These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13179#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1379 fasta sequence [ACTGCCAACATCTGCA---AGCAGCCAGCAGCAGCAGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTGCGACAACTTCGAGGGCCGCATCGACGGCGGCGAGGGCTACGACGACATCGACCCGTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTCTTCGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCACCCAACTCTTTTTGGACTCATCTGTATTTGTCTAAATCAAAATTTTACGTTTACTGTATTCGTTTGTATATGTCAATTTTTGTTTCTTCTAACGATGCATTCGTATATGAATTCGTATATGTGCAATATGATGTGATGCGAAATTAAAAATGTGTATTGGCACGTTTTGAATGATCATTAAAAAGA] [+] EMBL AK061144 [ACTGCCAACATCTGCA AGCAG CAGCAGCAGCAGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGTTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTGCGACAACTTCGAGGGCCGCATCGACGGCGGCGAGGGCTACGACGACATCGACCCGTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTCTTCGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCACCCAACTCTTTTTGGACTCATCTGTATTTGTCTAAATCAAAATTTTACGTTTACTGTATTCGTTTGTATATGTCAATTTTTGTTTCTTCTAACGATGCATTCGTATAT ] [+] EMBL AK072761 [ TGCCAACATCTGCAAGCAGCAGCCAGCAGCAGCAGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTGCGACAACTTCGAGGGCCGCATCGACGGCGGCGAGGGCTACGACGACATCGACCCGTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTCTTCGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCACCCAACTCTTTTTGGACTCATCTGTATTTGTCTAAATCAAAATTTTACGTTTACTGTATTCGTTTGTATATGTCAATTTTTGTTTCTTCTAACGATGCATTCGTATATGAATTCGTATATGTGCAATATGATGTGATGCGAAATTAAAAATGTGTATTGGCACGTT ] [+] EMBL AU173223 [ gCAGCAGCAGCAGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGAC ] [+] EMBL CB656029 [ GCAGCAGCAGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCT ] [+] EMBL CB653640 [ AGCAGCTCACCATCACTTGGGAGTTCGGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCGTGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGTCGCTTCCGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCCCGTCGAGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAACATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGACAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTTCGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGC ] [-] EMBL CB656030 [ ATGCTCGGCGGGCCCAGCTGGGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTGCGACAACTTCGAGGGCCGCATCGACGGCGGCGAGGGCTACGACGACATCGACCCGTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTCTTCGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCACCCAACTCTTTTTGGACTCATCTGTATTTGTCTAAATCAAAATTTTAC ] [-] EMBL CB653641 [ GTTACCAAGAACGCCACGGAGGAGCTCCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCTCGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTGCGACAACTTCGAGGGCCGTATCGACGGCGGCGAGGGCTACGACGACATCGACCCGTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAAGCGTTCTTCGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCACCCAACTCTTTTTGGACTCATCTGTATTTGTCTAAATCAAAATTTTACGTTTACTGTATTCGTTTGTATAGGTCAATTTTTGTTTCTTCTAACGATGCATTCGTATATGAATTCGTATATGTGCAATATGATGTGATGCGAAAGTAAAAATGTGTATTGGCACGTTTTGAATGATCATTAAAAAGA] [+] EMBL AU173224 [ GGAGGCCGGCGTGCCGTTCGACGAGCGGACGCCGATGAAGTTNGACATGCTCTACTACCAGGACCTGCTCTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTTTACACCCCGGGCAGCTGGGCCGGCGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTTTTNGCCGACTTCGCGAGGGCGATGGTGAAGATGGGGAACATACGCCCGGACCCTTGGACTCCGACGGAGGTCAGGATCAAGTGCTCCGTGGCCAATGGTCATTATTNATGGCCGGCCGTCATATCTCCTTTTGTTTAAGCTTTGAGTCCNCCCNACTCTTTTTGGNCTCATCTGNATTTGTTTNAATCAAAATTTTNCGTTTACTGNATTNGNTTGNATATGNCNANTTTTGTTTNTTNTAACGATGCNTTTGNATATNAAaaaaa ] consensusID : consensus_13179#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1312 fasta sequence [TCCACCACAACATCTCCTCCAATCAGCAGCAGCAGCAGCAGAGCTGATCACCATCACTTCGGAGCTTGTCAGCACAAGGCTAATTATTAAGCTAGGGCTCGATCGATCTGATCGTGATCTGATCTGATCTGACCATCAGCAGCCATGTCGTTTAGGTGTAAGGGCGGCGTCGCTTGGGTTGCTCTGCTCGTCGCTGTCGCGGCTCTCGCCTCCGCCGCTCAGGGATTTCCAAATCCCTTCGGTCACGAGGAGTTCACGGAGAGTTACTACGACGAGACGTGCCCCAACGCGCAGAGCATCGTGCGCTCGGTCATGGAGCGCCACGCCGCCGCCAACCCCCGCACGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTTGTCAACGGTTGTGATGCCTCCATCCTTCTGAACGCTACGGACTCCATGGAGAGCGAGAAGGATGCCGAGCCCAACGCCACCCTCGCCGGCTTCGACGTGATCGACGGCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCCATGCTCGGTGGGCCCAGCTGGGGCGTGCTCCTCGGCCGCAAGGACTCCCTCACCGCCAGCATAGACATGGCCAAAGAGGATCTCCCGAACCCGAAAGACAGCCTGGCCGAACTCATCAGGATGTTCAAGGAGCACGACCTCGACGAGCGTGACCTCACCGCGCTCTCCGGTGCACACACCGTCGGCATGGCACATGACTGCAAGAACTACGACGACCGCATCTACAGTCGCGTCGGCCAGGGCGGCGACAGCATCGACCCATCCTTCGCGGCGCTGCGCAGGCAGGAGTGCGAGCAGAAGCACGACAAGGCCACGGCACCGTTCGACGAGCGGACGCCAGCCAAGTTTGACAACGCCTACTACGTCGACCTGCTCGCGAGGCGGGGGCTCCTCACCTCTGACTAGGAGCTCTACACCCAGGGCTGCCAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGACGTGTTCTTCGCCGACTTCACAAGAGCGATGGTGAAGATGGGGAACATACGCCCAAAGCATTGGTGGACTCCGGCGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACACATTGTTGATGCTCATACTGTTGAGTACAACACAATTATGTTGCACTCATTTATAAGTGTGATATTTCCTTTCGATTTAATTGTGCATTAAACTGTAAGATGTATTTTTCTTTTGTACCTCAATTTTTTTATTCATTTTTTTATAATGTATGGGAGATCA] [+] EMBL AK066954 [TCCACCACAACATCTCCTCCAATCAGCAGCAGCAGCAGCAGAGCTGATCACCATCACTTCGGAGCTTGTCAGCACAAGGCTAATTATTAAGCTAGGGCTCGATCGATCTGATCGTGATCTGATCTGATCTGACCATCAGCAGCCATGTCGTTTAGGTGTAAGGGCGGCGTCGCTTGGGTTGCTCTGCTCGTCGCTGTCGCGGCTCTCGCCTCCGCCGCTCAGGGATTTCCAAATCCCTTCGGTCACGAGGAGTTCACGGAGAGTTACTACGACGAGACGTGCCCCAACGCGCAGAGCATCGTGCGCTCGGTCATGGAGCGCCACGCCGCCGCCAACCCCCGCACGGCGCCGGCCATCCTCCGCCTCTTCTTCCACGACTGCTTTGTCAACGGTTGTGATGCCTCCATCCTTCTGAACGCTACGGACTCCATGGAGAGCGAGAAGGATGCCGAGCCCAACGCCACCCTCGCCGGCTTCGACGTGATCGACGGCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCCGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCCATGCTCGGTGGGCCCAGCTGGGGCGTGCTCCTCGGCCGCAAGGACTCCCTCACCGCCAGCATAGACATGGCCAAAGAGGATCTCCCGAACCCGAAAGACAGCCTGGCCGAACTCATCAGGATGTTCAAGGAGCACGACCTCGACGAGCGTGACCTCACCGCGCTCTCCGGTGCACACACCGTCGGCATGGCACATGACTGCAAGAACTACGACGACCGCATCTACAGTCGCGTCGGCCAGGGCGGCGACAGCATCGACCCATCCTTCGCGGCGCTGCGCAGGCAGGAGTGCGAGCAGAAGCACGACAAGGCCACGGCACCGTTCGACGAGCGGACGCCAGCCAAGTTTGACAACGCCTACTACGTCGACCTGCTCGCGAGGCGGGGGCTCCTCACCTCTGACTAGGAGCTCTACACCCAGGGCTGCCAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGACGTGTTCTTCGCCGACTTCACAAGAGCGATGGTGAAGATGGGGAACATACGCCCAAAGCATTGGTGGACTCCGGCGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACACATTGTTGATGCTCATACTGTTGAGTACAACACAATTATGTTGCACTCATTTATAAGTGTGATATTTCCTTTCGATTTAATTGTGCATTAAACTGTAAGATGTATTTTTCTTTTGTACCTCAATTTTTTTATTCATTTTTTTATAATGTATGGGAGATCA] [+] EMBL OSR21402A [ CTCTTCTTCCACGACTGCTTCGTCAACGGTTGTNATGCCTCCATCCTTCTGAACGCTACGGACTCCATGGAGAGCGAGAAGGACGCCAAGCCCAACGCCTCCGTCGTCGGCTACGACGTGATCGAAGACATCAAGTCGGAACTCGAGCGCAGCTGCCCGGCCACCGTCTCCTGCGCTGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTGGGGCGTGCTCCTCGGCCGCAAGGACTCCCTCGCCGCCCGCATGGACATGGNCA ] consensusID : consensus_13179#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 436 fasta sequence [ACGCAGGCAGGAGTGCGANNAGAAGCACGGCAACGCCACGGCGCCGTTCGATGAGCGGACGCCAGCCAAGTTCGACAACGCCTACTACGTCGACTTGCTTGCGAGGCGCGGGCTCCTCACATCCGACCAGGAGCTCTACACCCAGGGGTGCGAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGATGTGTTCTTCGCCGACTTCGCGAGGGCCATGGTTAAGATGGGGAACATACGGCCGAAGCATTGGTGGACTCCGACGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACCCATTATTGATGCTCCTCTTGTTAATTATACTGTCGAGTACAACACAAATATGTTGGATACTCATTTGTAAGTGTGAAATTCCTTTCGATTTGATTGTGCAATAAACTGTAAGCTGTATTATTCTTTTATAAAAAA] [+] EMBL C20494 [ACGCAGGCAGGAGTGCGANNAGAAGCACGGCAACGCCACGGCGCCGTTCGATGAGCGGACGCCAGCCAAGTTCGACAACGCCTACTACGTCGACTTGCTTGCGAGGCGCGGGCTCCTCACATCCGACCAGGAGCTCTACACCCAGGGGTGCGAGACCGGCGACCTGGTGAAGACGTACGCCATGAACGGCGATGTGTTCTTCGCCGACTTCGCGAGGGCCATGGTTAAGATGGGGAACATACGGCCGAAGCATTGGTGGACTCCGACGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACCCATTATTGATGCTCCTCTTGTTAATTATACTGTCGAGTACAACACAAATATGTTGGATACTCATTTGTAAGTGTGAAATTCCTTTCGATTTGATTGTGCAATAAACTGTAAGCTGTATTATTCTTTTATAAAAA ] [+] EMBL AU173346 [ ACGGCAACGCCNCGGCGCCGTTCNATGAGCGGACGCCAGCCAAGTTCGNCAACGCCTACTACGTCGACTTGCTTGNGAGGCGCGGGCTCCTCACATCCGACCAGGAGCTCTACACCCAGGGGTGCGAGACCGGCGACCTGGTGAANACGTNCGCCATGAACGGNGATGTGTTTTTCGCCGNNTTCGCGAGGGCCATGGTTAAGATGGGGAACATACGGCCGAAGCATTGGTGGACTCCGACGGAGGTCAGGCTCAAGTGCTCGGTGGCCAACACCCATTATTGATGCTCCTCTTGTTAATTATACTGTCGAGTACAACACAAATATGTTGGATACTCATTTGTAAGTGTGAAATTCCTTTCGATTTGATTGTGCAATAAACTGTAAGCTGTATTATTCTTTTATAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13179#1 TCCACCACAACATCTCCTCCAATCAGCAGCAGCAGCAGCAGAGCTGATCACCATCACTTC 60 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 -ACTGCCAACATCTGCAAGCAGCCAGCAGCAGCAGCAGCTCA-CCATCACTTGGGAGTTC 58 consensus_13179#1 GGAGCTTGTCAGCA----CAAGGCTAATTATTAAGCTAGGGCTCGATCGATCTGATCGTG 116 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 GGAGCTGGTCAGCATTATCAAGCTTGAGCTGAGCTAGGTACGTAGGCGGGCTTGATCTCG 118 consensus_13179#1 ATCTGATCTGATCTGACCATCAGCAGCCATGTCGTTTAGGTGTAAGGGCGGCGTCGCTTG 176 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 TGGTTGACACACGAGCTCATCGTCAGCCATGGCGTTTAGCTCTAGGGCCGTCGTCGCCGT 178 consensus_13179#1 GGTTGCTCTGCTCGTCGCTGTCGCGGCTCTCGCCTCCGCCGCTCAGGGATTTCCAAATCC 236 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 CGCTTCGGTTGCTCTGCTCGTCGCGGCTCTGGCCTCCACCGCCGCAGCCGAGGGCAATCC 238 consensus_13179#1 CTTCGGTCACGAGGAGTTCACGGAGAGTTACTACGACGAGACGTGCCCCAACGCGCAGAG 296 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 CGTCG---------AGTACACGGAGAGTTACTACGATAACACGTGCCCCAACGCGCAGAA 289 consensus_13179#1 CATCGTGCGCTCGGTCATGGAGCGCCACGCCGCCGCCAACCCCCGCACGGCGCCGGCCAT 356 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 CATCGTGCGATCGGTGATGGAGCGGAGCGTCGCCGCCAACCCGAGGATGGCGCCGGCCAT 349 consensus_13179#1 CCTCCGCCTCTTCTTCCACGACTGCTTTGTCAACGGTTGTGATGCCTCCATCCTTCTGAA 416 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 CCTCCGCCTCTTCTTCCACGACTGCTTCGTCAATGGTTGTGATGGCTCCCTCCTCCTGGA 409 consensus_13179#1 CGCTACGGACTCCATGGAGAGCGAGAAGGATGCCGAGCCCAACGCCACCCTCGCCGGCTT 476 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 CAGTACGGATTCCACGGAGAGCGAGAAGGAGGAAAAAGCCAACGCCTCCCTCGCCGGCTT 469 consensus_13179#1 CGACGTGATCGACGGCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTG 536 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 CGACGTGATCGACGCCATCAAGTCCGAGCTCGAGCGCAGCTGCCCGGCCACCGTCTCCTG 529 consensus_13179#1 CGCCGATGTTCTCGCGCTCGCCGCCCGCGACGCCGTCGCCATGCTCGGTGGGCCCAGCTG 596 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 CGCCGACGTCCTCGCGCTCGCCTCCCGCGACGCCGTCGCCATGCTCGGCGGGCCCAGCTG 589 consensus_13179#1 GGGCGTGCTCCTCGGCCGCAAGGACTCCCTCACCGCCAGCATAGACATGGCCAAAGAGGA 656 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 GGGCGTGCTGCTCGGCCGCAAGGACTCGCGCTTCGTTACCAAGAACGCCACGGAGGAGCT 649 consensus_13179#1 TCTCCCGAACCCGAAAGACAGCCTGGCCGAACTCATCAGGATGTTCAAGGAGCACGACCT 716 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 CCCGGACCCGAGAAACGGCCACCTCGACGTCCTCCTCGGGGTGTTCCGCGAGCACGGCCT 709 consensus_13179#1 CGACGAGCGTGACCTCACCGCGCTCTCCGGTGCACACACCGTCGGCATGGCACATGACTG 776 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 CGACGAACGCGACCTCACCGCGCTCTCCGGCGCGCACACCGTCGGCAAGGCCCACAGCTG 769 consensus_13179#1 CAAGAACTACGACGACCGCATCTACAGTCGCGTCGGCCAGGGCGGCGACAGCATCGACCC 836 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 CGACAACTTCGAGGGCCGCATCGACGG------CGGCGAGGGCTACGACGACATCGACCC 823 consensus_13179#1 ATCCTTCGCGGCGCTGCGCAGGCAGGAGTGCGAGCAG------AAGCACGACAAGGCCAC 890 consensus_13179#2 ---------------ACGCAGGCAGGAGTGCGANNAG------AAGCACGGCAACGCCAC 39 consensus_13179#0 GTCCTACGCGGCGGAGCTCCGTCGGACGTGCCAGCGGCCGGACAACTGCGAGGAGGCCGG 883 * * * * * **** * * ** ** * *** consensus_13179#1 GGCACCGTTCGACGAGCGGACGCCAGCCAAGTTTGACAACGCCTACTACGTCGACCTGCT 950 consensus_13179#2 GGCGCCGTTCGATGAGCGGACGCCAGCCAAGTTCGACAACGCCTACTACGTCGACTTGCT 99 consensus_13179#0 CGTGCCGTTCGACGAGCGGACGCCGATGAAGTTCGACATGCTCTACTACCAGGACCTGCT 943 * ******** *********** ***** **** ******* *** **** consensus_13179#1 CGCGAGGCGGGGGCTCCTCACCTCTGACTAGGAGCTCTACACCCAGGGCTGCCAGACCGG 1010 consensus_13179#2 TGCGAGGCGCGGGCTCCTCACATCCGACCAGGAGCTCTACACCCAGGGGTGCGAGACCGG 159 consensus_13179#0 CTTCAAGCGGGGGCTCCTCGCCACCGACCAGGCGCTCTACACCCCGGGCAGCTGGGCCGG 1003 * *** ********* * * *** *** *********** *** ** * **** consensus_13179#1 CGACCTGGTGAAGACGTACGCCATGAACGGCGACGTGTTCTTCGCCGACTTCACAAGAGC 1070 consensus_13179#2 CGACCTGGTGAAGACGTACGCCATGAACGGCGATGTGTTCTTCGCCGACTTCGCGAGGGC 219 consensus_13179#0 CGAGCTTGTGCTGACCTACTCCCGCAACCAGGAGGCGTTCTTCGCCGACTTCGCGAGGGC 1063 *** ** *** *** *** ** *** ** * **************** * ** ** consensus_13179#1 GATGGTGAAGATGGGGAACATACGCCCAAAGCATTGGTGGACTCCGGCGGAGGTCAGGCT 1130 consensus_13179#2 CATGGTTAAGATGGGGAACATACGGCCGAAGCATTGGTGGACTCCGACGGAGGTCAGGCT 279 consensus_13179#0 GATGGTGAAGATGGGGAACATACGCCCGGACCCTTGG---ACTCCGACGGAGGTCAGGAT 1120 ***** ***************** ** * * **** ****** *********** * consensus_13179#1 CAAGTGCTCGGTGGCCAACACACATTGTTGATGCTC------------ATACTGTTGAGT 1178 consensus_13179#2 CAAGTGCTCGGTGGCCAACACCCATTATTGATGCTCCTCTTGTTAATTATACTGTCGAGT 339 consensus_13179#0 CAAGTGCTCCGTGGCCAATGGTCATTATTGATGGCCGGCC-GTCATATCTCCTTTTGTTT 1179 ********* ******** **** ****** * * ** * * * consensus_13179#1 A----------CAACACAATTATGTTG--CACTCATTTATAAGTGTGATATTT---CCTT 1223 consensus_13179#2 A----------CAACACAAATATGTTGGATACTCATTTGTAAGTGTGAAATT----CCTT 385 consensus_13179#0 AAGCTTTGAGTCCACCCAACTCTTTTTG-GACTCATCTGTATTTGTCTAAATCAAAATTT 1238 * * ** *** * * ** ****** * ** *** * * ** consensus_13179#1 TCGATTTAAT-TGTGCATTAAACTGTAA-GATGTATTTTTCTTTTGTACCTCAATTTTTT 1281 consensus_13179#2 TCGATTTGAT-TGTGCAATAAACTGTAA-GCTGTATTATTCTTTTATAAAAAA------- 436 consensus_13179#0 TACGTTTACTGTATTCGTTTGTATATGTCAATTTTTGTTTCTTCTAACGATGCATTCGTA 1298 * *** * * * * * * * * * * ***** * consensus_13179#1 TATTCATTTTTTTATAATGTATGGGAGATCA----------------------------- 1312 consensus_13179#2 ------------------------------------------------------------ consensus_13179#0 TATGAATTCGTATATGTGCAATATGATGTGATGCGAAATTAAAAATGTGTATTGGCACGT 1358 consensus_13179#1 --------------------- consensus_13179#2 --------------------- consensus_13179#0 TTTGAATGATCATTAAAAAGA 1379 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||