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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13224#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2606 fasta sequence
[GCGTCCAGCCCCCCAGATGAACAAACAACAGCAAACCAAGCGCGACGCGAGACGGAAATGGGGCGGAGAGAGTAGCGCGTAACCCGCAAGCTCCACGCCACCACCACCCTCCCCGAATCCAATCCAAGCCCTAGCGCCAACCGCCGCCGACGAGGACGCCAAATCCCTCGATCTCCTCCTCCTCCTCCGCCTTCCGCCCCCCCAAAACCCTAGCCCCGGCGGGAGGAGGCGGCGGCGGCGGCGGGGGTGCAGATCTTAGGATGTCGGACTCCGCGTCCATGGCCGCCGCCATCGAGGCGCGGTTCAGCGGCCGCGACCTCATCGGCCGCGGCTCCTTCGGCGACGTCTACAAAGGGTTTGACAAGGAACTGCATAAGGAAGTTGCAATAAAAGTTATCGATTTAGAAGAAGCTGAGGATGACATTGAAGACATCCAAAAGGAGATATCTGTTTTGTCACAATGCCGTTGTCCATATATAACTGACTATTATGGCTCATATCTTCATCAAACGAAACTGTGGATAGTAATGGAATATATGGCTGGTGGTTCTGTCGCTGACCTACTCCAAACTGGCCCTCCTCTAGATGAATTGTCTATTGCATGCATTCTGAGGGACTTGTTACATGCAGTTGAATATCTTCATTCAGAAGGAAAGATTCACCGTGACATTAAAGCGGCAAATATCCTCCTGACTGAAAGTGGAGATGTGAAGGTTGCAGACTTTGGTGTTTCTGCGCAGCTGACTAAAACAATGTCAAGGAGAAAGACATTTGTTGGAACTCCCTTTTGGATGGCACCTGAGGTTATTCAAAACTCTGACGGGTACAATGAAAAGGCAGATATCTGGTCGTTAGGTATAACTGCTATTGAAATGGCAAAAGGTGAACCCCCTTTGGCAGATATCCATCCCATGAGAGTTCTTTTCATGATACCTCGTGAAAATCCTCCTCAGCTTGATGAGCATTTCTCTAAACCGATGAAGGAGTTTGTGTCACTATGTTTAAAGAAGAATCCAGCAGAGAGGCTAAGTGCCAAGGATCTTCTTAAGCACCGCTTTGTAAGAAATGCTAGAAAATCTCCAAAGCTTCTGGATAGAATAAGAGAGCGACCGAAGTTTCCAGTAAAAAGCAGTGCGGATGCCACACAAAATGGTCGAACACATGTTGAAGAAGATGATGGTACTGGTACTATCAAGGTTGAGAGGGCTACAAGGGATGTAGTCTCTCCTTCAAGTCAAGGAACTGTTAGGAAAGCTGCTGGCTGGAATCTTCCAGACAGATCAGAGGGCACAGGAACTGTTCGAGGTGGTTTAAAGCCATCACAAGTCACCTCCACCAAGGATAGTAGATCCGATGCTTCTCATAGTCCAAACACACCAAAACGTACAGCTGATCGAGAAAATCAATGGAGAACATCATGGACGGGGTCTGAAGAGTCGATCTCAACAAACCCGTCGCAGAGAGATGCACAAAGTGAATATGGAAGACTAGAGAGTTCTACAGAAGATAATGACCAATCTATAAGTGGGTCTGGAACTGTTGTACTGCGCTCGCCAAGAGCATCTCAGGTGTACCCTGCAGCTACTAACCACAGTTCCAAGCCTCCCAGTAGATTCTCCTCGTATGAAGACACGTCTATCAGTGGGACAGTCGTTCGGAATCAAATTGAAGAACCAGAAACTCCACGATCTTCAAGGTCGAGACTGGGAATCCAAGAAAAGTCACCAAATGCTTCACTGGAGGACAGTGCAACTAACCTTGCAGAGGCAAAGGCTGCTCTCCAGGCTGCGTTTAAAAAGGGTAATGCTCGTGAAAGACATGTTATCAGCAAACATGAAAAGGAATCACATGAACCCAGAATTTCGGCAGTAAACAGTCATGATGCCCCAAGTGAGAATGCTGACAT-GGAAAAAGGTCGCAAACCA-CGCCAGATACATGATGGACAATCAGCTCCTCAAGCTTCTGGTTCTGTATCTTCACCTGCACTCTCGTCATTGATAATTCCTTCTCTAAAAGAGGCTACTGGTGACAAGTTTAACGGACCAGTTGTTCATACATTCCTTGATTCCTTGATGCATCTCGAAAAAGAGCTACCTGGATCTTGTGAGGTGCTGATTGGCAGAATGCTCCATCGGCTAGGGAGCTCGAAGGAGTCCTCGCTGCAAAGTCTTCAAGAGACGGCGACATCAGTTTTCGCAAAGAAATCTGAACCTCCCTCTGAACCT-CCAAGTAACAAGAAAATGGCTAATACACCTTCCTTGGCTGCCCCTACCGTAAGCCCTTTGGCGAGGTTCCTTCTTACAAGGTGGCAAAACCAAGTTTCCCAAGATCTTAACTCCGTCTGAAGACAATACAAAAAAAAAAAAACCCGTCATGATTCAATGTATAATTAATTTTGAGTGTACATAACGCTATGGTTAGAAATCTCTTTGTTGCTAGCTGTTCTCAGCAGCTTGTGCTGCTACCGGTTGTTTCATTTGTTTGTGTTCGCGGTGAATAACACATTTTCTACCCATTTTATAATGT-AACTTTGCACCCACTGTACCTGTATATCACCTGAGGAACATTAATAACACATCAATTTTTTTCAAAAAAAAAAAAAGAAA]
[+] EMBL AK102538 [GCGTCCAGCCCCCCAGATGAACAAACAACAGCAAACCAAGCGCGACGCGAGACGGAAATGGGGCGGAGAGAGTAGCGCGTAACCCGCAAGCTCCACGCCACCACCACCCTCCCCGAATCCAATCCAAGCCCTAGCGCCAACCGCCGCCGACGAGGACGCCAAATCCCTCGATCTCCTCCTCCTCCTCCGCCTTCCGCCCCCCCAAAACCCTAGCCCCGGCGGGAGGAGGCGGCGGCGGCGGCGGGGGTGCAGATCTTAGGATGTCGGACTCCGCGTCCATGGCCGCCGCCATCGAGGCGCGGTTCAGCGGCCGCGACCTCATCGGCCGCGGCTCCTTCGGCGACGTCTACAAAGGGTTTGACAAGGAACTGCATAAGGAAGTTGCAATAAAAGTTATCGATTTAGAAGAAGCTGAGGATGACATTGAAGACATCCAAAAGGAGATATCTGTTTTGTCACAATGCCGTTGTCCATATATAACTGACTATTATGGCTCATATCTTCATCAAACGAAACTGTGGATAGTAATGGAATATATGGCTGGTGGTTCTGTCGCTGACCTACTCCAAACTGGCCCTCCTCTAGATGAATTGTCTATTGCATGCATTCTGAGGGACTTGTTACATGCAGTTGAATATCTTCATTCAGAAGGAAAGATTCACCGTGACATTAAAGCGGCAAATATCCTCCTGACTGAAAGTGGAGATGTGAAGGTTGCAGACTTTGGTGTTTCTGCGCAGCTGACTAAAACAATGTCAAGGAGAAAGACATTTGTTGGAACTCCCTTTTGGATGGCACCTGAGGTTATTCAAAACTCTGACGGGTACAATGAAAAGGCAGATATCTGGTCGTTAGGTATAACTGCTATTGAAATGGCAAAAGGTGAACCCCCTTTGGCAGATATCCATCCCATGAGAGTTCTTTTCATGATACCTCGTGAAAATCCTCCTCAGCTTGATGAGCATTTCTCTAAACCGATGAAGGAGTTTGTGTCACTATGTTTAAAGAAGAATCCAGCAGAGAGGCTAAGTGCCAAGGATCTTCTTAAGCACCGCTTTGTAAGAAATGCTAGAAAATCTCCAAAGCTTCTGGATAGAATAAGAGAGCGACCGAAGTTTCCAGTAAAAAGCAGTGCGGATGCCACACAAAATGGTCGAACACATGTTGAAGAAGATGATGGTACTGGTACTATCAAGGTTGAGAGGGCTACAAGGGATGTAGTCTCTCCTTCAAGTCAAGGAACTGTTAGGAAAGCTGCTGGCTGGAATCTTCCAGACAGATCAGAGGGCACAGGAACTGTTCGAGGTGGTTTAAAGCCATCACAAGTCACCTCCACCAAGGATAGTAGATCCGATGCTTCTCATAGTCCAAACACACCAAAACGTACAGCTGATCGAGAAAATCAATGGAGAACATCATGGACGGGGTCTGAAGAGTCGATCTCAACAAACCCGTCGCAGAGAGATGCACAAAGTGAATATGGAAGACTAGAGAGTTCTACAGAAGATAATGACCAATCTATAAGTGGGTCTGGAACTGTTGTACTGCGCTCGCCAAGAGCATCTCAGGTGTACCCTGCAGCTACTAACCACAGTTCCAAGCCTCCCAGTAGATTCTCCTCGTATGAAGACACGTCTATCAGTGGGACAGTCGTTCGGAATCAAATTGAAGAACCAGAAACTCCACGATCTTCAAGGTCGAGACTGGGAATCCAAGAAAAGTCACCAAATGCTTCACTGGAGGACAGTGCAACTAACCTTGCAGAGGCAAAGGCTGCTCTCCAGGCTGCGTTTAAAAAGGGTAATGCTCGTGAAAGACATGTTATCAGCAAACATGAAAAGGAATCACATGAACCCAGAATTTCGGCAGTAAACAGTCATGATGCCCCAAGTGAGAATGCTGACAT GGAAAAAGGTCGCAAACCA CGCCAGATACATGATGGACAATCAGCTCCTCAAGCTTCTGGTTCTGTATCTTCACCTGCACTCTCGTCATTGATAATTCCTTCTCTAAAAGAGGCTACTGGTGACAAGTTTAACGGACCAGTTGTTCATACATTCCTTGATTCCTTGATGCATCTCGAAAAAGAGCTACCTGGATCTTGTGAGGTGCTGATTGGCAGAATGCTCCATCGGCTAGGGAGCTCGAAGGAGTCCTCGCTGCAAAGTCTTCAAGAGACGGCGACATCAGTTTTCGCAAAGAAATCTGAACCTCCCTCTGAACCT CCAAGTAACAAGAAAATGGCTAATACACCTTCCTTGGCTGCCCCTACCGTAAGCCCTTTGGCGAGGTTCCTTCTTACAAGGTGGCAAAACCAAGTTTCCCAAGATCTTAACTCCGTCTGAAGACAATACAAAAAAAAAAAAACCCGTCATGATTCAATGTATAATTAATTTTGAGTGTACATAACGCTATGGTTAGAAATCTCTTTGTTGCTAGCTGTTCTCAGCAGCTTGTGCTGCTACCGGTTGTTTCATTTGTTTGTGTTCGCGGTGAATAACACATTTTCTACCCATTTTATAATGT AACTTTGCACCCACTGTACCTGTATATCACCTGAGGAACATTAATAACACATCA ]
[+] EMBL CF307148 [ AACTGTTGTACTGCGCTCGCCAAGAGCATCTCAGGTGTACCCTGCAGCTACTAACCACAGTTCCAAGCCTCCCAGTAGATTCTCCTCGTATGAAGACACGTCTATCAGTGGGACAGTCGTTCGGAATCAAATTGAAGAACCAGAAACTCCACGATCTTCAAGGTCGAGACTGGGAATCCAAGAAAAGTCACCAAATGCTTCACTGGAGGACAGTGCAACTAACCTTGCAGAGGCAAAGGCTGCTCTCCAGGCTGCGTTTAAAAAGGGTAATGCTCGTGAAAGACATGTTATCAGCAAACATGAAAAGGAATCACATGAACCCAGAATTTCGGCAGTAAACAGTCATGATGCCCCAAGTGAGAATGCTGACAT GGAAAAAGGTCGCAAACCA CGCCAGATACATGATGGACAATCAGCTCCTCAAGCTTCTGGTTCTGTATCTTCACCTGCACTCTCGTCATTGATAATTCCTTCTCTAAAAGAGGCTACTGGTGACAAGTTTAACGGACCAGTTGTTCATACATTCCTTGATTCCTTGATGCATCTCGAAAAAGAGCTACCTGGATCTTGTGAGGTGCTGATTGGCAGAATGCTCCATCGGTTAGGGAGCTCGAAGGAG ]
[-] EMBL CB658200 [ TATCAGTGGGACAGTCGTTCGGAATCAAATCGAAGAACCAGAAACTCCACGATCTTCAAGGTCGAGACTGGGAATCCAAGAAAAGTCACCAAATGCTTCACTGGAGGACAGTGCAACTAACCTTGCAGAGGCAAAGGCTGCTCTCCAGGCTGCGTTTAAAAAGGGTAATGCTCGTGAAAGACATGTTATCAGCAAACATGAAAAGGAATCACATGAACCCAGAATTTCGGCAGTAAACAGTCATGATGCCCCAAGTGAGAATGCTGACAT GGAAAAAGGTCGCAAACCA CGCCAGATACATGATGGACAATCAGCTCCTCAAGCTTATGGTTCTGTATCTTCACCTGCACTCTCGTCATTGATAATTCCTTCTCTAAAAGAGGCTACTGGTGACAAGTTTAACGGACCAGTTGTTCATACATTCCTTGATTCCTTGATGCATCTCGAAAAAGAGCTACCTGGATCTTGTGAGGTGCTGATTGGCAGAATGCTCCATCGGCTAGGGAGCTCGAAGGAGTCCTCGCTGCAAAGTCTTCAAGAGACGGCGACATCAGTTTTGGCAAAGAAATCTGAACCTCCCTGTGAACCT CCAAGTAACAAGAAAATGGCTAATACACCTTCCTTGGCTGCCCCTACCGTAAGCCCTTTGGCGAGGTTCCTTCTTACAAGGTGGCAAAACCAAGTTTCCCAAGATCTTAACTCCGTCTGAAGACAATACAAAAAAAAgg ]
[+] EMBL AU030933 [ CTGACATGGGAAAAAGGTCGCAAACCA CGCCAGATACNTGATGGACAATCAGCTCCTCAAGCTTCTGGTTCTGTATCTTCACCTGCACTCTCGNCATTGATAATTCCTTCTCTAAAAGAGGCTACTGGTGACAAGTTTAACGGACCAGTTGTTCATACNTTCCTTGATTCCTTGATGCATCTCGAAAAAGAGCTACCTGGATCTTGTGAGGTGCTGATTGGCAGAATGCTCCATCGGCTAGGGAGCTCGAAGGAGTCCTCGCTGCAAAGTCTTCAAGAGACGGCGACATCAGTTTTCGCAAAGAAATCTGAACCTCCCTCTGAACCTCCCAAGTAACAAGAAAATGGCTAATACACCTTCCTTGGCTGCCCCTACCGTAAGCCCTTTGGCGAGGTTCCTTCTTACAAGGTGGCAAAACCAAGTTTCCCAAGATCTTAACTCCGTCTGAAGACAATACAAAAAAAAAAAAACCCGTCATGATTCAATGTATAATTAATTTTGAGTGTACATAACGCTATGGTTAGAAATCTCTTTGTTGCTAGCTGTTCTCA NAGCTTGTGCTGCTACCGGTTGTTTCATTTGTTTGTGTTCGCGGTGAATAACACATTTTCTACCCATTTTATAATGT AACTTTGCACCCACTGTACCTGTATATCACCTGAGGAACATTAATAACACATCAATTTTTTTCAAAAA ]
[-] EMBL CA762241 [ TCGCAAACCACCGCCAGATACATGATGGACAATCAGCTCCTCAAGCTTCTGGTTCTGTATCTTCACCTGCACTCTCGTCATTGATAATTCCTTTTCTAAAAGAGGCTACTGGTGACAAGTTTAACGGACCAGTTGTTCATACATTCCTTGATTCCTTGATGCATCTCGAAAAAGAGCTACCTGGATCTTGTGAGGTGCTGATTGGCAGAATGCTCCATCGGCTAGGGAGCTCGAAGGAGTCCTCGCTGCAAAGTCTTCAAGAGACGGCGACATCAGTTTTCGCAAAGAAATCTGAACCTCCCTCTGAACCT CCAAGTAACAAGAAAATGGCTAATACACCTTCCTTGGCTGCCCCTACCGTAAGCCCTTTGGCGAGGTTCCTTCTTACAAGGTGGCAAAACCAAGTTTCCCAAGATTTTAACTCCGTCTGAAGACAATAC AAAAAAAAAAAACCCGTCATGATTCAATGTATAATTAATTTTGAGTGTACATAACGCTATGGTTAGAAATCTCTTTGTTGCTAGCTGTTCTCAGCAGCTTGTGCTGCTACCGGTTGTTTCATTTGTTTGTGTTCGCGGTGAATAACACATTTTCTACCCATTTTATAATGTAAACTTTGCACCCACTGTACCTGTATATCACCTGAGGAACATTAATAACACATCAATTTTTTTCCAAAAAAAAAAAAGAAA]
consensusID : consensus_13224#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2438 fasta sequence
[ACGGAAATGGGGCGGAGAGAGTAGCGCGTAACCCGCAAGCTCCACGCCACCACCACCCTCCCCGAATCCAATCCAAGCCCTAGCGCCAACCGCCGCCGACGAGGACGCCAAATCCCTCGATCTCCTCCTCCTCCTCCGCCTTCCGCCCCCCCAAAACCCTAGCCCCGGCGGGAGGAGGCGGCGGCGGCGGCGGGGGTGCAGATCTTAGGATGTCGGACTCCGCGTCCATGGCCGCCGCCATCGAGGCGCGGTTCAGCGGCCGCGACCTCATCGGCCGCGGCTCCTTCGGCGACGTCTACAAAGGGTTTGACAAGGAACTGCATAAGGAAGTTGCAATAAAAGTTATCGATTTAGAAGAAGCTGAGGATGACATTGAAGACATCCAAAAGGAGATATCTGTTTTGTCACAATGCCGTTGTCCATATATAACTGACTATTATGGCTCATATCTTCATCAAACGAAACTGTGGATAGTAATGGAATATATGGCTGGTGGTTCTGTCGCTGACCTACTCCAAACTGGCCCTCCTCTAGATGAATTGTCTATTGCATGCATTCTGAGGGACTTGTTACATGCAGTTGAATATCTTCATTCAGAAGGAAAGATTCACCGTGACATTAAAGCGGCAAATATCCTCCTGACTGAAAGTGGAGATGTGAAGGTTGCAGACTTTGGTGTTTCTGCGCAGCTGACTAAAACAATGTCAAGGAGAAAGACATTTGTTGGAACTCCCTTTTGGATGGCACCTGAGGTTATTCAAAACTCTGACGGGTACAATGAAAAGGCAGATATCTGGTCGTTAGGTATAACTGCTATTGAAATGGCAAAAGGTGAACCCCCTTTGGCAGATATCCATCCCATGAGAGTTCTTTTCATGATACCTCGTGAAAATCCTCCTCAGCTTGATGAGCATTTCTCTAAACCGATGAAGGAGTTTGTGTCACTATGTTTAAAGAAGAATCCAGCAGAGAGGCTAAGTGCCAAGGATCTTCTTAAGCACCGCTTTGTAAGAAATGCTAGAAAATCTCCAAAGCTTCTGGATAGAATAAGAGAGCGACCGAAGTTTCCAGTAAAAAGCAGTGCGGATGCCACACAAAATGGTCGAACACATGTTGAAGAAGATGATGGTACTGGTACTATCAAGGTTGAGAGGGCTACAAGGGATGTAGTCTCTCCTTCAAGTCAAGGAACTGTTAGGAAAGCTGCTGGCTGGAATCTTCCAGACAGATCAGAGGGCACAGGAACTGTTCGAGGTGGTTTAAAGCCATCACAAGTCACCTCCACCAAGGATAGTAGATCCGATGCTTCTCATAGTCCAAACACACCAAAACGTACAGCTGATCGAGAAAATCAATGGAGAACATCATGGACGGGGTCTGAAGAGTCGATCTCAACAAACCCGTCGCAGAGAGATGCACAAAGTGAATATGGAAGACTAGAGAGTTCTACAGAAGATAATGACCAATCTATAAGTGGGTCTGGAACTGTTGTACTGCGCTCGCCAAGAGCATCTCAGGTGTACCCTGCAGCTACTAACCACAGTTCCAAGCCTCCCAGTAGATTCTCCTCGTATGAAGACACGTCTATCAGTGGGACAGTCGTTCGGAATCAAATTGAAGAACCAGAAACTCCACGATCTTCAAGGTCGAGACTGGGAATCCAAGAAAAGTCACCAAATGCTTCACTGGAGGACAGTGCAACTAACCTTGCAGAGGCAAAGGCTGCTCTCCAGGCTGCGTTTAAAAAGGGTAATGCTCGTGAAAGACATGTTATCAGCAAACATGAAAAGGAATCACATGAACCCAGAATTTCGGCAGTAAACAGTCATGATGCCCCAAGTGAGAATGCTGACATGGAAAAAGGTCGCAAACCACGCCAGGTACATGATGGACAATCAGCTCCTCAAGCTTCTGGTTCTGTATCTTCACCTGCACTCTCGTCATTGATAATTCCTTCTCTAAAAGAGGCTACTGGTGACAAGTTTAACGGACCAGTTGTTCATACATTCCTTGATTCCTTGATGCATCTCGAAAAAGAGCTACCTGGATCTTGTGAGGTGCTGATTGGCAGAATGCTCCATCGGCTAGGGAGCTCGAAGGAGTCCTCGCTGCAAAGTCTTCAAGAGACGGCGACATCAGTTTTCGCAAAGAAATCTGAACCTCCCTCTGAACCTCCAAGTAACAAGAAAATGGCTAATACACCTTCCTTGGCTGCCCCTACCGTAAGCCCTTTGGCGAGGTTCCTTCTTACAAGGTTTGTTTAGAGAAATTGTTTCCCTTTTCTTATTATTGCTTTCCCACAACAAAGAGTGAGTTGATGCCATTGGTGCAGGTGGCAAAACCAAGTTTCCCAAGATCTTAACTCCGTCTGAAGACAATACAAAAAAAAAAAAACCCGTCATGATTCAATGTATAATTAATTTTGAGTGTACATAACG]
[+] EMBL AK106514 [ACGGAAATGGGGCGGAGAGAGTAGCGCGTAACCCGCAAGCTCCACGCCACCACCACCCTCCCCGAATCCAATCCAAGCCCTAGCGCCAACCGCCGCCGACGAGGACGCCAAATCCCTCGATCTCCTCCTCCTCCTCCGCCTTCCGCCCCCCCAAAACCCTAGCCCCGGCGGGAGGAGGCGGCGGCGGCGGCGGGGGTGCAGATCTTAGGATGTCGGACTCCGCGTCCATGGCCGCCGCCATCGAGGCGCGGTTCAGCGGCCGCGACCTCATCGGCCGCGGCTCCTTCGGCGACGTCTACAAAGGGTTTGACAAGGAACTGCATAAGGAAGTTGCAATAAAAGTTATCGATTTAGAAGAAGCTGAGGATGACATTGAAGACATCCAAAAGGAGATATCTGTTTTGTCACAATGCCGTTGTCCATATATAACTGACTATTATGGCTCATATCTTCATCAAACGAAACTGTGGATAGTAATGGAATATATGGCTGGTGGTTCTGTCGCTGACCTACTCCAAACTGGCCCTCCTCTAGATGAATTGTCTATTGCATGCATTCTGAGGGACTTGTTACATGCAGTTGAATATCTTCATTCAGAAGGAAAGATTCACCGTGACATTAAAGCGGCAAATATCCTCCTGACTGAAAGTGGAGATGTGAAGGTTGCAGACTTTGGTGTTTCTGCGCAGCTGACTAAAACAATGTCAAGGAGAAAGACATTTGTTGGAACTCCCTTTTGGATGGCACCTGAGGTTATTCAAAACTCTGACGGGTACAATGAAAAGGCAGATATCTGGTCGTTAGGTATAACTGCTATTGAAATGGCAAAAGGTGAACCCCCTTTGGCAGATATCCATCCCATGAGAGTTCTTTTCATGATACCTCGTGAAAATCCTCCTCAGCTTGATGAGCATTTCTCTAAACCGATGAAGGAGTTTGTGTCACTATGTTTAAAGAAGAATCCAGCAGAGAGGCTAAGTGCCAAGGATCTTCTTAAGCACCGCTTTGTAAGAAATGCTAGAAAATCTCCAAAGCTTCTGGATAGAATAAGAGAGCGACCGAAGTTTCCAGTAAAAAGCAGTGCGGATGCCACACAAAATGGTCGAACACATGTTGAAGAAGATGATGGTACTGGTACTATCAAGGTTGAGAGGGCTACAAGGGATGTAGTCTCTCCTTCAAGTCAAGGAACTGTTAGGAAAGCTGCTGGCTGGAATCTTCCAGACAGATCAGAGGGCACAGGAACTGTTCGAGGTGGTTTAAAGCCATCACAAGTCACCTCCACCAAGGATAGTAGATCCGATGCTTCTCATAGTCCAAACACACCAAAACGTACAGCTGATCGAGAAAATCAATGGAGAACATCATGGACGGGGTCTGAAGAGTCGATCTCAACAAACCCGTCGCAGAGAGATGCACAAAGTGAATATGGAAGACTAGAGAGTTCTACAGAAGATAATGACCAATCTATAAGTGGGTCTGGAACTGTTGTACTGCGCTCGCCAAGAGCATCTCAGGTGTACCCTGCAGCTACTAACCACAGTTCCAAGCCTCCCAGTAGATTCTCCTCGTATGAAGACACGTCTATCAGTGGGACAGTCGTTCGGAATCAAATTGAAGAACCAGAAACTCCACGATCTTCAAGGTCGAGACTGGGAATCCAAGAAAAGTCACCAAATGCTTCACTGGAGGACAGTGCAACTAACCTTGCAGAGGCAAAGGCTGCTCTCCAGGCTGCGTTTAAAAAGGGTAATGCTCGTGAAAGACATGTTATCAGCAAACATGAAAAGGAATCACATGAACCCAGAATTTCGGCAGTAAACAGTCATGATGCCCCAAGTGAGAATGCTGACATGGAAAAAGGTCGCAAACCACGCCAGGTACATGATGGACAATCAGCTCCTCAAGCTTCTGGTTCTGTATCTTCACCTGCACTCTCGTCATTGATAATTCCTTCTCTAAAAGAGGCTACTGGTGACAAGTTTAACGGACCAGTTGTTCATACATTCCTTGATTCCTTGATGCATCTCGAAAAAGAGCTACCTGGATCTTGTGAGGTGCTGATTGGCAGAATGCTCCATCGGCTAGGGAGCTCGAAGGAGTCCTCGCTGCAAAGTCTTCAAGAGACGGCGACATCAGTTTTCGCAAAGAAATCTGAACCTCCCTCTGAACCTCCAAGTAACAAGAAAATGGCTAATACACCTTCCTTGGCTGCCCCTACCGTAAGCCCTTTGGCGAGGTTCCTTCTTACAAGGTTTGTTTAGAGAAATTGTTTCCCTTTTCTTATTATTGCTTTCCCACAACAAAGAGTGAGTTGATGCCATTGGTGCAGGTGGCAAAACCAAGTTTCCCAAGATCTTAACTCCGTCTGAAGACAATACAAAAAAAAAAAAACCCGTCATGATTCAATGTATAATTAATTTTGAGTGTACATAACG]
[+] EMBL CB658199 [ GTAACCCGCAAGCTCCACGCCACCACCACCCTCCCCGAATCCAATCCAAGCCCTAGCGCCAACCGCCGCCGACGAGGACGCCAAATCCCTCGATCTCCTCCTCCTCCTCCGCCTTCCGCCCCCCCAAAACCCTAGCCCCGGCGGGAGGAGGCGGCGGCGGCGGCGGGGGTGCAGATCTTAGGATGTCGGACTCCGCGTCCATGGCCGCCGCCATCGAGGCGCGGTTCAGCGGCCGCGACCTCATCGGCCGCGGCTCCTTCGGCGACGTCTACAAAGGGTTTGACAAGGAACTGCATAAGGAAGTTGCAATAAAAGTTATCGATTTAGAAGAAGCTGAGGATGACATTGAAGACATCCAAAAGGAGATATCTGTTTTGTCACAATGCCGTTGTCCATATATAACTGACTATTATGGCTCATATCTTCATCAAACGAAACTGTGGATAGTAATGGAATATATGGCTGGTGGTTCTGTCGCTGACCTACTCCAAACTGGCCCTCCTCTAGATGAATTGTCTATTGCATGCATTCTGAGGGACTTGTTACATGCAGTTGAATATCTTCATTCAGAAGGAAAGATTCACCGTGACATTAAAGCGGCAAATATCCTCCTGACTGAAAGTGGAGATGTGAAGGTTGCAGACTTTGGTGTTTCTGCGCAGCTGACTAAAACAATGTCAAGGAGAAAGACA ]
[+] EMBL CF324327 [ GGCCGCGGCTCCTTCGGCGACGTCTACAAAGGGTTTGACAAGGAACTGCATAAGGAAGTTGCAATAAAAGTTATCGATTTAAAAGAAGCTGAGGATGACATTGAAGACATCCAAAAGGAGATATCTGTTTTGTCACAATGCCGTTGTCCATATATAACTGACTATTATGGCTCATATCTTCATCAAACGAAACTGTGGATAGTAATGGAATATATGGCTGGTGGTTCTGTCGCTGACCTACTCCAAACTGGCCCTCCTCTAGATGAATTGTCTATTGCATGCATTCTGAGGGACTTGTTACATGCAGTTGAATATCTTCATTCAGAAGGAAAGATTCACCGTGACATTAAAGCGGCAAATATCCTCCTGACTGAAAGTGGAGATGTGAAGGTTGCAGACTTTGGTGTTTCTGCGCAGCTGACTAAAACAATGTCAAGGAGAAAGACATTTGT ]
[+] EMBL CA755197 [ AGGTTGCAGACTTTGGTGTTTCTGCGCAGCTGACTAATACAATGTCAAGGAGAAAGACATTTGTTGGAACTCCCTTTTGGATGGCACCTGAGGTTATTCAAAACTCTGACGGGTACAATGAAAAGGCAGATATCTGGTCGTTAGGTATAACTGCTATTGAAATGGCAAAAGGTGAACCCCCTTTGGCAGATATCCATCCCATGAGAGTTCTTTTCATGATACCTCGTGAAAATCCTCCTCAGCTTGATGAGCATTTCTCTAAACCGATGAAGGAGTTTGTGTCACTATGTTTAAAGAAGAATCCAGCAGAGAGGCTAAGTGCCTAGGATCTTCTTAAGCACCGCTTTGTAAGAGATGCTAGAAAATCTCCNAAGCTTCTGGATAGAATAAGAGAGCGACCGAAGTTTCCAGTAAAAAGCAGTGCGGATGCCACACAAAATGGTCGAACACATGTTGAAGAAGATGATGGTACTGGTACTATCAAGGTTGAGAGGGCTACNAGGGATGTAGTCTCTCCTTCAAGTCAAGGAACTGTTAGGAAAGCTGCTGGCTGGAATCTTCCAGACAGATCAGAGGGCACAGGAACTGTTCG ]
[+] EMBL CF323894 [ TCAAGGAGAAAGACATTTGTTGGAACTCCCTTTTGGATGGCACCTGAGGTTATTCAAAACTCTGACGGGTACAATGAAAAGGCAGATATCTGGTCGTTAGGTATAACTGCTATTGAAATGGCAAAAGGTGAACCCCCTTTGGCAGATATCCATCCCATGAGAGTTCTTTTCATGATACCTCGTGAAAATCCTCCTCAGCTTGATGAGCATTTCTCTAAACCGATGAAGGAGTTTGTGTCACTATGTTTAAAGAAGAATCCAGCAGAGAGGCTAAGTGCCAAGGATCTTCTTAAGCACCGCTTTGTAAGAAATGCTAGAAAATCTCCAAAGCTTCTGGATAGAATAAGAGAGCGACCGAAGTTTCCAGTAAAAAGCAGTGCGGATGCCACACAAAATGGTCGAACACATGTTGAAGAAGATGATGGTACTGGTACTATCAAGG ]
[+] EMBL CF306366 [ GAATCTTCCAGACAGATCAGAGGGCACAGGAACTGTTCGAGGTGGTTTAAAGCCATCACAAGTCACCTCCACCAAGGATAGTAGATCCGATGCTTCTCATAGTCCAAACACACCAAAACGTACAGCTGATCGAGAAAATCAATGGAGAACATCATGGACGGGGTCTGAAGAGTCGATCTCAACAAACCCGTCGCAGAGAGATGCACAAAGTGAATATGGAAGACTAGAGAGTTCTACAGAAGATAATGACCAATCTATAAGTGGGTCTGGAACTGTTGTACTGCGCTCGCCAAGAGCATCTCAGGTGTACCCTGCAGCTACTAACCACAGTTCCAAGCCTCCCAGTAGATTCTCCTCGTATGAAGACACGTCTATCAGTGGGACAGTCGTTCGGAATCAAATTGAAGAACCAGAAACTCCACGATCTTCAAGGTCGAGACTGGGAATCCAAGAAAAGTCACCAAATGCTTCACTGGAGGACAGTGCAACTAACCTTGCAGAGGCAAAGGCTGCT ]
[+] EMBL AU162322 [ ACCTCCACCAAGGATAGTAGATCCGATGCTTCTCATAGTCCAAACACACCAAAACGTACAGCTGATCGAGAAAATCAATGGAGAACATCATGGACGGGGTCTGAAGAGTCGATCTCAACAAACCCGTCGCAGAGAGATGCACAAAGTGAATATGGAAGACTAGAGAGTTCTACAGAAGATAATGACCAATCTATAAGTGGGTCTGGAACTGTTGTACTGCGCTCGCCAAGAGCATCTCAGGTGTACCCTGCAGCTACTAACCACAGTTCCAAGCCTCCCAGTAGATTCTCCTCGTATGAAGACACGTCTATCAGTGGGACAGTCGTTCGGNATCAAATTGAAGAACCAG AACTCCACGATCTTC ANGTCGAG CTGGGGATCCAAG AAAGTC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13224#0 GCGTCCAGCCCCCCAGATGAACAAACAACAGCAAACCAAGCGCGACGCGAGACGGAAATG 60
consensus_13224#1 ---------------------------------------------------ACGGAAATG 9
*********
consensus_13224#0 GGGCGGAGAGAGTAGCGCGTAACCCGCAAGCTCCACGCCACCACCACCCTCCCCGAATCC 120
consensus_13224#1 GGGCGGAGAGAGTAGCGCGTAACCCGCAAGCTCCACGCCACCACCACCCTCCCCGAATCC 69
************************************************************
consensus_13224#0 AATCCAAGCCCTAGCGCCAACCGCCGCCGACGAGGACGCCAAATCCCTCGATCTCCTCCT 180
consensus_13224#1 AATCCAAGCCCTAGCGCCAACCGCCGCCGACGAGGACGCCAAATCCCTCGATCTCCTCCT 129
************************************************************
consensus_13224#0 CCTCCTCCGCCTTCCGCCCCCCCAAAACCCTAGCCCCGGCGGGAGGAGGCGGCGGCGGCG 240
consensus_13224#1 CCTCCTCCGCCTTCCGCCCCCCCAAAACCCTAGCCCCGGCGGGAGGAGGCGGCGGCGGCG 189
************************************************************
consensus_13224#0 GCGGGGGTGCAGATCTTAGGATGTCGGACTCCGCGTCCATGGCCGCCGCCATCGAGGCGC 300
consensus_13224#1 GCGGGGGTGCAGATCTTAGGATGTCGGACTCCGCGTCCATGGCCGCCGCCATCGAGGCGC 249
************************************************************
consensus_13224#0 GGTTCAGCGGCCGCGACCTCATCGGCCGCGGCTCCTTCGGCGACGTCTACAAAGGGTTTG 360
consensus_13224#1 GGTTCAGCGGCCGCGACCTCATCGGCCGCGGCTCCTTCGGCGACGTCTACAAAGGGTTTG 309
************************************************************
consensus_13224#0 ACAAGGAACTGCATAAGGAAGTTGCAATAAAAGTTATCGATTTAGAAGAAGCTGAGGATG 420
consensus_13224#1 ACAAGGAACTGCATAAGGAAGTTGCAATAAAAGTTATCGATTTAGAAGAAGCTGAGGATG 369
************************************************************
consensus_13224#0 ACATTGAAGACATCCAAAAGGAGATATCTGTTTTGTCACAATGCCGTTGTCCATATATAA 480
consensus_13224#1 ACATTGAAGACATCCAAAAGGAGATATCTGTTTTGTCACAATGCCGTTGTCCATATATAA 429
************************************************************
consensus_13224#0 CTGACTATTATGGCTCATATCTTCATCAAACGAAACTGTGGATAGTAATGGAATATATGG 540
consensus_13224#1 CTGACTATTATGGCTCATATCTTCATCAAACGAAACTGTGGATAGTAATGGAATATATGG 489
************************************************************
consensus_13224#0 CTGGTGGTTCTGTCGCTGACCTACTCCAAACTGGCCCTCCTCTAGATGAATTGTCTATTG 600
consensus_13224#1 CTGGTGGTTCTGTCGCTGACCTACTCCAAACTGGCCCTCCTCTAGATGAATTGTCTATTG 549
************************************************************
consensus_13224#0 CATGCATTCTGAGGGACTTGTTACATGCAGTTGAATATCTTCATTCAGAAGGAAAGATTC 660
consensus_13224#1 CATGCATTCTGAGGGACTTGTTACATGCAGTTGAATATCTTCATTCAGAAGGAAAGATTC 609
************************************************************
consensus_13224#0 ACCGTGACATTAAAGCGGCAAATATCCTCCTGACTGAAAGTGGAGATGTGAAGGTTGCAG 720
consensus_13224#1 ACCGTGACATTAAAGCGGCAAATATCCTCCTGACTGAAAGTGGAGATGTGAAGGTTGCAG 669
************************************************************
consensus_13224#0 ACTTTGGTGTTTCTGCGCAGCTGACTAAAACAATGTCAAGGAGAAAGACATTTGTTGGAA 780
consensus_13224#1 ACTTTGGTGTTTCTGCGCAGCTGACTAAAACAATGTCAAGGAGAAAGACATTTGTTGGAA 729
************************************************************
consensus_13224#0 CTCCCTTTTGGATGGCACCTGAGGTTATTCAAAACTCTGACGGGTACAATGAAAAGGCAG 840
consensus_13224#1 CTCCCTTTTGGATGGCACCTGAGGTTATTCAAAACTCTGACGGGTACAATGAAAAGGCAG 789
************************************************************
consensus_13224#0 ATATCTGGTCGTTAGGTATAACTGCTATTGAAATGGCAAAAGGTGAACCCCCTTTGGCAG 900
consensus_13224#1 ATATCTGGTCGTTAGGTATAACTGCTATTGAAATGGCAAAAGGTGAACCCCCTTTGGCAG 849
************************************************************
consensus_13224#0 ATATCCATCCCATGAGAGTTCTTTTCATGATACCTCGTGAAAATCCTCCTCAGCTTGATG 960
consensus_13224#1 ATATCCATCCCATGAGAGTTCTTTTCATGATACCTCGTGAAAATCCTCCTCAGCTTGATG 909
************************************************************
consensus_13224#0 AGCATTTCTCTAAACCGATGAAGGAGTTTGTGTCACTATGTTTAAAGAAGAATCCAGCAG 1020
consensus_13224#1 AGCATTTCTCTAAACCGATGAAGGAGTTTGTGTCACTATGTTTAAAGAAGAATCCAGCAG 969
************************************************************
consensus_13224#0 AGAGGCTAAGTGCCAAGGATCTTCTTAAGCACCGCTTTGTAAGAAATGCTAGAAAATCTC 1080
consensus_13224#1 AGAGGCTAAGTGCCAAGGATCTTCTTAAGCACCGCTTTGTAAGAAATGCTAGAAAATCTC 1029
************************************************************
consensus_13224#0 CAAAGCTTCTGGATAGAATAAGAGAGCGACCGAAGTTTCCAGTAAAAAGCAGTGCGGATG 1140
consensus_13224#1 CAAAGCTTCTGGATAGAATAAGAGAGCGACCGAAGTTTCCAGTAAAAAGCAGTGCGGATG 1089
************************************************************
consensus_13224#0 CCACACAAAATGGTCGAACACATGTTGAAGAAGATGATGGTACTGGTACTATCAAGGTTG 1200
consensus_13224#1 CCACACAAAATGGTCGAACACATGTTGAAGAAGATGATGGTACTGGTACTATCAAGGTTG 1149
************************************************************
consensus_13224#0 AGAGGGCTACAAGGGATGTAGTCTCTCCTTCAAGTCAAGGAACTGTTAGGAAAGCTGCTG 1260
consensus_13224#1 AGAGGGCTACAAGGGATGTAGTCTCTCCTTCAAGTCAAGGAACTGTTAGGAAAGCTGCTG 1209
************************************************************
consensus_13224#0 GCTGGAATCTTCCAGACAGATCAGAGGGCACAGGAACTGTTCGAGGTGGTTTAAAGCCAT 1320
consensus_13224#1 GCTGGAATCTTCCAGACAGATCAGAGGGCACAGGAACTGTTCGAGGTGGTTTAAAGCCAT 1269
************************************************************
consensus_13224#0 CACAAGTCACCTCCACCAAGGATAGTAGATCCGATGCTTCTCATAGTCCAAACACACCAA 1380
consensus_13224#1 CACAAGTCACCTCCACCAAGGATAGTAGATCCGATGCTTCTCATAGTCCAAACACACCAA 1329
************************************************************
consensus_13224#0 AACGTACAGCTGATCGAGAAAATCAATGGAGAACATCATGGACGGGGTCTGAAGAGTCGA 1440
consensus_13224#1 AACGTACAGCTGATCGAGAAAATCAATGGAGAACATCATGGACGGGGTCTGAAGAGTCGA 1389
************************************************************
consensus_13224#0 TCTCAACAAACCCGTCGCAGAGAGATGCACAAAGTGAATATGGAAGACTAGAGAGTTCTA 1500
consensus_13224#1 TCTCAACAAACCCGTCGCAGAGAGATGCACAAAGTGAATATGGAAGACTAGAGAGTTCTA 1449
************************************************************
consensus_13224#0 CAGAAGATAATGACCAATCTATAAGTGGGTCTGGAACTGTTGTACTGCGCTCGCCAAGAG 1560
consensus_13224#1 CAGAAGATAATGACCAATCTATAAGTGGGTCTGGAACTGTTGTACTGCGCTCGCCAAGAG 1509
************************************************************
consensus_13224#0 CATCTCAGGTGTACCCTGCAGCTACTAACCACAGTTCCAAGCCTCCCAGTAGATTCTCCT 1620
consensus_13224#1 CATCTCAGGTGTACCCTGCAGCTACTAACCACAGTTCCAAGCCTCCCAGTAGATTCTCCT 1569
************************************************************
consensus_13224#0 CGTATGAAGACACGTCTATCAGTGGGACAGTCGTTCGGAATCAAATTGAAGAACCAGAAA 1680
consensus_13224#1 CGTATGAAGACACGTCTATCAGTGGGACAGTCGTTCGGAATCAAATTGAAGAACCAGAAA 1629
************************************************************
consensus_13224#0 CTCCACGATCTTCAAGGTCGAGACTGGGAATCCAAGAAAAGTCACCAAATGCTTCACTGG 1740
consensus_13224#1 CTCCACGATCTTCAAGGTCGAGACTGGGAATCCAAGAAAAGTCACCAAATGCTTCACTGG 1689
************************************************************
consensus_13224#0 AGGACAGTGCAACTAACCTTGCAGAGGCAAAGGCTGCTCTCCAGGCTGCGTTTAAAAAGG 1800
consensus_13224#1 AGGACAGTGCAACTAACCTTGCAGAGGCAAAGGCTGCTCTCCAGGCTGCGTTTAAAAAGG 1749
************************************************************
consensus_13224#0 GTAATGCTCGTGAAAGACATGTTATCAGCAAACATGAAAAGGAATCACATGAACCCAGAA 1860
consensus_13224#1 GTAATGCTCGTGAAAGACATGTTATCAGCAAACATGAAAAGGAATCACATGAACCCAGAA 1809
************************************************************
consensus_13224#0 TTTCGGCAGTAAACAGTCATGATGCCCCAAGTGAGAATGCTGACATGGAAAAAGGTCGCA 1920
consensus_13224#1 TTTCGGCAGTAAACAGTCATGATGCCCCAAGTGAGAATGCTGACATGGAAAAAGGTCGCA 1869
************************************************************
consensus_13224#0 AACCACGCCAGATACATGATGGACAATCAGCTCCTCAAGCTTCTGGTTCTGTATCTTCAC 1980
consensus_13224#1 AACCACGCCAGGTACATGATGGACAATCAGCTCCTCAAGCTTCTGGTTCTGTATCTTCAC 1929
*********** ************************************************
consensus_13224#0 CTGCACTCTCGTCATTGATAATTCCTTCTCTAAAAGAGGCTACTGGTGACAAGTTTAACG 2040
consensus_13224#1 CTGCACTCTCGTCATTGATAATTCCTTCTCTAAAAGAGGCTACTGGTGACAAGTTTAACG 1989
************************************************************
consensus_13224#0 GACCAGTTGTTCATACATTCCTTGATTCCTTGATGCATCTCGAAAAAGAGCTACCTGGAT 2100
consensus_13224#1 GACCAGTTGTTCATACATTCCTTGATTCCTTGATGCATCTCGAAAAAGAGCTACCTGGAT 2049
************************************************************
consensus_13224#0 CTTGTGAGGTGCTGATTGGCAGAATGCTCCATCGGCTAGGGAGCTCGAAGGAGTCCTCGC 2160
consensus_13224#1 CTTGTGAGGTGCTGATTGGCAGAATGCTCCATCGGCTAGGGAGCTCGAAGGAGTCCTCGC 2109
************************************************************
consensus_13224#0 TGCAAAGTCTTCAAGAGACGGCGACATCAGTTTTCGCAAAGAAATCTGAACCTCCCTCTG 2220
consensus_13224#1 TGCAAAGTCTTCAAGAGACGGCGACATCAGTTTTCGCAAAGAAATCTGAACCTCCCTCTG 2169
************************************************************
consensus_13224#0 AACCTCCAAGTAACAAGAAAATGGCTAATACACCTTCCTTGGCTGCCCCTACCGTAAGCC 2280
consensus_13224#1 AACCTCCAAGTAACAAGAAAATGGCTAATACACCTTCCTTGGCTGCCCCTACCGTAAGCC 2229
************************************************************
consensus_13224#0 CTTTGGCGAGGTTCCTTCTTACAAGGT--GGCAAAACCAAGT-TTCCCAAGATCTTAACT 2337
consensus_13224#1 CTTTGGCGAGGTTCCTTCTTACAAGGTTTGTTTAGAGAAATTGTTTCCCTTTTCTTATTA 2289
*************************** * * * ** * ** ** *****
consensus_13224#0 CCGTCTGAAGACAATACAAAAAAAAAAAAACCCGTCATGATTCAATGTATAATTAATTTT 2397
consensus_13224#1 TTGCTTTCCCACAACAAAGAGTGAGTTGATGCCATTGGTGCAGGTGGCAAAACCAAGTTT 2349
* * **** * * * * * ** * * * ** ** ***
consensus_13224#0 GAGTGTACATAACGCTATGGTTAGAAATCTCTTTGTTGCTAGCTGTTCTCAGCAGCTTGT 2457
consensus_13224#1 CCCAAGATCTTA-ACTCCGTCTGAAGAC------AATACAAAAAAAAAAAAACCCGTCAT 2402
* * * ** * * * * * * * * * * *
consensus_13224#0 GCTGCTACCGGTTGTTTCATTTGTTTGTGTTCGCGGTGAATAACACATTTTCTACCCATT 2517
consensus_13224#1 GATTCAATGTATAATT--AATTTTGAGTGTACATAACG---------------------- 2438
* * * * * ** * ** * **** * *
consensus_13224#0 TTATAATGTAACTTTGCACCCACTGTACCTGTATATCACCTGAGGAACATTAATAACACA 2577
consensus_13224#1 ------------------------------------------------------------
consensus_13224#0 TCAATTTTTTTCAAAAAAAAAAAAAGAAA 2606
consensus_13224#1 -----------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||