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Oryza sativa
cluster # 13281 cluster # 13281       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13281#0 length = 1598 sequences # 11  
consensus_13281#1 length = 295 sequences # 1  

consensusID : consensus_13281#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1598
fasta sequence
                              [TGACTGGACTGAAGGAGTAGAAAAGGTCCTTCCTACATTGGGCACCTCGAGCGCGACTTACCCAAACCCGCCACCATTAATCTCCAGTGAAAAAGAGGGTAACTTCATATCATTAAAAGCTCGGATATCGCAGGAATTGGCGATCTTTTAGTTGAAGTCCTTCAGATT-----TCTTGGGACACCTGTAATGGCAGCTTACCAAACTGGCCCCGTGTCTGAGCCACCGATGCTGAACACTGAGATTATCACTCAAAAAGTCACCGGGTTTAATACTGAGACCACGACCAAAGAAAAGCCCATA-GGCTACCTTGAT-GTTTTTGTACACCAAGCACGCGATATTCACAACATATGCATCTACCACAAGCAGGATGTTTATGCAAAGCTGTGCCTCACGAGTGACCCAGATGTGTCATGCTCAACCAA-GGTGATCAACGGTGGTGGGCGCAACCCGGTATTTGACGATGGTCTAAGGCTCGATGTGCGCACTGTGGATGCTTCCCTTAAGTGTGAA-ATATGG-ATGTTGAGCAGGGTGAGAAACTACCTGGAAGACCAGCTTCTTGGCTTTGCCCTTGTTCCTCTGGCAGACATTGTAATGGCTGATGGAAAGCTT-GTCCAGGAATTCTCCATGACATCCACTGACCTGCTCCACACCCCTGCTGGATTTGTTCAGCTGTCCTTGTCTTATGTTGGATGTTCTCCAGATGTCATCCCCATTCCAGCACCCAACAAGTCAGCGTTAGTAGTTAACGGTTCTGGTAATGATAGCTCTGTCCCTTGCGAACTTGAAAAGATTGAATTCCCGGACTTGAATGTGGTGAATGAGAATCAAATTATGGTCTCCAAGTATTTCGAGATGGAGACCTTGAGCTATGAGGATTCAGTTAAGGTTGACAACCCAAAGTTAGTGCAATCTGATGCAGCTGTTCCTGGTACTGAATTATTTAACAAGAATCTCGATGAATATCGGGAGGGTAGTCCTCAAAGTTGTGTATCAACCACAGACTACTCCACAGCCACATCTGTCACTCCACATTCAGTTTCTGAGCCATCAGACA-CCATCCTTGCAGCATCTCCCACTGGAAGCCAGAGGGAGAAAAGCCAGGATGTTACCGATGGCGAGGCTGATTCTTCCGATGTACCACTCAAGGGTGAAGTTGTCAAG-CCTGTGATCAGCATTAATCTCAACCCTGGTGAGTCTGTTGTT-CAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGCAAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGACTCGATTACAGCTGAGAAGCCATC-CCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAGAGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATTAGTATACATGGTTCGTATTTGTCCGACTGGCTGTCATGTGTTTAATAGTTATATATATGCTTCCTAAGTTTCTGTTGCTACAATGAGTTTCTAGGACTCACTCTACACTTGTATTGCTTACAATGTCATGGTCAGTTAAAAATATAAGCATTTTGGAATAAAAAAAAATGAAAAAA]

[+] EMBL CF276627             [TGACTGGACTGAAGGAGTAGAAAAGGTCCTTCCTACATTGGGCACCTCGAGCGCGACTTACCCAAACCCGCCACCATTAATCTCCAGTGAAAAAGAGGGTAACTTCATATCATTAAAAGCTCGGATATCGCAGGAATTGGCGATCTTTTAGTTGAAGTCCTTCAGATT     TCTTGGGACACCTGTAATGGCAGCTTACCAAACTGGCCCCGTGTCTGAGCCACCGATGCTGAACACTGAGATTATCACTCAAAAAGTCACCGGGTTTAATACTGAGACCACGACCAAAGAAAAGCCCATAGGGCTACCTTGATGGTTTTTGTACACCAAGCACGCGATATTCACAACATATGCATCTACCACAAGCAGGATGTTTATGTAAAGCTGTGCCTCACGAGTGACCCAGATGTGTCATGCTCAACCAAGGGTGATCAACGGTGGTGGGCGCAACCCGGTATTTGACGATGGTCTAAGGCTCGATGTGCGCACTGTGGATGCTTCCCTTAAGTGTGAATAT TGGNATGTTGAGCAGGGTGAGAAACTACCTGGAAGACCAGCTTCTTGGCTTTGCCCTTGTTCCTCTGGCAGACATTGTAATGGCTGATGGAAAGCTTGGTCCA GAATTCTCCATGACATCCACTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF308510             [                  ctccAAGGTCCTTCCTACATTGGGCACCTCGAGCGCGACTTACCCAAACCCGCCACCATTAATCTCCAGTGAAAAAGAGGGTAACTTCATATCATTAAAAGCTCGGATATCGCAGGAATTGGCGATCTTTTAGTTGAAGTCCTTCATATT     TCTTGGGACACCTGTAATGGCAGCTTACCAAACTGGCCCCGTGTCTGAGCCACCGATGCTGAACACTGAGATTATCACTCAAAAAGTCACCGGGTTTAATACTGAGACCACGACCAAAGAAAAGCCCATA GGCTACCTTGAT GTTTTTGTACACCAAGCACGCGATATTCACAACATATGCATCTACCACAAGCAGGATGTTTATGCAAAGCTGTGCCTCACGAGTGACCCAGATGTGTCATGCTCAACCAA GGTGATCAACGGTGGTGGGCGCAACCCGGTATTTGACGATGGTCTAAGGCTCGATGTGCGCACTGTGGATGCTTCCCTTAAGTGTGGA ATATGG ATGTTGAGCAGGGTGAGAAACTACCTGGAAGACCAGCTTCTTGGCTTTGCCCTTGTTCCTCTGGCAGACATTGTAATGGCTGATGGAAAGCTT GTCCAGGAATTCTCCATGACATCCACTGACCTGCTCCACACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK073045             [                              TCCTACATTGGGCACCTCGAGCGCGACTTACCCAAACCCGCCACCATTAATCTCCAGTGAAAAAGAGGGTAACTTCATATCATTAAAAGCTCGGATATCGCAGGAATTGGCGATCTTTTAGTTGAAGTCCTTCAGATT     TCTTGGGACACCTGTAATGGCAGCTTACCAAACTGGCCCCGTGTCTGAGCCACCGATGCTGAACACTGAGATTATCACTCAAAAAGTCACCGGGTTTAATACTGAGACCACGACCAAAGAAAAGCCCATA GGCTACCTTGAT GTTTTTGTACACCAAGCACGCGATATTCACAACATATGCATCTACCACAAGCAGGATGTTTATGCAAAGCTGTGCCTCACGAGTGACCCAGATGTGTCATGCTCAACCAA GGTGATCAACGGTGGTGGGCGCAACCCGGTATTTGACGATGGTCTAAGGCTCGATGTGCGCACTGTGGATGCTTCCCTTAAGTGTGAA ATATGG ATGTTGAGCAGGGTGAGAAACTACCTGGAAGACCAGCTTCTTGGCTTTGCCCTTGTTCCTCTGGCAGACATTGTAATGGCTGATGGAAAGCTT GTCCAGGAATTCTCCATGACATCCACTGACCTGCTCCACACCCCTGCTGGATTTGTTCAGCTGTCCTTGTCTTATGTTGGATGTTCTCCAGATGTCATCCCCATTCCAGCACCCAACAAGTCAGCGTTAGTAGTTAACGGTTCTGGTAATGATAGCTCTGTCCCTTGCGAACTTGAAAAGATTGAATTCCCGGACTTGAATGTGGTGAATGAGAATCAAATTATGGTCTCCAAGTATTTCGAGATGGAGACCTTGAGCTATGAGGATTCAGTTAAGGTTGACAACCCAAAGTTAGTGCAATCTGATGCAGCTGTTCCTGGTACTGAATTATTTAACAAGAATCTCGATGAATATCGGGAGGGTAGTCCTCAAAGTTGTGTATCAACCACAGACTACTCCACAGCCACATCTGTCACTCCACATTCAGTTTCTGAGCCATCAGACA CCATCCTTGCAGCATCTCCCACTGGAAGCCAGAGGGAGAAAAGCCAGGATGTTACCGATGGCGAGGCTGATTCTTCCGATGTACCACTCAAGGGTGAAGTTGTCAAG CCTGTGATCAGCATTAATCTCAACCCTGGTGAGTCTGTTGTT CAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGCAAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGACTCGATTACAGCTGAGAAGCCATC CCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAGAGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATTAGTATACATGGTTCGTATTTGTCCGACTGGCTGTCATGTGTTTAATAGTTATATATATGCTTCCTAAGTTTCTGTTGCTACAATGAGTTTCTAGGACTCACTCTACACTTGTATTGCTTACAATGTCATGGTCAGTTAAAAATATA                              ]
[+] EMBL AU068099             [                                           ACCTCGAGCGCGACTTACCCAAACCCGCCACCATTAATCTCCAGTGAAAAAGAGGGTAACTTCATATCATTAAAAGCTCGGATATCGCAGGAATTGGCGATCTTTTAGTTGAAGTCCTTCAGATTTGCAGTCTTGGGACACCTGTAATGGCAGCTTACCAAACTGGCCCCGTGTCTGAGCCACCGATGCTGAACACTGAGATTATCACTCAAAAAGTCACCGGGTTTAATACTGAGACCACGACCAAAGAAAAGCCCATA GGCTACCTTGAT GTTTTTGTACACCAAGCACGCGATATTCACAACATATGCATCTACCACAAGCAGGATGTTTATGCAAAGCTGTGCCTCACGAGTGACCCAGATGTGTCATGCTCAACCAA G                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU066042             [                                                      GACTTACCCAAACCCGCCACCATTAATCTCCAGTGAAAAAGAGGGTAACTTCATATCATTAAAAGCTCGGATATCGCAGGAATTGGCGATCTTTTAGTTGAAGTCCTTCAGATT     TNTTGGGACACCTGTAATGGCAGCTTACCAAACTGGCCCCGTGTCTGAGCCACCGATGCTGAACACTGAGATTATCACTCAAAAAGTCACCGGGTTTAATACTGAGACCACGACCAAAGAAAAGCCCATA GGCTACCTTGAT GTTTTTGTACACCAAGCACGGGATATTCACAACATATGCATCTNCCACAAGCAGGATGTTTTTGCAAAGCTGTGCCTCACGNGTGACCCCGATGTGTCATGtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSR3212A             [                                                      GACTTACCCAAACCCGCCACCATTAATCTCCAGTGAAAAAGAGGGTAACTTCATATCATTAAAAGCTCGGATATCGCAGGAATTGGCGATCTTTTAGTTGAAGTCCTTCAGATT     TCTTGGGACACCTGTAATGGCAGCTTACCAAACTGGCCCCGTGTCTGAGCCACCGATGCTGAACACTGAGATTATCACTCAAAAAGTCACCGGGTTTAATACTGAGACCACGACCAAAGAAAAGCCCATA GGCTACCTTGAT GTTTTTGTACACCAAGCACGCGATATTCACAACATATGCATCTACCACAAGCAGGATGTTTATGCAAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU068100             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAAAGTTAGTGCAATCTGATGCAGCTGTTCCTGGTACTGAATTATTTAAC AGAATCTCGATGAATATCGGGAGGGAAGTCCTCAAAGTTGTGTATCAACCACAGACTACTCCACAGCCACATCTGTCACTCCACATTCAGTTTCTGAGCCATCAGACA CCATCCTTGCAGCATCTCCCACTGGAAGCCAGAGGGAGAAAAGCCAGGATGTTACCGATGGCGAGGCTGATTCTTCCGATGTACCACTCAAGGGTGAAGTTGTCAAG CCTGTGATCAGCATTAATCTCAACCCTGGTGAGTCTGTTGTT CAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGCAAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGACTCGATTACAGCTGAGAAGCCATC CCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAGAGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATTAGTATACATGGTTCGTATTTGTCCGACTGGCTGTCATGTGTTTAATAGTTATATATATGCTTCCTAAGTTTCTGTTGCTACAATGAGTTTCTAGGACTCACTCTACACTTGTATTGCTTACAATGTCATGGTCAGTTAAAAATATAAGCATTTTGGAATAAAAA            ]
[+] EMBL AU032021             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CATTCAGTTTCTGAGCCATCAGACACCCATCCTTGCAGCATCTCCCACTGGAAGCCAGAGGGAGAAAAGCCAGGATGTTACCGATGNCGAGGCTGATTCTTCCGATGTACCACTCAAGGGTNAAGTTGTCAAG CCTGTGATCAGCATTAATCTCAACCCTGGTGAGTCTGTTGTT CAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGCAAAGATGAAGCTGCCATTGGATNTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGACTCGATTACAGCTGAGAAGCCATC CCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAGAGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATTAGTATACATGGTTCGTATTTGTCCGACTGGCTGTCATGTGTTTAATAGTTATATATATGCTTCCTAAGTTTCTGTTGCTACAATGAGTTTCTAGGACTCACTCTACACTTGTATTGCTTACAATGTCATGGTCAGTTAAAAATATAAGCATTTTGGAAAAAAAAAAAA        ]
[-] EMBL CF276628             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGAAAAGCCAGGATGTTACCGATGGCGAGGCTGATTCTTCCGATGTACCACTCAAGGGTGAAGTTGTCAAG CCTGTGATCAGCATTAATCTCAACCCTGGTGAGTCTGTTGTT CAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGCAAAGATGAAGCTGCCATTCGATGTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGACTCGATTACAGCTGAGAAGCCATC CCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAGAGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATTAGTATACATGGTTCGTATTTGTCCGACTGGCTGTCATGTGTTTAATAGTTATATATATGCTTCCTAAGTTTCTGTTGCTACAATGAGTTTCTAGGACTCACTCTACACTTGTATTGCTTACAATGTCATGGTCAGTTAAAAATATAAGCATTTTGGAATAATTTCGCCTGAAAAAA]
[+] EMBL AU032955             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCAAGCCCTGTGATCAGCATTAANCTCAACCCTGGTGAGTCTGTTGTTCCAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAANCCCTTGCAAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGACTCGATTACAGCTGAGAAGCCATC CCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAGAGCCTTCTTCTAAGATGCTGATACTAAGTAGGANCGTGTATTAGTATACATGGTTCGTATTTGTCCGACTGGCTGTCATGTGTTTAATAGTTATATATATGCTTCCTAAGTTTCTGTTGCTACAATGAGTTTCTAGGACTCACTCTACACTTGTATTGCTTACAATGTCATGGTCAGTTAAAAATATAAGCATTTTGGAATAAAAAAAAA        ]
[-] EMBL CF308509             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTGTT CAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGCAAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCCCTCAACTGAAACCAACACTGACTCGATTACAGCTGAGAAGCCATCNCCCATCGAAGGGTCCTAGGGTCTTCTATGGAAGCAGAGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATTAGTATACATGGTTCGTATTTGTCCGACTGGCTGTCATGTGTTTAATAGTTATATATATGCTTCCTAAGTTTCTGTTGCTACAATGAGTTTCTAGGACTCACTCTACACTTGTATTGCTTACAATGTCATGGTCAGTTAAAAATATAAGCATTTTGGAATAAAAAAAAA        ]


>consensus_13281#0 TGACTGGACTGAAGGAGTAGAAAAGGTCCTTCCTACATTGGGCACCTCGAGCGCGACTTA CCCAAACCCGCCACCATTAATCTCCAGTGAAAAAGAGGGTAACTTCATATCATTAAAAGC TCGGATATCGCAGGAATTGGCGATCTTTTAGTTGAAGTCCTTCAGATTTCTTGGGACACC TGTAATGGCAGCTTACCAAACTGGCCCCGTGTCTGAGCCACCGATGCTGAACACTGAGAT TATCACTCAAAAAGTCACCGGGTTTAATACTGAGACCACGACCAAAGAAAAGCCCATAGG CTACCTTGATGTTTTTGTACACCAAGCACGCGATATTCACAACATATGCATCTACCACAA GCAGGATGTTTATGCAAAGCTGTGCCTCACGAGTGACCCAGATGTGTCATGCTCAACCAA GGTGATCAACGGTGGTGGGCGCAACCCGGTATTTGACGATGGTCTAAGGCTCGATGTGCG CACTGTGGATGCTTCCCTTAAGTGTGAAATATGGATGTTGAGCAGGGTGAGAAACTACCT GGAAGACCAGCTTCTTGGCTTTGCCCTTGTTCCTCTGGCAGACATTGTAATGGCTGATGG AAAGCTTGTCCAGGAATTCTCCATGACATCCACTGACCTGCTCCACACCCCTGCTGGATT TGTTCAGCTGTCCTTGTCTTATGTTGGATGTTCTCCAGATGTCATCCCCATTCCAGCACC CAACAAGTCAGCGTTAGTAGTTAACGGTTCTGGTAATGATAGCTCTGTCCCTTGCGAACT TGAAAAGATTGAATTCCCGGACTTGAATGTGGTGAATGAGAATCAAATTATGGTCTCCAA GTATTTCGAGATGGAGACCTTGAGCTATGAGGATTCAGTTAAGGTTGACAACCCAAAGTT AGTGCAATCTGATGCAGCTGTTCCTGGTACTGAATTATTTAACAAGAATCTCGATGAATA TCGGGAGGGTAGTCCTCAAAGTTGTGTATCAACCACAGACTACTCCACAGCCACATCTGT CACTCCACATTCAGTTTCTGAGCCATCAGACACCATCCTTGCAGCATCTCCCACTGGAAG CCAGAGGGAGAAAAGCCAGGATGTTACCGATGGCGAGGCTGATTCTTCCGATGTACCACT CAAGGGTGAAGTTGTCAAGCCTGTGATCAGCATTAATCTCAACCCTGGTGAGTCTGTTGT TCAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGC AAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGA CTCGATTACAGCTGAGAAGCCATCCCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAG AGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATTAGTATACATGGTTCGTAT TTGTCCGACTGGCTGTCATGTGTTTAATAGTTATATATATGCTTCCTAAGTTTCTGTTGC TACAATGAGTTTCTAGGACTCACTCTACACTTGTATTGCTTACAATGTCATGGTCAGTTA AAAATATAAGCATTTTGGAATAAAAAAAAATGAAAAAA



consensusID : consensus_13281#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 295
fasta sequence
                              [CAACCCTGGTGAGTCTGTTGTTCAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGCAAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGACTCGATTACAGCTGAGAAGCCATCCCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAGAGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATTTGTCCGACTGGCTGNNATGTGTTTAATAGTTATATATATGCTTCCTAAGNNN]

[+] EMBL CF196013             [CAACCCTGGTGAGTCTGTTGTTCAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGCAAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGACTCGATTACAGCTGAGAAGCCATCCCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAGAGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATTTGTCCGACTGGCTGNNATGTGTTTAATAGTTATATATATGCTTCCTAAGNNN]


>consensus_13281#1 CAACCCTGGTGAGTCTGTTGTTCAGGAGGACATAGTTAACATGTACATGAAGAGCATGCA GCAGTTTACTGAATCCCTTGCAAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCC CTCAACTGAAAACAACACTGACTCGATTACAGCTGAGAAGCCATCCCCATCGAAGGGTTC TAGGGTCTTCTATGGAAGCAGAGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGT ATTTGTCCGACTGGCTGNNATGTGTTTAATAGTTATATATATGCTTCCTAAGNNN



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13281#0      TGACTGGACTGAAGGAGTAGAAAAGGTCCTTCCTACATTGGGCACCTCGAGCGCGACTTA 60
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      CCCAAACCCGCCACCATTAATCTCCAGTGAAAAAGAGGGTAACTTCATATCATTAAAAGC 120
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      TCGGATATCGCAGGAATTGGCGATCTTTTAGTTGAAGTCCTTCAGATTTCTTGGGACACC 180
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      TGTAATGGCAGCTTACCAAACTGGCCCCGTGTCTGAGCCACCGATGCTGAACACTGAGAT 240
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      TATCACTCAAAAAGTCACCGGGTTTAATACTGAGACCACGACCAAAGAAAAGCCCATAGG 300
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      CTACCTTGATGTTTTTGTACACCAAGCACGCGATATTCACAACATATGCATCTACCACAA 360
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      GCAGGATGTTTATGCAAAGCTGTGCCTCACGAGTGACCCAGATGTGTCATGCTCAACCAA 420
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      GGTGATCAACGGTGGTGGGCGCAACCCGGTATTTGACGATGGTCTAAGGCTCGATGTGCG 480
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      CACTGTGGATGCTTCCCTTAAGTGTGAAATATGGATGTTGAGCAGGGTGAGAAACTACCT 540
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      GGAAGACCAGCTTCTTGGCTTTGCCCTTGTTCCTCTGGCAGACATTGTAATGGCTGATGG 600
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      AAAGCTTGTCCAGGAATTCTCCATGACATCCACTGACCTGCTCCACACCCCTGCTGGATT 660
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      TGTTCAGCTGTCCTTGTCTTATGTTGGATGTTCTCCAGATGTCATCCCCATTCCAGCACC 720
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      CAACAAGTCAGCGTTAGTAGTTAACGGTTCTGGTAATGATAGCTCTGTCCCTTGCGAACT 780
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      TGAAAAGATTGAATTCCCGGACTTGAATGTGGTGAATGAGAATCAAATTATGGTCTCCAA 840
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      GTATTTCGAGATGGAGACCTTGAGCTATGAGGATTCAGTTAAGGTTGACAACCCAAAGTT 900
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      AGTGCAATCTGATGCAGCTGTTCCTGGTACTGAATTATTTAACAAGAATCTCGATGAATA 960
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      TCGGGAGGGTAGTCCTCAAAGTTGTGTATCAACCACAGACTACTCCACAGCCACATCTGT 1020
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      CACTCCACATTCAGTTTCTGAGCCATCAGACACCATCCTTGCAGCATCTCCCACTGGAAG 1080
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      CCAGAGGGAGAAAAGCCAGGATGTTACCGATGGCGAGGCTGATTCTTCCGATGTACCACT 1140
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      CAAGGGTGAAGTTGTCAAGCCTGTGATCAGCATTAATCTCAACCCTGGTGAGTCTGTTGT 1200
consensus_13281#1      ---------------------------------------CAACCCTGGTGAGTCTGTTGT 21
                                                              *********************

consensus_13281#0      TCAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGC 1260
consensus_13281#1      TCAGGAGGACATAGTTAACATGTACATGAAGAGCATGCAGCAGTTTACTGAATCCCTTGC 81
                       ************************************************************

consensus_13281#0      AAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGA 1320
consensus_13281#1      AAAGATGAAGCTGCCATTGGATGTGGAGAACAGTAGCCCCTCAACTGAAAACAACACTGA 141
                       ************************************************************

consensus_13281#0      CTCGATTACAGCTGAGAAGCCATCCCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAG 1380
consensus_13281#1      CTCGATTACAGCTGAGAAGCCATCCCCATCGAAGGGTTCTAGGGTCTTCTATGGAAGCAG 201
                       ************************************************************

consensus_13281#0      AGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATTAGTATACATGGTTCGTAT 1440
consensus_13281#1      AGCCTTCTTCTAAGATGCTGATACTAAGTAGGATCGTGTATT------------------ 243
                       ******************************************                  

consensus_13281#0      TTGTCCGACTGGCTGTCATGTGTTTAATAGTTATATATATGCTTCCTAAGTTTCTGTTGC 1500
consensus_13281#1      -TGTCCGACTGGCTGNNATGTGTTTAATAGTTATATATATGCTTCCTAAGNNN------- 295
                        **************  *********************************          

consensus_13281#0      TACAATGAGTTTCTAGGACTCACTCTACACTTGTATTGCTTACAATGTCATGGTCAGTTA 1560
consensus_13281#1      ------------------------------------------------------------
                                                                                   

consensus_13281#0      AAAATATAAGCATTTTGGAATAAAAAAAAATGAAAAAA 1598
consensus_13281#1      --------------------------------------
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)