These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13257#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 3734 fasta sequence [CTTTCGCCTCCGCGACGCATATGCCTCCGCCTCCGCCTCGTCGCGGCGCCCCCAAACCCTAGCCCGGCGCGGCGAGTCCCCCATCGGCGGCGGGAGCGGCGGGAGTAGGCGGGAAGGCGGGATCTCCTCCGTCCCACATGGCGGCGGCGGCGGCGGTTGCGGGGGCGGGCGGGGTGGGGCACGTGGTGGAGAGGTTCAGGGCGAGGCTGCGGGAGGAGCAGGAGGAGGAGGAGGGGGGAGGCGGGGAGGTGGCGGCGGCGGCGGTGGTGCGGGTGTACGTGGAGGTGCTCTCGGAGCTCACGTTCAACTGCAAGCCCATCATCACCGAGCTCACCATCATCGCCGGGCAGCACGCGGCCCTCGCCGCGAGGGGGATCGCCGACGCCATCTGCGCCCGCATCGCGGAGGTGTCTGCCGACCAGAAATTACCATCTTTGTATCTGCTAGACAGTATTGTGAAGAACATAGGACGAGAATATGTAGGGCATTTTGCCGCTAGGTTGCAGAAGGTATTTTGTGATGCCTATAGGAAAGTTCACCGCAATCAGCATGCTGCAATGCGACACCTCTTTGGTACCTGGTCACAAGTGTTCCCTTCCTCTGTGCTACGCGGAATTGAGGATGAGCTTCAGTTTTCCCCCTTAGAGAATAAGCGCTCTGCCACAGCGACTGATATCCGACAGTCAGAGTCGATATCTCCTAGACTGTCTCATGCCATTCATGTAAATCCAAAATATTTAGAAGCACAACAACAATTTAAGCAGTCAACTTCGGTGCATCAACCAATAACTCGTGGAAATCGGCAAATGAATGATGTGGAAGAGGATCAAATAAATGGTTTAACATCTAAAAGTTCGCGAGGATGGCCTGCAACTAATTCAAAGCTCCAGAAGTCTACTATGCTGTATGCTGACGATCTTGATCAACAAGAGGCATTTTGTTCACATACTGGGTTGATAAGGCCAAGTTCGCCACATCTTTTAAGCAAACATCCTTCCATACTCAATACAGAAGGACCATTAGCCAATTCAAGAAGAACCATGTCAAGATCACCACCTCTTGATGTGCTCCCTAGAAATGCATCCCCCAAGAGAGCTCTGGAGAGGCCACCACTATCGCATTCTGTTCTAGGACCTGACCCCAGAAGATTGCCTGATCGAAATGGTTGGTTTGAACGGAAGTGGGCTTTTGAGGATGGTGCACAACGGCCTTCGATGAGCATACTTGATGAAGAATATAGAAAGCAAAGTGCAAGGGAACTTATTGATGCTTATGGAAATTCTCAAGGAAAAGATGTCGATGAAAGGCTTCCCAAGATGCAACGTCTAGATTCAAATGGCATGGCAGGCAGACCTAGTGCACAAAAATGGCTAACTTCGGAGGAAGAAGAGTATACTTGGGAAGATATGAGTCCTACTTTAACTGATCGAAACAGAACCAGCGTGCCCTCTTTACCTCCCCTTGGAACCCTGAGAGCTGGATTTCTTGGGCCAAACAGTGGACTACTGGAATCTGATATTGTGAGGCACAGTTGGCCAGGCCAGGCTCCTCGACCAGCAATTGATGGGCCACCACTAAATCTCGAAGATAGAATTCCTACTAACGGGCCCGTTGACAGAACTAATAACAGGAGATATCCAGGCAATTTTGGTGTTCAGAATGGTGCCTTTTTAGATTACCAGAGTTCTGAACATACTCTTGATCCTGGGAGAACTACCATGCCAGTTCCACCTTGGCAGCAGACTATTGGTCAGCCGTTGCGGGTACAAGCGCCCCAGCCTGCATCAATTCTGAATAGAATGCCACTGCCTACTGATAGTGAAGTGCCAGTCAAGAGGTTGGCCACTGGTGGTACATATGATGCGCTGAATGTAGATATTCCATTGTTGGAGAAGCAAAGGTCCTCACCTGCTCATGCTCCAATGGAATGGCCTCTTAATACACAGTCACTAACTATACAACCAATTCCACCTGATACCAAACATCCTAGAGGCGCATCAGATGGTCTAGATTCTAGACCATTTATTAGCCAAGGGTCCAGTTCGTCTGTTTTTGTTCCACAGCATCATGCCTTGGATCGGAGAACAATGAATGCTGATGATTTAGCTCAACCATCATATCAGCATCCAGATTTGTTGTCATTGAGTCAACAAAATCAGGGCACAGTTTTGGGAAACCAAGGTCAACCTCATCACCCGCCGCAATTTCATCCCCATCCTCATTCTCACCTTCAAGAGACAATTAGAAGCTTTGCCCCCAGTATGTCTGTTGCACCTCCACAAAATATATTCCATGGACAAGGAGGTAGCGCAGCTGCACTCCTGCCAAGTTCTTTCCCTGTACCACCTGCAGTACCACCCTATGGCTTGCAGTCTATGCCTGGATTTCCTTTGCCATCGTTACCTTCAGGACCACCTCCTCCATCGCAGATAGGTCCATCATCATCGCAAGTTGGGGGCCCTCCACTTGTCTCTGGATTGTTAAGTAACCTTATGCAGCATGGTATAATCTCATTGCAACCACCCAGCCAACCTCAGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGAACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCCTTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACAGAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGTTAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAGTTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACATGTGCTTTATGTC-AAGA-GCCATTTGAAGATTTCTACAGTGATGAAA-CTGAAGAGTGGA-TGTACAAAGGTGCAGTTT-ATATGAATGCACCAGATGGAAATA-TTGGTGGTCTAGAAAGGTCGCAGTTGGGACCTATTGTCCATGCTAAATGT-CTAT-CTGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTCCCACCATCTCACATGCAGTGTGCTGCTTTTCCATTATTATAGTATATTTGGAAATCCCCATGTCTACTAGGTGATAGGCAGCCCTAGTTCAGAACGGTGCAATCACTCCACTGAACTTGCGAAACAATATCTTTCTTTCTTGTTTCCCTTCTTTCCTTTTGTGCAGGACAATATCAGTCGGCTACCTGGCTGGTAACTTCCAAAATCGAAAGGACATGTAAGGCGATCAAGGATGGAAGCAAAATCATCAGCTTAATTTCCAGAAAATGAAGGAGATGCTCTCTTCTTGAATTTTCCCCCTTTTTTCATACTCTTTTGTATGGCATGGCGTTCTGGTATTAACACAACAGTTCATTTTGGTCGCATGTATGACTCATCTTGCTGGATATGTTTGCACATGTCAAGTTCAGACTAGATTGTTTTAAAGTATGCT] [+] EMBL AK099689 [CTTTCGCCTCCGCGACGCATATGCCTCCGCCTCCGCCTCGTCGCGGCGCCCCCAAACCCTAGCCCGGCGCGGCGAGTCCCCCATCGGCGGCGGGAGCGGCGGGAGTAGGCGGGAAGGCGGGATCTCCTCCGTCCCACATGGCGGCGGCGGCGGCGGTTGCGGGGGCGGGCGGGGTGGGGCACGTGGTGGAGAGGTTCAGGGCGAGGCTGCGGGAGGAGCAGGAGGAGGAGGAGGGGGGAGGCGGGGAGGTGGCGGCGGCGGCGGTGGTGCGGGTGTACGTGGAGGTGCTCTCGGAGCTCACGTTCAACTGCAAGCCCATCATCACCGAGCTCACCATCATCGCCGGGCAGCACGCGGCCCTCGCCGCGAGGGGGATCGCCGACGCCATCTGCGCCCGCATCGCGGAGGTGTCTGCCGACCAGAAATTACCATCTTTGTATCTGCTAGACAGTATTGTGAAGAACATAGGACGAGAATATGTAGGGCATTTTGCCGCTAGGTTGCAGAAGGTATTTTGTGATGCCTATAGGAAAGTTCACCGCAATCAGCATGCTGCAATGCGACACCTCTTTGGTACCTGGTCACAAGTGTTCCCTTCCTCTGTGCTACGCGGAATTGAGGATGAGCTTCAGTTTTCCCCCTTAGAGAATAAGCGCTCTGCCACAGCGACTGATATCCGACAGTCAGAGTCGATATCTCCTAGACTGTCTCATGCCATTCATGTAAATCCAAAATATTTAGAAGCACAACAACAATTTAAGCAGTCAACTTCGGTGCATCAACCAATAACTCGTGGAAATCGGCAAATGAATGATGTGGAAGAGGATCAAATAAATGGTTTAACATCTAAAAGTTCGCGAGGATGGCCTGCAACTAATTCAAAGCTCCAGAAGTCTACTATGCTGTATGCTGACGATCTTGATCAACAAGAGGCATTTTGTTCACATACTGGGTTGATAAGGCCAAGTTCGCCACATCTTTTAAGCAAACATCCTTCCATACTCAATACAGAAGGACCATTAGCCAATTCAAGAAGAACCATGTCAAGATCACCACCTCTTGATGTGCTCCCTAGAAATGCATCCCCCAAGAGAGCTCTGGAGAGGCCACCACTATCGCATTCTGTTCTAGGACCTGACCCCAGAAGATTGCCTGATCGAAATGGTTGGTTTGAACGGAAGTGGGCTTTTGAGGATGGTGCACAACGGCCTTCGATGAGCATACTTGATGAAGAATATAGAAAGCAAAGTGCAAGGGAACTTATTGATGCTTATGGAAATTCTCAAGGAAAAGATGTCGATGAAAGGCTTCCCAAGATGCAACGTCTAGATTCAAATGGCATGGCAGGCAGACCTAGTGCACAAAAATGGCTAACTTCGGAGGAAGAAGAGTATACTTGGGAAGATATGAGTCCTACTTTAACTGATCGAAACAGAACCAGCGTGCCCTCTTTACCTCCCCTTGGAACCCTGAGAGCTGGATTTCTTGGGCCAAACAGTGGACTACTGGAATCTGATATTGTGAGGCACAGTTGGCCAGGCCAGGCTCCTCGACCAGCAATTGATGGGCCACCACTAAATCTCGAAGATAGAATTCCTACTAACGGGCCCGTTGACAGAACTAATAACAGGAGATATCCAGGCAATTTTGGTGTTCAGAATGGTGCCTTTTTAGATTACCAGAGTTCTGAACATACTCTTGATCCTGGGAGAACTACCATGCCAGTTCCACCTTGGCAGCAGACTATTGGTCAGCCGTTGCGGGTACAAGCGCCCCAGCCTGCATCAATTCTGAATAGAATGCCACTGCCTACTGATAGTGAAGTGCCAGTCAAGAGGTTGGCCACTGGTGGTACATATGATGCGCTGAATGTAGATATTCCATTGTTGGAGAAGCAAAGGTCCTCACCTGCTCATGCTCCAATGGAATGGCCTCTTAATACACAGTCACTAACTATACAACCAATTCCACCTGATACCAAACATCCTAGAGGCGCATCAGATGGTCTAGATTCTAGACCATTTATTAGCCAAGGGTCCAGTTCGTCTGTTTTTGTTCCACAGCATCATGCCTTGGATCGGAGAACAATGAATGCTGATGATTTAGCTCAACCATCATATCAGCATCCAGATTTGTTGTCATTGAGTCAACAAAATCAGGGCACAGTTTTGGGAAACCAAGGTCAACCTCATCACCCGCCGCAATTTCATCCCCATCCTCATTCTCACCTTCAAGAGACAATTAGAAGCTTTGCCCCCAGTATGTCTGTTGCACCTCCACAAAATATATTCCATGGACAAGGAGGTAGCGCAGCTGCACTCCTGCCAAGTTCTTTCCCTGTACCACCTGCAGTACCACCCTATGGCTTGCAGTCTATGCCTGGATTTCCTTTGCCATCGTTACCTTCAGGACCACCTCCTCCATCGCAGATAGGTCCATCATCATCGCAAGTTGGGGGCCCTCCACTTGTCTCTGGATTGTTAAGTAACCTTATGCAGCATGGTATAATCTCATTGCAACCACCCAGCCAACCTCAGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGAACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCCTTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACAGAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGTTAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAGTTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACATGTGCTTTATGTC AAGA GCCATTTGAAGATTTCTACAGTGATGAAA CTGAAGAGTGGA TGTACAAAGGTGCAGTTT ATATGAATGCACCAGATGGAAATA TTGGTGGTCTAGAAAGGTCGCAGTTGGGACCTATTGTCCATGCTAAATGT CTAT CTGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTC ] [+] EMBL CF303157 [ ggGATGCCTATAGGAAAGTTCACCGCAATCAGCATGCTGCAATGCGACACCTCTTTGGTACCTGGTCACAAGTGTTCCCTTCCTCTGTGCTACGCGGAATTGAGGATGAGCTTCAGTTTTCCCCCTTAGAGAATAAGCGCTCTGCCACAGCGACTGATATCCGACAGTCAGAGTCGATATCTCCTAGACTGTCTCATGCCATTCATGTAAATCCAAAATATTTAGAAGCACAACAACAATTTAAGCAGTCAACTTCGGTGCATCAACCAATAACTCGTGGAAATCGGCAAATGAATGATGTGGAAGAGGATCAAATAAATGGTTTAACATCTAAAAGTTCGCGAGGATGGCCTGCAACTAATTCAAAGCTCCAGAAGTCTACTATGCTGTATGCTGACGATCTTGATCAACAAGAGGCATTTTGTTCACATACTGGGTTGATAAGGCCAAGTTCGCCACATCTTTTAAGCAAACATCCTTCCATACTCAATACAGAAGGACCATTAGCCAATTCAAGAAGAACCATGTCAAGATCACCACCTCTTGATGTGCTCCCTAGAAATGCATCCCCCAAGAGAGCTCTGGAGAGGCCACCACTATCGCATTCTGTTCTAGGACCTGACCCCAGAAGATTGCCTGATCGAAATGGTTGGTTTGAACGGAAGTGGGCTTTTGAGGATGGTGCACAACGGCCTTCGATGAGCA ] [+] EMBL CB632334 [ CGACTGATATCCGACAGTCAGAGTCGATATCTCCTAGACTGTCTCATGCCATTCATGTAAATCCAAAATATTTAGAAGCACAACAACAATTTAAGCAGTCAACTTCGGTGCATCAACCAATAACTCGTGGAAATCGGCAAGTGAATGATGTGGAAGAGGATCAAATAAATGGTTTAACATCTAAAAGTTCGCGAGGATGGCCTGCAACTAATTCAAAGCTCCAGAAATCTACTATGCTGTATGCTGACGATCTTGATCAACAAGAGGCATTTCGTTCACATACTGGGTTGATAAGGCCAAGTTCGCCACATCTTTTAAGCAAACATCCTTCCATACTCAATACAGAAGGACCATTAGCCAATTCAAGAAGAACCATGTCAAGATCACCACCTCTTGATGTGCTCCCTAGAAATGCATCCCCCAAGAGAGCTCTGGAGAGGCCACCACTATCGCATTCTGTTCTAGGACCTGACCCCAGAAGATTGCCTGATCGAAATGGTTGGTTTGAACGGAAGTGGGCTTTTGAGGATGGTGCACAACGGCCTTCGATGAGCATACTTGATGAAGAATATAGAAAGCAAAGTGCAAGGGAACTTATTGATGCTTATGGAAATTCTCAAGGAAAAGATGTCGATGAAAGGCTTCCCAAGATGCAACGTCTAGATTCAAATGGCATGGCAGGCAGACCTAGTGCACAAAAATGGCTAACTTCGGAGGAAGAAGAGTATACTTGGGAAGATATGAGTCCTACTTTAACTGATCGAAACAGAAACAGCGTGC ] [+] EMBL BP184587 [ CTAACGGGCCCGTTGACAGAACTAATAACAGGAGATATCCAGGCAATTTTGGTGTTCAGAATGGTGCCTTTTTAGATTACCAGAGTTCTGAACATACTCTTGATCCTGGGAGAACTACCATGCCAGTTCCACCTTGGCAGCAGACTATTGGTCAGCCGTTGCGGGTACAAGCGCCCCAGCCTGCATCAATTCTGAATAGAATGCCACTGCCTACTGATAGTGAAGTGCCAGTCAAGAGGTTGGCCACTGGTGGTACATATGATGCGCTGAATGTAGATATTCCATTGTTGGAGAAGCAAAGGTCCTCACCTGCTCATGCTCCAATGGAATGGCCTCTTAATACACAGTCACTAACTATACAACCAATTCCACCTGATACCAAACATCCTAGAGGCGCATCAGATGGTCTAGATTCTAGACCATTTATTAGCCAAGGGTCCAGTTCGTCTGTTTTTGTTCCACAGCATCATGCCTTGGATCGGAGAACAATGAATGCTGATGATTTAGCTCAACCATCATATCAGCATCCAGATTTGTTGTCATTGAGTCAACAAAATCAGGGCACAGTTTTGGGAAACCAAGGTCAACCTCATCACCCGCCGCAATTTCATCCCCATCCTCATTCTCACCT ] [+] EMBL OSS1517A [ GAGAAGCAAAGGTCCTCACCTGCTCATGCTCCAATGGAATGGCCTCTTAATACACAGTCACTAACTATACAACCAATTCCACCTGATACCAAACATCCTAGAGGCGCATCAGATGGTCTAGATTCTAGACCATTTATTAGCCAAGGGTCCAGTTCGTCTGTTTTTGTTCCACAGCATCATGCCTTGGATCGGAGNACAATGAATGCTGATGATTTAGCTCAACCATCATATCAGCATCCAGA ] [+] EMBL BP184592 [ TGGATCGGAGAACAATGAATGCTGATGATTTAGCTCAACCATCATATCAGCATCCAGATTTGTTGTCATTGAGTCAACAAAATCAGGGCACAGTTTTGGGAAACCAAGGTCAACCTCATCACCCGCCGCAATTTCATCCCCATCCTCATTCTCACCTTCAAGAGACAATTAGAAGCTTTGCCCCCAGTATGTCTGTTGCACCTCCACAAAATATATTCCATGGACAAGGAGGTAGCGCAGCTGCACTCCTGCCAAGTTCTTTCCCTGTACCACCTGCAGTACCACCCTATGGCTTGCAGTCTATGCCTGGATTTCCTTTGCCATCGTTACCTTCAGGACCACCTCCTCCATCGCAGATAGGTCCATCATCATCGCAAGTTGGGGGCCCTCCACTTGTCTCTGGATTGTTAAGTAACCTTATGCAGCATGGTATAATCTCATTGCAACCACCCAGCCAACCTCAGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGAACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCCTTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTG ] [+] EMBL CF306629 [ ATCATCGCAAGTTGGGGGCCCTCCACTTGTCTCTGGATTGTTAAGTAACCTTATGCAGCATGGTATAATCTCATTGCAACCACCCAGCCAACCTCAGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGAACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCCTTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACAGAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGTTAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAGTTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACATGTGCTTTATGTC AAGA GCCATTTGAAGATTTCTACAGTGATGAAA CTGAAGAGTGGA TGTACAAAGGTGCAGTTT ATATGAA ] [-] EMBL CB632335 [ AGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGAACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCCTTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACAGAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGTTAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAGTTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACATGTGCTTTATGTC AAGA GCCATTTGAAGATTTCTACAGTGATGAAA CTGAAGAGTGGA TGTACAAAGGTGCAGTTT ATATGAATGCACCAGATGGAAATA TTGGTGGTCTAGAAAGGTCGCAGTTGGGACCTATTGTCCATGCTAAATGT CTAT CTGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTCCCACCATCTCACATGCAGGGTGCTGCTTTTCCATTATTATAGTATATTTG ] [+] EMBL BP184588 [ CAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACAGAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGTTAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAGTTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACATGTGCTTTATGTC AAGA GCCATTTGAAGATTTCTACAGTGATGAAA CTGAAGAGTGGA TGTACAAAGGTGCAGTTT ATATGAATGCACCAGATGGAAATA TTGGTGGTCTAGAAAGGTCGCAGTTGGGACCTATTGTCCATGCTAAATGT CTAT CTGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTCCCACCATCTCACATGCAGTGTGCTGCTTTTCCATTATTATAGTATAaaaa ] [+] EMBL AU083565 [ TGTGCTTTATGTCAAAGAGGCCATTTGAAGATTTCTACAGTGATGAAACCTGAAGATTGGATTGTACAAAGGTGCAGTTTAATATGAATGCACCAGATGGAAATATTTGGTGGTCTAGAAAGGTCGCAGTT GGACCTATTGTCCATGCTAAATGTCCTAT CTGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTCCCACCATCTCAaaa ] [+] EMBL CB630488 [ CTATCCCGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTCCCACCATCTCACATGCAGTGTGCTGCTTTTCCATTATTATAGTATATTTTGAAATCCCCATGTCTACTAGGTGATAGGCAGCCCTAGTTCAGAACGGTGCAATCACTCCACTGAACTTGCGAAACAATATCTTTCTTTCTTGTTTCCCTTCTTTCCTTTTGTGCAGGACAATATCAGTCGGCTACCTGGCTGGTAACTTCCAAAATCGAAAGGACATGTAAGGCGATCAAGGATGGAAGCAAAATCATCAGCTTAATTTCCAGAAAATGAAGGAGATGCTCTCTTCTTGAATTTTCCCCCTTTTTTCATACTCTTTTGTATGGCATGGCGTTCTGGTATTAACACAACAGTTCATTTTGGTCGCATGTATGACTCATCTTGCTGGATATGTTTGCACATGTCAAGTTCAGACTAGATTGTTTTAAAGTATGCT] consensusID : consensus_13257#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence [AGACGCAAAAGGAAGAGTAAGATTGCTGTTCCTGCTGATGAGGCCACAACATTGTGCTTTATGTCCAGACCCTGTTGAAGATTTCTACAGTGGATGGAACTGAAGAGTGGATGGTACACAAGGTGCAGTTTATATGAATGCCACAGATGGAAATATTTGGTGTCTAGAAAGGTCGCCAGTTGGGACCTAATTGGTCCATAGCTAAAGAGTCTATCTGGGCCCAACCATACTTATGGCCGGCCTATCTGCTGGTGACTCTGCCCTCATGTTGTTTCGTGCCTGGGGCTGTAGACCAGACATGGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCCATTGACAACCACTGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACCACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCCTTTTTGCTCGACAGTCACTATGGTGCATG] [+] EMBL BI807749 [AGACGCAAAAGGAAGAGTAAGATTGCTGTTCCTGCTGATGAGGCCACAACATTGTGCTTTATGTCCAGACCCTGTTGAAGATTTCTACAGTGGATGGAACTGAAGAGTGGATGGTACACAAGGTGCAGTTTATATGAATGCCACAGATGGAAATATTTGGTGTCTAGAAAGGTCGCCAGTTGGGACCTAATTGGTCCATAGCTAAAGAGTCTATCTGGGCCCAACCATACTTATGGCCGGCCTATCTGCTGGTGACTCTGCCCTCATGTTGTTTCGTGCCTGGGGCTGTAGACCAGACATGGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCCATTGACAACCACTGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACCACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCCTTTTTGCTCGACAGTCACTATGGTGCATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13257#0 CTTTCGCCTCCGCGACGCATATGCCTCCGCCTCCGCCTCGTCGCGGCGCCCCCAAACCCT 60 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 AGCCCGGCGCGGCGAGTCCCCCATCGGCGGCGGGAGCGGCGGGAGTAGGCGGGAAGGCGG 120 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 GATCTCCTCCGTCCCACATGGCGGCGGCGGCGGCGGTTGCGGGGGCGGGCGGGGTGGGGC 180 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 ACGTGGTGGAGAGGTTCAGGGCGAGGCTGCGGGAGGAGCAGGAGGAGGAGGAGGGGGGAG 240 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 GCGGGGAGGTGGCGGCGGCGGCGGTGGTGCGGGTGTACGTGGAGGTGCTCTCGGAGCTCA 300 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 CGTTCAACTGCAAGCCCATCATCACCGAGCTCACCATCATCGCCGGGCAGCACGCGGCCC 360 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TCGCCGCGAGGGGGATCGCCGACGCCATCTGCGCCCGCATCGCGGAGGTGTCTGCCGACC 420 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 AGAAATTACCATCTTTGTATCTGCTAGACAGTATTGTGAAGAACATAGGACGAGAATATG 480 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TAGGGCATTTTGCCGCTAGGTTGCAGAAGGTATTTTGTGATGCCTATAGGAAAGTTCACC 540 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 GCAATCAGCATGCTGCAATGCGACACCTCTTTGGTACCTGGTCACAAGTGTTCCCTTCCT 600 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 CTGTGCTACGCGGAATTGAGGATGAGCTTCAGTTTTCCCCCTTAGAGAATAAGCGCTCTG 660 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 CCACAGCGACTGATATCCGACAGTCAGAGTCGATATCTCCTAGACTGTCTCATGCCATTC 720 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 ATGTAAATCCAAAATATTTAGAAGCACAACAACAATTTAAGCAGTCAACTTCGGTGCATC 780 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 AACCAATAACTCGTGGAAATCGGCAAATGAATGATGTGGAAGAGGATCAAATAAATGGTT 840 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TAACATCTAAAAGTTCGCGAGGATGGCCTGCAACTAATTCAAAGCTCCAGAAGTCTACTA 900 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TGCTGTATGCTGACGATCTTGATCAACAAGAGGCATTTTGTTCACATACTGGGTTGATAA 960 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 GGCCAAGTTCGCCACATCTTTTAAGCAAACATCCTTCCATACTCAATACAGAAGGACCAT 1020 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TAGCCAATTCAAGAAGAACCATGTCAAGATCACCACCTCTTGATGTGCTCCCTAGAAATG 1080 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 CATCCCCCAAGAGAGCTCTGGAGAGGCCACCACTATCGCATTCTGTTCTAGGACCTGACC 1140 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 CCAGAAGATTGCCTGATCGAAATGGTTGGTTTGAACGGAAGTGGGCTTTTGAGGATGGTG 1200 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 CACAACGGCCTTCGATGAGCATACTTGATGAAGAATATAGAAAGCAAAGTGCAAGGGAAC 1260 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TTATTGATGCTTATGGAAATTCTCAAGGAAAAGATGTCGATGAAAGGCTTCCCAAGATGC 1320 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 AACGTCTAGATTCAAATGGCATGGCAGGCAGACCTAGTGCACAAAAATGGCTAACTTCGG 1380 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 AGGAAGAAGAGTATACTTGGGAAGATATGAGTCCTACTTTAACTGATCGAAACAGAACCA 1440 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 GCGTGCCCTCTTTACCTCCCCTTGGAACCCTGAGAGCTGGATTTCTTGGGCCAAACAGTG 1500 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 GACTACTGGAATCTGATATTGTGAGGCACAGTTGGCCAGGCCAGGCTCCTCGACCAGCAA 1560 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TTGATGGGCCACCACTAAATCTCGAAGATAGAATTCCTACTAACGGGCCCGTTGACAGAA 1620 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 CTAATAACAGGAGATATCCAGGCAATTTTGGTGTTCAGAATGGTGCCTTTTTAGATTACC 1680 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 AGAGTTCTGAACATACTCTTGATCCTGGGAGAACTACCATGCCAGTTCCACCTTGGCAGC 1740 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 AGACTATTGGTCAGCCGTTGCGGGTACAAGCGCCCCAGCCTGCATCAATTCTGAATAGAA 1800 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TGCCACTGCCTACTGATAGTGAAGTGCCAGTCAAGAGGTTGGCCACTGGTGGTACATATG 1860 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 ATGCGCTGAATGTAGATATTCCATTGTTGGAGAAGCAAAGGTCCTCACCTGCTCATGCTC 1920 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 CAATGGAATGGCCTCTTAATACACAGTCACTAACTATACAACCAATTCCACCTGATACCA 1980 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 AACATCCTAGAGGCGCATCAGATGGTCTAGATTCTAGACCATTTATTAGCCAAGGGTCCA 2040 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 GTTCGTCTGTTTTTGTTCCACAGCATCATGCCTTGGATCGGAGAACAATGAATGCTGATG 2100 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 ATTTAGCTCAACCATCATATCAGCATCCAGATTTGTTGTCATTGAGTCAACAAAATCAGG 2160 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 GCACAGTTTTGGGAAACCAAGGTCAACCTCATCACCCGCCGCAATTTCATCCCCATCCTC 2220 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 ATTCTCACCTTCAAGAGACAATTAGAAGCTTTGCCCCCAGTATGTCTGTTGCACCTCCAC 2280 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 AAAATATATTCCATGGACAAGGAGGTAGCGCAGCTGCACTCCTGCCAAGTTCTTTCCCTG 2340 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TACCACCTGCAGTACCACCCTATGGCTTGCAGTCTATGCCTGGATTTCCTTTGCCATCGT 2400 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TACCTTCAGGACCACCTCCTCCATCGCAGATAGGTCCATCATCATCGCAAGTTGGGGGCC 2460 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 CTCCACTTGTCTCTGGATTGTTAAGTAACCTTATGCAGCATGGTATAATCTCATTGCAAC 2520 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 CACCCAGCCAACCTCAGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGA 2580 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 ACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCC 2640 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACA 2700 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 GAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGT 2760 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAG 2820 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACAT 2880 consensus_13257#1 ----AGACGCAAAAGGAAGAGTAAGATTG-CTGTTCCTGCTGATGAGGCCACAACAT--T 53 ********* * * * **** ****************** * **** * consensus_13257#0 GTGCTTTATGTCAAGAGCCATTTGAAGATTTCTACAGTG-ATGAAACTGAAGAGTGGATG 2939 consensus_13257#1 GTGCTTTATGTCCAGACCCTGTTGAAGATTTCTACAGTGGATGGAACTGAAGAGTGGATG 113 ************ *** ** ****************** *** **************** consensus_13257#0 -TACA-AAGGTGCAGTTTATATGAATGCACCAGATGGAAATATTGGTGGTCTAGAAAGGT 2997 consensus_13257#1 GTACACAAGGTGCAGTTTATATGAATGCCACAGATGGAAATATTTGGTGTCTAGAAAGGT 173 **** ********************** ************** * ************ consensus_13257#0 CGC-AGTTGGGACCTATT--GTCCAT-GCTAAAT-GTCTATCTGGGCCAAACAATACTTA 3052 consensus_13257#1 CGCCAGTTGGGACCTAATTGGTCCATAGCTAAAGAGTCTATCTGGGCCCAACCATACTTA 233 *** ************ * ****** ****** ************* *** ******* consensus_13257#0 -GGCCGGCCTAGCTGCTGGT-ACTCTTGCCTCAT-TTGTTTCGTGGCTGGGGCTGTAGAC 3109 consensus_13257#1 TGGCCGGCCTATCTGCTGGTGACTCTGCCCTCATGTTGTTTCGTGCCTGGGGCTGTAGAC 293 ********** ******** ***** ****** ********** ************** consensus_13257#0 AAGACATG-TAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAAT 3168 consensus_13257#1 CAGACATGGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCCAT 353 ******* ************************************************ ** consensus_13257#0 TGACAACCA-TGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGC 3227 consensus_13257#1 TGACAACCACTGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACCACTGTAAAATGC 413 ********* ************************************* ************ consensus_13257#0 CTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGT 3287 consensus_13257#1 CTTTTGTAATATAGTGATTGAGCATGAGCCTTTTTGCTCGACAGTCACTATGGTGCATG- 472 ***************************** ***************************** consensus_13257#0 TCAATCGTTTGGTCCCACCATCTCACATGCAGTGTGCTGCTTTTCCATTATTATAGTATA 3347 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TTTGGAAATCCCCATGTCTACTAGGTGATAGGCAGCCCTAGTTCAGAACGGTGCAATCAC 3407 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TCCACTGAACTTGCGAAACAATATCTTTCTTTCTTGTTTCCCTTCTTTCCTTTTGTGCAG 3467 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 GACAATATCAGTCGGCTACCTGGCTGGTAACTTCCAAAATCGAAAGGACATGTAAGGCGA 3527 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TCAAGGATGGAAGCAAAATCATCAGCTTAATTTCCAGAAAATGAAGGAGATGCTCTCTTC 3587 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TTGAATTTTCCCCCTTTTTTCATACTCTTTTGTATGGCATGGCGTTCTGGTATTAACACA 3647 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 ACAGTTCATTTTGGTCGCATGTATGACTCATCTTGCTGGATATGTTTGCACATGTCAAGT 3707 consensus_13257#1 ------------------------------------------------------------ consensus_13257#0 TCAGACTAGATTGTTTTAAAGTATGCT 3734 consensus_13257#1 --------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||