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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13212#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1795 fasta sequence
[TTTTTTTTTTTTTTTAGATTGGCAAAAAGCTTTTGCTTGTTAGCAATATGATCAC-AGATTCACA-GTTTACACATGAAGAAGTCTATGGGCATGTTAGGACATCATCTCTTTGATCATGCAACATTGCAAAATGGGCAGTGATCCCTTACAAAAGAGGTCCCATTGCCAAATACCACGATTTACATCGAAAATTGCAATTGTTTGGATCTCAAAGTTCTGTATATCTTCTGTCTAGGATCTGCAAAATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTTCACGATTCAGATAGGAAACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT-CAACAGAGAAAAGAATCTTCAATGCAGTACCGAGACCAA-GAACTTGGAGCTTT-CCCCATAATCGACACTTC-TCACATCC-AACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCAGGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTGTAAAGCAATTGCTTCACT-AAAGACTGTGTTTTCAAGTCCTCTTCAGGATTGCCGGTGTTGTACTCAG-CCTGCTCAAGGTAATCTGCTGCCTTTGTCACAGCCCGAAGAAC-AACAGGTAAGTGAAGTACAAATTTTGTACACGCTCGGGGTACTT-AGAACACGGTCATCCA-CCAAGGAGGA-TATGT-TCCACAAGGTGGCAGATTCATCTAGAAGATAATCATAAGCAATGTGTACTGAAATTGAGGAGTGCAACCCTGAAATTAGCTTGTACAGTGCCTTCTTCTCCTGACACATTTCTTCAGACGGATATTTTGGACAGTTTTCTTTGTAGACAGAGTCCCATATTCTGCGAGCAGAATCACCAGTATAGCCAGTGTAACGTTCAGGGTTGAGTTGAAGATTCACATAAGTCATCTCAGCATTATCAGTCTCATCGTCATATGTCCATGGATTGTCGGTTTCAATCCATCCTTTGAAAACCTTGGCATCAAGGGTTCTATCAACAGTAGCCTGTGGTTTTCCTTCCTGACAGATCATACTATCTGGAGAAAGGCCACTGTAAGGCTTCTTGAATGGCTCAGGAAACTCATTCTCTGGGCACTCACAGACACTACAATCCGTAAGCCGACACATTCCATCATCAGGCCAGAAAGGGCAGTCACACCACAATTTAACCTTGAAGTACCTGAAGAAGGGCAAAGTGACGAGCTCCTGCAGGATCGGGTGCAGCACCTCCTCGTTGATGGCGTCCACCGTCTCGTAGTCGCAGCAGCAATCCTCCACCATCCCCGTGTACTTCCTCGTCCCGGGGCAGCCGCAGTCTCCGCCACGCGAGGACGAGGAGGCCGCCGGGAAGCTGCGCGAGCTGACGGCGACGGCGAGGAGCGCCACGAGCAGCGCCCCCACCCCCGCGGCCGCCGCCCACCGACCCCGCTTCCGGCGCTTGCCTCCCGCCGCAGCCGCCGCGGCGGCGGGGGCGGGGGCAGGGGCGGCACCGTTCGCCGCGGGAGCGGGCTCCTGAGGAGGCATCCCGCCTCCGCCCTGGAGTGGAAGGTTATAGAAGCGAG]
[+] EMBL CF307348 [TTTTTTTTTTTTTTTTTTTTGGCAAAAAGCTTTTGCTTGTTAGCAATATGATCAC AGATTCACA GTTTACACATGAAGAAGTCTATGGGCATGTTAGGACATCATCTCTTTGATCATGCAACATTGCAAAATGGGCAGTGATCCCTTACAAAAGAGGTCCCATTGCCAAATACCACGATTTACATCGAAAATTGCAATTGTTTGGATCTCAAAGTTCTGTATATCTTCTGTCTAGGATCTGCAAAATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTTCACGATTCAGATAGGAAACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAA ]
[+] EMBL CB654132 [ tccTTTTTTTAGATTGGCAAAAAGCTTTTGCTTGTTAGCAATATGATCAC AGATTCACA GTTTACACATGAAGAAGTCTATGGGCATGTTAGGACATCATCTCTTTGATCATGCAACATTGCAAAATGGGCAGTGATCCCTTACAAAAGAGGTCCCATTGCCAAATACCACGATTTACATCGAAAATTGCAATTGTTTGGATCTCAAAGTTCTGTATATCTTCTGTCTAGGATCTGCAAAATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTTCACGATTCAGATAGGAAACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAATGCAGTACCGAGACCAA GAACTTGGAGCTTT CCCCATAATCGACACTTC TCACATCC AACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCAGGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTGTAAAGCAATTGCTTCACT AAAGA ]
[+] EMBL CF330735 [ TTTTTTTAGATTGGCAAAAAGCTTTTGCTTGTTAGCAATATGATCAC AGATTCACA GTTTACA ]
[-] EMBL CF330736 [ TTTTTTAGATTGGCAAAAAGCTTTTGCTTGTTAGCAATATGATCAC AGATTCACA GTTTACA ]
[+] EMBL CB624072 [ AAAAGCTTTTGCTTGTCAGCAATATGATCACAAGATTCACAGGTTTACACATGAAGAAGTCTATGGGCATGTTAGGACATCATCTCTTTGATCATGCAACATTGCAAAATGGGCAGTGATCCCTTACAAAAGAGGTCCCATTGCCAAATACCACGATTTACATCGAAAATTGCAATTGTTTGGCTCTCAAAGTTCTGTATATCTTCTGTCTAGGATCTGCAAAATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTCCACGATTCAGATAGGAAACACCGGTTTCACAGTAAAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAATGCAGTACCAAGACCAA GAACTTGGAGCTTT CCCCATAATCGACACTTC TCACATCC AACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCAGGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTGTAAAGCAATTGCTTCACT AAAGACTGTGTTTTCAAGTCCTCTTCAGGATTGCCGGTGTTGTACTCAG CCTGTTCAAGGTAAT ]
[+] EMBL BE040220 [ CATTGCAAAATGGGCAGTGATCCCTTACAAAAGAGGTCCCATTGCCAAATACCACGATTTACATCGAAAATTGCAATTGTTTGGCTCTCAAAGTTCTGTATATCTTCTGTCTAGGATCTGCAAAATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTCCACGATTCAGATAGGAAACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAATGCAGTACCAAGACCAA GAACTTGGAGCTTT CCCCATAATCGACACTTC TCACATCC AACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCANGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTTGAAAGCATTTGCTTCACTAAAAGACTGTG TTTCAAGTCCTCTTCAGGATTGCCGGTGTTGTACTCAGCCCTG TCAAGGTAGTCTGCTGCCTTTGTCACAGCCCGAAGAAC AACCGGTAAGTGGAGGACAAATTTTGGACACGCTCGGGGTACTT ACGACCCGGTCATCCA CCAAGGAGGA TATGT TCCACAAGG ]
[-] EMBL CA998869 [ AATTCTCTAGTAAGCTTCACCCCAGCACCTACATCATTGTTCTAGTATGGATCAAAGTTGTAAATACATCTCAGTTTAACGCTATTTCACGATTCAGATAGGAAACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAATGCAGTACCGAGACCAA GAACTTGGAGCTTT CCCCATAATCGACACTTC TCACATCC AACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCAGGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTGTAAAGCAATTGCTTCACT AAAGACTGTGTTTTCAAGTCCTCTTCAGGATTGCCGGTGTTGTACTCAG CCTGCTCAAGGTAATCTGCTGCCTTTGTCACAGCCCGAAGAACAAACAGGTAAGTGAAGTACAAATTTTGTACACGCTCGGGGTACTTCAGAACACGGTCAT ]
[-] EMBL AA750002 [ aTCAGATAG AACACCGGTTTCACAGTAGAAGAGCTCTGTTGTTTAATGACATCCTCAATTGATGGTCCTTTTTCATGTACAAAGTTGACAGATTCTGACAGCCTATTCAGAAGGTTTACTAGTGCAATGACCTCATTTCGCTGCAGCTGGAGTGATTGATTCAAATGGTTCTCTCCATCCAACAGAGAAAAGAATCTTCAATGCAGTACCAAGACCAAGGAACc ]
[-] EMBL CF310787 [ TGGAGTGATTGATTCAAATGGTTCTCTCCAT CAACAGAGAAAAGAATCTTCAATGCAGTACCGAGACCAA GAACTTGGAGCTTTCCCCCATAATCGACACTTCTTCACATCCAAACACAATCCATAATTGCACTGATATTTCTAAATTGCTTCTGAATCTCCTGCTTTAGCTCAGGGCCATTTTCACCTTGCCAGAGTTTTGCTTCATCAAATGGTAACGGGCACGCTGATCTTAATTTGGGGTTGTAAAGCAATTGCTTCACT AAAGACTGTGTTTTCAAGTCCTCTTCAGGATTGCCGGTGTTGTACTCAG CCTGCTCAAGGTAATCTGCTGCCTTTGTCACAGCCCGAAGAACAAACAGGTAAGTGAAGTACAAATTTTGTACACGCTCGGGGTACTTCAGAACACGGTCATACAGCAAAGGAAGATTATGTCCCCACAAGTTGGCAGATTCATCTAGAAGATAATCATAAGCAATGTGTACTGAAATTGAGGAGTGCAACCCTGAAATTAGCTTGTACAGTGCCTTCTTCTCCTGACACATTTCTTCAGACGGATATTTTGGACAGTTTTCTTTGTAGACAGAGTCCCATATTCTGCGAGCAGAATCACCAGTATAGCCAGTGTAACGTTCAGGGTTGAGTTGAAGATTCACATA ]
[-] EMBL CB624071 [ TCCCATATTCTGCGAGCAGAATCACCAGTATAGCCAGTGTAACGTTCAGGGTTGAGTTGAAGATTCACATAAGTCATCTCAGCATTATCAGTCTCATCGTCATATGTCCATGGATTGTCGGTTTCAATCCATCCTTTGAAAACCTTGGCATCAAGGGTTCTATCAACAGTAGCCTGTGGTTTTCCTTCCTGACAGATCATACTATCTGGAGAAAGGCCACTATAAGGCTTCTTGAATGGCTCAGGAAACTCATTCTCTGGGCACTCACAGACACTACAATCCGTAAGCCGACACATTCCATCATCAGGCCAGAAAGGGCAGTCACACCACAATTTAACCTTGAAGTACCTGAAGAAGGGCAAAGTGACGAGCTCCTGCAGGATCGGGTGCAGCACCTCCTCGTTGATGGCGTCCACCGTCTCGTAGTCGCAGCAGCAATCCTCCACCATCCCCGTGTACTTCCTCGTCCCGGGGCAGCCGCAGTCTCCGCCGCGCGAGGACGAGGAGGCCGCCGGGAAGCTGCGCGAGCTGACGGCGACGGCGAGGAGCGCCACGAGCAGCGCCCCCACCCCCGCGGCCGCCGCCCACCGACCCCGCTTCCGGCGCTTGCCTCCCGCCGCAGCCGCCGCGGCGGCGGGGGCGGGGGCAGGGGCGGCACCGTTCGCCGCGGGAGCGGGCTCCTGAGGAGGCATCCCGCCTCCGCCCTGGAGTGGAAGGTTATAGAAGCG ]
[-] EMBL CB654131 [ taTGCGAGCAGAATCACCAGTATAGCCAGTGTAACGTTCAGGGTTGAGTTGAAGATTCACATAAGTCATGTCAGCATTATCAGTCTCATCGTCATATGTCCACGGATTGTCGGTCTCAATCCATCCTTTGAAAACCTTGGCATCAAGGGTTCTATCAACAGTAGCCTGTGGTTTTCCTTCCTGACAGATCATACTATCTGGAGAAAGGCCACTGTAAGGCTTCTAGAATGGCTCAGGAAACTCATTCTGTGGGCACTCACAGACACTACAATCCGTAAGCCGACACATTCCATCATCAGGCCAGAAAGGGCAGTCACACCACAATTTAACCTTGAAGTACCTGAAGAAGGGCAAAGTGACGAGCTCCTGCAGGATCGGGTGCAGCACCTCTTCGTTGATGGCGTCCACCGTCTCGTAGTCGCAGCAGCAATCCTCCACCATCCCCGTGTACTTCCTCGTCCCGGGGCAGCCGCAGTCTCCGCCACGCGAGGACGAGGAGGCCGCCGGGAAGCTGCGCGAGCTGTCGGCGACGGCGAGGAGCGCCACGAGCAGCGCCCCCACCCCCGCGGCCGCCGCCCACCGACCCCGCTTCCGGCGCTTGCCTCCCGCCGCAGCCGCCGCGGCGGCGGGGGCGGGGGCAGGGGCGGCGCCGTTCGCCGCGGGAGCGGGCTCCTGAGGAGGCATCCCGCCTCCGCCCTGGAGTGGAAGGTTCTAGAAGCGAG]
[-] EMBL CB652669 [ GTGTAACGTTCAGGGTGGAGTTGAAGATTCACATAAGTCATCTCAGCATTATCAGTCTCATCGTCATATGTCCATGGATTGTCGGTTTCAATCCATCCTTTGAAAACCTGGGCATCAAGGGTTCTATCAACAGTAGCCTGTGGTTTTCCTTCCTGACAGATCATACTATCTGGAGAAAGGCCACTGTAAGGCTTCTTGAATGGCTCAGGAAACTCATTCTCTGGGCACTCACAGACACTACAATCCGTAAGCCGACACATTCCATCATCAGGCCAGAAAGGGCAGTCACACCACAATTTAACCTTGAAGTACCTGAAGAAGGGCAAAGTGACGAGCTCCTGCAGGATCGGGTGCAGCACCTCCTCGTTGATGGCGTCCACCGTCTCGTAGTCGCAGCAGCAATCCTCCACCATCCCCGTGTACTTCCTCGTCCCGGGGCAGCCGCAGTCTCCGCCACGCGAGGACGAGGAGGCCGCCGGGAAGCTGCGCG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||