These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13234#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1742 fasta sequence [GCCCAAGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGAACATCTTGACTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTCGTAAAGCCGCAGTGAGTTATCATTGCAGATCCAGAATATATTCTCTTTGTAGATTGCAGAATGCTTGAACTCTAGTTTCTTATTTCGATTTAAATCAAATGTGAAGCATGCCTGAGTTATTCATATAGTTAGTTCAGATGCTGAACACACTGGCCTTTATAGAACCTTTTAGACCAACTCACTTTTAGCATTACCTAACACTGGAACCTTATGCTGTTATTATGCTGTGTGGAATGATCATATTCTATCAGGCACTGCCAAGTTCTAATTAATCTTTTTTTAATGAATACCTGTGTTTGGAACTTTGTATGCCTGTATGCGGTATGTGAATAGCCGCAAGCAGATACCTTTATGAGAAGTTTTGTTTTATGCTTTATCTTTCTAACAGATTATGGCTCTCGCACCAAAAATGGTTTATTTTAAACAAGCCAGGTAATTTACCCTAAGTATGTTCAGCACATGCTGGTTACTAATTACTATGATTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTATTCAACACCATTTTTGGCAATTTTCCTACTCTTGAAGAATATGTTTCCAACATCAACTAAAAAA] [+] EMBL AK073304 [GCCCAAGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGAACATCTTGACTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTCGTAAAGCCGCAGTGAGTTATCATTGCAGATCCAGAATATATTCTCTTTGTAGATTGCAGAATGCTTGAACTCTAGTTTCTTATTTCGATTTAAATCAAATGTGAAGCATGCCTGAGTTATTCATATAGTTAGTTCAGATGCTGAACACACTGGCCTTTATAGAACCTTTTAGACCAACTCACTTTTAGCATTACCTAACACTGGAACCTTATGCTGTTATTATGCTGTGTGGAATGATCATATTCTATCAGGCACTGCCAAGTTCTAATTAATCTTTTTTTAATGAATACCTGTGTTTGGAACTTTGTATGCCTGTATGCGGTATGTGAATAGCCGCAAGCAGATACCTTTATGAGAAGTTTTGTTTTATGCTTTATCTTTCTAACAGATTATGGCTCTCGCACCAAAAATGGTTTATTTTAAACAAGCCAGGTAATTTACCCTAAGTATGTTCAGCACATGCTGGTTACTAATTACTATGATTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTTTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAA ] [+] EMBL CF303499 [ TTCGATCCATCCCGCTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTTGTAAAGCCGCAGTGAGTTATCATTGCAGAACCA TANATATTCTCTTTGTAGATTGCAGAATGCTTGAACTCTAGTTTCTTATTTCGATTTAAATCAAATGTGAAGCATGCCTGAGTTATTCATATAGTTAGTTCAGATGCTGAACACACTGGCCTTTATAGAACCTTTTAGACCAACTCACTTTTAGCATTACCTAACACTGGAACCTTATGCTGTTATTATGCTGTGTGGAATGATCATATTCTATCAGGCACTGCCAAGTTCTAATTAATCTTTTTTTAATGAATACCTGTGTTTGGAACTTTGTATGCCTGTATGCGGTATGTGAATAGCCGTAAGCAGATACCTTTATGAGAAGTTCTGTTTTATGCTTTATCTTTCTGACAGATTATGGCTCTCGCAC ] [-] EMBL CB669253 [ TTATTTTAACCAAGCCAGGTAATTTCCCCTAAGTATGTTCAGCCCATGCTGGTTACTAATTACTAGGATTTTGGCAGACCCAAAATAGTGATTGTCGAAGGCAATTATTTATTTCTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATGGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCCCCCCAGGAAAAGAGCCAGATGTAGCACCATGGCGGATTTCGTATAATGCCCGGCCAACCGCGGAGCTTATCATGAAGTCAAAAAAGTCGGCAGATCTTGTAATCAGATCGGGGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGGTGATTAGATATCTGCTTTAATAATGTTCAGAGAAAGCCACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATTTCTCCATGGGGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTCCAGTCGATGAGGAATAACTTATTCAACACCATTTTTGG ] [+] EMBL AU173172 [ TATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTATTCAACAACATTCTCTGCAATTTTCCTACTCTTGAAGAATATGTTTCCAACATCAACTAAAAAA] consensusID : consensus_13234#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1241 fasta sequence [TGAATCCCCACCCGTTTAGCAAATAAAAAAAATCCCAAAAGCCCAAGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGC-TGAGCACCTTTTTTCTGTTTTGAA-GAACA-TTG-AACATCTTGACTCAAAATACATTGTTGGTA-TAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTTGTAAAGCCGCAACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTAAAA] [+] EMBL AK059928 [TGAATCCCCACCCGTTTAGCAAATAAAAAAAATCCCAAAAGCCCAAGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGC TGAGCACCTTTTTTCTGTTTTGAA GAACA TTG AACATCTTGACTCAAAATACATTGTTGGTA TAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTTGTAAAGCCGCAACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTT ] [+] EMBL CF311423 [ GCCC AGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGC TGAGCACCTTTTTTCTGTTTTGAA GAACA TTG AACATCTTGACTCAAAATACATTGTTGGTA TAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACA ] [+] EMBL AU068163 [ CAAGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGCTTGAGCACCTTTTTTCTGTTTTNAAGGANCATTTGAAACATCTTGACTCAAAATACATTGTTGGTATTAGCTGGACCACCTGGCGCGGGga ] [+] EMBL CF323807 [ GCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGC TGAGCACCTTTTTTCTGTTTTGAA GAACA TTG AACATCTTGACTCAAAATACATTGTTGGTA TAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTAT ] [-] EMBL CF311424 [ TTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTTGTAAAGCCGCAACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGTAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTTCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAAAAAAAAA] consensusID : consensus_13234#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence [TGCCTGGTATGCGGTATGTGAATAGCCGCAAGCAGATACCTTTATGAGAAGTTTTGTTTTATGCTTTATCTTTCTAACCAGATTATGGCTCTCGCACCAAAAATGGTTTATTTTAAACAAGCCAGGTAATTTACCCTAAGTATGTTCAGCACATGCTGGTTACTAATTACTATGATTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTATTCAACAACATTCTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU068162 [TGCCTGGTATGCGGTATGTGAATAGCCGCAAGCAGATACCTTTATGAGAAGTTTTGTTTTATGCTTTATCTTTCTAACCAGATTATGGCTCTCGCACCAAAAATGGTTTATTTTAAACAAGCCAGGTAATTTACCCTAAGTATGTTCAGCACATGCTGGTTACTAATTACTATGATTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTATTCAACAACATTCTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_13234#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 690 fasta sequence [ATTGGCAGCCCAACGACGNCGACGNCGNCGNCGACGACGACGNCGANTGGCGNCGGCGNCGNTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTNNCCTACCACCACGAGGAGGAGCAAACCGNCGNCGNTGAAGATGATGATGGCGCTTTGCCCTACCANCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGNCATANTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGAACATCTTGACTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGNNNNNNNNNNGTTCAGTTTATGCTCCATCATTTGATCATGNNNNTGGTGA] [+] EMBL OSR15731B [ATTGGCAGCCCAACGACGNCGACGNCGNCGNCGACGACGACGNCGANTGGCGNCGGCGNCGNTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTNNCCTACCACCACGAGGAGGAGCAAACCGNCGNCGNTGAAGATGATGATGGCGCTTTGCCCTACCANCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGNCATANTGAACAA ] [+] EMBL CF196666 [ CTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGAACATCTTGACTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGNNNNNNNNNNGTTCAGTTTATGCTCCATCATTTGATCATGNNNNTGGTGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13234#1 TGAATCCCCACCCGTTTAGCAAATAAAAAAAATCCCAAAAGCCCAAGGGCCCGAATTGGC 60 consensus_13234#3 ------------------------------------------------------ATTGGC 6 consensus_13234#0 ----------------------------------------GCCCAAGGGCCCGAATTGGC 20 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 AGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGAT-GGCGGCGGCGGCGGTAAC 119 consensus_13234#3 AGCCCAACGACGNCGACGNCGNCGNCGACGACGACGNCGANTGGCGNCGGCGNCGNTAAC 66 consensus_13234#0 AGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGAT-GGCGGCGGCGGCGGTAAC 79 consensus_13234#2 --------------TGCCTGGTATGCGGT-ATGTGAATAGCCGCAAGCAGATACCTTTAT 45 * * ** * * * * * * * * consensus_13234#1 GGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAA 179 consensus_13234#3 GGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTNNCCTACCACCACGAGGAGGAGCAA 126 consensus_13234#0 GGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAA 139 consensus_13234#2 GAGAAGTTTTGTTTTATGCTTTA-TCTTTCTAACCAGATTATGGCTCTCGCACCAA--AA 102 * * * * ** ** * * * ** ** * * ** consensus_13234#1 ACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCC 239 consensus_13234#3 ACCGNCGNCGNTGAAGATGATGATGGCGCTTTGCCCTACCANCTTCCGGATCGAATTGCC 186 consensus_13234#0 ACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCC 199 consensus_13234#2 ATGGTTTATTTTAAACAAGCCA--GGTAATTTACCCTAAGTATGTTCAGCACATGCTGGT 160 * * * ** * * ** *** ***** * * * * ** consensus_13234#1 TCGACGAACCATTCGGGCT--GCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAG 297 consensus_13234#3 TCGACGAACCATTCGGGCT--GNCATANTGAACAAGAGACACACCGTTCCTTGCTACCAG 244 consensus_13234#0 TCGACGAACCATTCGGGCT--GCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAG 257 consensus_13234#2 T--ACTAATTACTATGATTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTA 218 * ** ** * * * * * ** * ** * ** ** * consensus_13234#1 AGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTC-AATGGAGGA-GG 355 consensus_13234#3 AGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTC-AATGGAGGA-GG 302 consensus_13234#0 AGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTC-AATGGAGGA-GG 315 consensus_13234#2 TTACTGGAAGAAGATGC--CTGGAG----GGACATTAGAGCCTTGTTTGATGAAAAATGG 272 * **** ** * * ** ** * * ** **** ** *** * * ** consensus_13234#1 TATAT-GATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGA-ACATCTTGA 413 consensus_13234#3 TATAT-GATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGA-ACATCTTGA 360 consensus_13234#0 TATAT-GATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGA-ACATCTTGA 373 consensus_13234#2 TTTATCGATATTGACATTGA----TGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGC 328 * *** *** * *** * * ** ** ** **** * * consensus_13234#1 CTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTC 473 consensus_13234#3 CTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTC 420 consensus_13234#0 CTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTC 433 consensus_13234#2 CACAGGAAAAGAGCCAGATGTAGCAGCATGGCG-GATCTCGTATAATGACCGGCCAAACG 387 * ** * * * * **** * * * * * * * * * * consensus_13234#1 CGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACT 533 consensus_13234#3 CGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACT 480 consensus_13234#0 CGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACT 493 consensus_13234#2 CAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGG---ATT 444 * ** * *** ** ** *** *** * *** *** * * * consensus_13234#1 TATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTC 593 consensus_13234#3 TATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTC 540 consensus_13234#0 TATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTC 553 consensus_13234#2 TGTCAAGATAAGAGTCCATGTCTTCA-ATTGCTGATTAGATATCTGCTCTAATAATGTTC 503 * * * ** ** * * * * ** * * * * ** * ** consensus_13234#1 CCAACTAGATGC----AATGGAGGATCCAAAAGAAGCACATGCA-AGAAGAGGAGCACCA 648 consensus_13234#3 CCAACTAGATGC----AATGGAGGATCCAAAAGAAGCACATGCA-AGAAGAGGAGCACCA 595 consensus_13234#0 CCAACTAGATGC----AATGGAGGATCCAAAAGAAGCACATGCA-AGAAGAGGAGCACCA 608 consensus_13234#2 AGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAA 563 * *** * ***** * * * * ** ** * * * * *** * * consensus_13234#1 TGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCA 708 consensus_13234#3 TGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGNNNNNNNNNNGTTCA 655 consensus_13234#0 TGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCA 668 consensus_13234#2 TGCATCTC---TCCATGGTGATTTTTGTAGATCAAATAAACT-TATCCCCAACCAGTTTG 619 ** * * ***** * ****** * * * * ** * *** consensus_13234#1 GTT-TATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTTGT 767 consensus_13234#3 GTT-TATGCTCCATCATTTGATCATGNNNNTGGTGA------------------------ 690 consensus_13234#0 GTT-TATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTCGT 727 consensus_13234#2 GTTGTACAGTCGATGATG-AATAACTTATTCAACAACATTCTCTGCAAAAAAAAAAAAAA 678 *** ** ** ** ** ** * * consensus_13234#1 AAAGCCGCAACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGC 827 consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 AAAGCCGCAGTGAGTTATCATTGCAGATCCAGAATATATTCTCTTTGTAGATTGCAGAAT 787 consensus_13234#2 AAAAAAAAAAAAA----------------------------------------------- 691 consensus_13234#1 CTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGT 887 consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 GCTTGAACTCTAGTTTCTTATTTCGATTTAAATCAAATGTGAAGCATGCCTGAGTTATTC 847 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 CTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGC 947 consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 ATATAGTTAGTTCAGATGCTGAACACACTGGCCTTTATAGAACCTTTTAGACCAACTCAC 907 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 ATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCT----TATCATGAAGTCAAAAA 1003 consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 TTTTAGCATTACCTAACACTGGAACCTTATGCTGTTATTATGCTGTGTGGAATGATCATA 967 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 AGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAA 1063 consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 TTCTATCAGGCACTGCCAAGTTCTAATTAATCTTTTTTTAATGAATACCTGTGTTTGGAA 1027 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 TTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTC 1123 consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 CTTTGTATGCCTGTATGCGGTATGTGAATAGCCGCAAGCAGATACCTTTATGAGAAGTTT 1087 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 CATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGA 1183 consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 TGTTTTATGCTTTATCTTTCTAACAGATTATGGCTCTCGCACCAAAAATGGTTTATTTTA 1147 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 TCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTAAAA-- 1241 consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 AACAAGCCAGGTAATTTACCCTAAGTATGTTCAGCACATGCTGGTTACTAATTACTATGA 1207 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 ------------------------------------------------------------ consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 TTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGC 1267 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 ------------------------------------------------------------ consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 CTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGT 1327 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 ------------------------------------------------------------ consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 CTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGC 1387 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 ------------------------------------------------------------ consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 ATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTC 1447 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 ------------------------------------------------------------ consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 TGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGC 1507 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 ------------------------------------------------------------ consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 TGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATG 1567 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 ------------------------------------------------------------ consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 GAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAA 1627 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 ------------------------------------------------------------ consensus_13234#3 ------------------------------------------------------------ consensus_13234#0 ATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTATTCAACACC 1687 consensus_13234#2 ------------------------------------------------------------ consensus_13234#1 ------------------------------------------------------- consensus_13234#3 ------------------------------------------------------- consensus_13234#0 ATTTTTGGCAATTTTCCTACTCTTGAAGAATATGTTTCCAACATCAACTAAAAAA 1742 consensus_13234#2 ------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||