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Oryza sativa
cluster # 13235 cluster # 13235       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13235#0 length = 2414 sequences # 3  
consensus_13235#1 length = 1296 sequences # 5  
consensus_13235#2 length = 816 sequences # 3  
consensus_13235#3 length = 224 sequences # 1  

consensusID : consensus_13235#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2414
fasta sequence
                              [TGGATTTCTTTTATTATTATATGGGGACTATTTACCATTTGTATGGTTCCATATGTATTTCTATATTCAAAGCTCACTCATGTTTTCTCTGATTGGTTATGTGCTTATGGTTCATTCATGATTCACCCACTGTACAGAACAGACAAGTCATGCTTCCATATGGCTTGTCTGATTATAGAATTTTATCAACTAGATTATGGATTTATGGTACCAATTGTGTTGAGTAAAAACATGTGTATGATGTATAGTTATTGCCTAGTACTTCTGACTGGTTTCACTTTTTAATCTGGCAATAGCATCCTATGGATGCCTTTAAATAGCCTTCATTTGTGACACTTGGTGACCTATAGGGTCAATGAGGCATAATTGCTAAAACTACACAAGGCAGCACCAATTTCTGCAAGTTAAAGATTGTGCCTACTATATGCATCATAATATTCTTCAAATATACCTATACTTGAAAGAGAATTCATGTAAAAGATTCTATTTGCCACTGTATTGAACATCTAGAAACAACTTTAGCTTCGGTTTAAATCGTTGCTTGTGTTCATGCGTGATATACCTTGTAGATTGTCTCAGTTGGTTGTAGTGAAATTAATTTTGTGTTCAATCTGAAAGCATTTTGTGGTCACTACATATGATCGAATCTCATGTGTTCATTAAATGCCTTTAGTCGTTTTCTTGTTCACTTTCCTTAACATGTTTCAGTGAGCTACTATAGGGTCATTTGGTTGAATCTTGTGGTTTGGCCTATTTATTTTAAATCGACCTGAAAAAGGTGGGATGTGGGAGTCGAACCCTGGTTGGCAGGGTGGGTTTTCGCCTCGGACTGTTGGCCACCACCCAGCTATCTGGTTTTTGTGCTTAGGAAGGAATACTCAATATATTTAAACTGTGTTTGAACAACAGTTTAACCAGCGGTTCACTGATCAGACCATTGGAACGGTGAACCAAGAGTCTGACCGGCTCGATAGATCCTAATATAGACCAATAAGGATAAAATTGCTATGGTACTTCCTCCTGTGGCCTTCGTCCTTTTTTTGGTGTGTAAACACTGATGCAGAGGCAAATTTGGAACACTCTACAATATGGACAGCTGGCCTGTATTTGATGCTTTTACTCCAATTTTTGGAAAATAAAGTTGCTGTGGAACTCACGAGATCAGAATTCGTTGAAGCCCAAGAGGCTTTAGCTCAGATGATAAACTGGTTTACTCGTTTCCCAACAATTCTCCGAGGTTGTGAAAACACAATCGAAATGCTAAGGGGACAATATGCACACTCTGTCGGCTGCTTTGATGAGGCCGCTTTCCATTTCCTTGAAGCAGCAAGGCTGACGGATAGCAGATCAATGCAATCTATGTGCCAAGTATATGCATCAGTATCCTACATTTGCATGGGTGATGCAGAATCAACTTCACAGGCACTAGAATTGGTTGGTCCTGCTTATAGAACCATGGACTCATTTGTTGGCGTGAGAGAGAAGACCTGTATAATTTTTGTTTATGGACTTTTACTTATGAGACAGCAGAATCCACAAGAAGCAAGGCTTCGCCTTGCTGGTGGTTTGAGAATAGCACACCAACAGTTGGGTAATATCCAATTGGTTTCTCAGTATTTAACAATATTGGGTACATTAGCACTTCAATTACATGACTGTGGACAGGCCAGAGAGATCTTGAAGTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTGTCAGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCTGAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAAGGCTTTCGGAAGCCCATTCTAGTCCATTTCACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAGCTGCACAACTTCTCAAGGGAGCAGCAGGGGATGCCTGGCCCGACAACGGCGAAGGCCGACCTCGACATCCCCGAGTCGGTAGGGCTGTACGCTGCCCAGCCTTCTTCTGTCAAGAGGCTGATCGAACCGAGCTCGGTGCGACGCAGTAGCAGGAGGCGGCTATCCTGACAAAAATCCTGACCTGATGTCTGGGGTGCGTGCCCATCAAATGGGGGCAATGGAGCAGCAGCATGCTCACATACCAAATCTCTTGGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGTGTGAGGTTGTAGGTGCTGATTTATTCCATTGGTTGTTTATTTGTAGTTAATTATGCATTATAGATTGCTCTGTAAACAGATTAAGAGGTAGCAAAAGAACCGAGTTGGTATCGTATGGGTAGAAACTAGAAAGGAAAACAAAAGGTAGCTGCGGATTGAATTCTGTTGGTGATCATTTGTAGTTAAACAATCTAAAGATTGTGAAGTAAACGGAGG]

[+] EMBL AK065410             [TGGATTTCTTTTATTATTATATGGGGACTATTTACCATTTGTATGGTTCCATATGTATTTCTATATTCAAAGCTCACTCATGTTTTCTCTGATTGGTTATGTGCTTATGGTTCATTCATGATTCACCCACTGTACAGAACAGACAAGTCATGCTTCCATATGGCTTGTCTGATTATAGAATTTTATCAACTAGATTATGGATTTATGGTACCAATTGTGTTGAGTAAAAACATGTGTATGATGTATAGTTATTGCCTAGTACTTCTGACTGGTTTCACTTTTTAATCTGGCAATAGCATCCTATGGATGCCTTTAAATAGCCTTCATTTGTGACACTTGGTGACCTATAGGGTCAATGAGGCATAATTGCTAAAACTACACAAGGCAGCACCAATTTCTGCAAGTTAAAGATTGTGCCTACTATATGCATCATAATATTCTTCAAATATACCTATACTTGAAAGAGAATTCATGTAAAAGATTCTATTTGCCACTGTATTGAACATCTAGAAACAACTTTAGCTTCGGTTTAAATCGTTGCTTGTGTTCATGCGTGATATACCTTGTAGATTGTCTCAGTTGGTTGTAGTGAAATTAATTTTGTGTTCAATCTGAAAGCATTTTGTGGTCACTACATATGATCGAATCTCATGTGTTCATTAAATGCCTTTAGTCGTTTTCTTGTTCACTTTCCTTAACATGTTTCAGTGAGCTACTATAGGGTCATTTGGTTGAATCTTGTGGTTTGGCCTATTTATTTTAAATCGACCTGAAAAAGGTGGGATGTGGGAGTCGAACCCTGGTTGGCAGGGTGGGTTTTCGCCTCGGACTGTTGGCCACCACCCAGCTATCTGGTTTTTGTGCTTAGGAAGGAATACTCAATATATTTAAACTGTGTTTGAACAACAGTTTAACCAGCGGTTCACTGATCAGACCATTGGAACGGTGAACCAAGAGTCTGACCGGCTCGATAGATCCTAATATAGACCAATAAGGATAAAATTGCTATGGTACTTCCTCCTGTGGCCTTCGTCCTTTTTTTGGTGTGTAAACACTGATGCAGAGGCAAATTTGGAACACTCTACAATATGGACAGCTGGCCTGTATTTGATGCTTTTACTCCAATTTTTGGAAAATAAAGTTGCTGTGGAACTCACGAGATCAGAATTCGTTGAAGCCCAAGAGGCTTTAGCTCAGATGATAAACTGGTTTACTCGTTTCCCAACAATTCTCCGAGGTTGTGAAAACACAATCGAAATGCTAAGGGGACAATATGCACACTCTGTCGGCTGCTTTGATGAGGCCGCTTTCCATTTCCTTGAAGCAGCAAGGCTGACGGATAGCAGATCAATGCAATCTATGTGCCAAGTATATGCATCAGTATCCTACATTTGCATGGGTGATGCAGAATCAACTTCACAGGCACTAGAATTGGTTGGTCCTGCTTATAGAACCATGGACTCATTTGTTGGCGTGAGAGAGAAGACCTGTATAATTTTTGTTTATGGACTTTTACTTATGAGACAGCAGAATCCACAAGAAGCAAGGCTTCGCCTTGCTGGTGGTTTGAGAATAGCACACCAACAGTTGGGTAATATCCAATTGGTTTCTCAGTATTTAACAATATTGGGTACATTAGCACTTCAATTACATGACTGTGGACAGGCCAGAGAGATCTTGAAGTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTGTCAGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCTGAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAAGGCTTTCGGAAGCCCATTCTAGTCCATTTCACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAGCTGCACAACTTCTCAAGGGAGCAGCAGGGGATGCCTGGCCCGACAACGGCGAAGGCCGACCTCGACATCCCCGAGTCGGTAGGGCTGTACGCTGCCCAGCCTTCTTCTGTCAAGAGGCTGATCGAACCGAGCTCGGTGCGACGCAGTAGCAGGAGGCGGCTATCCTGACAAAAATCCTGACCTGATGTCTGGGGTGCGTGCCCATCAAATGGGGGCAATGGAGCAGCAGCATGCTCACATACCAAATCTCTTGGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGTGTGAGGTTGTAGGTGCTGATTTATTCCATTGGTTGTTTATTTGTAGTTAATTATGCATTATAGATTGCTCTGTAAACAGATTAAGAGGTAGCAAAAGAACCGAGTTGGTATCGTATGGGTAGAAACTAGAAAGGAAAACAAAAGATAGCTGCGGATTGAATTCTGTTGGTGATCATTTGTAGTTAAACAATCTAAAGATTGTGAAGTAAACGGAGG]
[-] EMBL CB654141             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAATATTGGGTACATTAGCACTTCAATTACATGACTGTGGACAGGCCAGAGAGATCTTGAAGTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTGTCAGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCTGAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAAGGCTTTCGGAAGCCCATTCTAGTCCATTTCACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAGCTGCACAACTTCTCAAGGGAGCAGCAGGGGATGCCTGGCCCGACAACGGCGAAGGCCGACCTCGACATCCCCGAGTCGGTAGGGCTGTACGCTGCCCAGCCTTCTTCTGTCAAGAGGCTGATCGAACCGAGCTCGGTGCGACGCAGTAGCAGGAGGCGGCTATCCTGACAAAAATCCTGACCTGATGTCTGGGGTGCGTGCCCATCAAATGGGGGCAATGGAGCAGCAGCATGCTCACATACCAAATCTCTTGGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGTGTGAGGTTGTAGGTGCTGATTTATTCCATTGGTTGTTTATTTGTAGTTAATTATGCATTATAGATTGCTCTGTAAACAGATTAAGAGGTAGCAAAAGAACCGAGTTGGTATCGTATGGGTAGAAACTAGAAAGGAAAACAAAAGGTAGCTGCGGATTGAATTCTGTTGGTGATCATTTGTAGTTAAACAATCTAAAGATTGTGAAGT         ]
[-] EMBL CB668931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACTGTGGACAGGCCAGAGAGATCTTGAAGTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTGTCAGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCTGAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAAGGCTTTCGGAAGCCCATTCTAGTCCATTTCACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAGCTGCACAACTTCTCAAGGGAGCAGCAGGGGATGCCTGGCCCGACAACGGCGAAGGCCGACCTCGACATCCCCGAGTCGGTAGGGCTGTACGCTGCCCAGCCTTCTTCTGTCAAGAGGCTGATCGAACCGAGCTCGGTGCGACGCAGTAGCAGGAGGCGGCTATCCTGACAAAAATCCTGACCTGATGTCTGGGGTGCGTGCCCATCAAATGGGGGCAATGGAGCAGCAGCATGCTCACATACCAAATCTCTTGGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGTGTGAGGTTGTAGGTGCTGATTTATTCCATTGGTTGTTTATTTGTAGTTAATTATGCATTATAGATTGCTCTGTAAACAGATTAAGAGGTAGCAAAAGAACCGAGTTGGTATCGTATGGGTAGAAACTAGAAAGGAAAACAAAAGGTAGCTGCGGATTGAATTCTGTTGGTGATCATTTGTAGTTAACCAATATGAAGATTGTGAAGTA        ]


>consensus_13235#0 TGGATTTCTTTTATTATTATATGGGGACTATTTACCATTTGTATGGTTCCATATGTATTT CTATATTCAAAGCTCACTCATGTTTTCTCTGATTGGTTATGTGCTTATGGTTCATTCATG ATTCACCCACTGTACAGAACAGACAAGTCATGCTTCCATATGGCTTGTCTGATTATAGAA TTTTATCAACTAGATTATGGATTTATGGTACCAATTGTGTTGAGTAAAAACATGTGTATG ATGTATAGTTATTGCCTAGTACTTCTGACTGGTTTCACTTTTTAATCTGGCAATAGCATC CTATGGATGCCTTTAAATAGCCTTCATTTGTGACACTTGGTGACCTATAGGGTCAATGAG GCATAATTGCTAAAACTACACAAGGCAGCACCAATTTCTGCAAGTTAAAGATTGTGCCTA CTATATGCATCATAATATTCTTCAAATATACCTATACTTGAAAGAGAATTCATGTAAAAG ATTCTATTTGCCACTGTATTGAACATCTAGAAACAACTTTAGCTTCGGTTTAAATCGTTG CTTGTGTTCATGCGTGATATACCTTGTAGATTGTCTCAGTTGGTTGTAGTGAAATTAATT TTGTGTTCAATCTGAAAGCATTTTGTGGTCACTACATATGATCGAATCTCATGTGTTCAT TAAATGCCTTTAGTCGTTTTCTTGTTCACTTTCCTTAACATGTTTCAGTGAGCTACTATA GGGTCATTTGGTTGAATCTTGTGGTTTGGCCTATTTATTTTAAATCGACCTGAAAAAGGT GGGATGTGGGAGTCGAACCCTGGTTGGCAGGGTGGGTTTTCGCCTCGGACTGTTGGCCAC CACCCAGCTATCTGGTTTTTGTGCTTAGGAAGGAATACTCAATATATTTAAACTGTGTTT GAACAACAGTTTAACCAGCGGTTCACTGATCAGACCATTGGAACGGTGAACCAAGAGTCT GACCGGCTCGATAGATCCTAATATAGACCAATAAGGATAAAATTGCTATGGTACTTCCTC CTGTGGCCTTCGTCCTTTTTTTGGTGTGTAAACACTGATGCAGAGGCAAATTTGGAACAC TCTACAATATGGACAGCTGGCCTGTATTTGATGCTTTTACTCCAATTTTTGGAAAATAAA GTTGCTGTGGAACTCACGAGATCAGAATTCGTTGAAGCCCAAGAGGCTTTAGCTCAGATG ATAAACTGGTTTACTCGTTTCCCAACAATTCTCCGAGGTTGTGAAAACACAATCGAAATG CTAAGGGGACAATATGCACACTCTGTCGGCTGCTTTGATGAGGCCGCTTTCCATTTCCTT GAAGCAGCAAGGCTGACGGATAGCAGATCAATGCAATCTATGTGCCAAGTATATGCATCA GTATCCTACATTTGCATGGGTGATGCAGAATCAACTTCACAGGCACTAGAATTGGTTGGT CCTGCTTATAGAACCATGGACTCATTTGTTGGCGTGAGAGAGAAGACCTGTATAATTTTT GTTTATGGACTTTTACTTATGAGACAGCAGAATCCACAAGAAGCAAGGCTTCGCCTTGCT GGTGGTTTGAGAATAGCACACCAACAGTTGGGTAATATCCAATTGGTTTCTCAGTATTTA ACAATATTGGGTACATTAGCACTTCAATTACATGACTGTGGACAGGCCAGAGAGATCTTG AAGTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTG TCAGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCT GAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAAGGCTTTCGGAAGCCCATTCTAGT CCATTTCACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAGCTGCACAACTTC TCAAGGGAGCAGCAGGGGATGCCTGGCCCGACAACGGCGAAGGCCGACCTCGACATCCCC GAGTCGGTAGGGCTGTACGCTGCCCAGCCTTCTTCTGTCAAGAGGCTGATCGAACCGAGC TCGGTGCGACGCAGTAGCAGGAGGCGGCTATCCTGACAAAAATCCTGACCTGATGTCTGG GGTGCGTGCCCATCAAATGGGGGCAATGGAGCAGCAGCATGCTCACATACCAAATCTCTT GGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGTGTGAGGTTGTAGGTGCTGATTT ATTCCATTGGTTGTTTATTTGTAGTTAATTATGCATTATAGATTGCTCTGTAAACAGATT AAGAGGTAGCAAAAGAACCGAGTTGGTATCGTATGGGTAGAAACTAGAAAGGAAAACAAA AGGTAGCTGCGGATTGAATTCTGTTGGTGATCATTTGTAGTTAAACAATCTAAAGATTGT GAAGTAAACGGAGG



consensusID : consensus_13235#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1296
fasta sequence
                              [CTCGCCCACTCCCTCCTCGCCACCGCCTACGGCGTCCTCGGCGCCGTCCCCTCGCAGAAGAACGTGCTCCGCCGCGGCCTGGGGCTCCTCGCCTCCGCCTCCGCGTCGGGCCTCCTCGCCCGTGGCCCGGCCCTCCTGTGGACCTGCAACTTCCAGACGCAGCTCGCCTCCGCGCTCGCCGTAGATGGGGACGCCGCCTCCGCGCTCTCCACGCTGTCCGCCGGCGCCTCCGCCGCCGCGGAGCTCGGGAGCCCCCAGCTCGAGCTCTTCTTCGCCGCCACCGGCCTCCACGTCCACCTCCTCTGCTGGGAGGACAACGCCGCCGTTGAGGCCGCCGTCACGCGCGCCTCCGGCCTCTGGGAAGCACTCCCCGCCGACCAGAAGGAGCAGTGGACTGGGTTGTTCTTCTACACAGAGCTGCTTCAGACCTTCTACCTGTTGAGGACATGTGACTACAAGGCTGCCTCGCAGCATGTGGAGCGGCTAGACACTGCCGCGAAGGACGAGATGCAGAAAGGCCAGCGGGTTCAGGAGCTTGCTGCTGAGCTCGGCACGGTGGAGAGAACGCTAGCGCAACCAGGGTTGAAGGAGAGGGAGAGGTCGGCGCTAACGCACAAGCAGAGGCAGCTCAAGTATCAGCTGCAAACATTGTGTGGCTATGACAAACTGAATGATGTGTTGGATTACGGGGATAAGTTGCTGTTGGCACCGCCGCCGATGCATGGGGAGTGGCTCCCACGGGCTGCGGTGTTTGTGCTGGTGGATCTCATGGTTGTCATGGTGAGCCGGCCAAAAGGAATATTTAAGGAGTTCGGAAAGAGAATTCATTCAGGACTGGAGCTCATTCGTGGGGAACTCTCGAAGCTTGGGATTNTGGATGGTGTTACANAGGCAAATTTNGGACACTCTACAATATGGNCCAGCTGGCCTNTATTTGATTGCTTTTACCTCAATTTTTGGAAAATAAAGTTGCTGTGGAACTCACGAGATCAGAATTCGTTGAAGCCCAAGAGGCTTTAGCTCAGATGATAAACTGGTTTACTCGTTTCCCAACAATTCTCCGAGGTTGTGAAAACACAATCGAAATGCTAAGGGGACAATATGCACACTCTGTCGGCTGCTTTGATGAGGCCGCTTTCCATTTCCTTGAAGCAGCAAGGCTGACGGATAGCAGATCAATGCAATCTATGTGCCAAGTATATGCATCAGTATCCTACATTTGCATGGGTGATGCAGAATCAACTTCACAGGCACTAGAATTGGTTGGTCCTGCTTATAGAACCATGGACTCATTTG]

[+] EMBL CB623206             [CTCGCCCACTCCCTCCTCGCCACCGCCTACGGCGTCCTCGGCGCCGTCCCCTCGCAGAAGAACGTGCTCCGCCGCGGCCTGGGGCTCCTCGCCTCCGCCTCCGCGTCGGGCCTCCTCGCCCGTGGCCCGGCCCTCCTGTGGACCTGCAACTTCCAGACGCAGCTCGCCTCCGCGCTCGCCGTAGATGGGGACGCCGCCTCCGCGCTCTCCACGCTGTCCGCCGGCGCCTCCGCCGCCGCGGAGCTCGGGAGCCCCCAGCTCGAGCTCTTCTTCGCCGCCACCGGCCTCCACGTCCACCTCCTCTGCTGGGAGGACAACGCCGCCGTTGAGGCCGCCGTCACGCGCGCCTCCGGCCTCTGGGAAGCACTCCCCGCCGACCAGAAGGAGCAGTGGACTGGGTTGTTCTTCTACACAGAGCTGCTTCAGACCTTCTACCTGTTGAGGACATGTGACTACAAGGCTGCCTCGCAGCATGTGGAGCGGCTAGACACTGCCGCGAAGGACGAGATGCAGAAAGGCCAGCGGGTTCAGGAGCTTGCTGCTGAGCTCGGCACGGTGGAGAGAACGCTAGCGCAACCAGGGTTGAAGGAGAGGGAGAGGTCGGCGCTAACGCACAAGCAGAGGCAGCTCAAGTATCAGCTGCAAACATTGTGTGGCTATGACAAACTGAATGATGTGTTGGATTACGGGGATAAGTTGCTGTTGGCACCGCCGCCGATGCATGGGGAGTGGCTCCCACGGGCTGCGGTGTTTGTGCTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB623244             [CTCGCCCACTCCCTCCTCGCCACCGCCTACGGCGTCCTCGGTGCCGTCCCCTCGGAGAAGAACGTGCTCCGCCGCGGCCTGGGGCTCCTCGCCTCCGCCTCCGCGGCGGGCCTCCTCGCCCGTGGCCCGGCCCTCCTGTGGACCTGCAACTTCCAGACGCAGCTCGCCTCCGCGCTCGCCGTAGATGGGGACGCCGCCTCCGCGCTCTCCACGCTGTCCGCCGGCGCCTCCGCCGCCGCGGAGCTCGGGAGCCCCCAGCTCGAGCTCTTCTTCGCCGCCACCGGCCTCCACGTCCACCTCCTCTGCTGGGAGGACAACGCCGCCGTTGAGGCCGCCGTCACGCGCGCCTCCGGCCTCTGGGAAGCACTCCCCGCCGACCAGAAGGAGCAGTGGACTGGGTTGTTCTTCTACACAGAGCTGCTTCTGACCTTCTACCTGTTGAGGACATGTGACTACAACGCTGCCTCGCTGCATGTGGAGCGGCTAGACACTGCCGCGAAGGACGAGATGCAGAAAGGCCAGCGGGTTCAGGAGCTTGCTGCTGAACTCGGCACGGTGGAGAGAACGCTAGCGCAACCAGCGTTGATGGAGAGGGAGAGGTCGGCGCTAACGCACAAGCAGAGGCAGCTCATGTATCAGCTGCAAACATTGTGTGGCTATGACAAACTGAATGATGTGTTGGATTACGGGGATAAGTTGCTGTTGGCACCGCCACCGATGCATGGGGAGTGGCTCCCACGGGCTGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB623208             [CTCGCCCACTCCCTCCTCGCCACCGCCTACGGCGTCCTCGGCGCCGTCCCCTCGCAGAAGAACGTGCTCCGCCGCGGCCTGGGGCTCCTCGCCTCCGCCTCCGCGTCGGGCCTCCTCGCCCGTGGCCCGGCCCTCCTGTGGACCTGCAACTTCCAGACGCAGCTCGCCTCCGCGCTCGCCGTAGATGGGGACGCCGCCTCCGCGCTCTCCACGCTGTCCGCCGGCGCCTCCGCCGCCGCGGAGCTCGGGAGCCCCCAGCTCGAGCTCTTCTTCGCCGCCACCGGCCTCCACGTCCACCTCCTCTGCTGGGAGGACAACGCCGCCGTTGAGGCCGCCGTCACGCGCGCCTCCGGCCTCTGGGAAGCACTCCCCGCCGACCAGAAGGAGCAGTGGACTGGGTTGTTCTTCTACACAGAGCTGCTTCAGACCTTCTACCTGTTGAGGACATGTGACTACAAGGCTGCCTCGCAGCATGTGGAGCGGCTAGACACTGCCGCGAAGGACGAGATGCAGAAAGGCCAGCGGGTTCAGGAGCTTGCTGCTGAGCTCGGCACGGTGGAGAGAACGCTAGCGCAACCAGGGTTGAAGGAGAGGGAGAGGTCGGCGCTAACGCACAAGCAGAGGCAGCTCAAGTATCAGCTGCAAACATTGTGTGGCTATGACAAACTGAATGATGTGTTGGATTACGGGGATTAGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C26835               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCTCGGCACGGTGGNGAGAACGCTAGCGCAACCAGGGTTGAAGGAGAGGGAGAGGTCGGCGCTAACGCACAAGCAGAGGCAGCTCAAGTATCAGCTGCAAACATTGTGTGGCTATGACAAACTGAATGATGTGTTGGATTACGGGGATAAGTTGCTGTTGGCACCGNCGNCGNTGCATGGGGAGTGGCTCCCACGGGCTGCGGTGTTTGTGCTGGTGGATCTCATGGTTGTCATGGTGAGCCGGCCAAAAGGAATATTTAAGGAGTTCGGAAAGAGAATTCATTCAGGACTGGAGCTCATTCGTGGGGAACTCTCGAAGCTTGGGATTNTGGATGGTGTTACANAGGCAAATTTNGGACACTCTACAATATGGNCCAGCTGGCCTNTATTTGATTGCTTTTACCT                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF323790             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAAGGAATATTTAAGGAGTGCGGAAAGAGAATTCATTCAGGACTGGAGCTCATTCGTGGGGAACTCTCGAAGCTTGGGATTGTGGATGGTGTGACAGAGGCAAATTTGGAACACTCTACAATATGG ACAGCTGGCCTGTATTTGA TGCTTTTACTCCAATTTTTGGAAAATAAAGTTGCTGTGGAACTCACGAGATCAGAATTCGTTGAAGCCCAAGAGGCTTTAGCTCAGATGATAAACTGGTTTACTCGTTTCCCAACAATTCTCCGAGGTTGTGAAAACACAATCGAAATGCTAAGGGGACAATATGCACACTCTGTCGGCTGCTTTGATGAGGCCGCTTTCCATTTCCTTGAAGCAGCAAGGCTGACGGATAGCAGATCAATGCAATCTATGTGCCAAGTATATGCATCAGTATCCTACATTTGCATGGGTGATGCAGAATCAACTTCACAGGCACTAGAATTGGTTGGTCCTGCTTATAGAACCATGGACTCATTTG]


>consensus_13235#1 CTCGCCCACTCCCTCCTCGCCACCGCCTACGGCGTCCTCGGCGCCGTCCCCTCGCAGAAG AACGTGCTCCGCCGCGGCCTGGGGCTCCTCGCCTCCGCCTCCGCGTCGGGCCTCCTCGCC CGTGGCCCGGCCCTCCTGTGGACCTGCAACTTCCAGACGCAGCTCGCCTCCGCGCTCGCC GTAGATGGGGACGCCGCCTCCGCGCTCTCCACGCTGTCCGCCGGCGCCTCCGCCGCCGCG GAGCTCGGGAGCCCCCAGCTCGAGCTCTTCTTCGCCGCCACCGGCCTCCACGTCCACCTC CTCTGCTGGGAGGACAACGCCGCCGTTGAGGCCGCCGTCACGCGCGCCTCCGGCCTCTGG GAAGCACTCCCCGCCGACCAGAAGGAGCAGTGGACTGGGTTGTTCTTCTACACAGAGCTG CTTCAGACCTTCTACCTGTTGAGGACATGTGACTACAAGGCTGCCTCGCAGCATGTGGAG CGGCTAGACACTGCCGCGAAGGACGAGATGCAGAAAGGCCAGCGGGTTCAGGAGCTTGCT GCTGAGCTCGGCACGGTGGAGAGAACGCTAGCGCAACCAGGGTTGAAGGAGAGGGAGAGG TCGGCGCTAACGCACAAGCAGAGGCAGCTCAAGTATCAGCTGCAAACATTGTGTGGCTAT GACAAACTGAATGATGTGTTGGATTACGGGGATAAGTTGCTGTTGGCACCGCCGCCGATG CATGGGGAGTGGCTCCCACGGGCTGCGGTGTTTGTGCTGGTGGATCTCATGGTTGTCATG GTGAGCCGGCCAAAAGGAATATTTAAGGAGTTCGGAAAGAGAATTCATTCAGGACTGGAG CTCATTCGTGGGGAACTCTCGAAGCTTGGGATTNTGGATGGTGTTACANAGGCAAATTTN GGACACTCTACAATATGGNCCAGCTGGCCTNTATTTGATTGCTTTTACCTCAATTTTTGG AAAATAAAGTTGCTGTGGAACTCACGAGATCAGAATTCGTTGAAGCCCAAGAGGCTTTAG CTCAGATGATAAACTGGTTTACTCGTTTCCCAACAATTCTCCGAGGTTGTGAAAACACAA TCGAAATGCTAAGGGGACAATATGCACACTCTGTCGGCTGCTTTGATGAGGCCGCTTTCC ATTTCCTTGAAGCAGCAAGGCTGACGGATAGCAGATCAATGCAATCTATGTGCCAAGTAT ATGCATCAGTATCCTACATTTGCATGGGTGATGCAGAATCAACTTCACAGGCACTAGAAT TGGTTGGTCCTGCTTATAGAACCATGGACTCATTTG



consensusID : consensus_13235#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 816
fasta sequence
                              [AATATTGGGTACATTAGCACTTCAATTACATGACTGTGGACAGGCCAGAGAGATCTTGAAGTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTGTCAGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCTGAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAAGGCTTTCGGAAGCCCATTCTAGTCCATTTCACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAGCTGCACAACTTCTCAAGGGAGCAGCAGGGGATGCCTGGCCCGACAACGGCGAAGGCTGACCTCGACATCCCCGAGTCGGTAGGGCTGTATGCTGCCCAGCCTTCTTCTGTCAAGAGGCTGATCGAACCGAGCTCGGTGCGACGCAGTAGCAGGAGACGGCTATCCTGACAAAAATCCTGATATGATGTCTGGGGTGCCTGCCCATCAAATGGGGGCAATGGAGCAGCAGCATGCTCACATACCAACTCTTGGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGTTTGAGGTTGTAGGTGCTGATTTATTCCATTGGTGGTTTATTTGTAGTTAATTATGCATTATAGATTGCTCTGTAAAC-AGATTAAGAGGTAGCAAAAGAACCGAGTTGGTGTCGTATGGGTAGAAACTAGAAAGTAGGATTCCAGCTTAGGAAAACAAAAGGTAGCTGCGGATTGAATTCTGTTGGTGATCATTTGTAGTTAAACAATGTAAAAATTGTGAAGTAAAC-AGAGGAAGTGAGAAC]

[-] EMBL CB623209             [AATATTGGGTACATTAGCACTTCAATTACATGACTGTGGACAGGCCAGAGAGATCTTGAAGTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTGTCAGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCTGAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAAGGCTTTCGGAAGCCCATTCTAGTCCATTTCACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAGCTGCACAACTTCTCAAGGGAGCAGCAGGGGATGCCTGGCCCGACAACGGCGAAGGCTGACCTCGACATCCCCGAGTCGGTAGGGCTGTATGCTGCCCAGCCTTCTTCTGTCAAGAGGCTGATCGAACCGAGCTCGGTGCGACGCAGTAGCAGGAGACGGCTATCCTGACAAAAATCCTGATATGATGTCTGGGGTGCCTGCCCATCAAATGGGGGCAATGGAGCAGCAGCATGCTCACATACCAACTCTTGGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGTTTGAGGTTGTAGGTGCTGATTTATTCCATTGGTGGTTTATTTGTAGTTAATTATGCATTATAGATTGCTCTGTAAAC AGATTAAGAGGTAGCAAAAGAACCGAGTTGGTGTCGTATGGGTAGAAACTAGAAAGTAGGATTCCAGCTTAGGAAAACAAAAGGTAGCTGCGGATTGAATTCTGTTGGTGATCATTTGTAGTTAAACAATCTAAAAATTGTGAAGTAAAC AGAGGA         ]
[-] EMBL CB623207             [                                ACTGTGGACAGGCCAGAGAGATCTTGAAGTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTGTCAGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCTGAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAAGGCTTTCGGAAGCCCATTCTAGTCCATTTCACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAGCTGCACAACTTCTCAAGGGAGCAGCAGGGGATGCCTGGCCCGACAACGGCGAAGGCTGACCTCGACATCCCCGAGTCGGTAGGGCTGTATGCTGCCCAGCCTTCTTCTGTCAAGAGGCTGATCGAACCGAGCTCGGTGCGACGCAGTAGCAGGAGACGGCTATCCTGACAAAAATCCTGATATGATGTCTGGGGTGCCTGCCCATCAAATGGGGGCAATGGAGCAGCAGCATGCTCACATACCAACTCTTGGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGTTTGAGGTTGTAGGTGCTGATTTATTCCATTGGTGGTTTATTTGTAGTTAATTATGCATTATAGATTGCTCTGTAAAC AGATTAAGAGGTAGCAAAAGAACCGAGTTGGTGTCGTATGGGTAGAAACTAGAAAGTAGGATTCCAGCTTAGGAAAACAAAAGGTAGCTGCGGATTGAATTCTGTTGGTGATCATTTGTAGTTAAACAATGTAAAAATTGTGAAGTAAAC AGAGGAAGTGAGAAC]
[-] EMBL CB623245             [                                                                                                   AACCCAAATTTGGATCTTGTCAGTATTTGCAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCTGAGTATGAAAGGAAGAAAGAAGATGATGTGCAAAGAAGGCTTTCGGAAGCCCATTATAGTCCATTTCCCCAGGAGGTGGTGGAGAAGACCAGAATCCAAGTTCAGCAGCTGCACAACTTGTCAAGGGAGCAGCAGGGGATTCCTGGCCCGACAACGGCGAAGGCTGACCTTGACATCCCCGAGTCGGTAGGGCTGTATGCTGCCCAGCCTTCTTCTGTCAAGAGGGTGATCGAACCGAGCTCGGTGTGACGCAGTAGCAGGAGACGGCTATCCTGACAAAAATCCTGATATGATGTCTGGGGTGCCTGCCCATCAAATGGGGGCAATGGAGCAGCAGCATGCTCACATACCAACTCTTGGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGTTTGAGGTTGTAGGTGCTGATTTATTCCATTGGTGGTTTATTTGTAGTTAATTATGCATTATAGATTGCTCTGTAAACTAGATTAAGAGGTAGCAAAAGAACCGAGTTGGTGTCGTATGGGTAGAAATTAGAAAGTAGGATTCCAGCTTAGGAAAACAAAAGGTAGCTGCGGATTGAATTATGTTGGTGATCATTTGTAGTTGATCAAAGGAAAAATTGTGAAGTAAACTAGAGGAAGTGAGAA ]


>consensus_13235#2 AATATTGGGTACATTAGCACTTCAATTACATGACTGTGGACAGGCCAGAGAGATCTTGAA GTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTGTC AGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCTGA GTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAAGGCTTTCGGAAGCCCATTCTAGTCC ATTTCACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAGCTGCACAACTTCTC AAGGGAGCAGCAGGGGATGCCTGGCCCGACAACGGCGAAGGCTGACCTCGACATCCCCGA GTCGGTAGGGCTGTATGCTGCCCAGCCTTCTTCTGTCAAGAGGCTGATCGAACCGAGCTC GGTGCGACGCAGTAGCAGGAGACGGCTATCCTGACAAAAATCCTGATATGATGTCTGGGG TGCCTGCCCATCAAATGGGGGCAATGGAGCAGCAGCATGCTCACATACCAACTCTTGGGA TATAGCAGCAATGGAAGAAGAGCTGTGACATTGTTTGAGGTTGTAGGTGCTGATTTATTC CATTGGTGGTTTATTTGTAGTTAATTATGCATTATAGATTGCTCTGTAAACAGATTAAGA GGTAGCAAAAGAACCGAGTTGGTGTCGTATGGGTAGAAACTAGAAAGTAGGATTCCAGCT TAGGAAAACAAAAGGTAGCTGCGGATTGAATTCTGTTGGTGATCATTTGTAGTTAAACAA TGTAAAAATTGTGAAGTAAACAGAGGAAGTGAGAAC



consensusID : consensus_13235#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 224
fasta sequence
                              [CTGAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAACTTTCGGAAGCCATTCTAGTCCATTTCACCAGGAGCTGGGAGAAGACCAGAATCCAAGTTGAGCAGCTGCACAACTTCTCAAGGGAGCAGCAGGGGATSCTGGCCCGACAAACGCGAACSACCTCGACATCCCCGAGTCGTAGGCTGTACGCTGCCAGCCTTCTTCTGTCAAGAGGCTGATCGAA]

[+] EMBL AA749709             [CTGAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAACTTTCGGAAGCCATTCTAGTCCATTTCACCAGGAGCTGGGAGAAGACCAGAATCCAAGTTGAGCAGCTGCACAACTTCTCAAGGGAGCAGCAGGGGATSCTGGCCCGACAAACGCGAACSACCTCGACATCCCCGAGTCGTAGGCTGTACGCTGCCAGCCTTCTTCTGTCAAGAGGCTGATCGAA]


>consensus_13235#3 CTGAGTATGAAAGGAAGAAAGAAGATGATCTGCAAAGAACTTTCGGAAGCCATTCTAGTC CATTTCACCAGGAGCTGGGAGAAGACCAGAATCCAAGTTGAGCAGCTGCACAACTTCTCA AGGGAGCAGCAGGGGATSCTGGCCCGACAAACGCGAACSACCTCGACATCCCCGAGTCGT AGGCTGTACGCTGCCAGCCTTCTTCTGTCAAGAGGCTGATCGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      TGGATTTCTTTTATTATTATATGGGGACTATTTACCATTTGTATGGTTCCATATGTATTT 60
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      CTATATTCAAAGCTCACTCATGTTTTCTCTGATTGGTTATGTGCTTATGGTTCATTCATG 120
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      ATTCACCCACTGTACAGAACAGACAAGTCATGCTTCCATATGGCTTGTCTGATTATAGAA 180
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      TTTTATCAACTAGATTATGGATTTATGGTACCAATTGTGTTGAGTAAAAACATGTGTATG 240
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      ATGTATAGTTATTGCCTAGTACTTCTGACTGGTTTCACTTTTTAATCTGGCAATAGCATC 300
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      CTATGGATGCCTTTAAATAGCCTTCATTTGTGACACTTGGTGACCTATAGGGTCAATGAG 360
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GCATAATTGCTAAAACTACACAAGGCAGCACCAATTTCTGCAAGTTAAAGATTGTGCCTA 420
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      CTATATGCATCATAATATTCTTCAAATATACCTATACTTGAAAGAGAATTCATGTAAAAG 480
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      ATTCTATTTGCCACTGTATTGAACATCTAGAAACAACTTTAGCTTCGGTTTAAATCGTTG 540
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      CTTGTGTTCATGCGTGATATACCTTGTAGATTGTCTCAGTTGGTTGTAGTGAAATTAATT 600
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      TTGTGTTCAATCTGAAAGCATTTTGTGGTCACTACATATGATCGAATCTCATGTGTTCAT 660
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      TAAATGCCTTTAGTCGTTTTCTTGTTCACTTTCCTTAACATGTTTCAGTGAGCTACTATA 720
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GGGTCATTTGGTTGAATCTTGTGGTTTGGCCTATTTATTTTAAATCGACCTGAAAAAGGT 780
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GGGATGTGGGAGTCGAACCCTGGTTGGCAGGGTGGGTTTTCGCCTCGGACTGTTGGCCAC 840
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      CACCCAGCTATCTGGTTTTTGTGCTTAGGAAGGAATACTCAATATATTTAAACTGTGTTT 900
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GAACAACAGTTTAACCAGCGGTTCACTGATCAGACCATTGGAACGGTGAACCAAGAGTCT 960
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GACCGGCTCGATAGATCCTAATATAGACCAATAAGGATAAAATTGCTATGGTACTTCCTC 1020
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      CTGTGGCCTTCGTCCTTTTTTTGGTGTGTAAACACTGATGCAGAGGCAAATTTGGAACAC 1080
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      TCTACAATATGGACAGCTGGCCTGTATTTGATGCTTTTACTCCAATTTTTGGAAAATAAA 1140
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GTTGCTGTGGAACTCACGAGATCAGAATTCGTTGAAGCCCAAGAGGCTTTAGCTCAGATG 1200
consensus_13235#1      ------------------------------------------------------------
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      ATAAACTGGTTTACTCGTTTCCCAACAATTCTCCGAGGTTGTGAAAACACAATCGAAATG 1260
consensus_13235#1      ---------------------CTCGCCCACTCCCTCCTCGCCACCGCCTACGGCGTCCTC 39
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      CTAAGGGGACAATATGCACACTCTGTCGGCTGCTTTGATGAGGCCGCTTTCCATTTCCTT 1320
consensus_13235#1      GGCGCCGTCCCCTCGCAGAAGAACGTGCTCCGCCGCGGCCTGGGGCTCCTCGCCTCCGCC 99
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GAAGCAGCAAGGCTGACGGATAGCAGATCAATGCAATCTATGTGCCAAGTATATGCATCA 1380
consensus_13235#1      TCCGCGTCGGGCCTCCTCGCCCGTGGCCCGGCCCTCCTGTGGACCTGCAACTTCCAGACG 159
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GTATCCTACATTTGCATGGGTGATGCAGAATCAACTTCACAGGCACTAGAATTGGTTGGT 1440
consensus_13235#1      CAGCTCGCCTCCGCGCTCGCCGTAGATGGGGACGCCGCCTCCGCGCTCTCCACGCTGTCC 219
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      CCTGCTTATAGAACCATGGACTCATTTGTTGGCGTGAGAGAGAAGACCTGTATAATTTTT 1500
consensus_13235#1      GCCGGCGCCTCCGCCGCCGCGGAGCTCGGGAGCCCCCAGCTCGAGCTCTTCTTCGCCGCC 279
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GTTTATGGACTTTTACTTATGAGACAGCAGAATCCACAAGAAGCAAGGCTTCGCCTTGCT 1560
consensus_13235#1      ACCGGCCTCCACGTCCACCTCCTCTGCTGGGAGGACAACGCCGCCGTTGAGGCCGCCGTC 339
                                                                                   

consensus_13235#2      ------------------------------------------------------------
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GGTGGTTTGAGAATAGCACACCAACAGTTGGGTAATATCCAATTGGTTTCTCAGTATTTA 1620
consensus_13235#1      ACGCGCGCCTCCGGCCTCTGGGAAGCACTCCCCGCCGACCAGAAGGAGCAGTGGACTGGG 399
                                                                                   

consensus_13235#2      --AATATTGGGTACATTAGCACTTCAATTACATGACTGTGGACAGGCCAGAGAGATCTTG 58
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      ACAATATTGGGTACATTAGCACTTCAATTACATGACTGTGGACAGGCCAGAGAGATCTTG 1680
consensus_13235#1      TTGTTCTTCTACACAGAGCTGCTTCAGACCTTCTACCTGTTGAGGACATGTGACTACAAG 459
                                                                                   

consensus_13235#2      AAGTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTG 118
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      AAGTCATCACTGACATTAGCTAAAACACTTTATGACATCCCAACCCAAATTTGGATCTTG 1740
consensus_13235#1      GCTGCCTCGCAGCATGTGGAGCGGCTAGACACTGCCGCGAAGGACGAGATGCAGAAAGGC 519
                                                                                   

consensus_13235#2      TCAGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCT 178
consensus_13235#3      ----------------------------------------------------------CT 2
consensus_13235#0      TCAGTATTTACAGAGTTATATCGAGAATTGAAAGAAAGGGAAAATGAAATGGAAAACTCT 1800
consensus_13235#1      CAGCGGGTTCAGGAGCTTGCTGCTGAGCTCGGCACGGTGGAGAGAACGCTAGCGCAACCA 579
                                                                                 * 

consensus_13235#2      GAGT---ATGAAAGGAAGAAA--GAAGATGATCTGCAA--AGAAGGCTTTCGGAAGCCCA 231
consensus_13235#3      GAGT---ATGAAAGGAAGAAA--GAAGATGATCTGCAA--AGAA--CTTTCGGAAGCC-A 52
consensus_13235#0      GAGT---ATGAAAGGAAGAAA--GAAGATGATCTGCAA--AGAAGGCTTTCGGAAGCCCA 1853
consensus_13235#1      GGGTTGAAGGAGAGGGAGAGGTCGGCGCTAACGCACAAGCAGAGGCAGCTCAAGTATCAG 639
                       * **   * ** *** ***    *  * * *    ***  ***      **      *  

consensus_13235#2      TTCTAGTCCATTT-----CACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAG 286
consensus_13235#3      TTCTAGTCCATTT-----CACCAGGAGCTGG--GAGAAGACCAGAATCCAAGTTGAGCAG 105
consensus_13235#0      TTCTAGTCCATTT-----CACCAGGAGCTGGTGGAGAAGACCAGAATCCAAGTTCAGCAG 1908
consensus_13235#1      CTGCAAACATTGTGTGGCTATGACAAACTGAATGATGTGTTGGATTACGGGGATAAGTTG 699
                        *  *  *  * *      *  *  * ***   **   *        *   * * **  *

consensus_13235#2      CTG----CACAACTTCTCAAGGGAGCAGCAGGGGATGCCTGGCC--CGACAACGGCGAAG 340
consensus_13235#3      CTG----CACAACTTCTCAAGGGAGCAGCAGGGGATSC-TGGCC--CGACAAACGCGAA- 157
consensus_13235#0      CTG----CACAACTTCTCAAGGGAGCAGCAGGGGATGCCTGGCC--CGACAACGGCGAAG 1962
consensus_13235#1      CTGTTGGCACCGCCGCCGATGCATGGGGAGTGGCTCCCACGGGCTGCGGTGTTTGTGCTG 759
                       ***    ***  *  *  * *   *  *   **    *  ** *  **      * *   

consensus_13235#2      GCTGACCTCGACATCCCCGAGTCGGTAGGGCTGTATGC--TGCCCAGCCTTCTTCTGTCA 398
consensus_13235#3      --CSACCTCGACATCCCCGAGTCGT--AGGCTGTACGC--TGCC-AGCCTTCTTCTGTCA 210
consensus_13235#0      GCCGACCTCGACATCCCCGAGTCGGTAGGGCTGTACGC--TGCCCAGCCTTCTTCTGTCA 2020
consensus_13235#1      GTGGATCTCATGGTTGTCATGGTGAGCCGGCCAAAAGGAATATTTAAGGAGTTCGGAAAG 819
                           * ***    *   *  *  *    ***   * *   *    *      *       

consensus_13235#2      AGAGGCTGATC--GAACCGAGCTCGGTGCGACGCAGTAGCAGGAGACGGCTATCCTGACA 456
consensus_13235#3      AGAGGCTGATC--GAA-------------------------------------------- 224
consensus_13235#0      AGAGGCTGATC--GAACCGAGCTCGGTGCGACGCAGTAGCAGGAGGCGGCTATCCTGACA 2078
consensus_13235#1      AGAATTCATTCAGGACTGGAGCTCATTCGTGGGGAACTCTCGAAGCTTGGGATTNTGGAT 879
                       ***      **  **                                             

consensus_13235#2      AAAATCCTGATATGATGTCTGGGGTGCCTGCCCATCAAATGGGGGCAATGGAGCAGCAGC 516
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      AAAATCCTGACCTGATGTCTGGGGTGCGTGCCCATCAAATGGGGGCAATGGAGCAGCAGC 2138
consensus_13235#1      GGTGTTACANAGGCAAATTTNGGACAC-TCTACAATATGGNCCAGCTGGCCTNTATTTGA 938
                                                                                   

consensus_13235#2      ATGCTCACATACCAA--CTCTTGGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGT 574
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      ATGCTCACATACCAAATCTCTTGGGATATAGCAGCAATGGAAGAAGAGCTGTGACATTGT 2198
consensus_13235#1      TTGCTTTTACCTCAATTTTTGGAAAATAAAGTTGCTGTGGAACTCACGAGATCAGAATTC 998
                                                                                   

consensus_13235#2      TTGAGGTTGTAGGTGCTGATTTATTCCATTGGTGGTTTATTTG-TAGTTAATTATGCATT 633
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      GTGAGGTTGTAGGTGCTGATTTATTCCATTGGTTGTTTATTTG-TAGTTAATTATGCATT 2257
consensus_13235#1      GTTGAAGCCCAAGAGGCTTTAGCTCAGATGATAAACTGGTTTACTCGTTTCCCAACAATT 1058
                                                                                   

consensus_13235#2      ATAGATTGCTCTGTAAACAGATTAAGAGGTAGCAAAAGAACCGAGTTGGTGTCGTATGGG 693
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      ATAGATTGCTCTGTAAACAGATTAAGAGGTAGCAAAAGAACCGAGTTGGTATCGTATGGG 2317
consensus_13235#1      CTCCGAGGTTGTGAAAACACAATC-GAAATGCTAAGGGGACAATATGCACACTCTGTCGG 1117
                                                                                   

consensus_13235#2      TAGAAACTAGAAAGTAGGATTCCAGCTTAGGAAAACAAAAGGTAGCTGCGGATTGAATTC 753
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      TAGAAACTAGAAAG----------------GAAAACAAAAGGTAGCTGCGGATTGAATTC 2361
consensus_13235#1      CTGCTTTGATGAGGCCGCTTTCCATTTCCTTGAAGCAGCAAG-GCTGACGGATAGCAGAT 1176
                                                                                   

consensus_13235#2      TGTTGGTGATCATTTGTAGTTAAACAATGTAAAAATTGTGAAGTAAACAGAGGAAGTGAG 813
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      TGTTGGTGATCATTTGTAGTTAAACAATCTAAAGATTGTGAAGTAAACGGAGG------- 2414
consensus_13235#1      CAATGCAATCTATGTGCCAAGTATATGCATCAGTATCCTACATTTGCATGGGTGATGCAG 1236
                                                                                   

consensus_13235#2      AAC--------------------------------------------------------- 816
consensus_13235#3      ------------------------------------------------------------
consensus_13235#0      ------------------------------------------------------------
consensus_13235#1      AATCAACTTCACAGGCACTAGAATTGGTTGGTCCTGCTTATAGAACCATGGACTCATTTG 1296
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)