAGTGCT GAGATTTGTTTCCGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTGTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGTTTTCAaaaaaaa ]
[+] EMBL CA999149 [ CGACGTGGTCTTCCTCCTGGCGATGGGGTTCTGTTCTATCCTGGTGAAGTGTTTTCTTCATCACATGAACCGGTTGCGTCCACTAGGCTAGAGCGCATTCTCAGTGGCATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCT ]
[+] EMBL BI796060 [ ATGCAGGACATCGAATACCTGAAGCTTTATTCGTCAAGGTACGGCAGGGAGGAAGGTTTAGCTCTCCTTGAGAAGACAGGCGTTTATCTTGGCCCAGATCGTTATGCACTTGACCATGGACCAATTGATGTGATGCGTGGTGAGGTATACCGCACTTGCAGGTCTTAGGGCAGAGCTATCAACTTCTGGTGTTTCACTGTAGCATCCATCCTGTTGTTGTACATATGATTTCTCATGTACTGGGAGTTGCTAGCAGCAAATACTTATCGTTGAACCCATCAAAGCTCCGTTTTCACGCACACCTGTTAACACTCCATTCTACGGTATACCTATGATGCTGCCAGCGTGTGACTGCAGCACACGAACTGTAaaaaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||