These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13291#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2197 fasta sequence [CTAACCCTAGCTAAACCCCCCTTCTCCCTTGCGCCTCCGCTTCGCGAGCCTCATCTCCTCGATCTCTTTCGATTCAGTGGAAAACCTAGGAGACCGGCGCGGCATGGCGGAGTCGGGCTCGTCGGGCCTGGAGGAGAAGCTGGCGGGTCTCTCCGCGGGCTGCGGCGAGGAGCCGCAGCAGCTCTCGAAGAATGCCAAGAAGAGGGAGGAGAAAAGGAAGAAGCAGGAGGAGGAGCGCCGGTTGAAGGAGGAAGAGAAGAAGAAGAAGGCCGCTGCAACAGCAGCTGCTAGTGGAGAGCCCCCGAAGGAATCTGCCGCCGACGATGAGGAAATGGATCCCACTCAATATTATGAGAATCGCCTCAAGGCACTTGATTCACTCAAGGCCACGGGTGTAAACCCCTATCCCCATAAGTTCCTGGCTAATATTACCGTAGCCGATTATATTGAGAAATACAAGAGCATGAATGTTGGGGATAAGCTTGTTGACGTCACCGAGTGCCTAGCAGGGAGGATCATGACCAAGAGAGCGCAATCTTCCAAGCTCTTATTTTATGATCTTTATGGTGGTGGTGAGAAAGTTCAAGTTTTTGCTGATGCCAGGACCTCAGAGTTGGAAGATAATGAATTCATTAAGTTTCACTCTACTCTGAAACGAGGTGATATTGTTGGTGTATGTGGTTATCCAGGAAAGAGCAAGAGAGGGGAGCTCAGTATATTCCCAAAGAAAATTGTTGTGCTCTCCCCATGCCTTCATATGATGCCTCGACAGAAGAGTGAGGGAAGTGCTGTTCCCACTCCATGGGCTCCAGGAATGGGTAGGAACATCGAAAAGTATGTTTTGAGGGACCAGGAAACCCGATATCGTCAACGATATCTTGATCTCATGGTAAACCATGAAGTGAGGCATATTTTCAAGACAAGATCAAAAGTTGTCTCTTTTATTCGGAAATTTCTTGATGGTCTTGACTTTTTAGAGGTGGAGACTCCAATGATGAACATGATTGCAGGTGGAGCAGCTGCAAGGCCTTTTGTCACACATCATAATGAGTTAAACATGAGGCTTTATATGCGTATTGCTCCTGAGCTCTATCTGAAGGAATTGGTTGTTGGGGGGCTGGATCGTGTTTATGAAATTGGGAAGCAGTTCAGGAATGAAGGAATTGACCTGACGCACAATCCTGAATTCACAACATGTGAATTTTATATGGCATATGCAGATTACAATGACTTGATAGAGCTTACTGAAACCATGTTATCTGGTATGGTTAAGGAGTTGACAGGTGGCTACAAGATTAAATATCATGCTAACGGAGTTGAGAAACCACCAATAGAGATTGATTCCACACCTCCCTTCAGAAAGATAGACGTGATTGAAGAATTAGAGGCTATGGCTAAACTCAATATACCTAAAGATCTCTCAAGTGATGAAGCAAACAAGTATTTGATAGATGCCTGTGCCAAATATGATGTCAAATGCCCACCTCCCCAGACTACAACACGGTTGCTTGATAAGCTAGTTGGCCATTTCTTGGAGGAGACATGTGTGAATCCCACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGGCAAAGTGGCATAGGTCTCGACCTGGATTGACTGAGAGGTTTGAGCTCTTTGTTAACAAGCATGAGGTGTGCAATGCATATACAGAGTTAAATGATCCTGTTGTTCAGAGGCAACGGTTTGAGGAACAACTAAAGGATCGTCAATCTGGTGATGATGAAGCTATGGCATTGGATGAAACATTCTGCACAGCCCTTGAGTATGGCCTACCACCGACTGGTGGTTGGGGATTGGGAATTGATCGCCTTACAATGTTGCTGACTGATTCTCAGAATATCAAGGAAGTTCTTCTATTCCCGGCTATGAAGCCTCAAGATTAGATATGTCCACAAAGCAGGAACCTGTCAGAAGGATTAAAGCAGACTGAATGCTGACTGAGAGGATTTCAATTGGCCCTCGAGATGGAGGATTTGAAGGAAACTTATAATTTTGTTTTAATTGTGCATGTGAGGTTTCCATGTCCTATTGTACTTTATTTTTGGAGAACATTGGTGGTCAGTTAAGCAAACAGTTAATCTCGCTGCAAAGATATCAAGCGTAACTTATAAGATGACTTAAGTTTGTGCAATTTCTGTGGCCTTACTTGAAAATGATAGCGCGTTATT] [+] EMBL AK099302 [CTAACCCTAGCTAAACCCCCCTTCTCCCTTGCGCCTCCGCTTCGCGAGCCTCATCTCCTCGATCTCTTTCGATTCAGTGGAAAACCTAGGAGACCGGCGCGGCATGGCGGAGTCGGGCTCGTCGGGCCTGGAGGAGAAGCTGGCGGGTCTCTCCGCGGGCTGCGGCGAGGAGCCGCAGCAGCTCTCGAAGAATGCCAAGAAGAGGGAGGAGAAAAGGAAGAAGCAGGAGGAGGAGCGCCGGTTGAAGGAGGAAGAGAAGAAGAAGAAGGCCGCTGCAACAGCAGCTGCTAGTGGAGAGCCCCCGAAGGAATCTGCCGCCGACGATGAGGAAATGGATCCCACTCAATATTATGAGAATCGCCTCAAGGCACTTGATTCACTCAAGGCCACGGGTGTAAACCCCTATCCCCATAAGTTCCTGGCTAATATTACCGTAGCCGATTATATTGAGAAATACAAGAGCATGAATGTTGGGGATAAGCTTGTTGACGTCACCGAGTGCCTAGCAGGGAGGATCATGACCAAGAGAGCGCAATCTTCCAAGCTCTTATTTTATGATCTTTATGGTGGTGGTGAGAAAGTTCAAGTTTTTGCTGATGCCAGGACCTCAGAGTTGGAAGATAATGAATTCATTAAGTTTCACTCTACTCTGAAACGAGGTGATATTGTTGGTGTATGTGGTTATCCAGGAAAGAGCAAGAGAGGGGAGCTCAGTATATTCCCAAAGAAAATTGTTGTGCTCTCCCCATGCCTTCATATGATGCCTCGACAGAAGAGTGAGGGAAGTGCTGTTCCCACTCCATGGGCTCCAGGAATGGGTAGGAACATCGAAAAGTATGTTTTGAGGGACCAGGAAACCCGATATCGTCAACGATATCTTGATCTCATGGTAAACCATGAAGTGAGGCATATTTTCAAGACAAGATCAAAAGTTGTCTCTTTTATTCGGAAATTTCTTGATGGTCTTGACTTTTTAGAGGTGGAGACTCCAATGATGAACATGATTGCAGGTGGAGCAGCTGCAAGGCCTTTTGTCACACATCATAATGAGTTAAACATGAGGCTTTATATGCGTATTGCTCCTGAGCTCTATCTGAAGGAATTGGTTGTTGGGGGGCTGGATCGTGTTTATGAAATTGGGAAGCAGTTCAGGAATGAAGGAATTGACCTGACGCACAATCCTGAATTCACAACATGTGAATTTTATATGGCATATGCAGATTACAATGACTTGATAGAGCTTACTGAAACCATGTTATCTGGTATGGTTAAGGAGTTGACAGGTGGCTACAAGATTAAATATCATGCTAACGGAGTTGAGAAACCACCAATAGAGATTGATTCCACACCTCCCTTCAGAAAGATAGACGTGATTGAAGAATTAGAGGCTATGGCTAAACTCAATATACCTAAAGATCTCT AAGTGATGAAGCAAACAAGTATTTGATAGATGCCTGTGCCAAATATGATGTCAAATGCCCACCTCCCCAGACTACAACACGGTTGCTTGATAAGCTAGTTGGCCATTTCTTGGAGGAGACATGTGTGAATCCCACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGGCAAAGTGGCATAGGTCTCGACCTGGATTGACTGAGAGGTTTGAGCTCTTTGTTAACAAGCATGAGGTGTGCAATGCATATACAGAGTTAAATGATCCTGTTGTTCAGAGGCAACGGTTTGAGGAACAACTAAAGGATCGTCAATCTGGTGATGATGAAGCTATGGCATTGGATGAAACATTCTGCACAGCCCTTGAGTATGGCCTACCACCGACTGGTGGTTGGGGATTGGGAATTGATCGCCTTACAATGTTGCTGACTGATTCTCAGAATATCAAGGAAGTTCTTCTATTCCCGGCTATGAAGCCTCAAGATTAGATATGTCCACAAAGCAGGAACCTGTCAGAAGGATTAAAGCAGACTGAATGCTGACTGAGAGGATTTCAATTGGCCCTCGAGATGGAGGATTTGAAGGAAACTTATAATTTTGTTTTAATTGTGCATGTGAGGTTTCCATGTCCTATTGTACTTTATTTTTGGAGAACATTGGTGGTCAGTTAAGCAAACAGTTAATCTCGCTGCAAAGATATCAAGCGTAACTTATAAGATGAC ] [+] EMBL AK063765 [ TAACCCTAGCTAAACCCCCCTTCTCCCTTGCGCCTCCGCTTCGCGAGCCTCATCTCCTCGATCTCTTTCGATTCAGTGGAAAACCTAGGAGACCGGCGCGGCATGGCGGAGTCGGGCTCGTCGGGCCTGGAGGAGAAGCTGGCGGGTCTCTCCGCGGGCTGCGGCGAGGAGCCGCAGCAGCTCTCGAAGAATGCCAAGAAGAGGGAGGAGAAAAGGAAGAAGCAGGAGGAGGAGCGCCGGTTGAAGGAGGAAGAGAAGAAGAAGAAGGCCGCTGCAACAGCAGCTGCTAGTGGAGAGCCCCCGAAGGAATCTGCCGCCGACGATGAGGAAATGGATCCCACTCAATATTATGAGAATCGCCTCAAGGCACTTGATTCACTCAAGGCCACGGGTGTAAACCCCTATCCCCATAAGTTCCTGGCTAATATTACCGTAGCCGATTATATTGAGAAATACAAGAGCATGAATGTTGGGGATAAGCTTGTTGACGTCACCGAGTGCCTAGCAGGGAGGATCATGACCAAGAGAGCGCAATCTTCCAAGCTCTTATTTTATGATCTTTATGGTGGTGGTGAGAAAGTTCAAGTTTTTGCTGATGCCAGGACCTCAGAGTTGGAAGATAATGAATTCATTAAGTTTCACTCTACTCTGAAACGAGGTGATATTGTTGGTGTATGTGGTTATCCAGGAAAGAGCAAGAGAGGGGAGCTCAGTATATTCCCAAAGAAAATTGTTGTGCTCTCCCCATGCCTTCATATGATGCCTCGACAGAAGAGTGAGGGAAGTGCTGTTCCCACTCCATGGGCTCCAGGAATGGGTAGGAACATCGAAAAGTATGTTTTGAGGGACCAGGAAACCCGATATCGTCAACGATATCTTGATCTCATGGTAAACCATGAAGTGAGGCATATTTTCAAGACAAGATCAAAAGTTGTCTCTTTTATTCGGAAATTTCTTGATGGTCTTGACTTTTTAGAGGTGGAGACTCCAATGATGAACACGATTGCAGGTGGAGCAGCTGCAAGGCCTTTTGTCACACATCATAATGAGTTAAACATGAGGCTTTATATGCGTATTGCTCCTGAGCTCTATCTGAAGGAATTGGTTGTTGGGGGGCTGGATCGTGTTTATGAAATTGGGAAGCAGTTCAGGAATGAAGGAATTGACCTGACGCACAATCCTGAATTCACAACATGTGAATTTTATATGGCATATGCAGATTACAATGACTTGATAGAGCTTACTGAAACCATGTTATCTGGTATGGTTAAGGAGTTGACAGGTGGCTACAAGATTAAATATCATGCTAACGGAGTTGAGAAACCACCAATAGAGATTGATTTCACACCTCCCTTCAGAAAGATAGACATGATTGAAGAATTAGAGGCTATGGCTAAACTCAATATACCTAAAGATCTCTCAAGTGATGAAGCAAACAAGTATTTGATAGATGCCTGTGCCAAATATGATGTCAGATGCCCACCTCCCCAGACTACAACACGGTTGCTTGATAAGCTAGTTGGCCATTTCTTGGAGGAGACATGTGTGAATCCCACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGGCAAAGTGGCATAGGTCTCGACCTGGATTGACTGAGAGGTTTGAGCTCTTTGTTAACAAGCATGAGGTGTGCAATGCATATACAGAGTTAAATGATCCTGTTGTTCAGAGGCAACGGTTTGAGGAACAACTAAAGGATCGTCAATCTGGTGATGATGAAGCTATGGCATTGGATGAAACATTCTGCACAGCCCTTGAGTATGGCCTACCACCGACTGGTGGTTGGGGATTGGGAATTGATCGCCTTACAATGTTGCTGACTGATTCTCAGAATATCAAGGAAGTTCTTCTATTCCCGGCTATGAAGCCTCAAGATTAGATATGTCCACAAAGCAGGAACCTGTCAGAAGGATTAAAGCAGACTGAATGCTGACTGAGAGGATTTCAATTGGCCCTCGAGATGGAGGATTTGAAGGAAACTTATAATTTTGTTTTAATTGTGCATGTGAGGTTTCCATGTCCTATTGTACTTTATTTTTGGAGAACATTGGTGGTCAGTTAAGCAAACAGTTAATCTCGCTGCAAAGATATCAAGCGTAACTTATAAGATGACTTAAGTTTGTGCAATTTCTGTGGCCTTACTTGAAAATGATAGCGCGTTATT] [+] EMBL CB644605 [ ATCTCCCTCGATTCAGTGGAAAACCTAGGAGACCGGCGCGGCATGGCGGAGTCGGGCTCGTCGGGCCTGGAGGAGAAGCTGGCGGGTCTCTCCGCGGGCTGCGGCGAGGAGCCGCAGCAGCTCTCGAAGAATGCCAAGAAGAGGGAGGAGAAAAGGAAGAAGCAGGAGGAGGAGCGCCGGTTGAAGGAGGAAGAGAAGAAGAAGAAGGCCGCTGCAACAGCAGCTGCTAGTGGAGAGCCCCCGAAGGAATCTGCCGCCGACGATGAGGAAATGGATCCCACTCAATATTATGAGAATCGCCTCAAGGCACTTGATTCACTCAAGGCCACGGGTGTAAACCCCTATCCCCATAAGTTCCTGGCTAATATTACCGTAGCCGATTATATTGAGAAATACAAGAGCATGAATGTTGGGGATAAGCTTGTTGACGTCACCGAGTGCCTAGCAGGGAGGATCATGACCAAGAGAGCGCAATCTTCCAAGCTCTTATTTTATGATCTTTATGGTGGTGGTGAGAAAGTTCAAGTTTTTGCTGATGCCAGGACCTCAGAGTTGGAAGATAATGAATTCATTAAGTTTCACTCTACTCTGAAACGAGGTGATATTGTTGGTGTATGTGGTTATCCAGGAAAGAGCAAGAGAGGGGAGCTCAGTATATTCCCAAAGAAAATTGTTGTGCTCTCCCCATGCCTTCATATGATGCCTCGACAGAAGAGTGAGGGAAGTGCTGTTCCCACTCCATGGGCTCC ] [+] EMBL CB627677 [ GAGACCCGTGCGGCATGGCGGAGTCGGGCTCGTCGGGTCTGGAGGAGAAGCTGGCGGGTCTCTCCGCGGGCGGCGGCGAGGAGCCGCAGCAGCTCTCGAAGAATGCCAAGAAGAGGGAGGAGAAAAGGAAGAAGCAGGAGGAGGAGCGCCGGTTGAAGGAGGAAGAGAAGAAGAAGAAGGCCGCTGCAACAGCAGCTGCTAGTGGAGAGCCCCCGAAGGAATCTGCCGCCGACGATGAGGAAATGGATCCCACTCAATATTATGAGAATCGCCTCAAGGCACTTGATTCACTCAAGGCCACGGGTGTAAACCCCTATCCCCATAAGTTCCTGGCTAATATTACCGTAGCCGATTATATTGAGAAATACAAGAGCATGAATGTTGGGGATAAGCTTGTTGACGTCACCGAGTGCCTAGCAGGGAGGATCATGACCAAGAGAGCGCAATCTTCCAAGCTCTTATTTTATGATCTTTATGGTGGTGGTGAGAAAGTTCAAGTTTTTGCTGATGCCAGGACCTCAGAGTTGGAAGATAATGAATTCATTAAGTTTCACTCTACTCTGAAACGAGGTGATATTGTTGGTGTATGTGGTTATCCAGGAAAGAGCAAGAGAGGGGAGCTCAGTATATTCCCAAAGAAAATTGTTGTGCTCTCCCCATGCCTTCATATGATGCCTCGACAGAAGAGTGAGGGAAGTGCTGTTCCCACTCCATGGGCTCCAGGAATGGGTAGGAACATCGAAAAGTATGTTTTGAGGGACCAGGAAACCCGATATCGTCAACGATATCTTGATCTCATGGTAAACCATGAAGTGAGGCATATATTCAAGACAAGATCAAA ] [-] EMBL CB627678 [ ATTGACCAATTAGAGGCTATGGCTAAACTCAATATACCTAAAGATCTCTCAAGTGATGAAGCAAACAAGTATTTGATAGATGCCTGTGCCAAATATGATGTCAAATGCCCACCTCCCCAGACTACAACACGGTTGCTTGATAAGCTAGTTGGCCATTTCTTGGAGGAGACATGTGTGAATCCCACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGGCAAAGTGGCATAGGTCTCGACCTGGATTGACTGAGAGGTTTGAGCTCTTTGTTAACAAGCATGAGGTGTGCAATGCATATACAGAGTTAAATGATCCTGTTGTTCAGAGGCAACGGTTTGAGGAACAACTAAAGGATCGTCAATCTGGTGATGATGAAGCTATGGCATTGGATGAAACATTCTGCACAGCCCTTGAGTATGGCCTACCACCGACTGGTGGTTGGGGATTGGGAATTGATCGCCTTACAATGTTGCTGACTGATTCTCAGAATATCAAGGAAGTTCTTCTATTCCCGGCTATGAAGCCTCAAGATTAGATATGTCCACAAAGCAGGAACCTGTCAGAAGGATTAAAGCAGACTGAATGCTGACTGAGAGGATTTCAATTGGCCCTCGAGATGGAGGATTTGAAGGAAACTTATAATTTTGTTTTAATTGTGCATGTGAGGTTTCCATGTCCTATTGTACTTTATTTTTGGAGAACATTGGTGGTCAGTTAAGCAAACAGTTAATCTCGCTGCAAAGATATCAAGCGTAACTTATAAGATGAAAAGAGTTTGTGCAATTTCTGTGGCCT ] [-] EMBL CB644606 [ AGTGATGAAGCAAACAAGTATTTGATAGATGCCTGTGCCAAATATGATGTCAAATGCCCACCTCCCCAGACTACAACACGGTTGCTTGATAAGCTAGTTGGCCATTTCTTGGAGGAGACATGTGTGAATCCCACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGGCAAAGTGGCATAGGTCTCGACCTGGATTGAATGAGAGGTTTGAGCTCTTTGTTAACAAGCATGAGGTGTGCAATGCATATACAGAGTTAAATGATCTTGTTGTTCAGAGGCAACGGTTTGAGGAACAACTAAAGGATCGTCAATCTGGTGATGATGAAGCTATGGCATTGGATGAAACATTCTGCACAGCCCTTGAGTATGGCCTACCACCGACTGGTGGTTGGGGATTGGGAATTGATCGCCTTACAATGTTGCTGCCTGATTCTCAGAATATCAAGGAAGTTCTTCTATTCCCGGTTATGAAGCCTCAAGATTAGATATGTCCACAAAGCAGGAACCTGTCAGAAGGATTAAAGCAGATTGAATGCTGATTGAGAGGATTTCAATTGGCCCTCGAGATGGAGGATTTGAAGGAAACTTATAATTTTGTTTTAATTGTGCATGTGAGGTTTCCATGTCCTATTGTACTTTATTTTTGGAGAACATTGGTGGTCAGTTAAGCAAACAGTTAATCTCGCTGCAAAGATATCAAGGGTAACTTATAAGAT ] [-] EMBL CF321534 [ TCCCACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGGCAAAGTGGCATAGGTCTCGACCTGGATTGACTGAGAGGTTTGAGCTCTTTGTTAACAAGCATGAGGTGTGCAATGCATATACAGAGTTAAATGATCCTGTTGTTCAGAGGCAACGGTTTGAGGAACAACTAAAGGATCGTCAATCTGGTGATGATGAAGCTATGGCATTGGATGAAACATTCTGCACAGCCCTTGAGTATGGCCTACCACCGACTGGTGGTTGGGGATTGGGAATTGATCGCCTTACAATGTTGCTGACTGATTCTCAGAATATCAAGGAAGTTCTTCTATTCCCGGCTATGAAGCCTCAAGATTAGATATGTCCACAAAGCAGGAACCTGTCAGAAGGATTAAAGCAGACTGAATGCTGACTGAGAGGATTTCAATTGGCCCTCGAGATGGAGGATTTGAAGGAAACTTATAATTTTGTTTTAATTGTGCATGTGAGGTTTCCATGTCCTATTGTACTTTATTTTTGGAGAACATTGGTGGTCAGTTAAGCAAACAGTTAATCTCGCTGCAAAGATATCAAGCGTAACTTATAAGATGACTTAAGTTTGTGCAAaaa ] [+] EMBL OSS1351A [ CACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGGCAAAGTGGCATAGGTCTCGACCTGGATTGACTGAGAGGTTTGAGCTCTTTGTTAACAAGCATGAGGTGTGCAATGCATATACAGAGTTAAATGATCCTGTTGTTCAGAGGCAACGGTTTGAGGAACAACTAAAGGATCGTCAATCTGGTGATGATGAAGCTATGGCATTGGATGAAACATTCTGCACAGCCCTTGAGTATGGCCTACCACCGACTGGTGGTTGGGGATTGGGAATTGATCGCCTTACAATGTTGCTGACTGATTCTCAGAATATCAAGGAAGTTCTTCTATTCCCGGCTATGAAGCC ] [+] EMBL AA752587 [ AGTTAAATGATCCTGTTGTTCAGAGGCAACGGTTTGAGGAACAACTAAAGGATCGTCAATCTGGTGATGATGAAGCTATGGCATTGGATGAAACATTCTGCACAGCCCTTGAGTATGGCCTACCACCGACTGGTGTTTGGGGATTGGGAATTGATCGCCTTACAATGTTGCTGACTGATTCTCAGAATATCAAGGAAGTTCTTCTATTCCCGGCTATGAAGCCTCAAGATTAGATATGTCCACAAAGCAGGAACCTGTCAGAAGGATTAAAGCAGACTGAATGCTGACTGAGAGGATTTCAATTGGCCCTCGAGATGGAGGATTTGAAGGAAACTTATAATTTTGTTTTAATTGTGCATGTGAGGTTTCCATGTCCTATTGTACTTTATTTTTGGAGAACATTGGTGGTCAGTTAAGCAAACAGTTA ] [+] EMBL AA751176 [ TGGCCTACCACCGACTGGT GTTGGGGATTGGGAATTGATCNCCTTACAATGTTGCTGACTGATTCTCAGAATATCAAGGAAGTTCTTCTATTCCCGGCTATGAAGCCTCAAGATTAGATATGTCCACAAAGCAGGAACCTGTCAGAAGGATTAAAGCAGACTGAATGCTGACTGAGAGGA TTCA T NCCTCGAGATGGAGGA TTGA G AAC TATAATcgacta ] consensusID : consensus_13291#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 542 fasta sequence [CATGGACTGAGGAGTAGAAATAAACATGAGGCTTTATATGCGTATTGCTCCTGAGCTCTATCTGAAGGAATTGGTTGTTGGGGGGCTGGATCGTGTTTATGAAATTGGGAAGCAGTTCAGGAATGAAGGAATTGACCTGACGCACAATCCTGAATTCACAACATGTGAATTTTATATGGCATATGCAGATTACAATGACTTGATAGAGCTTACTGAAACCATGTTATCTGGTATGGTTAAGGAGTTGACAGGTGGCTACAAGATTAAATATCATGCTAACGGAGTTGAGAAACCACCAATAGAGATTGATTACACACCTCCCTTCAGAAAGATAGACATGATTGAAGAATTAGAGGCTATGGCTAAACTCAATATACCTAAAGATCTCTCAAGTGATGAAGCAAACAAGTATTTGATAGATGCCTGTGCCAAATATGATGTCAAATGCCCACCTCCCCAGACTACAACACGGTTGCTTGATAAGGAGACATGTGTGAATCCCACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGG] [+] EMBL CF321533 [CATGGACTGAGGAGTAGAAATAAACATGAGGCTTTATATGCGTATTGCTCCTGAGCTCTATCTGAAGGAATTGGTTGTTGGGGGGCTGGATCGTGTTTATGAAATTGGGAAGCAGTTCAGGAATGAAGGAATTGACCTGACGCACAATCCTGAATTCACAACATGTGAATTTTATATGGCATATGCAGATTACAATGACTTGATAGAGCTTACTGAAACCATGTTATCTGGTATGGTTAAGGAGTTGACAGGTGGCTACAAGATTAAATATCATGCTAACGGAGTTGAGAAACCACCAATAGAGATTGATTACACACCTCCCTTCAGAAAGATAGACATGATTGAAGAATTAGAGGCTATGGCTAAACTCAATATACCTAAAGATCTCTCAAGTGATGAAGCAAACAAGTATTTGATAGATGCCTGTGCCAAATATGATGTCAAATGCCCACCTCCCCAGACTACAACACGGTTGCTTGATAAGGAGACATGTGTGAATCCCACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGG] consensusID : consensus_13291#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 383 fasta sequence [ACCCCCCTTCTCCCTTGCGCCTCCGCTTCGCGAGCCTCATCTCCTCGATCTCTTTCGATTCAGTGGAAAACCTAGGAGACCGGCGCGGCATGGCGGAGTCGGGCTCGTCGGGCCTGGAGGAGAAGCTGGCGGGTCTCTCCGCGGGCTGCGGCGAGGAGCCGCANAAGCTCTCGAAGAATGCCAAGAAGAGGGAGGAGAAAAGGAAGAAGCAGGAGGAGGAGCGCCGGTTGAAGGAGGAAGAGAAGAAGAAGAAGGCCGCTGCAACAGCAGCTGCTAGTGGAGAGCCCCCGAAGGAATCTGCCGCCGACGATGAGGAAATGGATCCCACTACATGTGTTTCTTGCTGCAGCAATATTATGAGAATCGCCTCAAGGCACTTGATT] [+] EMBL AU068952 [ACCCCCCTTCTCCCTTGCGCCTCCGCTTCGCGAGCCTCATCTCCTCGATCTCTTTCGATTCAGTGGAAAACCTAGGAGACCGGCGCGGCATGGCGGAGTCGGGCTCGTCGGGCCTGGAGGAGAAGCTGGCGGGTCTCTCCGCGGGCTGCGGCGAGGAGCCGCANAAGCTCTCGAAGAATGCCAAGAAGAGGGAGGAGAAAAGGAAGAAGCAGGAGGAGGAGCGCCGGTTGAAGGAGGAAGAGAAGAAGAAGAAGGCCGCTGCAACAGCAGCTGCTAGTGGAGAGCCCCCGAAGGAATCTGCCGCCGACGATGAGGAAATGGATCCCACTACATGTGTTTCTTGCTGCAGCAATATTATGAGAATCGCCTCAAGGCACTTGATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13291#0 CTAACCCTAGCTAAACCCCCCTTCTCCCTTGCGCCTCCGCTTCGCGAGCCTCATCTCCTC 60 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 GATCTCTTTCGATTCAGTGGAAAACCTAGGAGACCGGCGCGGCATGGCGGAGTCGGGCTC 120 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 GTCGGGCCTGGAGGAGAAGCTGGCGGGTCTCTCCGCGGGCTGCGGCGAGGAGCCGCAGCA 180 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 GCTCTCGAAGAATGCCAAGAAGAGGGAGGAGAAAAGGAAGAAGCAGGAGGAGGAGCGCCG 240 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 GTTGAAGGAGGAAGAGAAGAAGAAGAAGGCCGCTGCAACAGCAGCTGCTAGTGGAGAGCC 300 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 CCCGAAGGAATCTGCCGCCGACGATGAGGAAATGGATCCCACTCAATATTATGAGAATCG 360 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 CCTCAAGGCACTTGATTCACTCAAGGCCACGGGTGTAAACCCCTATCCCCATAAGTTCCT 420 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 GGCTAATATTACCGTAGCCGATTATATTGAGAAATACAAGAGCATGAATGTTGGGGATAA 480 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 GCTTGTTGACGTCACCGAGTGCCTAGCAGGGAGGATCATGACCAAGAGAGCGCAATCTTC 540 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 CAAGCTCTTATTTTATGATCTTTATGGTGGTGGTGAGAAAGTTCAAGTTTTTGCTGATGC 600 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 CAGGACCTCAGAGTTGGAAGATAATGAATTCATTAAGTTTCACTCTACTCTGAAACGAGG 660 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 TGATATTGTTGGTGTATGTGGTTATCCAGGAAAGAGCAAGAGAGGGGAGCTCAGTATATT 720 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 CCCAAAGAAAATTGTTGTGCTCTCCCCATGCCTTCATATGATGCCTCGACAGAAGAGTGA 780 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 GGGAAGTGCTGTTCCCACTCCATGGGCTCCAGGAATGGGTAGGAACATCGAAAAGTATGT 840 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 TTTGAGGGACCAGGAAACCCGATATCGTCAACGATATCTTGATCTCATGGTAAACCATGA 900 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 AGTGAGGCATATTTTCAAGACAAGATCAAAAGTTGTCTCTTTTATTCGGAAATTTCTTGA 960 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 TGGTCTTGACTTTTTAGAGGTGGAGACTCCAATGATGAACATGATTGCAGGTGGAGCAGC 1020 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 TGCAAGGCCTTTTGTCACACATCATAATGAGTTAAACATGAGGCTTTATATGCGTATTGC 1080 consensus_13291#1 ------------CATGGACTGAGGAGTAGAAATAAACATGAGGCTTTATATGCGTATTGC 48 consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 TCCTGAGCTCTATCTGAAGGAATTGGTTGTTGGGGGGCTGGATCGTGTTTATGAAATTGG 1140 consensus_13291#1 TCCTGAGCTCTATCTGAAGGAATTGGTTGTTGGGGGGCTGGATCGTGTTTATGAAATTGG 108 consensus_13291#2 -----------------------------------------ACCCCCCTTCTCCCTTGCG 19 * * ** * * * consensus_13291#0 GAAGCAGTTCAGGAA--TGAAGGAATTGACCTGACGCACAATCCTGAATTCACAACATGT 1198 consensus_13291#1 GAAGCAGTTCAGGAA--TGAAGGAATTGACCTGACGCACAATCCTGAATTCACAACATGT 166 consensus_13291#2 CCTCCGCTTCGCGAGCCTCATCTCCTCGATCT--CTTTCGATTC--AGTGGAAAACCTAG 75 * *** ** * * * ** ** * * ** * * * * *** * consensus_13291#0 GAATTTTATATGGCATATGCAGATTACAATGACTTGATAGAGCTTACTGAAACCATGTTA 1258 consensus_13291#1 GAATTTTATATGGCATATGCAGATTACAATGACTTGATAGAGCTTACTGAAACCATGTTA 226 consensus_13291#2 GAGACCGGCGCGGCATG-GCGGAGT----CGGGCTCGTCGGGCCTG--GAGGAGAAGCTG 128 ** ***** ** ** * * * * * ** * ** * * * consensus_13291#0 TCTGGTATGGTTAAGGAGT-TGACAGGTGGCTACAAGA--TTAAATATCATGCTAACGGA 1315 consensus_13291#1 TCTGGTATGGTTAAGGAGT-TGACAGGTGGCTACAAGA--TTAAATATCATGCTAACGGA 283 consensus_13291#2 GCGGGTCTCTCCGCGGGCTGCGGCGAGGAGCCGCANAAGCTCTCGAAGAATGCCAAGAAG 188 * *** * ** * * * * ** ** * * * **** ** consensus_13291#0 GTTGAGAAACCACCAATAGAGATTGATTCCACACCTCCCTTCAGAAAGATAGACGTGATT 1375 consensus_13291#1 GTTGAGAAACCACCAATAGAGATTGATTACACACCTCCCTTCAGAAAGATAGACATGATT 343 consensus_13291#2 AGGGAGGAGAAAAGGAAGAAGCAGGAGGAGGAGCGCCGGTTGAAGGAGGAAGAGAAGAA- 247 *** * * * ** ** * * ** * ** *** ** consensus_13291#0 GAAGAATTAGAGGCTATGGCTAAACTCAATATACCTAAAGATCTCTCAAGTGATGAAGCA 1435 consensus_13291#1 GAAGAATTAGAGGCTATGGCTAAACTCAATATACCTAAAGATCTCTCAAGTGATGAAGCA 403 consensus_13291#2 GAAGAA-----GGCCGCTGCAACAGCAGCTGCTAGTGGAGAGCCCCCGAAGGAATCTGCC 302 ****** *** ** * * * * *** * * * * ** ** consensus_13291#0 AACAAGTATTTGATAGATGCCTGTGCCAAATATGATGTCAAATGC--CCACCTCCCCAGA 1493 consensus_13291#1 AACAAGTATTTGATAGATGCCTGTGCCAAATATGATGTCAAATGC--CCACCTCCCCAGA 461 consensus_13291#2 GCCGACGATGAGGAAATGGATCCCACTACATGTGTTTCTTGCTGCAGCAATATTATGAGA 362 * * ** * * * * * ** ** * *** * * * *** consensus_13291#0 CTACAACACGGTTGCTTGATAAGCTAGTTGGCCATTTCTTGGAGGAGACATGTGTGAATC 1553 consensus_13291#1 CTACAACACGGTTGCTTGATAAG---------------------GAGACATGTGTGAATC 500 consensus_13291#2 ATCGCCTCAAGGCACTTGATT--------------------------------------- 383 * * ****** consensus_13291#0 CCACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGGCAAAGTGGCATAGGTCTC 1613 consensus_13291#1 CCACGTTTATTATCAACCATCCAGAGATAATGAGTCCATTGG------------------ 542 consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 GACCTGGATTGACTGAGAGGTTTGAGCTCTTTGTTAACAAGCATGAGGTGTGCAATGCAT 1673 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 ATACAGAGTTAAATGATCCTGTTGTTCAGAGGCAACGGTTTGAGGAACAACTAAAGGATC 1733 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 GTCAATCTGGTGATGATGAAGCTATGGCATTGGATGAAACATTCTGCACAGCCCTTGAGT 1793 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 ATGGCCTACCACCGACTGGTGGTTGGGGATTGGGAATTGATCGCCTTACAATGTTGCTGA 1853 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 CTGATTCTCAGAATATCAAGGAAGTTCTTCTATTCCCGGCTATGAAGCCTCAAGATTAGA 1913 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 TATGTCCACAAAGCAGGAACCTGTCAGAAGGATTAAAGCAGACTGAATGCTGACTGAGAG 1973 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 GATTTCAATTGGCCCTCGAGATGGAGGATTTGAAGGAAACTTATAATTTTGTTTTAATTG 2033 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 TGCATGTGAGGTTTCCATGTCCTATTGTACTTTATTTTTGGAGAACATTGGTGGTCAGTT 2093 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 AAGCAAACAGTTAATCTCGCTGCAAAGATATCAAGCGTAACTTATAAGATGACTTAAGTT 2153 consensus_13291#1 ------------------------------------------------------------ consensus_13291#2 ------------------------------------------------------------ consensus_13291#0 TGTGCAATTTCTGTGGCCTTACTTGAAAATGATAGCGCGTTATT 2197 consensus_13291#1 -------------------------------------------- consensus_13291#2 -------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||