These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13201#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1689 fasta sequence [CTAAACCATAAAGTCCCCCCGTCTCATGTCGTCTCATCACTCACTTATAATCACCCCCATCCACTTAATCACGCTCTCAACGCTGCTGTGTCACGTCACGTCACGCGCGGCTCCGTAATAAGACCACCAACCTCCTCCTCCTCCCTCCCACGTTTGGAGCTCTCGTCTCGTCTCGCGGCCTCGAGCCCTCGACCAACCAACCACCCGCTTCTTCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTGAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCGCGGCGGGGAGGGGTGGGGGCGGGAGCGCGGGGCTGGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACAGGCCGATGTCGCCGCTCCCGGCGCCGGATGTCGCCGCCGCGCCGCGGACGGCGG-AGGAGGTCTGGAAGGAGATAACTGGTGCGGGCGTCGCCGCCGCCGCCGGCGGCGTGGTGCCCCCTGCTGCTGCTGCTGCTGCTGCCCCGGCCGTCGTCGCTGGCGCTGGCGCTGGCACCGGCGCGGAGATGACGCTGGAGGACTTTCTGGCGAGGGAGGGCGCGGTGAAGGAAGACGAGGCTGTGGTCACCGATCCCTCGGCGGCCAAGGGGCAGGTGGTGATGGGGTTCCTGAACGGGGCAGAGGTCACCGGAGGCGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACGCCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGACTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATCTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAGTTTATGTAGCATTTGCTCCTGTTTTGTCAATTCTTCTGTTTTATCGGCAGTAGCCTAGTTGCGGTGAATACATGAGTATTTAGGTGACACGAAGCTTAAATGTCTGGAGTCATATGCTACGGAGGGGAGAGTGCGTACGAGCTACAAAAGCAATCATATGTGTAGGGAGGGGAGAGTGCATATGAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTTGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTACGAGTACTGAGTAGTACTAAACAGGGTGACTCTAGGTATGCTGATATGATATCTAGTTAGGCATTACTTCTGATTCTCTGTTTGGTGCCACGACTCAAATTGTCTGTACATACACGTTGGATGTAAAGTCACATTATCAAGTGAAATCATGATGTATTTCCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK067919 [CTAAACCATAAAGTCCCCCCGTCTCATGTCGTCTCATCACTCACTTATAATCACCCCCATCCACTTAATCACGCTCTCAACGCTGCTGTGTCACGTCACGTCACGCGCGGCTCCGTAATAAGACCACCAACCTCCTCCTCCTCCCTCCCACGTTTGGAGCTCTCGTCTCGTCTCGCGGCCTCGAGCCCTCGACCAACCAACCACCCGCTTCTTCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAG AAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTGAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCGCGGCGGGGAGGGGTGGGGGCGGGAGCGCGGGGCTGGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACAGGCCGATGTCGCCGCTCCCGGCGCCGGATGTCGCCGCCGCGCCGCGGACGGCGG AGGAGGTCTGGAAGGAGATAACTGGTGCGGGCGTCGCCGCCGCCGCCGGCGGCGTGGTGCCCCCTGCTGCTGCTGCTGCTGCTGCCCCGGCCGTCGTCGCTGGCGCTGGCGCTGGCACCGGCGCGGAGATGACGCTGGAGGACTTTCTGGCGAGGGAGGGCGCGGTGAAGGAAGACGAGGCTGTGGTCACCGATCCCTCGGCGGCCAAGGGGCAGGTGGTGATGGGGTTCCTGAACGGGGCAGAGGTCACCGGAGGCGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACGCCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGACTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATCTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAGTTTATGTAGCATTTGCTCCTGTTTTGTCAATTCTTCTGTTTTATCGGCAGTAGCCTAGTTGCGGTGAATACATGAGTATTTAGGTGACACGAAGCTTAAATGTCTGGAGTCATATGCTACGGAGGGGAGAGTGCGTACGAGCTACAAAAGCAATCATATGTGTAGGGAGGGGAGAGTGCATATGAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTTGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTACGAGTACTGAGTAGTACTAAACAGGGTGACTCTAGGTATGCTGATATGATATCTAGTTAGGCATTACTTCTGATTCTCTGTTTGGTGCCACGACTCAAATTGTCTGTACATACACGTTGGATGTAAAGTCACA ] [+] EMBL AU163242 [ CTCGTCTCGCGGCCTCGAGCCCTCGACCAACCAACCACCCGCTTCTTCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTNAGGCGGATGATGGCGTCGAGGGTNATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCGGNCCGGGG ] [+] EMBL AU163229 [ TCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTGAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCGCGGCGGGGAGNGGTGGGGNCGGGANCNCGGGGCTNGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTTCCCCT ] [+] EMBL AU108452 [ TCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTGAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCGCGGCGGGGAGGGGTGGGGGCGGGAGCNCGGGGCTGGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACANGCCGATGTCGCCGCTCCC ] [+] EMBL AU108443 [ TCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTGAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCG GGCGGGGAGGGGTGGGGGCGGGAGCGCGGGGCTNGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACANGCCGATGTCGCCGCTCCCGGCGCCGGATGTCGCCGCCGTACCGCGACCGGCGGAAGGAGGTCTTGAAGGAGA ] [+] EMBL AU097297 [ TCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTNAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCG GGCGGGGAGGGGTGGGGGCGGGA CGCGGGGCTGGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACG ] [+] EMBL OSU25283 [ TCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACAGGCCGATGTCGCCGCTCCCGGCGCCGGATGTCGCCGCCGCGCCGCGGACGGCGG AGGAGGTCTGGAAGGAGATAACTGGTGCGGGCGTCGCCGCCGCCGCCGGCGGCGTGGTGCCCCCTGCTGCTGCTGCTGCTGCTGCCCCGGCCGTCGTCGCTGGCGCTGGCGCTGGCACCGGCGCGGAGATGACGCTGGAGGACTTTCTGGCGAGGGAGGGCGCGGTGAAGGAAGACGAGGCTGTGGTCACCGATCCCTCGGCGGCCAAGGGGCAGGTGGTGATGGGGTTCCTGAACGGGGCAGAGGTCACCGGAGGCGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACGCCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGACTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATCTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAGTTTATGTAGCATTTGCTCCTGTTTTGTCAATTCTTCTGTTTTATCGGCAGTAGCCTAGTTGCGGTGAATACATGAGTATTTAGGTGACACGAAGCTTAAATGTCTGGAGTCATATGCTACGGAGGGGAGAGTGCGTACGAGCTACAAAAGCAATCATATGTGTAGGGAGGGGAGAGTGCATATGAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTTGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTACGAGTACTGAGTAGTACTAAACAGGGTGACTCTAGGTATGCTGATATGATATCTAGTTAGGCATTACTTCTGATTCTCTGTTTGGTGCCACGACTCAAATTGTCTGTACATACACGTTGGATGTAAAGTCACATTATCAAGTGAAATCATGATGTATTTCCTCCAga ] [+] EMBL CK085133 [ CTTTCTGGCGAGGGAGGGCGCGGTGAAGGAAGACGAGGCTGTGGTCACCGATCCCTCGGCGGCCAAGGGGCAGGTGGTGATGGGGTTCCTGAACGGGGCAGAGGTCACCGGAGGCGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTA ] [+] EMBL BP432990 [ ctaGAACGGGGCAGAGGTCACCGGAGGCGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACGCCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGACTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATCTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAG TTATGTA CATTTGCT CTG TTTG C ATTCTTC ] [-] EMBL CA759878 [ GAGGAAGCGGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACCTCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGGCTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCCTTAGGAAAACGTCAGCCCGAGATTTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAGTTTATGTAGCAGTTGCTCCTGTTTTGTCAATTTTTCTGTTTTATCGGCAGTAGCCTAGTTGCGGTGAATACCTGAGTATTTAGGTGCCCCGAAGCTTAAATGTTTGGGGTCATTTGCTACGGAGGGGAGAGTGCGTTCGAGCTACAAAAGCATTTATTTGTGTAGGGAGGGGAGAGTGCATTTTAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTGGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTTCGAGTTTTGAGTAGTTCTAAACAGGGAGCCTCTAGGTATGCTGATTTGACATTTAGTTAGGCATTACTTTTGATTCTCTGTTTGGGGCCCCGACTCAAATTGTCTGTACATACCCGTTGGATGTAAAGTCCCCTTATCAAGTGAAATCATGATGTATTTCCTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA759877 [ GAGGAAGCGGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACCTCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGGCTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCCTTAGGAAAACGTCAGCCCGAGATTTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAGTTTATGTAGCAGTTGCTCCTGTTTTGTCAATTTTTCTGTTTTATCGGCAGTAGCCTAGTTGCGGTGAATACCTGAGTATTTAGGTGCCCCGAAGCTTAAATGTTTGGGGTCATTTGCTACGGAGGGGAGAGTGCGTTCGAGCTACAAAAGCATTTATTTGTGTAGGGAGGGGAGAGTGCATTTTAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTGGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTTCGAGTTTTGAGTAGTTCTAAACAGGGAGCCTCTAGGTATGCTGATTTGACATTTAGTTAGGCATTACTTTTGATTCTCTGTTTGGGGCCCCGACTCAAATTGTCTGTACATACCCGTTGGATGTAAAGTCCCCTTATCAAGTGAAATCATGATGTATTTCCTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU166263 [ TTATCGGCAGTAGCCTAGTTGCGGTGAATACATGAGTATTTAGGTGACACGAAGCTTAAATGTCTGGAGTCATATGCTACGGAGGGGAGAGTGCGTACGAGCTACAAAAGCAATCATATGTGTAGGGAGGGGAGAGTGCATATGAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTTGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTACGAGTACTGAGTAGTACTAAACAGGGTGACTCTAGGTATGCTGATATGATATCTAGTTAGGCATTACTTCTGATTCTCTGTTTGGTGCCACGACTCAAATTGTCTGTACATACACGTTGGATGTAAAGTCACATTATCAAGTGAAATCATGATGTATTTCCTCCAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||