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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13255#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1763 fasta sequence
[ATCTTCCTCCATCTGCGTATTTTCCAACACATCTCTCTTGCAGTTCGTTTCAAGTCTTTCATTAAGTAAAACTTTCTGAACATTTGAAGTGCAACGGAGCTGGCGTTTTATGGCTTTTCCTATGAAGCAATCCACATCTCTGATATAGATGTGTACTCGTTCTGAACATGACAAGTTCTCAGGTATTTCTCTGTTGATGAACTGCCTCCACACCTGCAGTGACAAGAAGACACTGAAGAAGTGGTTTTTCATCGACAAGACAGTTGGCTAAATTCAGCAGTGCACTCGTCCTTAAAGCGATCGATCATACTTCTTTCTTGATCTCATCATCCTAAATTTTCCCAAAT-GGATTTGAGCAATAGCTCACCTGTCATCACCGATCCGGT-GGCGATCAGCCAGCAGTTGTTGGGCGGCCTGCCTTCAAATCTGATGCAGTTTTCAGTCATGCCCGGTGGCTACTCCAGCTCTGGCATGAACGTTGGTGTCAGTAGGCTCAAAATCGAGGAAGTCCTTGTCAATGGACTGCTTGATGCCATGAAATCCTCGTCACCTCGCAGGAGGCTGAATGTAGCATTTGGCGAGGACAATTCATCTGAAGAAGAAGACCCTGCTTACAGCGCTTGGATGGCAAAATGTCCTTCTGCTTTGGCTTCCTTCAAGCAAATTGTAGCCAGTGCACAAGGGAAGAAGATTGCTGTGTTTCTAGACTATGACGGCACACTGTCGCCTATTGTGGATGATCCTGACAAAGCAGTGATGTCTCCCGTGATGAGAGCTGCTGTGAGAAATGTTGCGAAGTACTTCCCCACTGCAATTGTCAGCGGAAGGTCCCGCAATAAGGTGTTTGAATTTGTAAAACTGAAGGAGCTTTATTATGCTGGAAGCCATGGTATGGACATAATGGCACCTTCAGCAAATCATGAGCACAGTGCTGAAAAGAGCAAACAGGCCAATCTCTTCCAACCTGCACACGACTTTCTGCCAATGATCGATGAGGTTACCAAGTCCCTCTTGCAAGTTGTCAGTGGAATTGAAGGTGCAACTGTTGAGAACAACAAATTCTGCGTTTCTGTACATTATCGCAACGTTGCAGAGAAGGATTGGAAACTGGTCGCACGGCTCGTAAACGAAGTGCTGGAGGCTTTTCCTCGTCTCAAAGTAACCAATGGACGAATGGTTTTAGAGGTTCGTCCGGTGATCGACTGGGACAAGGGAAAGGCTGTGGAGTTTCTGCTCCAGTCACTCGGGCTAAATGACTCTGAAAATGTGATCCCCATCTACATTGGAGACGACAGAACTGACGAAGACGCTTTCAAGGTACTTCGACAGCGAAATTGCGGTTATGGAATACTAGTTTCACAGGTTCCCAAGGAAACTGAAGCCTTCTACTCGCTGAGAGATCCATCTGAAGTGATGGAGTTCCTCAA-TTTCTTGGTGAGATGGAAGAAGCACTCAGTGTGAAAAAAAGAAGA-CAGTCTGAGCAGGTTTTACTAATACTACTCCGGCAGAAATAACTGTAGTTTCCGAGGCGACAATTTTGAAGCATTGGACGCTGTAGATAGATGTAATAACTCTCTAGATATGTGGTTCCAATTCATTCTTATTGATCGATGTTATTGTATTGTTC--ATGTTCTCCACCGCTGAGAAAAATTAATCAGTGATGGTTGATCCGGTCTCTTGCCATTGTAAGTTGTAAGCAAGAAGGCCCTCTTCTTAGTATCCATGCTGATGAACGAAATTAAAACCTTCAAAAAAAAAAAAAA]
[+] EMBL AK103391 [ATCTTCCTCCATCTGCGTATTTTCCAACACATCTCTCTTGCAGTTCGTTTCAAGTCTTTCATTAAGTAAAACTTTCTGAACATTTGAAGTGCAACGGAGCTGGCGTTTTATGGCTTTTCCTATGAGGCAATCCACATCTCTGATATAGATGTGTACTCGTTCTGAACATGACAAGTTCTCAGGTATTTCTCTGTTGATGAACTGCCTCCACACCTGCAGTGACAAGAAGACACTGAAGAAGTGGTTTTTCATCGACAAGACAGTTGGCTAAATTCAGCAGTGCACTCGTCGTTAAAGCGATCGATCATACTTCTTTCTTGATCTCATCATCCTAAATTTTCCCAAAT GGATTTGAGCAATAGCTCACCTGTCATCACCGATCCGGT GGCGATCAGCCAGCAGTTGTTGGGCGGCCTGCCTTCAAATCTGATGCAGTTTTCAGTCATGCCCGGTGGCTACTCCAGCTCTGGCATGAACGTTGGTGTCAGTAGGCTCAAAATCGAGGAAGTCCTTGTCAATGGACTGCTTGATGCCATGAAATCCTCGTCACCTCGCAGGAGGCTGAATGTAGCATTTGGCGAGGACAATTCATCTGAAGAAGAAGACCCTGCTTACAGCGCTTGGATGGCAAAATGTCCTTCTGCTTTGGCTTCCTTCAAGCAAATTGTAGCCAGTGCACAAGGGAAGAAGATTGCTGTGTTTCTAGACTATGACGGCACACTGTCGCCTATTGTGGATGATCCTGACAAAGCAGTGATGTCTCCCGTGATGAGAGCTGCTGTGAGAAATGTTGCGAAGTACTTCCCCACTGCAATTGTCAGCGGAAGGTCCCGCAATAAGGTGTTTGAATTTGTAAAACTGAAGGAGCTTTATTATGCTGGAAGCCATGGTATGGACATAATGGCACCTTCAGCAAATCATGAGCACAGTGCTGAAAAGAGCAAACAGGCCAATCTCTTCCAACCTGCACACGACTTTCTGCCAATGATCGATGAGGTTACCAAGTCCCTCTTGCAAGTTGTCAGTGGAATTGAAGGTGCAACTGTTGAGAACAACAAATTCTGCGTTTCTGTACATTATCGCAACGTTGCAGAGAAGGATTGGAAACTGGTCGCACGGCTCGTAAACGAAGTGCTGGAGGCTTTTCCTCGTCTCAAAGTAACCAATGGACGAATGGTTTTAGAGGTTCGTCCGGTGATCGACTGGGACAAGGGAAAGGCTGTGGAGTTTCTGCTCCAGTCACTCGGGCTAAATGACTCTGAAAATGTGATCCCCATCTACATTGGAGACGACAGAACTGACGAAGACGCTTTCAAGGTACTTCGACAGCGAAATTGCGGTTATGGAATACTAGTTTCACAGGTTCCCAAGGAAACTGAAGCCTTCTACTCGCTGAGAGATCCATCTGAAGTGATGGAGTTCCTCAA TTTCTTGGTGAGATGGAAGAAGCACTCAGTGTGAAAAAAAGAAGA CAGTCTGAGCAGGTTTTACTAATACTACTCCGGCAGAAATAACTGTAGTTTCCGAGGCGACAATTTTGAAGCATTGGACGCTGTAGATAGATGTAATAACTCTCTAGATATGTGGTTCCAATTCATTCTTATTGATCGATGTTATTGTATTGTTC ATGTTCTCCACCGCTGAGAAAAATTAATCAGTGATGGTTGATCCGGTCTCTTGCCATTGTAAGTTGTAAGCAAGAAGGCCCTCTTCTTAGTATCCATGCTGATGAACGAAATTAAAACCTTCA ]
[+] EMBL CF324118 [ TTCCTCCATCTGCGTATTTTCCAACACATCTCTCTTGCAGTTCGTTTCAAGTCTTTCATTAAGTAAAACTTTCTGAACATTTGAAGTGCAACGGAGCTGGCGTTTTATGGCTTTTCCTATGAAGCAATCCACATCTCTGATATAGATGTGTACTCGTTCTGAACATGACAAGTTCTCAGGTATTTCTCTGTTGATGAACTGCCTCCACACCTGCAGTGACAAGAAGACACTGAAGAAGTGGTTTTTCATCGACAAGACAGTTGGCTAAATTCAGCAGTGCACTCGTCCTTAAAGCGATCGATCATACTTCTTTCTTGATCTCATCATCCTAAATTTTCCCAAAT GGATTTGAGCAATAGCTCACC ]
[+] EMBL CF307400 [ TCCTCCATCTGCGTATTTTCC ACACATCTCTCTTGCAGTTCGTTTCAAGTCTTTCATTAAGTAAAACTTTCTGAACATTTGAAGTGCAACGGAGCTGGCGTTTTATGGCTTTTCCTATGAAGCAATCCACATCTCTGATATAGATGTGTACTCGTTCTGAACATGACAAGTTCTCAGGTATTTCTCTGTTGATGAACTGCCTCCACACCTGCAGTGACAAGAAGACACTGAAGAAGTGGTTTTTCATCGACAAGACAGTTGGCTAAATTCAGCAGTGCACTCGTCCTTAAAGCGATCGATCATACTTCTTTCTTGATCTCATCATCCTAAATTTTCCCAAAT GGATTTGAGCAATAGCTCACCTGTCATCACCGATCCGGT GGCGATCAGCCAGCAGTTGTTGGGCGGCCTGCCTTCAAATCTGATGCAGTTTTCAGTCATGCCCGGTGGCTACTCCAGCTCTGGCATGAACGTTGGTGTCAGTAGGCTCAAAATCGAGGAAGTCCTTGTCAATGGACTGCTTGATGCCATGAAATCCTCGTCACCTCGCAGGAGGCTGAATGTAG ]
[+] EMBL CF305564 [ TCCTCCATCTGCGTATTTTCC ACACATCTCTCTTGCAGTTCGTTTCAAGTCTTTCATTAAGTAAAACTTTCTGAACATTTGAAGTGCAACGGAGCTGGCGTTTTATGGCTTTTCCTATGAAGCAATCCACATCTCTGATATAGATGTGTACTCGTTCTGAACATGACAAGTTCTCAGGTATTTCTCTGTTGATGAACTGCCTCCACACCTGCAGTGACAAGAAGACACTGAAGAAGTGGTTTTTCATCGACAAGACAGTTGGCTAAATTCAGCAGTGCACTCGTCCTTAAAGCGATCGATCATACTTCTTTCTTGATCTCATCATCCTAAATTTTCCCAAAT GGATTTGAGCAATAGCTCACCTGTCATCACCGATCCGGT GGCGATCAGCCAGCAGTTGTTGGGCG ]
[+] EMBL OSC104071 [ CGTATTTTCCAACACATCTCTCTTGCAGTTCGTTTCAAGTCTTTCATTAAGTAAAACTTTCTGAACATTTGAAGTGCAACGNAGCTGGCGTTTTATGGCTTTTCCTATGAAGCAATCCACATCTCTGATATAGATGTGTACTCGTTCTGAACATGACA AGGTATTTCTCTGTTGATGAACTGCCTCCACACCTGCAGTGACAAGAAGACACTGAAGAAGTGGTTTTTCATCGACAAGACAGTTGGCTAAATTCAGCAGTGCACTCGTCCTTAAAGCGATCGATCATACTTCTTTCTTGATCTCATCATCCTAAATTTTCCCAAATGGGATTTGAGCAATAGCTCACCTGTCATCACCGATCCGGTGGGCGATCAGCC ]
[+] EMBL CF323582 [ TCAGGTATTTCTCTGTTGATGAACTGCCTCCACACCTGCAGTGACAAGAAGACACTGAAGAAGTGGTTTTTCATCGACAAGACAGTTGGCTAAATTCAGCAGTGCACTCGTCCTTAAAGCGATCGATCATACTTCTTTCTTGATCTCATCATCCTAAATTTTCCCAAAT GGATTTGAGCAATAGCTCACCTGTCATCACCGATCCGGT GGCGATCAGCCAGCAGTTGTTGGGCGGCCTGCCTTCAAATCTGATGCAGTTTTCAGTCATGCCCGGTGGCTACTCCAGCTCTGGCATGAACGTTGGTGTCAGTAGGCTCAAAATCGAGGAAGTCCTTGTCAATGGACTGCTTGATGCCATGAAATCCT ]
[+] EMBL AK059390 [ AGTTTTCAGTCATGCCCGGTGGCTACTCCAGCTCTGGCATGAACGTTGGTGTCAGTAGGCTCAAAATCGAGGAAGTCCTTGTCAATGGACTGCTTGATGCCATGAAATCCTCGTCACCTCGCAGGAGGCTGAATGTAGCATTTGGCGAGGACAATTCATCTGAAGAAGAAGACCCTGCTTACAGCGCTTGGATGGCAAAATGTCCTTCTGCTTTGGCTTCCTTCAAGCAAATTGTAGCCAGTGCACAAGGGAAGAAGATTGCTGTGTTTCTAGACTATGACGGCACACTGTCGCCTATTGTGGATGATCCTGACAAAGCAGTGATGTCTCCCGTGATGAGAGCTGCTGTGAGAAATGTTGCGAAGTACTTCCCCACTGCAATTGTCAGCGGAAGGTCCCGCAATAAGGTGTTTGAATTTGTAAAACTGAAGGAGCTTTATTATGCTGGAAGCCATGGTATGGACATAATGGCACCTTCAGCAAATCATGAGCACAGTGCTGAAAAGAGCAAACAGGCCAATCTCTTCCAACCTGCACACGACTTTCTGCCAATGATCGATGAGGTTACCAAGTCCCTCTTGCAAGTTGTCAGTGGAATTGAAGGTGCAACTGTTGAGAACAACAAATTCTGCGTTTCTGTACATTATCGCAACGTTGCAGAGAAGGATTGGAAACTGGTCGCACGGCTCGTAAACGAAGTGCTGGAGGCTTTTCCTCGTCTCAAAGTAACCAATGGACGAATGGTTTTAGAGGTTCGTCCGGTGATCGACTGGGACAAGGGAAAGGCTGTGGAGTTTCTGCTCCAGTCACTCGGGCTAAATGACTCTGAAAATGTGATCCCCATCTACATTGGAGACGACAGAACTGACGAAGACGCTTTCAAGGTACTTCGACAGCGAAATTGCGGTTATGGAATACTAGTTTCACAGGTTCCCAAGGAAACTGAAGCCTTCTACTCGCTGAGAGATCCATCTGAAGTGATGGAGTTCCTCAA TTTCTTGGTGAGATGGAAGAAGCACTCAGTGTGAAAAAAAGAAGA CAGTCTGAGCAGGTTTTACTAATACTACTCCGGCAGAAATAACTGTAGTTTCCGAGGCGACAATTTTGAAGCATTGGACGCTGTAGATAGATGTAATAACTCTCTAGATATGTGGTTCCAATTCATTCTTATTGATCGATGTTATTGTATTGTTC ATGTTCTCCACCGCTGAGAAAAATTAATCAGTGATGGTTGATCCGGTCTCTTGCCATTATAAGTTGTAAGCAAGAAGGCCCTCTTCTTAGTATCCATGCTGATGAACGAAATTAAAACCTTCA ]
[+] EMBL AU166371 [ CATGCCCGGTGGCTACTCCAGCTCTGGCATGAACGTTGGTGTCAGTAGGCTCAAAATCGAGGAAGTCCTTGTCAATGGACTGCTTGATGCCATGAAATCCTCGTCACCTCGCAGGAGGCTGAATGTAGCATTTGGCGAGGACAATTCATCTGAAGAAGAAGACCCTGCTTACAGCGCTTGGATGGCAAAATGTCCTTCTGCTTTGGCTTCCTTCAAGCAAATTGTAGCCAGTGCACAAGGGAAGAAGATTGCTGTGTTTCTAGACTATGACGGCACACTGTCGCCTATTGTGGATGATCCTGACAAAGCAGTGATGTCTCCCGTGATGAGAGCTGCTGTGAGAAATGTTGCGAAGTACTTCCCCACTGCAATTGTCAGCGGAAGGTCCCGCAATAAGGTGTTTGAATTTGTAAAACTGAAGGAGCTTTAT ]
[+] EMBL CB096926 [ GGAGTTTCTGCTCCAGTCACTCGGGCTAAATGACTCTGAAAATGTGATCCCCATCTACATTGGAGACGACAGAACTGACGAAGACGCTTTCAAGGTACTTCGACAGCGAAATTGCGGTTATGGAATACTAGTTTCACAGGTTCCCAAGGAAACTGAAGCCTTCTACTCGCTGAGAGATCCATCTGAAGTGATGGAGTTCCTCAA TTTCTTGGTGAGACGGAAGAAGCACTCAGTGTGAAAAAAAGAAGA CAGTCAGAGCAGGTTTTACTAATACTACTCCGGCAGAAATAACTGTAGTTTCCGAGGCGACAATTTTGAAGCATTGGACGCTGTAGATAGATGTAATAACTCTCTAGATATGTGGTTCCAATTCATTCTTATTGATCGATGTTATTGTATTGTTCATATGTTCTCCACCGCTGAGAAAAATTAATCAGTGATGGTTGATCCGGTCTCTTGCCATTGTAAGTTGTAAGCAAGAAGACCCTCTTCTTAGTATCCATGCTGATGAACGAAATTAAAACCTTCAtttttcg ]
[+] EMBL OS1200A [ TGTGATCCCCATCTACATTGGAGACGACAGAACTGACGAAGACGCTTTCAAGGTACTTCGACAGCGAAATTGCGGTTATGGAATACTAGTTTCACAGGTTCCCAAGGAAACTGAAGCCTTCTACTCGCTGAGAGATCCATCTGAAGTGATGGAGTTCCTCAA TTTCTTGGTGAGATGGAAGAAGCACTCAGTGTGAAAAAAAGAAGA CAGTCTGAGCAGGTTTTACTAATACTACTCCGGCAGAAATAACTGTAGTTTCCGAGGCGACAATTTTGAAGCATTGGACGCTGTAGATAGATGTAATAACTCTCTAGATATGTGGTTCCAATTCATTCTTATTGATCGATGTTATTGTATNGTTC ATGTTCTCCACCGNTGAGAAAAATTNATCAGTGATGGTTGATCCGGTCTCTTGCCATTGTAAGTTGTAAGCAAGNGGGGCCTNTT TTAGNATCCATGCTGATGGANGGAATT NAACCTTa ]
[+] EMBL AU166372 [ CGACAGCGAAATTGCGGTTATGGAATACTAGTTTCACAGGTTCCCAAGGAAACTGAAGCCTTCTACTCGCTGAGAGATCCATCTGAAGTGATGGAGTTCCTCAA TTTCTTGGTGAGATGGAAGAAGCACTCAGTGTGAAAAAAAGAAGA CAGTCTGAGCAGGTTTTACTAATACTACTCCGGCAGAAATAACTGTAGTTTCCGAGGCGACAATTTTGAAGCATTGGACGCTGTAGATAGATGTAATAACTCTCTAGATATGTGGTTCCAATTCATTCTTATTGATCGATGTTATTGTATTGTTC ATGTTCTCCNCCGCTGAGAAAAATTAATCAGTGATGGTTGATCCGGTCTCTTGCCATTGTAAGTTGTAAGCAAGAAGGCCCTCTTCTTAGTATCCATGCTGATGAACGAAATTAAAACCTTCAAAAAAAA ]
[+] EMBL C96636 [ tttcCCCCAATTTTCTTGGTGAGATGGAAGAAGCACCCCGTGTGAAAAAAGGAAGACCAGTCTGAGCNGGTTTTACTNATACTACTCCGGCNGAAATAACTGTNGTTTCCGAGGCGACAATTTTGAAGCATTGGACGCTGTAGATAGATNTAATAACTCTCTAGATATGTGGTTCCAATTCATTCTTATTGATCGATGTTATTGTATTGTTC ATGTTCTCCACCGCTGAGAAAAATTAATCNGTGATGGTTGATCCGGTCTCTTGCCATTGTAAGTTNTAAGCAAGAAGGCCCTCTTCTTNGTATCCATGCTGATGAACGAAATTAAAACCTTCAAAAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||