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Oryza sativa
cluster # 1320 cluster # 1320       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1320#0 length = 1250 sequences # 2  

consensusID : consensus_1320#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1250
fasta sequence
                              [CCACCAGGCGCCGCATAATGTACCCAATCCTGACACGGGGAGTTATGTGACAATAATACATACCGGCGGCTTTAGTGTCTGTAATTGGAATGAGTTACAATCTGAATCCCTTAACGAGGATCCATTTGGAGGGCAAGTCTGGTGCCATGCAAGCCGCGGTAATTCCAAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCTGTAGTTGGACCTTGGCCGGCCGCCGTTCCAGCCTCACGGCGAGCAACCGACCTGCTCGACCCTTCTTGCCAGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCGCGGTCACTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCACAAGGATGTTTTCATTAATCAAAAAACCTCTCACTTCGACTTCTCGTCGCTGGCCGCCTCTCCTCCACGAAGGCCGCGTGCGCTGCACTACCCTCGACGCACCGGCACGGCCGGCCGTGCGTGCTAGTGTGCGGTGTTATGGGTGCACGGCCAGTACCGCGGCGGGAGGAGGTGGTGGTCGTGACGGAGCTGGAGCTGCGGATGCAGCTGCTCGGCGGCGGCGGCAACTGCTACAACATCAACGACAACGCCGACCTCCTCGCGGAGATCCTGGCGCGGCTGGGCGGCGCCATCGCCCACGCGCACGCCAGGGCCCGCCTGTCCCTCTCCCTCTCGCTGTCGCTCTTCTCCATCGACTGCTACGAGCGCCTCGGCGGCGGTGGCGGCGCCGGCGCCGGCAGGCAGCCGCAGCCGTCGTCACTGCTCTTCCTGTGCAAGCCAGTGGACGTCTCGTGAGTCCCCTCTGAATAGGCGTACACGTGTACGTACGCGGTCGCATCCGCCCACCCGCTCGGGCAATCCGGGCCGTACGATCCACGCCGTCGCGTTCTTCTTGGCGTACGTGCGCTGCTACTAGCTTGTCTGGCGCACGACGCTTAACATAATTGGTTACTTAATTATTATTATTAGCAGTACGAACAATAAGAATTGATTATTATTAAGCTGTACCTGCGAGCCATATTCAATATGGGAAAAAAATAATTAATGATAC]

[+] EMBL BI795940             [CCACCAGGCGCCGCATAATGTACCCAATCCTGACACGGGGAGTTATGTGACAATAATACATACCGGCGGCTTTAGTGTCTGTAATTGGAATGAGTTACAATCTGAATCCCTTAACGAGGATCCATTTGGAGGGCAAGTCTGGTGCCATGCAAGCCGCGGTAATTCCAAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCTGTAGTTGGACCTTGGCCGGCCGCCGTTCCAGCCTCACGGCGAGCAACCGACCTGCTCGACCCTTCTTGCCAGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCGCGGTCACTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCACAAGGATGTTTTCATTAATCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK110560             [                                                                                                                                                                                                                                                                                                                                                        TTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTC CGGTC CTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGC CAAGGATGTTTTCATTAATTACTGGACCTCTCACTTCGACTTCTCGTCGCTGGCCGCCTCTCCTCCACGAAGGCCGCGTGCGCTGCACTACCCTCGACGCACCGGCACGGCCGGCCGTGCGTGCTAGTGTGCGGTGTTATGGGTGCACGGCCAGTACCGCGGCGGGAGGAGGTGGTGGTCGTGACGGAGCTGGAGCTGCGGATGCAGCTGCTCGGCGGCGGCGGCAACTGCTACAACATCAACGACAACGCCGACCTCCTCGCGGAGATCCTGGCGCGGCTGGGCGGCGCCATCGCCCACGCGCACGCCAGGGCCCGCCTGTCCCTCTCCCTCTCGCTGTCGCTCTTCTCCATCGACTGCTACGAGCGCCTCGGCGGCGGTGGCGGCGCCGGCGCCGGCAGGCAGCCGCAGCCGTCGTCACTGCTCTTCCTGTGCAAGCCAGTGGACGTCTCGTGAGTCCCCTCTGAATAGGCGTACACGTGTACGTACGCGGTCGCATCCGCCCACCCGCTCGGGCAATCCGGGCCGTACGATCCACGCCGTCGCGTTCTTCTTGGCGTACGTGCGCTGCTACTAGCTTGTCTGGCGCACGACGCTTAACATAATTGGTTACTTAATTATTATTATTAGCAGTACGAACAATAAGAATTGATTATTATTAAGCTGTACCTGCGAGCCATATTCAATATGGGAAAAAAATAATTAATGATAC]


>consensus_1320#0 CCACCAGGCGCCGCATAATGTACCCAATCCTGACACGGGGAGTTATGTGACAATAATACA TACCGGCGGCTTTAGTGTCTGTAATTGGAATGAGTTACAATCTGAATCCCTTAACGAGGA TCCATTTGGAGGGCAAGTCTGGTGCCATGCAAGCCGCGGTAATTCCAAGCTCCAATAGCG TATATTTAAGTTGTTGCAGTTAAAAAGCTCTGTAGTTGGACCTTGGCCGGCCGCCGTTCC AGCCTCACGGCGAGCAACCGACCTGCTCGACCCTTCTTGCCAGGCGATGCGCTCCTGGCC TTAACTGGCCGGGTCGTGCCTCCGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGC AAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCGCGGTCACTATTG TGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCA TAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCACA AGGATGTTTTCATTAATCAAAAAACCTCTCACTTCGACTTCTCGTCGCTGGCCGCCTCTC CTCCACGAAGGCCGCGTGCGCTGCACTACCCTCGACGCACCGGCACGGCCGGCCGTGCGT GCTAGTGTGCGGTGTTATGGGTGCACGGCCAGTACCGCGGCGGGAGGAGGTGGTGGTCGT GACGGAGCTGGAGCTGCGGATGCAGCTGCTCGGCGGCGGCGGCAACTGCTACAACATCAA CGACAACGCCGACCTCCTCGCGGAGATCCTGGCGCGGCTGGGCGGCGCCATCGCCCACGC GCACGCCAGGGCCCGCCTGTCCCTCTCCCTCTCGCTGTCGCTCTTCTCCATCGACTGCTA CGAGCGCCTCGGCGGCGGTGGCGGCGCCGGCGCCGGCAGGCAGCCGCAGCCGTCGTCACT GCTCTTCCTGTGCAAGCCAGTGGACGTCTCGTGAGTCCCCTCTGAATAGGCGTACACGTG TACGTACGCGGTCGCATCCGCCCACCCGCTCGGGCAATCCGGGCCGTACGATCCACGCCG TCGCGTTCTTCTTGGCGTACGTGCGCTGCTACTAGCTTGTCTGGCGCACGACGCTTAACA TAATTGGTTACTTAATTATTATTATTAGCAGTACGAACAATAAGAATTGATTATTATTAA GCTGTACCTGCGAGCCATATTCAATATGGGAAAAAAATAATTAATGATAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)