cluster # 13223

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Oryza sativa
cluster # 13223 cluster # 13223 Sequences # 12 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13223#0 length = 2186 sequences # 3
consensus_13223#1 length = 1234 sequences # 5

consensus_13223#2 length = 774 sequences # 1
consensus_13223#3 length = 679 sequences # 1
consensus_13223#4 length = 569 sequences # 2

consensusID : consensus_13223#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2186
fasta sequence

                              [GGGGAATTGGGGTTGGAGACGCGGACTCGGAGGGCTCGTGGGTGGCGGCGGACTCCGGCGACTGGTGGCTTGAGGATCAGCGCCGTCAGCGCCTGCATCCAGGTAGGCAACTCAATACGCCGGTGGCCGTGGTTGTTCCGCCCCCGCGGCGGCGGGGCCTTCGATCCGTACTGACGTCTACTCGCCGGCGGCGGATTGAGGCGGAATGTTTGGGTGGCCGCAGGCGGAGATTGTCTCCGCAAAGGAGGAAGGGAGCCCATGGTGGTTCTACAGCGAGGAGGTCCCTTGATCCTTGTGGTTGTGGAGGCCCAAACTGGCATTCTCCCTTGCTGAAATCTCACTGTTCACTGTTTCTTCAGACTGGAAGTCTGGAACTGGTTCAGATTCCATTCTCTTTGGATCACTTCTATATTAGAATCAACAGAGATGATTATGCTTGTGCATAGATTGCTAATTATCACTAGTTTAGCTGTAGAATAAGTATACAGATAGCATATAGTAGTTCTATGTGATTATGTGAAGGATGAAGCAAAAGGTTCAGTAGTAAGCACCTTCTCCCCAAGTTACAGAAACCAAAAGAAAGAGGAAAAGAAGATAAATGAGACATACATACTCCTGGCACGTACATACACATTCTAGGAATTCTGATCACACCAACAAGCAATCTACACTACTGAAGTACTGATCTCATATTAGTAACTTTTTTTTTTTTGGACAAGTCACATATTACCACTTGCCTGCTTTCTTGTCGTTCTACGATTTACATCCATAGCCTGCTTCCCCGTTGTGCTTCTATGATCATCTTTCCCTCCTTTGGCCTGGGGATATCGTAGTTCTGAGGGTAGCTCATCTGTTCCATCTCCCATTTCATCTTTGACACGACTTTCTCGTGCTGGGGAGAGTACTCCTGCAAGACAGATACTGGTTTTAGACTTTTAGTCCTTTTCTGCCGACATTTTAGTCTACCATTGTTTCAGTTGATAGGTCTCAGGTCCACAATGTGCATTTATTAGTGCAATAACGTTTTAGTGCTACACTAGAAACGGAATTTGTACTTTGATTGCTCTTGCAGTAATGAGGACCTTGACACTGGACCAAGAGCATATGCATAATTGTGATATAATCCTCATTGACAGTTTTACTTAATTAAAACTTTGGCCTTGCAGCTAACTCTCACATTTTTTTCGCAGTGTCCAGGTGTTTAACGACAAAATTGGTGCTGATTGATCAACAAGTTAAGCAGACCAACTCTGGTGACATATACTCACCAGGCAATGCTATAAAGGCATCAGACTGCCTGGCCATCTCAGCCTTCCTCTGGTGCATATCGGACACTGCTTTCACCTCCCCCACTGTCTCACCTGATATCTGCATGTACATACACCATCACACGCGCAAGAAACACACATTATATATTAGCAGAGGAGCCAGCTTTTTGCTTAACCAAAAGAGGACCAACTTTCTTCAGATGGAGAAATAAAGGTATGGGGGACAAGAGAAAATGTGATGGGCTTTTTCTTTGTTAAATCTAGCCAGCATCCCTGCTTGAGAGATTGCAGTCAAGATCAGTGAGATATCATCTATCATGGGGGAACAAGATTTCAGTGAGCATTTCTCCTGATCCTTCATCATAAGTTCTCTTTCTTCTTTCCCGCTAGCAAAAAAGACAAAGGAACAAGATCTACAAACATTATCATATTTCTATCGTTACAATGCTTAAGTGCAGTAATAGTATACTATATCTGGAGATAAACATGATGAGATGACCATGCACTTAAAGATTAGCATTAGGATATATTCGAACAAATATAATTTTAGTTAAAAAAAACTGGTCATATATAGGTGAAAATTTGACTAGTGATATATCCTCCTAGTGGCATTCCTAGTTCCTTTGTAACTATATCACTTTACATTTGACTAGTTAGATGGAAATAGTAATGGTATATTCAAGGGAACCATGGCATGGCGAACACTGAGAGAGGGCTATTGGAGAGTAGAAAGAACATGGTACCTCTCTAGGCATGAGAGTCTTGGGAATGACCCTGCATAGGGACATGACAAAACAAACGTTTTAGAACATGATGAGGAAGACACAAATTCATCACTTTTGACATGAAGCTATTTCATCAGTTTCTAAGATAGTTCTTCAGTTTCATGTATTACTTTTCAACTCTTGCTAATGGAAG]

[+] EMBL AK105228             [GGGGAATTGGGGTTGGAGACGCGGACTCGGAGGGCTCGTGGGTGGCGGCGGACTCCGGCGACTGGTGGCTTGAGGATCAGCGCCGTCAGCGCCTGCATCCAGGTAGGCAACTCAATACGCCGGTGGCCGTGGTTGTTCCGCCCCCGCGGCGGCGGGGCCTTCGATCCGTACTGACGTCTACTCGCCGGCGGCGGATTGAGGCGGAATGTTTGGGTGGCCGCAGGCGGAGATTGTCTCCGCAAAGGAGGAAGGGAGCCCATGGTGGTTCTACAGCGAGGAGGTCCCTTGATCCTTGTGGTTGTGGAGGCCCAAACTGGCATTCTCCCTTGCTGAAATCTCACTGTTCACTGTTTCTTCAGACTGGAAGTCTGGAACTGGTTCAGATTCCATTCTCTTTGGATCACTTCTATATTAGAATCAACAGAGATGATTATGCTTGTGCATAGATTGCTAATTATCACTAGTTTAGCTGTAGAATAAGTATACAGATAGCATATAGTAGTTCTATGTGATTATGTGAAGGATGAAGCAAAAGGTTCAGTAGTAAGCACCTTCTCCCCAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK073708             [                AGACGCGGACTCGGAGGGCTCGTGGGTGGCGGCGGACTCCGGCGACTGGTGGCTTGAGGATCAGCGCCGTCAGCGCCTGCATCCAGGTAGGCAACTCAATACGCCGGTGGCCGTGGTTGTTCCGCCCCCGCGGCGGCGGGGCCTTCGATCCGTACTGACGTCTACTCGCCGGCGGCGGATTGAGGCGGAATGTTTGGGTGGCCGCAGGCGGAGATTGTCTCCGCAAAGGAGGAAGGGAGCCCATGGTGGTTCTACAGCGAGGAGGTCCCTTGATCCTTGTGGTTGTGGAGGCCCAAACTGGCATTCTCCCTTGCTGAAATCTCACTGTTCACTGTTTCTTCAGACTGGAAGTCTGGAACTGGTTCAGATTCCATTCTCTTTGGATCACTTCTATATTAGAATCAACAGAGATGATTATGCTTGTGCATAGATTGCTAATTATCACTAGTTTAGCTGTAGAATAAGTATACAGATAGCATATAGTAGTTCTATGTGATTATGTGAAGGATGAAGCAAAAGGTTCAGTAGTAAGCACCTTCTCCCCAAGTTACAGAAACCAAAAGAAAGAGGAAAAGAAGATAAATGAGACATACATACTCCTGGCACGTACATACACATTCTAGGAATTCTGATCACACCAACAAGCAATCTACACTACTGAAGTACTGATCTCATATTAGTAACTTTTTTTTTTTTGGACAAGTCACATATTACCACTTGCCTGCTTTCTTGTCGTTCTACGATTTACATCCATAGCCTGCTTCCCCGTTGTGCTTCTATGATCATCTTTCCCTCCTTTGGCCTGGGGATATCGTAGTTCTGAGGGTAGCTCATCTGTTCCATCTCCCATTTCATCTTTGACACGACTTTCTCGTGCTGGGGAGAGTACTCCTGCAAGACAGATACTGGTTTTAGACTTTTAGTCCTTTTCTGCCGACATTTTAGTCTACCATTGTTTCAGTTGATAGGTCTCAGGTCCACAATGTGCATTTATTAGTGCAATAACGTTTTAGTGCTACACTAGAAACGGAATTTGTACTTTGATTGCTCTTGCAGTAATGAGGACCTTGACACTGGACCAAGAGCATATGCATAATTGTGATATAATCCTCATTGACAGTTTTACTTAATTAAAACTTTGGCCTTGCAGCTAACTCTCACATTTTTTTCGCAGTGTCCAGGTGTTTAACGACAAAATTGGTGCTGATTGATCAACAAGTTAAGCAGACCAACTCTGGTGACATATACTCACCAGGCAATGCTATAAAGGCATCAGACTGCCTGGCCATCTCAGCCTTCCTCTGGTGCATATCGGACACTGCTTTCACCTCCCCCACTGTCTCACCTGATATCTGCATGTACATACACCATCACACGCGCAAGAAACACACATTATATATTAGCAGAGGAGCCAGCTTTTTGCTTAACCAAAAGAGGACCAACTTTCTTCAGATGGAGAAATAAAGGTATGGGGGACAAGAGAAAATGTGATGGGCTTTTTCTTTGTTAAATCTAGCCAGCATCCCTGCTTGAGAGATTGCAGTCAAGATCAGTGAGATATCATCTATCATGGGGGAACAAGATTTCAGTGAGCATTTCTCCTGATCCTTCATCATAAGTTCTCTTTCTTCTTTCCCGCTAGCAAAAAAGACAAAGGAACAAGATCTACAAACATTATCATATTTCTATCGTTACAATGCTTAAGTGCAGTAATAGTATACTATATCTGGAGATAAACATGATGAGATGACCATGCACTTAAAGATTAGCATTAGGATATATTCGAACAAATATAATTTTAGTTAAAAAAAACTGGTCATATATAGGTGAAAATTTGACTAGTGATATATCCTCCTAGTGGCATTCCTAGTTCCTTTGTAACTATATCACTTTACATTTGACTAGTTAGATGGAAATAGTAATGGTATATTCAAGGGAACCATGGCATGGCGAACACTGAGAGAGGGCTATTGGAGAGTAGAAAGAACATGGTACCTCTCTAGGCATGAGAGTCTTGGGAATGACCCTGCATAGGGACATGACAAAACAAACGTTTTAGAACATGATGAGGAAGACACAAATTCATCACTTTTGACATGAAGCTATTTCATCAGTTTCTAAGATAGTTCTTCAGTTTCATGTATTACTTTTCAACTCTTGCTAATGGAAG]
[+] EMBL AK073319             [                AGACGCGGACTCGGAGGGCTCGTGGGTGGCGGCGGACTCCGGCGACTGGTGGCTTGAGGATCAGCGCCGTCAGCGCCTGCATCCAGGTAGGCAACTCAATACGCCGGTGGCCGTGGTTGTTCCGCCCCCGCGGCGGCGGGGCCTTCGATCCGTACTGACGTCTACTCGCCGGCGGCGGATTGAGGCGGAATGTTTGGGTGGCCGCAGGCGGAGATTGTCTCCGCAAAGGAGGAAGGGAGCCCATGGTGGTTCTACAGCGAGGAGGTCCCTTGATCCTTGTGGTTGTGGAGGCCCAAACTGGCATTCTCCCTTGCTGAAATCTCACTGTTCACTGTTTCTTCAGACTGGAAGTCTGGAACTGGTTCAGATTCCATTCTCTTTGGATCACTTCTATATTAGAATCAACAGAGATGATTATGCTTGTGCATAGATTGCTAATTATCACTAGTTTAGCTGTAGAATAAGTATACAGATAGCATATAGTAGTTCTATGTGATTATGTGAAGGATGAAGCAAAAGGTTCAGTAGTAAGCACCTTCTCCCCAAGTTACAGAAACCAAAAGAAAGAGGAAAAGAAGATAAATGAGACATACATACTCCTGGCACGTACATACACATTCTAGGAATTCTGATCACACCAACAAGCAATCTACACTACTGAAGTACTGATCTCATATTAGTAAC TTTTTTTTTTTGGACAAGTCATATATTACCACTTGCCTGCTTTCTTGTCGTTCTACGATTTACATCCATAGCCTGCTTCCCCGTTGTGCTTCTATGATCATCTTTCCCTCCTTTGGCCTGGGGATATCGTAGTTCTGAGGGTAGCTCATCTGTTCCATCTCCCATTTCATCTTTGACACGACTTTCTCGTGCTGGGGAGAGTACTCCTGCAAGACAGATACTGGTTTTAGACTTTTAGTCCTTTTCTGCCGACATTTTAGTCTACCATTGTTTCAGTTGATAGGTCTCAGGTCCACAATGTGCATTTATTAGTGCAATAACGTTTTAGTGCTACACTAGAAACGGAATTTGTACTTTGATTGCTCTTGCAGTAATGAGGACCTTGACACTGGACCAAGAGCATATGCATAATTGTGATATAATCCTCATTGACAGTTTTACTTAATTAAAACTTTGGCCTTGCAGCTAACTCTCACATTTTTTTCGCAGTGTCCAGGTGTTTAACGACAAAATTGGTGCTGATTGGTCAACAAGTTAAGCAGACCAACTCTGGTGACATATACTCACCAGGCAATGCTATAAAGGCATCAGACTGCCTGGCCATCTCAGCCTTCCTCTGGTGCATATCGGACACTGCTTTCACCTCCCCCACTGTCTCACCTGATATCTGCATGTACATACACCATCACACGCGCAAGAAACACACATTATATATTAGCAGGGGAGCCAGCTTTTTGCTTAACCAAAAGAGGACCAACTTTCTTCAGATGGAGAAATAAAGGTATGGGGGACAAGAGAAAATGTGATGGGCTTTTTCTTTGTTAAATCTAGCCAGCATCCCTGCTTGAGAGATTGCAGTCAAGATCAGTGAGATATCATCTATCATGGGGGAACAAGATTTCAGTGAGCATTTCTCCTGATCCTTCATCATAAGTTCTCTTTCTTCTTTCCCGCTAGCAAAAAAGACAAAGGAACAAGATCTACAAACATTATCATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]




>consensus_13223#0
GGGGAATTGGGGTTGGAGACGCGGACTCGGAGGGCTCGTGGGTGGCGGCGGACTCCGGCG
ACTGGTGGCTTGAGGATCAGCGCCGTCAGCGCCTGCATCCAGGTAGGCAACTCAATACGC
CGGTGGCCGTGGTTGTTCCGCCCCCGCGGCGGCGGGGCCTTCGATCCGTACTGACGTCTA
CTCGCCGGCGGCGGATTGAGGCGGAATGTTTGGGTGGCCGCAGGCGGAGATTGTCTCCGC
AAAGGAGGAAGGGAGCCCATGGTGGTTCTACAGCGAGGAGGTCCCTTGATCCTTGTGGTT
GTGGAGGCCCAAACTGGCATTCTCCCTTGCTGAAATCTCACTGTTCACTGTTTCTTCAGA
CTGGAAGTCTGGAACTGGTTCAGATTCCATTCTCTTTGGATCACTTCTATATTAGAATCA
ACAGAGATGATTATGCTTGTGCATAGATTGCTAATTATCACTAGTTTAGCTGTAGAATAA
GTATACAGATAGCATATAGTAGTTCTATGTGATTATGTGAAGGATGAAGCAAAAGGTTCA
GTAGTAAGCACCTTCTCCCCAAGTTACAGAAACCAAAAGAAAGAGGAAAAGAAGATAAAT
GAGACATACATACTCCTGGCACGTACATACACATTCTAGGAATTCTGATCACACCAACAA
GCAATCTACACTACTGAAGTACTGATCTCATATTAGTAACTTTTTTTTTTTTGGACAAGT
CACATATTACCACTTGCCTGCTTTCTTGTCGTTCTACGATTTACATCCATAGCCTGCTTC
CCCGTTGTGCTTCTATGATCATCTTTCCCTCCTTTGGCCTGGGGATATCGTAGTTCTGAG
GGTAGCTCATCTGTTCCATCTCCCATTTCATCTTTGACACGACTTTCTCGTGCTGGGGAG
AGTACTCCTGCAAGACAGATACTGGTTTTAGACTTTTAGTCCTTTTCTGCCGACATTTTA
GTCTACCATTGTTTCAGTTGATAGGTCTCAGGTCCACAATGTGCATTTATTAGTGCAATA
ACGTTTTAGTGCTACACTAGAAACGGAATTTGTACTTTGATTGCTCTTGCAGTAATGAGG
ACCTTGACACTGGACCAAGAGCATATGCATAATTGTGATATAATCCTCATTGACAGTTTT
ACTTAATTAAAACTTTGGCCTTGCAGCTAACTCTCACATTTTTTTCGCAGTGTCCAGGTG
TTTAACGACAAAATTGGTGCTGATTGATCAACAAGTTAAGCAGACCAACTCTGGTGACAT
ATACTCACCAGGCAATGCTATAAAGGCATCAGACTGCCTGGCCATCTCAGCCTTCCTCTG
GTGCATATCGGACACTGCTTTCACCTCCCCCACTGTCTCACCTGATATCTGCATGTACAT
ACACCATCACACGCGCAAGAAACACACATTATATATTAGCAGAGGAGCCAGCTTTTTGCT
TAACCAAAAGAGGACCAACTTTCTTCAGATGGAGAAATAAAGGTATGGGGGACAAGAGAA
AATGTGATGGGCTTTTTCTTTGTTAAATCTAGCCAGCATCCCTGCTTGAGAGATTGCAGT
CAAGATCAGTGAGATATCATCTATCATGGGGGAACAAGATTTCAGTGAGCATTTCTCCTG
ATCCTTCATCATAAGTTCTCTTTCTTCTTTCCCGCTAGCAAAAAAGACAAAGGAACAAGA
TCTACAAACATTATCATATTTCTATCGTTACAATGCTTAAGTGCAGTAATAGTATACTAT
ATCTGGAGATAAACATGATGAGATGACCATGCACTTAAAGATTAGCATTAGGATATATTC
GAACAAATATAATTTTAGTTAAAAAAAACTGGTCATATATAGGTGAAAATTTGACTAGTG
ATATATCCTCCTAGTGGCATTCCTAGTTCCTTTGTAACTATATCACTTTACATTTGACTA
GTTAGATGGAAATAGTAATGGTATATTCAAGGGAACCATGGCATGGCGAACACTGAGAGA
GGGCTATTGGAGAGTAGAAAGAACATGGTACCTCTCTAGGCATGAGAGTCTTGGGAATGA
CCCTGCATAGGGACATGACAAAACAAACGTTTTAGAACATGATGAGGAAGACACAAATTC
ATCACTTTTGACATGAAGCTATTTCATCAGTTTCTAAGATAGTTCTTCAGTTTCATGTAT
TACTTTTCAACTCTTGCTAATGGAAG

consensusID : consensus_13223#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1234
fasta sequence

                              [AAAGAGAGCAAAACTTAAGCTAGCTCTGGGTGCTGCATTGTCTGCAGTTTACAAAGGTAGATCAATTAGAGGAGAATGAGGCAGCAGCAGCAGCAGCAGCAGGAGAGCAGGTTCAAGAGGACCTGCGTGTTCTGCGGCAGTAGCCAGGGCAACAAGACCACCTACCGCGATGCCGCCGTCGACCTCGCCAAAGAGCTGGTCGCGAGGGGCATTGACCTTGTGTACGGCGGCGGCAGCATTGGCCTCATGGGCCTCGTCTCCCAGGCCGTCTACGACGGTGGCAGACATGTCATTGGGGTCATCCCCAAGACTCTCATGACCCCCGAGATAATCGGAGAGACAGTAGGGGAGGTGAGGCCAGTGTCCGACATGCACCAGAGGAAGGCTGAGATGGCGAGGCAGTCTGATGCATTCATAGCCCTGCCCGGAGGATACGGAACACTGGAAGAGCTGCTTGAAGTCATCACATGGGCGCAATTAGGCATCCATCATAAACCGGTTGGGCTGCTGAACGTTGATGGGTACTACAACTCCCTGCTCACATTCATCGACCAAGCCGTGGAAGAAGGCTTCATCAGCCCCAGTGCTCGCCGCATCATCGTGTCGGCTCCAACGGCACAAGAACTCATGGACAAGCTTGAGGAATACGTCCCTTACCATGATAGGGTTGCGTCTGGGCTGAACTGGGAGACTGGTCATCTAGGGTTCTAAGCTGTTGCAGCGAGCTTAATTAAGCTTAAATGAATTGAAGAAAGGCGAACCATCGAGCAGCCATCAACATTAAGCATTGCTTGTTAATTGTGCTCGATCTATGTAGTAGTAGTAGCAGCTTGTTAACCAGTCTAGATTGTCTTTTTTTTTTCTCCTACGAAGCATGGAGTTTGTCATCTCAGTTTGGGTAAGAAAAACTAGTAGCACCTAATCAGCCATATATCGATGTTCAAGATCCAGTAACTGAGAATTAATTGACACTAAACCAAGTGTCAAAGATTGACCTGATCTGGTTACTGCATCATAAGTTTTAAGATTGTTGCAAGTTGTTGATTGAAACACTCTTTGTTTTGGAGATGTAAGCCGTTTCTATTTCCATTTCCATTATTTGATCGGTGTTATTATACACACTGATACATATTGAGCGAAAGCAAAAGAGGCCCATAACATTATTTAGAAAGTGTTATGGGCTTGACATTAAAATGGATCGGTCCGNNTTTTCCGCCAAAAAAAAAAAAAAAAA]

[+] EMBL CF310796             [AAAGAGAGCAAAACTTAAGCTAGCTCTGGGTGCTGCATTGTCTGCAGTTTACAAAGGTAGATCAATTAGAGGAGAATGAGGCAGCAGCAGCAGCAGCAGCAGGAGAGCAGGTTCAAGAGGACCTGCGTGTTCTGCGGCAGTAGCCAGGGCAACAAGACCACCTACCGCGATGCCGCCGTCGACCTCGCCAAAGAGCTGGTCGCGAGGGGCATTGACCTTGTGTACGGCGGCGGCAGCATTGGCCTCATGGGCCTCGTCTCCCAGGCCGTCTACGACGGTGGCAGACATGTCATTGGGGTCATCCCCAAGACTCTCATGACCCCCGAGATAATCGGAGAGACAGTAGGGGAGGTGAGGCCAGTGTCCGACATGCACCAGAGGAAGGCTGAGATGGCGAGGCAGTCTGATGCATTCATAGCCCTGCCCGGAGGATACGGAACACTGGAAGAGCTGCTTGAAGTCATCACATGGGCGCAATTAGGCATCCATCATAAACCGGTTGGGCTGCTGAACGTTGATGGGTACTACAACTCCCTGCTCACATTCATCGACCAAGCCGTGGAAGAAGGCTTCATCAGCCCCAGTGCTCGCCGCATCATCGTGTCGGCTCCAACGGCACAAGAACTCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK099538             [ AAGAGAGCAAAACTTAAGCTAGCTCTGGGTGCTGCATTGTCTGCAGTTTACAAAGGTAGATCAATTAGAGGAGAATGAGGCAGCAGCAGCAGCAGCAGCAGGAGAGCAGGTTCAAGAGGACCTGCGTGTTCTGCGGCAGTAGCCAGGGCAACAAGACCACCTACCGCGATGCCGCCGTCGACCTCGCCAAAGAGCTGGTCGCGAGGGGCATTGACCTTGTGTACGGCGGCGGCAGCATTGGCCTCATGGGCCTCGTCTCCCAGGCCGTCTACGACGTTGGCAGACATGTCATTGGGGTCATCCCCAAGACTCTCATGACCCCCGAGATAATCGGAGAGACAGTAGGGGAGGTGAGGCCAGTGTCCGACATGCACCAGAGGAAGGCTGAGATGGCGAGGCAGTCTGATGCATTCATAGCCCTGCCCGGAGGATACGGAACACTGGAAGAGCTGCTTGAAGTCATCACATGGGCGCAATTAGGCATCCATCATAAACCGGTTGGGCTGCTGAACGTTGATGGGTACTACAACTCCCTGCTCACATTCATCGACCAAGCCGTGGAAGAAGGCTTCATCAGCCCCAGTGCTCGCCGCATCATCGTGTCGGCTCCAACGGCACAAGAACTCATGGACAAGCTTGAGGAATACGTCCCTTACCATGATAGGGTTGCGTCTGGGCTGAACTGGGAGACTGGTCATCTAGGGTTCTAAGCTGTTGCAGCGAGCTTAATTAAGCTTAAATGAATTGAAGAAAGGCGAACCATCGAGCAGCCATCAACATTAAGCATTGCTTGTTAATTGTGCTCGATCTATGTAGTAGTAGTAGCAGCTTGTTAACCAGTCTAGATTGTCTTTTTTTTTTCTCCTACGAAGCATGGAGTTTGTCATCTCAGTTTGGGTAAGAAAAACTAGTAGCACCTAATCAGCCATATATCGATGTTCAAGATCCAGTAACTGAGAATTAATTGACACTAAACCAAGTGTCAAA                                                                                                                                                                                                                                                      ]
[+] EMBL CA999638             [                                                                                                                                                                                                                                                                                                  CATTGGGGTCATCCCCAAGACTCTCATGACCCCCGAGATAATCGGAGAGACAGTAGGGGAGGTGAGGCCAGTGTCCGACATGCACCAGAGGAAGGCTGAGATGGCGAGGCAGTCTGATGCATTCATAGCCCTGCCCGGAGGATACGGAACACTGGAAGAGCTGCTTGAAGTCATCACATGGGCGCAATTAGGCATCCATCATAAACCGGTTGGGCTGCTGAACGTTGATGGGTACTACAACTCCCTGCTCACATTCATCGACCAAGCCGTGGAAGAAGGCTTCATCAGCCCCAGTGCTCGCCGCATCATCGTGTCGGCTCCAACGGCACAAGAACTCATGGACAAGCTTGAGGAATACGTCCCTTACCATGATAGGGTTGCGTCTGGGCTGAACTGGGAGACTGGTCATCTAGGGTTCTAAGCTGTTGCAGCGAGCTTAATTAAGCTTAAATGAATTGAAGAAAGGCGAACCATCGAGCAGCCATCAACATTAAGCATTGCTTGTTTATTGTGCTCGATCTATGTAGTAGTA                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB663086             [                                                                                                                                                                                                                                                                                                                                                         GGGGA GTGATGCCAGTGTCCGACATGCACCAGAGGAAGGCTGAGATGGCGAGGCAGTCTGATGCATTCATAGCCCTGCCCGGAGGATACGGAACACTGGAAGAGCTGCTTGAAGTCATCACATGGGCGCAATTAGGCATCCATCATAAACCGGTTGGGCTGCTGAACGTTGATGGGTACTACAACTCCCTGCTCACATTCATCGACCAAGCCGTGGAAGAAGGCTTCATCAGCCCCAGTGCTCGCCGCATCATCGTGTCGGCTCCAACGGCACAAGAACTCATGGACAAGCTTGAGGAATACGTCCCTTACCATGATAGGGTTGCGTCTGGGCTGAACTGGGAGACTGGTCATCTAGGGTTCTAAGCTGTTGCAGCGAGCTTAATTAAGCTTAAATGAATTGAAGAAAGGCGAACCATCGAGCAGCCATCAACATTAAGCATTGCTTGTTAATTGTGCTCGATCTATGTAGTAGTAGTAGCAGCTTGTTAACCAGTCTAGATTGTCTTTTTTTTTTCTCCTACG                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU056538             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCTTGTTAACCAGTCTAGATTGTCTTTTTTTTTTCTCCTACGAAGCATGGNGTTTGTCATCTCAGTTTGGGTAAGAAAAACTAGTAGCACCTAATCAGCCATATATCGATGTTCAAGATCCAGTAACTGAGAATTAATTGACACTAAACCAAGTGTCAAAGATTGACCTGATCTGGTTACTGCATCATAAGTTTTAAGATTGTTGCAAGTTGTTGATTGAAACACTCTTTGTTTTGGAGATGTAAGCCGTTTCTATTTCCATTTCCATTATTTGATCGGTGTTATTATACACACTGATACATATTGAGCGAAAGCAAAAGAGGCCCATAACATTATTTAGAAAGTGTTATGGGCTTGACATTAAAATGGATCGGTCCGNNTTTTCCGCCAAAAAAAAAAAAAAAAA]




>consensus_13223#1
AAAGAGAGCAAAACTTAAGCTAGCTCTGGGTGCTGCATTGTCTGCAGTTTACAAAGGTAG
ATCAATTAGAGGAGAATGAGGCAGCAGCAGCAGCAGCAGCAGGAGAGCAGGTTCAAGAGG
ACCTGCGTGTTCTGCGGCAGTAGCCAGGGCAACAAGACCACCTACCGCGATGCCGCCGTC
GACCTCGCCAAAGAGCTGGTCGCGAGGGGCATTGACCTTGTGTACGGCGGCGGCAGCATT
GGCCTCATGGGCCTCGTCTCCCAGGCCGTCTACGACGGTGGCAGACATGTCATTGGGGTC
ATCCCCAAGACTCTCATGACCCCCGAGATAATCGGAGAGACAGTAGGGGAGGTGAGGCCA
GTGTCCGACATGCACCAGAGGAAGGCTGAGATGGCGAGGCAGTCTGATGCATTCATAGCC
CTGCCCGGAGGATACGGAACACTGGAAGAGCTGCTTGAAGTCATCACATGGGCGCAATTA
GGCATCCATCATAAACCGGTTGGGCTGCTGAACGTTGATGGGTACTACAACTCCCTGCTC
ACATTCATCGACCAAGCCGTGGAAGAAGGCTTCATCAGCCCCAGTGCTCGCCGCATCATC
GTGTCGGCTCCAACGGCACAAGAACTCATGGACAAGCTTGAGGAATACGTCCCTTACCAT
GATAGGGTTGCGTCTGGGCTGAACTGGGAGACTGGTCATCTAGGGTTCTAAGCTGTTGCA
GCGAGCTTAATTAAGCTTAAATGAATTGAAGAAAGGCGAACCATCGAGCAGCCATCAACA
TTAAGCATTGCTTGTTAATTGTGCTCGATCTATGTAGTAGTAGTAGCAGCTTGTTAACCA
GTCTAGATTGTCTTTTTTTTTTCTCCTACGAAGCATGGAGTTTGTCATCTCAGTTTGGGT
AAGAAAAACTAGTAGCACCTAATCAGCCATATATCGATGTTCAAGATCCAGTAACTGAGA
ATTAATTGACACTAAACCAAGTGTCAAAGATTGACCTGATCTGGTTACTGCATCATAAGT
TTTAAGATTGTTGCAAGTTGTTGATTGAAACACTCTTTGTTTTGGAGATGTAAGCCGTTT
CTATTTCCATTTCCATTATTTGATCGGTGTTATTATACACACTGATACATATTGAGCGAA
AGCAAAAGAGGCCCATAACATTATTTAGAAAGTGTTATGGGCTTGACATTAAAATGGATC
GGTCCGNNTTTTCCGCCAAAAAAAAAAAAAAAAA

consensusID : consensus_13223#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 774
fasta sequence

                              [AAGCTCCCTCTGGGTGCTGCATTGTCTGCAGTTTACAAAGGTAGATCAATTAAAGGAGAATGAGGCAGCAGCAGCAGCAGCAGCAGGAGAGCAGGTTCAAGAGGACCTGCGTGTTCTGCGGCAGTAGCCAGGGCAACAAGACCACCTACCGCGATGCCGCCGTCGACCTCGCCAAAGAGCTGGTCGCGAGGGGCATTGACCTTGTGTACGGCGGCGGCAGCATTGGCCTCATGGGCCTCGTCTCCCAGGCCGTCTACGACGGTGGCAGACATGTCATTGGGGTCATCCCCAAGACTCTCATGACCCCCGAGATAATCGGAGAGACAGTAGGGGAGGTGAGGCCAGTGTCCGACATGCACCAGAGGAAGGCTGAGATGGCGAGGCAGTCTGATGCATTCATAGCCCTGCCCGGTGAGCGCTGCATAGCCCTGCATTTCATAACTGTGCATTGCATTCCATTTCTCAATTTTGTCAGGTCAAGGCGCCAGCAAGATCTCCACGGCTAGTACTGCCTCTTAAGAGCAAGGAGGATACGGAACACTGGAAGAGCTGCTTGAAGTCATCACATGGGCGCAATTAGGCATCCATCATAAACCGGTTGGGCTGCTGAACGTTGATGGGTACTACAACTCCCTGCTCACATTCATCGACCAAGCCGTGGAAGAAGGCTTCATCAGCCCCAGTGCTCGCCGCATCATCGTGTCGGCTCCAACGGCACAAGAACTCATGGACAAGCTTGAGGAATACGTCCCTTACCATGATAGGGTTGCGTCT]

[+] EMBL CB642098             [AAGCTCCCTCTGGGTGCTGCATTGTCTGCAGTTTACAAAGGTAGATCAATTAAAGGAGAATGAGGCAGCAGCAGCAGCAGCAGCAGGAGAGCAGGTTCAAGAGGACCTGCGTGTTCTGCGGCAGTAGCCAGGGCAACAAGACCACCTACCGCGATGCCGCCGTCGACCTCGCCAAAGAGCTGGTCGCGAGGGGCATTGACCTTGTGTACGGCGGCGGCAGCATTGGCCTCATGGGCCTCGTCTCCCAGGCCGTCTACGACGGTGGCAGACATGTCATTGGGGTCATCCCCAAGACTCTCATGACCCCCGAGATAATCGGAGAGACAGTAGGGGAGGTGAGGCCAGTGTCCGACATGCACCAGAGGAAGGCTGAGATGGCGAGGCAGTCTGATGCATTCATAGCCCTGCCCGGTGAGCGCTGCATAGCCCTGCATTTCATAACTGTGCATTGCATTCCATTTCTCAATTTTGTCAGGTCAAGGCGCCAGCAAGATCTCCACGGCTAGTACTGCCTCTTAAGAGCAAGGAGGATACGGAACACTGGAAGAGCTGCTTGAAGTCATCACATGGGCGCAATTAGGCATCCATCATAAACCGGTTGGGCTGCTGAACGTTGATGGGTACTACAACTCCCTGCTCACATTCATCGACCAAGCCGTGGAAGAAGGCTTCATCAGCCCCAGTGCTCGCCGCATCATCGTGTCGGCTCCAACGGCACAAGAACTCATGGACAAGCTTGAGGAATACGTCCCTTACCATGATAGGGTTGCGTCT]




>consensus_13223#2
AAGCTCCCTCTGGGTGCTGCATTGTCTGCAGTTTACAAAGGTAGATCAATTAAAGGAGAA
TGAGGCAGCAGCAGCAGCAGCAGCAGGAGAGCAGGTTCAAGAGGACCTGCGTGTTCTGCG
GCAGTAGCCAGGGCAACAAGACCACCTACCGCGATGCCGCCGTCGACCTCGCCAAAGAGC
TGGTCGCGAGGGGCATTGACCTTGTGTACGGCGGCGGCAGCATTGGCCTCATGGGCCTCG
TCTCCCAGGCCGTCTACGACGGTGGCAGACATGTCATTGGGGTCATCCCCAAGACTCTCA
TGACCCCCGAGATAATCGGAGAGACAGTAGGGGAGGTGAGGCCAGTGTCCGACATGCACC
AGAGGAAGGCTGAGATGGCGAGGCAGTCTGATGCATTCATAGCCCTGCCCGGTGAGCGCT
GCATAGCCCTGCATTTCATAACTGTGCATTGCATTCCATTTCTCAATTTTGTCAGGTCAA
GGCGCCAGCAAGATCTCCACGGCTAGTACTGCCTCTTAAGAGCAAGGAGGATACGGAACA
CTGGAAGAGCTGCTTGAAGTCATCACATGGGCGCAATTAGGCATCCATCATAAACCGGTT
GGGCTGCTGAACGTTGATGGGTACTACAACTCCCTGCTCACATTCATCGACCAAGCCGTG
GAAGAAGGCTTCATCAGCCCCAGTGCTCGCCGCATCATCGTGTCGGCTCCAACGGCACAA
GAACTCATGGACAAGCTTGAGGAATACGTCCCTTACCATGATAGGGTTGCGTCT

consensusID : consensus_13223#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence

                              [NACAATGGTACTGGTTGTATTCGACAGTGAAATTCAGACGTTTATAGTATTTCGCGTGCCTCCCTTTGTTTTTTTTCCTTCATCGAAAGAAAAAGGAAACAGAGGGACAGGTCTACGTTCTGTTCTGCAAAGGAGTACTAGTACGTATCAAGACAAGTACAGCAGCATGTACAGAGATTTTGTCATGTCAGAAAATGGCAACGCCCATGCGTTCCTCTGCATCTCCTGTCTGCATGTGTATCCCCAAGTTTTATGGGAACAGGAGAACGCTGCCCCATTGTTGCCTCTGCAACGAATTTGCTGCTGCACNGCACGATGATGATGAGGAGTTGTTGTTTCCGTGGCAGGTCGCGAGGGGCATTGACCTTGTGTACGGCGGCGGCAGCATTGGCCTCATGGGCCTCGTCTCCCAGGCCGTCTACGACGGTGGCAGACATGTCATTGGGTACACACTCTCTTCTTCTTCTTCCTCTTTCCATCTTTAATTTCCCTGGCCTCTGAATTTCAATCCACCANGACAGTNAAGCTTCAGGTTCTATGTTAAAGGCCACTGATGTTATTGCGTCATGCCATAGCTTCTATGTTAAAATACTCTANGCATGATATTTTGTCAGTTTAGCTTAGGATTGATNCACAGTAATTAATTAAGTCTGATTGAAGAGTATTTTTATTATATNAC]

[+] EMBL AU056537             [NACAATGGTACTGGTTGTATTCGACAGTGAAATTCAGACGTTTATAGTATTTCGCGTGCCTCCCTTTGTTTTTTTTCCTTCATCGAAAGAAAAAGGAAACAGAGGGACAGGTCTACGTTCTGTTCTGCAAAGGAGTACTAGTACGTATCAAGACAAGTACAGCAGCATGTACAGAGATTTTGTCATGTCAGAAAATGGCAACGCCCATGCGTTCCTCTGCATCTCCTGTCTGCATGTGTATCCCCAAGTTTTATGGGAACAGGAGAACGCTGCCCCATTGTTGCCTCTGCAACGAATTTGCTGCTGCACNGCACGATGATGATGAGGAGTTGTTGTTTCCGTGGCAGGTCGCGAGGGGCATTGACCTTGTGTACGGCGGCGGCAGCATTGGCCTCATGGGCCTCGTCTCCCAGGCCGTCTACGACGGTGGCAGACATGTCATTGGGTACACACTCTCTTCTTCTTCTTCCTCTTTCCATCTTTAATTTCCCTGGCCTCTGAATTTCAATCCACCANGACAGTNAAGCTTCAGGTTCTATGTTAAAGGCCACTGATGTTATTGCGTCATGCCATAGCTTCTATGTTAAAATACTCTANGCATGATATTTTGTCAGTTTAGCTTAGGATTGATNCACAGTAATTAATTAAGTCTGATTGAAGAGTATTTTTATTATATNAC]




>consensus_13223#3
NACAATGGTACTGGTTGTATTCGACAGTGAAATTCAGACGTTTATAGTATTTCGCGTGCC
TCCCTTTGTTTTTTTTCCTTCATCGAAAGAAAAAGGAAACAGAGGGACAGGTCTACGTTC
TGTTCTGCAAAGGAGTACTAGTACGTATCAAGACAAGTACAGCAGCATGTACAGAGATTT
TGTCATGTCAGAAAATGGCAACGCCCATGCGTTCCTCTGCATCTCCTGTCTGCATGTGTA
TCCCCAAGTTTTATGGGAACAGGAGAACGCTGCCCCATTGTTGCCTCTGCAACGAATTTG
CTGCTGCACNGCACGATGATGATGAGGAGTTGTTGTTTCCGTGGCAGGTCGCGAGGGGCA
TTGACCTTGTGTACGGCGGCGGCAGCATTGGCCTCATGGGCCTCGTCTCCCAGGCCGTCT
ACGACGGTGGCAGACATGTCATTGGGTACACACTCTCTTCTTCTTCTTCCTCTTTCCATC
TTTAATTTCCCTGGCCTCTGAATTTCAATCCACCANGACAGTNAAGCTTCAGGTTCTATG
TTAAAGGCCACTGATGTTATTGCGTCATGCCATAGCTTCTATGTTAAAATACTCTANGCA
TGATATTTTGTCAGTTTAGCTTAGGATTGATNCACAGTAATTAATTAAGTCTGATTGAAG
AGTATTTTTATTATATNAC

consensusID : consensus_13223#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 569
fasta sequence

                              [CAGTCTGATGCATTCATAGCCCTGCCCGGTGAGCGCTGCATAGCCCTGCATTTCATAACTGTGCATTGCATTCCATTTCTCAATTTTGTCAGGTCAAGGCGCCAGCAAGATCTCCACGGCTAGTACTGCCTCTTAAGAGCAAGGTTAATAGTAGTTGTAGGCAGCCGGCGTTAATTCCATCCAACTCAGCTAGTAACTCTTTTTGCACCTTGTGAATACAATAAGTGACCTGCAACGCTGGGCCCATCAACTTCACATCATAATAAAATAACTTAAGCTTCCTCTCACACATGCAGCTCACAACCTTTGCGCTCACCACTTTTCACCATTTTTCTCTCGAAGCTGGTGCTAGAGCCAGCGATAAAATTGTCGCCCACTCTCACTCTCTCTCCTCTTCTCACTCATCCAGCTCAACACTGTAGCTGACGTGTTTCTCCTATCGCCAGTCCAGCTTGTACTGTTGTACTCGCTCTAATAAATCCTCTAGTAATAGTACTGCGTGTGTCAGACAAGTAATAACACGCCAAGTGGCAACGTGGCACCCTTGTTTACTTACGGTATTAGTATTA]

[+] EMBL CF304246             [CAGTCTGATGCATTCATAGCCCTGCCCGGTGAGCGCTGCATAGCCCTGCATTTCATAACTGTGCATTGCATTCCATTTCTCAATTTTGTCAGGTCAAGGCGCCAGCAAGATCTCCACGGCTAGTACTGCCTCTTAAGAGCAAGGTTAATAGTAGTTGTAGGCAGCCGGCGTTAATTCCATCCAACTCAGCTAGTAACTCTTTTTGCACCTTGTGAATACAATAAGTGACCTGCAACGCTGGGCCCATCAACTTCACATCATAATAAAATAACTTAAGCTTCCTCTCACACATGCAGCTCACAACCTTTGCGCTCACCACTTTTCACCATTTTTCTCTCGAAGCTGGTGCTAGAGCCAGCGATAAAATTGTCGCCCACTCTCACTCTCTCTCCTCTTCTCACTCATCCAGCTCAACACTGTAGCTGACGTGTTTCTCCTATCGCCAGTCCAGCTTGTACTGTTGTACTCGCTCTAATAAATCCTCTAGTAATAGTACTGCGTGTGTCAGACAAGTAATAACACGCCAAGTGGCAACGTGGCACCCTTGTTTACTTACGGTATTAGTATTA]
[+] EMBL CF304534             [CAGTCTGATGCATTCATAGCCCTGCCCGGTGAGCGCTGCATAGCCCTGCATTTCATAACTGTGCATTGCATTCCATTTCTCAATTTTGTCAGGTCAAGGCGCCAGCAAGATCTCCACGGCTAGTACTGCCTCTTAAGAGCAAGGTTAATAGTAGTTGTAGGCAGCCGGCGTTAATTCCATCCAACTCAGCTAGTAACTCTTTTTGCACCTTGTGAATACAATAAGTGACCTGCAACGCTGGGCCCATCAACTTCACATCATAATAAAATAACTTAAGCTTCCTCTCACACATGCAGCTCACAACCTTTGCGCTCACCACTTTTCACCATTTTTCTCTCGAAGCTGGTGCTAGAGCCAGCGATAAAATTGTCGCCCACTCTCACTCTCTCTCCTCTTCTCACTCATCCAGCTCAACACTGTAGCTGACGTGTTTCTCCTATCGCCAGTCCAGCTTGTACTGTTGTACTCGCTCTAATAAATCCTCTAGTAATAGTAC                                                                         ]




>consensus_13223#4
CAGTCTGATGCATTCATAGCCCTGCCCGGTGAGCGCTGCATAGCCCTGCATTTCATAACT
GTGCATTGCATTCCATTTCTCAATTTTGTCAGGTCAAGGCGCCAGCAAGATCTCCACGGC
TAGTACTGCCTCTTAAGAGCAAGGTTAATAGTAGTTGTAGGCAGCCGGCGTTAATTCCAT
CCAACTCAGCTAGTAACTCTTTTTGCACCTTGTGAATACAATAAGTGACCTGCAACGCTG
GGCCCATCAACTTCACATCATAATAAAATAACTTAAGCTTCCTCTCACACATGCAGCTCA
CAACCTTTGCGCTCACCACTTTTCACCATTTTTCTCTCGAAGCTGGTGCTAGAGCCAGCG
ATAAAATTGTCGCCCACTCTCACTCTCTCTCCTCTTCTCACTCATCCAGCTCAACACTGT
AGCTGACGTGTTTCTCCTATCGCCAGTCCAGCTTGTACTGTTGTACTCGCTCTAATAAAT
CCTCTAGTAATAGTACTGCGTGTGTCAGACAAGTAATAACACGCCAAGTGGCAACGTGGC
ACCCTTGTTTACTTACGGTATTAGTATTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      GGGGAATTGGGGTTGGAGACGCGGACTCGGAGGGCTCGTGGGTGGCGGCGGACTCCGGCG 60
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      ACTGGTGGCTTGAGGATCAGCGCCGTCAGCGCCTGCATCCAGGTAGGCAACTCAATACGC 120
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      CGGTGGCCGTGGTTGTTCCGCCCCCGCGGCGGCGGGGCCTTCGATCCGTACTGACGTCTA 180
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      CTCGCCGGCGGCGGATTGAGGCGGAATGTTTGGGTGGCCGCAGGCGGAGATTGTCTCCGC 240
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      AAAGGAGGAAGGGAGCCCATGGTGGTTCTACAGCGAGGAGGTCCCTTGATCCTTGTGGTT 300
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      GTGGAGGCCCAAACTGGCATTCTCCCTTGCTGAAATCTCACTGTTCACTGTTTCTTCAGA 360
                                                                                   

consensus_13223#1      ----------AAAGAGAGCAAAACTTAAGCTAGCTCTGGGTGCTGCATTGTCTGCAGTTT 50
consensus_13223#2      --------------------------AAGCTCCCTCTGGGTGCTGCATTGTCTGCAGTTT 34
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      -------------------------NACAATGGTACTGGTTGTATTCGACAGTGAAATTC 35
consensus_13223#0      CTGGAAGTCTGGAACTGGTTCAGATTCCATTCTCTTTGGATCACTTCTATATTAGAATCA 420
                                                                                   

consensus_13223#1      ACAAAGGTAGATCAATTAGAGGAGAATGAGGCAGCAGCAGCAGCAGCAGCAGGAGAGCAG 110
consensus_13223#2      ACAAAGGTAGATCAATTAAAGGAGAATGAGGCAGCAGCAGCAGCAGCAGCAGGAGAGCAG 94
consensus_13223#4      -------------------------------------------------CAGTCTGATGC 11
consensus_13223#3      AGACGTTTATAGTATTTCGCGT-GCCTCCCTTTGTTTTTTTTCCTTCATCGAAAGAAAAA 94
consensus_13223#0      ACAGAGATGATTATGCTTGTGCATAGATTGCTAATTATCACTAGTTTAGCTGTAGAATAA 480
                                                                        *          

consensus_13223#1      GTTCAAGAGGACC---TGCGTGTTCTGCG--GCAGTAGCCAGG--GCAACAAGACCACCT 163
consensus_13223#2      GTTCAAGAGGACC---TGCGTGTTCTGCG--GCAGTAGCCAGG--GCAACAAGACCACCT 147
consensus_13223#4      ATTCATA--GCCC---TGCCCGGTGAGCGCTGCATAGCCCTGC--ATTTCATAACTGTGC 64
consensus_13223#3      GGAAACAGAGG------GACAGGTCTACGTTCTGTTCTGCAAA--GGAGTACTAGTACGT 146
consensus_13223#0      GTATACAGATAGCATATAGTAGTTCTATGTGATTATGTGAAGGATGAAGCAAAAGGTTCA 540
                           *                * *    *                     *  *      

consensus_13223#1      ACCGCGATGCCGCCGTCGACCTCGCCAAAGAGCTGGTCGCGAGGGGCATTGACCTTGTGT 223
consensus_13223#2      ACCGCGATGCCGCCGTCGACCTCGCCAAAGAGCTGGTCGCGAGGGGCATTGACCTTGTGT 207
consensus_13223#4      ATTGCATTCCATTTCTCAATTTTGTC--AGGTCAAGGCGCCAGCAAGATC-------TCC 115
consensus_13223#3      ATCAAGACAAGTACAGCAGCATGTACAGAGATTTTGTCATGTCAGAAAATGGCAACGCCC 206
consensus_13223#0      GTAGTAAGCACCTTCTCCCCAAGTTACAGAAACCAAAAGAAAGAGGAAAAGAAGATAAAT 600
                                       *                              *            

consensus_13223#1      ACGGCGGCGGCAGCATTGGC-CTCATGGGCCTCGTCTCCCAGGCCGTCTACGAC--GGTG 280
consensus_13223#2      ACGGCGGCGGCAGCATTGGC-CTCATGGGCCTCGTCTCCCAGGCCGTCTACGAC--GGTG 264
consensus_13223#4      ACGGC-----TAGTACTGCC-TCTTAAGAGCAAGGTTAATAGTAGTTGTAGGCA--GCCG 167
consensus_13223#3      ATGCGTTCCTCTGCATCTCC-TGTCTGCATGTGTATCCCCAAGTTTTATGGGAACAGGAG 265
consensus_13223#0      GAGACATACATACTCCTGGCACGTACATACACATTCTAGGAATTCTGATCACACCAACAA 660
                         *                *                    *       *           

consensus_13223#1      GCAG-ACATGTCATTG--GGGTCATCCCCAAGACT----CTCATGACCCCCGAGATAAT- 332
consensus_13223#2      GCAG-ACATGTCATTG--GGGTCATCCCCAAGACT----CTCATGACCCCCGAGATAAT- 316
consensus_13223#4      GCGT-TAATTCCATCC--AACTCAGCTAGTAACTC----TTTTTGCACCTTGTGA--AT- 217
consensus_13223#3      AACG-CTGCCCCATTGTTGCCTCTGCAACGAATTTG---CTGCTGCACNGCACGATGATG 321
consensus_13223#0      GCAATCTACACTACTGAAGTACTGATCTCATATTAGTAACTTTTTTTTTTTTGGACAAG- 719
                                   *                           *  *         **  *  

consensus_13223#1      CGGAGAGACAGTAGGGGAGGTGA-GGCCAGT-GTCCGACATG-CACCAGAGGAAGGCTGA 389
consensus_13223#2      CGGAGAGACAGTAGGGGAGGTGA-GGCCAGT-GTCCGACATG-CACCAGAGGAAGGCTGA 373
consensus_13223#4      ACAATAAGTGACCTGCAACGCTG-GGCCCAT-CAACTTCACATCATAATAAAATAACTTA 275
consensus_13223#3      ATGAGGAGTTGTTGTTTCCGTGGCAGGTCGC-GAGGGGCATTGACCTTGTGTACGGCGGC 380
consensus_13223#0      -TCACATATTACCACTTGCCTGCTTTCTTGTCGTTCTACGATTTACATCCATA-GCCTGC 777
                          *                                  *             *   *   

consensus_13223#1      GATGGCGAGGCAGTCTGATGCA-TTCATAGCCCTGCCCGG-------------------- 428
consensus_13223#2      GATGGCGAGGCAGTCTGATGCA-TTCATAGCCCTGCCCGGTGAGCGCTGCATAGCCCTGC 432
consensus_13223#4      AGCTTCCTCTCACAC--ATGCAGCTCACAACCTT-TGCGCTCACCACT------------ 320
consensus_13223#3      GGCAGCATTGGCCTC--ATGGGCCTCGTCTCCCAGGCCGTCTACGACGG----------- 427
consensus_13223#0      TTCCCCGTTGTGCTTCTATGATCATCTTTCCCTCCTTTGGCCTGGGGATATCGTAGTTCT 837
                            *           ***    **    **      *                     

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ATTTCATAACTGTGCATTGCATTCCATTTCTCAATTTTGTCAGGTCAAGGCGCCAGCAAG 492
consensus_13223#4      ----------------TTTCACCATTTTTCTC---------------------------- 336
consensus_13223#3      ----------------TGGCAGACATGTCAT----------------------------- 442
consensus_13223#0      GAGGGTAGCTCATCTGTTCCATCTCCCATTTCATCTTTGACACGACTTTCTCGTGCTGGG 897
                                                                                   

consensus_13223#1      -----------------------------------AGGATACGGAACACTG--GAAGAGC 451
consensus_13223#2      ATCTCCACGGCTAGTACTGCCTCTTAAGAGCAAGGAGGATACGGAACACTG--GAAGAGC 550
consensus_13223#4      -----------------------------------TCGAAGCTGG-TGCTA--GAGCCAG 358
consensus_13223#3      -----------------------------------TGGGTACACA-CTCTC--TTCTTCT 464
consensus_13223#0      GAGAGTACTCCT-----------------GCAAGACAGATACTGGTTTTAGACTTTTAGT 940
                                                            *   *                  

consensus_13223#1      TGCTTGAAGTCATCACATGGGCGCAATTAGGCATCCATCATAAACCGGTTGGGCTGC--T 509
consensus_13223#2      TGCTTGAAGTCATCACATGGGCGCAATTAGGCATCCATCATAAACCGGTTGGGCTGC--T 608
consensus_13223#4      CGAT-AAAATTGTCGCCCACTCTCACTCTCTCTCCTCTTCT----CACTCATCCAGC--T 411
consensus_13223#3      TCTTCCTCTTTCCATCTTTAATTTCCCTGGCCTCTGAATTTCAATCCACCANGACAG--T 522
consensus_13223#0      CCTTTTCTGCCGACATTTTAGTCTACCATTGTTTCAGTTGATAGGTCTCAGGTCCACAAT 1000
                          *                                                       *

consensus_13223#1      GAACGTTGATGGGTACTACAACTCCCTGCTCACATTCATCGACCAAGCCGTGGAAGAAGG 569
consensus_13223#2      GAACGTTGATGGGTACTACAACTCCCTGCTCACATTCATCGACCAAGCCGTGGAAGAAGG 668
consensus_13223#4      CAACACTG-TAGCTGACGTGTTTCTCCTATCGCCAGTCCAGCTTGTACTGTTGTACTCGC 470
consensus_13223#3      NAAGCTTCAGGTTCTATGTTAAAGGCCACTGATGTTATTGCGTCATGCCATAGCTTCTAT 582
consensus_13223#0      GTGCATTTATTAGTGCAATAACGTTTTAGTGCTACACTAGAAACGGAATTTGTACTTTGA 1060
                             *                      *                    *         

consensus_13223#1      CTTCATCAGCCCCAGTGCTCGCCGCATCATCGTGTCGGCTCCAACGGCACAAGAAC-TCA 628
consensus_13223#2      CTTCATCAGCCCCAGTGCTCGCCGCATCATCGTGTCGGCTCCAACGGCACAAGAAC-TCA 727
consensus_13223#4      TCTAATAAATCCT----CTAGTAATAGTACTGCGTGTGTCAGACAAGTAATAACACGCCA 526
consensus_13223#3      GTTAAAATACTCTAN-GCATGATATTTTGTCAGTTTAGCTTAGGATTGATNCACAGTAAT 641
consensus_13223#0      TTGCTCTTGCAGTAATGAGGACCTTGACACTGGACCAAGAGCATATGCATAATTGTGATA 1120
                                                                       *           

consensus_13223#1      TGGACAAGCTTGAGGAATACGTCC-CTTACCATGATAGGGTTGCGTCTGGGCTGAACTGG 687
consensus_13223#2      TGGACAAGCTTGAGGAATACGTCC-CTTACCATGATAGGGTTGCGTCT------------ 774
consensus_13223#4      AGTGGCAACGTGGCACCCTTGTTTACTTACGGTATTAGTATTA----------------- 569
consensus_13223#3      TAATTAAGTCTGATTGAAGAGTATTTTTATTATATNAC---------------------- 679
consensus_13223#0      TAATCCTCATTGACAGTTTTACTTAATTAAAACTTTGGCCTTGCAGCTAACTCTCACATT 1180
                                 **              ***                               

consensus_13223#1      GAGACTGGTCATCTAGGGTTCTAAGCTGTTGCAGCGAGCTTAATTAAGCTTAAATGAATT 747
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      TTTTTCGCAGTGTCCAGGTGTTTAACGACAAAATTGGTGCTGATTGATCAACAAGTTAAG 1240
                                                                                   

consensus_13223#1      GAAGAAAGGCGAACCATCGAGCAGCCATCAACATTAAGCATTGCTTGTTAATTGTGCTCG 807
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      CAGACCAACTCTGGTGACATATACTCACCAGGCAATGCTATAAAGGCATCAGACTGCCTG 1300
                                                                                   

consensus_13223#1      ATCTATGTAGTAGTAGTAGCAGCTTGTTAACCAGTCTAGATTGTCTTTTTTTTTTCTCCT 867
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      GCCATCTCAGCCTTCCTCTGGTGCATATCGGACACTGCTTTCACCTCCCCCACTGTCTCA 1360
                                                                                   

consensus_13223#1      ACGAAGCATGGAGTTTGTCATCTCAGTTTGGGTAAGAAAAACTAGTAGCACCTAATCAGC 927
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      CCTGATATCTGCATGTACATACACCATCACACGCGCAAGAAACACACATTATATATTAGC 1420
                                                                                   

consensus_13223#1      CATATATCGATGTTCAAGATCCAGTAACTGAGAATTAATTGACACTAAACCAAGTGTCAA 987
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      AGAGGAGCCAGCTTTTTGCTTAACCAAAAGAGGACCAACTTTCTTCAGATGGAGAAATAA 1480
                                                                                   

consensus_13223#1      AGATTGACCTGATCTGGTTACTGCATCATAAGTTTTAAGATTGTTGCAAGTTGTTGATTG 1047
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      AGGTATGGGGGA-CAAGAGAAAATGTGATGGGCTTTTTCTTTGTTAAATCTAGCCAGCAT 1539
                                                                                   

consensus_13223#1      AAACACTCTTTGTTTTGGAGATGTAAGCCGTTTCTATTTCCATTTCCATTATTTGATCGG 1107
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      CCCTGCTTGAGAGATTGCAGTCAAGATCAGTGAGATATCATCTATCATGGGGGAACAAGA 1599
                                                                                   

consensus_13223#1      TGTTATTATACACACTGATACATATTGAGCGAAAGCAAAAGAGGCCCATAACATTATTTA 1167
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      TTTCAGTGAGCATTTCTCCTGATCCTTCATCATAAGTTCTCTTTCTTCTTTCCCGCTAGC 1659
                                                                                   

consensus_13223#1      GAAAGTGTTATGGGCTTGACATTAAAATGGATCGGTCCGNNTTTTCCGCCAAAAAAAAAA 1227
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      AAAAAAGACAAAGGAACAAGATCTACAAACATTATCATATTTCTATCGTTACAATGCTTA 1719
                                                                                   

consensus_13223#1      AAAAAAA----------------------------------------------------- 1234
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      AGTGCAGTAATAGTATACTATATCTGGAGATAAACATGATGAGATGACCATGCACTTAAA 1779
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      GATTAGCATTAGGATATATTCGAACAAATATAATTTTAGTTAAAAAAAACTGGTCATATA 1839
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      TAGGTGAAAATTTGACTAGTGATATATCCTCCTAGTGGCATTCCTAGTTCCTTTGTAACT 1899
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      ATATCACTTTACATTTGACTAGTTAGATGGAAATAGTAATGGTATATTCAAGGGAACCAT 1959
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      GGCATGGCGAACACTGAGAGAGGGCTATTGGAGAGTAGAAAGAACATGGTACCTCTCTAG 2019
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      GCATGAGAGTCTTGGGAATGACCCTGCATAGGGACATGACAAAACAAACGTTTTAGAACA 2079
                                                                                   

consensus_13223#1      ------------------------------------------------------------
consensus_13223#2      ------------------------------------------------------------
consensus_13223#4      ------------------------------------------------------------
consensus_13223#3      ------------------------------------------------------------
consensus_13223#0      TGATGAGGAAGACACAAATTCATCACTTTTGACATGAAGCTATTTCATCAGTTTCTAAGA 2139
                                                                                   

consensus_13223#1      -----------------------------------------------
consensus_13223#2      -----------------------------------------------
consensus_13223#4      -----------------------------------------------
consensus_13223#3      -----------------------------------------------
consensus_13223#0      TAGTTCTTCAGTTTCATGTATTACTTTTCAACTCTTGCTAATGGAAG 2186