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Oryza sativa
cluster # 13273 cluster # 13273       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13273#0 length = 1109 sequences # 5  
consensus_13273#1 length = 731 sequences # 5  
consensus_13273#2 length = 675 sequences # 2  

consensusID : consensus_13273#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1109
fasta sequence
                              [TTTTTTTGAAAGAAGTCAAAACGTTTTATA-ACATGAAACATGATACAGCATATATCACGATATTATACATATGG-TGTAAT-GTATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTC-TGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATGGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAAC-TGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAG-CTGCCGGCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGATCCCAGCCTCGAC-GGCG-ACGCCTCG-TTGCAGTCGGCGAAGTACTT-GCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGTTGATTATATATAGCATGAGCAAGACAGGATCAGAATTTAAGAAGAAACCAGGGTTGGAATTTCGGACTGTCCGATACGATATTATTTCGACCAAAATTTTTTATTTTCTTAATATTTTCATAAATTTTGGTAATATTTATTTAAATTCAACTAAAATTTGTTTAAAATTTTGGAAATTTCAGTATTTCGATGATGTCCAATCAAATTGGCTAAACCGAATGGTTTAACCCTGGAAGAAACATGGATCATCGAAGATTCAATTCAAAGCACCATTTTCAGTAAATTCTTGCCTACGAAATCCACTGATGAAACTGACCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATCTGCAGTTAAAATCATTTCTTGGGTAAATTTCTTACTTGGATGCTGGTAAATTTGTTGAAAAAATTGAAGAGGGATGAGAAGAATTACTGGTGACAAGGCCGTCGCGTTCTCGGATGAGCCGGGTCCTGACGATTTCAAGGGGGACG]

[-] EMBL BI812503             [TTTTTTTGAAAGAAGTCAAAACGTTTTATA ACATGAAACATGATACAGCATATATCACGATATTATACATATGG TGTAAT GTATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTC TGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATGGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAAC TGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAG CTGCCGGCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGG CTCGTCGGCGTTGGATCCCAG CTCGACAGGCGAACGCCTCGTTTGCAG CGGCGAAGTACTTGGCGGGACACTCCGGCa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BM419024             [  TTTTTGAAAGAAGTCAAAACGTTTNATANGCATGAAACATGATACAGCATATATCACGATATTATACATATGG TGTAAT GTATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTCGTGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTC TTGAA TTGTCGGGCGTCGGCGATCAAAAT GGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACGTGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCA TGGAGCTCTGAACCTGGAGCCTGAAGACTGCCGG ATGAACACTCTCCTCCTTCTCCTCCG AGCGA CTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGAG TGGATCCCAG CTCGAgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB672229             [                                                            anATTATACATATGGCCCTTATAGGATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTC TGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAAC TGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAG CTGCCGGCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGATCCCAGCCTCGAC GGCG ACGCCTCG TTGCAGTCGGCGAAGTACTT GCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGTTGATTATATATAGCATGAGCAAGACAGGATCAGAATTTAAGAAGAAACCAGGGTTGGAATTTCGGACTGTCCGATACGATATTATTTCGACCAAAATTTTTTATTTTCTTAATATTTTCATAAATTTTGGTAATATTTATTTAAATTCAACTAAAATTTGTTTAAAATTTTGGAAATTTCAGTATTTCGATGATGTCCAATCAAATT                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BM038790             [                                                                     tttgGG GGTAAT GTATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGGGTTTTTACTCTCTGTAATTACTCCTC NGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTC TTGAATTTGTCGGGCGTCGGCGATCAAAATGGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAAC TGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAG CTGCCGGCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGATCCCAGCCTCGAC GGCG ACGCCTCG TTGCAGTCGGCGAAGTACTT GCCGGACACTCCGG CACCGCCGGGTGCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB672228             [                                                                                                                                                                                                                                                                                                                                                                                                               CTGGAGCCTGAAG CTGCCGGCATGAACACTCTCCTCTTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGATCCCAGCCTCGAC GGCG ACGCCTCG TTGCAGTCGGCGAAGTACTT GCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGTTGATTATATATAGCATGAGCAAGACAGGATCAGAATTTAAGAAGAAACCAGGGTTGGAATTTCGGACTGTCCGATACGATATTATTTCGACCAAAATTTTTTATTTTCTTAATATTTTCATAAATTTTGGTAATATTTATTTAAATTCAACTAAAATTTGTTTAAAATTTTGGAAATTTCAGTATTTCGATGATGTCCAATCAAATTGGCTAAACCGAATGGTTTAACCCTGGAAGAAACATGGATCATCGAAGATTCAATTCAAAGCACCATTTTCAGTAAATTCTTGCCTACGAAATCCACTGATGAAACTGACCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATCTGCAGTTAAAATCATTTCTTGGGTAAATTTCTTACTTGGATGCTGGTAAATTTGTTGAAAAAATTGAAGAGGGATGAGAAGAATTACTGGTGACAAGGCCGTCGCGTTCTCGGATGAGCCGGGTCCTGACGATTTCAAGGGGGACG]


>consensus_13273#0 TTTTTTTGAAAGAAGTCAAAACGTTTTATAACATGAAACATGATACAGCATATATCACGA TATTATACATATGGTGTAATGTATGTATATATTTACATCTAGCATATTCTTATACATATC TAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGT GTTTTTACTCTCTGTAATTACTCCTCTGGTTTCTGAAACTGACAATCTAACTTGAATTTT CTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATGGGAT TAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGCTAGGCGA AAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCGGCATGAA CACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCT CGTCGGCGTTGGATCCCAGCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAGTACTTGC CGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGTT GATTATATATAGCATGAGCAAGACAGGATCAGAATTTAAGAAGAAACCAGGGTTGGAATT TCGGACTGTCCGATACGATATTATTTCGACCAAAATTTTTTATTTTCTTAATATTTTCAT AAATTTTGGTAATATTTATTTAAATTCAACTAAAATTTGTTTAAAATTTTGGAAATTTCA GTATTTCGATGATGTCCAATCAAATTGGCTAAACCGAATGGTTTAACCCTGGAAGAAACA TGGATCATCGAAGATTCAATTCAAAGCACCATTTTCAGTAAATTCTTGCCTACGAAATCC ACTGATGAAACTGACCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGT ATCTGCAGTTAAAATCATTTCTTGGGTAAATTTCTTACTTGGATGCTGGTAAATTTGTTG AAAAAATTGAAGAGGGATGAGAAGAATTACTGGTGACAAGGCCGTCGCGTTCTCGGATGA GCCGGGTCCTGACGATTTCAAGGGGGACG



consensusID : consensus_13273#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 731
fasta sequence
                              [CCTTTTTTTTTTTGAAAGAAGTCAAAACGTTTTATAACATGAAACATGATACAGCATATATCACGATATTATACATATGGTGTAATTGTATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTC-TGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCGGCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGAT--CCCA-GCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAGTACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATTGGTGACAAGGCCGTCGCGTTCTCGGATGAGCCGGGTCCTGACGATACCAGGGTGGACGCAGTTTGCCGTCACGTTGGCTTT]

[+] EMBL CB646178             [CCTTTTTTTTTTTGAAAGAAGTCAAAACGTTTTATAACATGAAACATGATACAGCATATATCACGATATTATACATATGGTGTAATTGTATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTC TGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCGGCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGAT  CCCA GCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAGTACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATTGGTGACAAGGCCGTCGCGTTCTCGGATGAGCCGGGTCCTGACGATACCAGGGTGGACGCAGTTTGCCGTCACGTTGGCTTT]
[-] EMBL BI812446             [      TTTTTTTGAAAGAAGTCAAAACGTTTTATAACATGAAACATGATACAGCATATATCACGATATTATACATATGGTGTAATTGTATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTCGTGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAA TGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTG CGGCATGAACACTCTCCTCCTTCTCCTCCG AG GACCTCGTCGGAGAATCTCCACAG TTGG GGGCTCGTCGG GTTGGATCCCCCAGGCCTCGACGGCGAC                                                                                                                                                                                                                    ]
[-] EMBL BM293897             [             tAAAGAAGTCAAAACGTTTTATAACATGAAACATGATGCAGCATATATCATGATATTATACATATGGTGTAATTGTATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATACTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCGC TGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB672663             [                       AAAACGTTTTATAACATGAAACCTTATACAGCATATATCACGATATTATACATATGGTGTAATTGTATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTC TGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCGGCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGAT  CCCA GCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAGTACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATTGGTGACAAGGCCGTCGCGTTCTCGGATGAGCCGGGTCCTGACGATACCAGGGTGGACGCAGTTTGCCGTCACGTTGGCTTT]
[+] EMBL CB620495             [                                                               tGATATTATACCCATGGTGTAATTGTATGTATATAATTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACCTCCAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCCCTGTAATTACTCCTC TGGTTTCCGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCCATCAAAATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCGGCATGAACGCTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGAT  CCCA GCCTCGACGGCGACGCCTCCTTGCAGTCGGCGAAGTACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCCCCGCCGCCTGAGGGATCGTCTTGAGCAGCTTGGACCCCAGGAAGAAGACT                                                                                      ]


>consensus_13273#1 CCTTTTTTTTTTTGAAAGAAGTCAAAACGTTTTATAACATGAAACATGATACAGCATATA TCACGATATTATACATATGGTGTAATTGTATGTATATATTTACATCTAGCATATTCTTAT ACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATA CTCTAGTGTTTTTACTCTCTGTAATTACTCCTCTGGTTTCTGAAACTGACAATCTAACTT GAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAA ATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGC TAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCG GCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTG GCGGCCTCGTCGGCGTTGGATCCCAGCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAG TACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCC GCCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATTGGTGACAAGG CCGTCGCGTTCTCGGATGAGCCGGGTCCTGACGATACCAGGGTGGACGCAGTTTGCCGTC ACGTTGGCTTT



consensusID : consensus_13273#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 675
fasta sequence
                              [CAAAACGTTTTATAACATGAAACATGATACAGCATATATCACGATATTATACATATGGGGTAATTGGATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTCTGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCGGCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGATCCCAGCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAGTACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATCTGCCTCGTGCCGAATTCGGCACGAGGGCCATTCCTCCGATCCCCACC]

[+] EMBL CB662909             [CAAAACGTTTTATAACATGAAACATGATACAGCATATATCACGATATTATACATATGGGGTAATTGGATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTCTGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCGGCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGATCCCAGCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAGTACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATCTGCCTCGTGCCGAATTCGGCACGAGGGCCATTCCTCCGATCCCCACC]
[+] EMBL CB663050             [CAAAACGTTTTATAACATGAAACATGATACAGCATATATCACGATATTATACATATGGGGTAATTGTATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGTAATTACTCCTCTGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCGGCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGATCCCAGCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAGTACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATCTGCCTCGTGCCGAATTCGGCACGAGGGCCATTCCTCCGATCCCCAC ]


>consensus_13273#2 CAAAACGTTTTATAACATGAAACATGATACAGCATATATCACGATATTATACATATGGGG TAATTGGATGTATATATTTACATCTAGCATATTCTTATACATATCTAACATATTATCTTA CATCTAAACTCAGATTACAGTATACATATACCATTATACTCTAGTGTTTTTACTCTCTGT AATTACTCCTCTGGTTTCTGAAACTGACAATCTAACTTGAATTTTCTTCCAGGCTCTGTG ATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAAATTGGATTAATTTTTTTTCTTC TTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGCTAGGCGAAAGCCAAGCCACGGT CTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCGGCATGAACACTCTCCTCCTTCT CCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTGGCGGCCTCGTCGGCGTTGGATC CCAGCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAGTACTTGCCGGACACTCCGGCCA CCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCCGCCTGAGGGATCGTCTTGAGCA GCTTGGACGCCAGGAAGAAGACTGTATCTGCCTCGTGCCGAATTCGGCACGAGGGCCATT CCTCCGATCCCCACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13273#1      CCTTTTTTTTTTTGAAAGAAGTCAAAACGTTTTATAACATGAAACATGATACAGCATATA 60
consensus_13273#2      ----------------------CAAAACGTTTTATAACATGAAACATGATACAGCATATA 38
consensus_13273#0      ------TTTTTTTGAAAGAAGTCAAAACGTTTTATAACATGAAACATGATACAGCATATA 54
                                             **************************************

consensus_13273#1      TCACGATATTATACATATGGTGTAATTGTATGTATATATTTACATCTAGCATATTCTTAT 120
consensus_13273#2      TCACGATATTATACATATGGGGTAATTGGATGTATATATTTACATCTAGCATATTCTTAT 98
consensus_13273#0      TCACGATATTATACATATGGTGTAAT-GTATGTATATATTTACATCTAGCATATTCTTAT 113
                       ******************** ***** * *******************************

consensus_13273#1      ACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATA 180
consensus_13273#2      ACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATA 158
consensus_13273#0      ACATATCTAACATATTATCTTACATCTAAACTCAGATTACAGTATACATATACCATTATA 173
                       ************************************************************

consensus_13273#1      CTCTAGTGTTTTTACTCTCTGTAATTACTCCTCTGGTTTCTGAAACTGACAATCTAACTT 240
consensus_13273#2      CTCTAGTGTTTTTACTCTCTGTAATTACTCCTCTGGTTTCTGAAACTGACAATCTAACTT 218
consensus_13273#0      CTCTAGTGTTTTTACTCTCTGTAATTACTCCTCTGGTTTCTGAAACTGACAATCTAACTT 233
                       ************************************************************

consensus_13273#1      GAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAA 300
consensus_13273#2      GAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAA 278
consensus_13273#0      GAATTTTCTTCCAGGCTCTGTGATGAATCTCTTTGAATTTGTCGGGCGTCGGCGATCAAA 293
                       ************************************************************

consensus_13273#1      ATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGC 360
consensus_13273#2      ATTGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGC 338
consensus_13273#0      ATGGGATTAATTTTTTTTCTTCTTCTGGTGATGATGAACTGAACTGATGATCTTGCTAGC 353
                       ** *********************************************************

consensus_13273#1      TAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCG 420
consensus_13273#2      TAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCG 398
consensus_13273#0      TAGGCGAAAGCCAAGCCACGGTCTGCATTGGAGCTCTGAACCTGGAGCCTGAAGCTGCCG 413
                       ************************************************************

consensus_13273#1      GCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTG 480
consensus_13273#2      GCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTG 458
consensus_13273#0      GCATGAACACTCTCCTCCTTCTCCTCCGCAGCGACCTCGTCGGAGAATCTCCACAGCTTG 473
                       ************************************************************

consensus_13273#1      GCGGCCTCGTCGGCGTTGGATCCCAGCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAG 540
consensus_13273#2      GCGGCCTCGTCGGCGTTGGATCCCAGCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAG 518
consensus_13273#0      GCGGCCTCGTCGGCGTTGGATCCCAGCCTCGACGGCGACGCCTCGTTGCAGTCGGCGAAG 533
                       ************************************************************

consensus_13273#1      TACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCC 600
consensus_13273#2      TACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCC 578
consensus_13273#0      TACTTGCCGGACACTCCGGCCACCGCCGGGTGCACCGCCACGTAGCACGTCGTCGCCGCC 593
                       ************************************************************

consensus_13273#1      GCCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATTGGTGACAAGG 660
consensus_13273#2      GCCTGAGGGATCGTCTTGAGCAGCTTGGACGCCAGGAAGAAGACTGTATCTGCCTCG--- 635
consensus_13273#0      GCCTGTTG-ATTATATATAGCA-TGAGCAAGACAGGATCAGAATTTAAGAAGAAACCAGG 651
                       *****  * **  * *  ****    * * * *****  *  * *  *   *   *    

consensus_13273#1      CCGTCGCGTTCTCGGATGAGCCGGGTCCTGACGATACCAGGGTGGACGCAGTTTGCCGTC 720
consensus_13273#2      -TGCCGAATTCG-GCACGAGGGCCATTCCTCCGATCCCCACC------------------ 675
consensus_13273#0      --GTTGGAATTTCGGACTGTCCGA-----TACGATATTATTTCGACCAAAATTTTTTATT 704
                         *  *   *   * *               ****                         

consensus_13273#1      ACGTTGGCTTT------------------------------------------------- 731
consensus_13273#2      ------------------------------------------------------------
consensus_13273#0      TTCTTAATATTTTCATAAATTTTGGTAATATTTATTTAAATTCAACTAAAATTTGTTTAA 764
                                                                                   

consensus_13273#1      ------------------------------------------------------------
consensus_13273#2      ------------------------------------------------------------
consensus_13273#0      AATTTTGGAAATTTCAGTATTTCGATGATGTCCAATCAAATTGGCTAAACCGAATGGTTT 824
                                                                                   

consensus_13273#1      ------------------------------------------------------------
consensus_13273#2      ------------------------------------------------------------
consensus_13273#0      AACCCTGGAAGAAACATGGATCATCGAAGATTCAATTCAAAGCACCATTTTCAGTAAATT 884
                                                                                   

consensus_13273#1      ------------------------------------------------------------
consensus_13273#2      ------------------------------------------------------------
consensus_13273#0      CTTGCCTACGAAATCCACTGATGAAACTGACCTGAGGGATCGTCTTGAGCAGCTTGGACG 944
                                                                                   

consensus_13273#1      ------------------------------------------------------------
consensus_13273#2      ------------------------------------------------------------
consensus_13273#0      CCAGGAAGAAGACTGTATCTGCAGTTAAAATCATTTCTTGGGTAAATTTCTTACTTGGAT 1004
                                                                                   

consensus_13273#1      ------------------------------------------------------------
consensus_13273#2      ------------------------------------------------------------
consensus_13273#0      GCTGGTAAATTTGTTGAAAAAATTGAAGAGGGATGAGAAGAATTACTGGTGACAAGGCCG 1064
                                                                                   

consensus_13273#1      ---------------------------------------------
consensus_13273#2      ---------------------------------------------
consensus_13273#0      TCGCGTTCTCGGATGAGCCGGGTCCTGACGATTTCAAGGGGGACG 1109
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)