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Oryza sativa
cluster # 1330 cluster # 1330       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1330#0 length = 1157 sequences # 2  

consensusID : consensus_1330#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1157
fasta sequence
                              [GGGTAATTCCAACGCTCCAAATAGCGTTATATTTTAAGTTGTTCAAGTTAAAAAAGTCTCGTATGTTGGACCTTGGTCCAGGGCACGCCAGGTCCGCCTCACGGCGAGCACCGGACCTGCTCGACCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCAGTGCCTCCAGGCAGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCAGGTCCTATTGTGTT-GCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAAAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGGCACCTTATGAGAAATCAAAGGTCTCTCCTAGCTGCAATATACCACTAGCAGCAGGGCGCCCAGTTGCGCGATCGATCGATCGAGCTCCGTGGTGCCAAGAACGCCCTGTACGGCGCGCCGGTATGTGCGTGGAGGAGTCGGAGGGCGCGGAGAGGCTGGATTTTGGGGAGCCCGCCGCCGCCGCCGCCGACGCCGGGAAGAGCAAGAGCAAGAGCCCCGACGAACTCCCCTCGCCTCGGGTTCGTTTGATTTCCCTTCATGGCGTGAAGGAAGGAAGGACGATGATGATGAGATTGGGAAGGAAGGAAGGAAGGAAGGAAGCAAAGCATGCCCTTCTGGGTGCTTGCTTTGTGCACACGCCTCTTCCGTTTCTTGAAACACATGGAGTATTATTAGAAGTGATTGTGATTCTTTTTTCTTGTTTAATTATTACTGCTAGCTAGTACTGATTGTGCCTAGACTGATCGTGTGTGTGGAGGAGTTAAGTTTTCTGCATTTGTTAGCTGCGAAGTTTGGTGGCCTGGTAGGTGTTCTTCTTGCCAATGTGTGATGATACTACTACTAATACTACGTTATTGGTCACCTGTTCATTGCATTGTTCATTGGTACTTTGATTTTGTACTGAATATATATAATTATAGT]

[+] EMBL BI795434             [GGGTAATTCCAACGCTCCAAATAGCGTTATATTTTAAGTTGTTCAAGTTAAAAAAGTCTCGTATGTTGGACCTTGGTCCAGGGCACGCCAGGTCCGCCTCACGGCGAGCACCGGACCTGCTCGACCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCAGTGCCTCCAGGCAGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCAGGTCCTATTGTGTT GCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK108271             [                                                                                                                                                                                                       TTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCC GGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGGCACCTTATGAGAAATCAAAGGTCTCTCCTAGCTGCAATATACCACTAGCAGCAGGGCGCCCAGTTGCGCGATCGATCGATCGAGCTCCGTGGTGCCAAGAACGCCCTGTACGGCGCGCCGGTATGTGCGTGGAGGAGTCGGAGGGCGCGGAGAGGCTGGATTTTGGGGAGCCCGCCGCCGCCGCCGCCGACGCCGGGAAGAGCAAGAGCAAGAGCCCCGACGAACTCCCCTCGCCTCGGGTTCGTTTGATTTCCCTTCATGGCGTGAAGGAAGGAAGGACGATGATGATGAGATTGGGAAGGAAGGAAGGAAGGAAGGAAGCAAAGCATGCCCTTCTGGGTGCTTGCTTTGTGCACACGCCTCTTCCGTTTCTTGAAACACATGGAGTATTATTAGAAGTGATTGTGATTCTTTTTTCTTGTTTAATTATTACTGCTAGCTAGTACTGATTGTGCCTAGACTGATCGTGTGTGTGGAGGAGTTAAGTTTTCTGCATTTGTTAGCTGCGAAGTTTGGTGGCCTGGTAGGTGTTCTTCTTGCCAATGTGTGATGATACTACTACTAATACTACGTTATTGGTCACCTGTTCATTGCATTGTTCATTGGTACTTTGATTTTGTACTGAATATATATAATTATAGT]


>consensus_1330#0 GGGTAATTCCAACGCTCCAAATAGCGTTATATTTTAAGTTGTTCAAGTTAAAAAAGTCTC GTATGTTGGACCTTGGTCCAGGGCACGCCAGGTCCGCCTCACGGCGAGCACCGGACCTGC TCGACCCTTCTGCCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCAGTGCCTCCAGGC AGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGC ATGGGATAACATCATAGGATTCCAGGTCCTATTGTGTTGCCTTCGGGATCGGAGTAATGA TTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA TGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAAAACGAAA GTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCA GGGATCGGCGGATGTTGCTTATAGGACTCCGCCGGCACCTTATGAGAAATCAAAGGTCTC TCCTAGCTGCAATATACCACTAGCAGCAGGGCGCCCAGTTGCGCGATCGATCGATCGAGC TCCGTGGTGCCAAGAACGCCCTGTACGGCGCGCCGGTATGTGCGTGGAGGAGTCGGAGGG CGCGGAGAGGCTGGATTTTGGGGAGCCCGCCGCCGCCGCCGCCGACGCCGGGAAGAGCAA GAGCAAGAGCCCCGACGAACTCCCCTCGCCTCGGGTTCGTTTGATTTCCCTTCATGGCGT GAAGGAAGGAAGGACGATGATGATGAGATTGGGAAGGAAGGAAGGAAGGAAGGAAGCAAA GCATGCCCTTCTGGGTGCTTGCTTTGTGCACACGCCTCTTCCGTTTCTTGAAACACATGG AGTATTATTAGAAGTGATTGTGATTCTTTTTTCTTGTTTAATTATTACTGCTAGCTAGTA CTGATTGTGCCTAGACTGATCGTGTGTGTGGAGGAGTTAAGTTTTCTGCATTTGTTAGCT GCGAAGTTTGGTGGCCTGGTAGGTGTTCTTCTTGCCAATGTGTGATGATACTACTACTAA TACTACGTTATTGGTCACCTGTTCATTGCATTGTTCATTGGTACTTTGATTTTGTACTGA ATATATATAATTATAGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)