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Oryza sativa
cluster # 13307 cluster # 13307       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13307#0 length = 725 sequences # 5  
consensus_13307#1 length = 664 sequences # 5  
consensus_13307#2 length = 481 sequences # 1  
consensus_13307#3 length = 460 sequences # 1  

consensusID : consensus_13307#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 725
fasta sequence
                              [TCGCCTTTTTCTGAGACTCAGAGCGGCGGCGAGCGCCGGCCGGTCGCCG-GCGGAGGAGTTGGTGTGGAGAGGGCGGGGAGATGGTTGTCCGGATCAGGCTGGCGCGGTTCGGCTGCCGGAACAGGCCCTTCTACCGGCTCATGGCCGCCGACAGCCGCTCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACGACCCGCTCCCCGGGAAGGATGGTGGCAAGAGAATGGGGTTAAAATTCGACCGGGTGAAGTATTGGCTATCAGTTGGAGCACAGCCATCGGATCCTGTGGAGCGCATCCTCTACCGTGCTGGAATTCTACCTCCACCTCCAATGCTAGCTATGGCCCACAAGGGTGGGCCTCGCGACAGACGTCCTATTGATCCCATGACTGGGCGCCCCTTAGACCTTGAGGGTGTCACAGTTGTTGATGATTCTCATACTCCCAAGAGTGGTGATGGAGCACCTAACGAGGAGACAGCATAGATGAGGCATGATGATATATCTGTTTTAGCATATTGTGTGGTTTTGCAAGATTAAAAAGTACTGTTTGTGGCCTTTCTGATGGGTGTTTGAGCCTGTGACTAGTATGTTGTGACCTTTCTTGCTGACCGGCTTTATTGATCTATGCTCCTGTCATCTATTCTCAGGAACACGAACCTGGAAACATGAGTTGTTCTTTTTGATAAAATTTGTATGTTGTGTTCCAAAAAAAAA]

[+] EMBL AK064304             [TCGCCTTTTTCTGAGACTCAGAGCGGCGGCGAGCGCCGGCCGGTCGCCG GCGGAGGAGTTGGTGTGGAGAGGGCGGGGAGATGGTTGTCCGGATCAGGCTGGCGCGGTTCGGCTGCCGGAACAGGCCCTTCTACCGGCTCATGGCCGCCGACAGCCGCTCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACGACCCGCTCCCCGGGAAGGATGGTGGCAAGAGAATGGGGTTAAAATTCGACCGGGTGAAGTATTGGCTATCAGTTGGAGCACAGCCATCGGATCCTGTGGAGCGCATCCTCTACCGTGCTGGAATTCTACCTCCACCTCCAATGCTAGCTATGGCCCACAAGGGTGGGCCTCGCGACAGACGTCCTATTGATCCCATGACTGGGCGCCCCTTAGACCTTGAGGGTGTCACAGTTGTTGATGATTCTCATACTCCCAAGAGTGGTGATGGAGCACCTAACGAGGAGACAGCATAGATGAGGCATGATGATATATCTGTTTTAGCATATTGTGTGGTTTTGCAAGATTAAAAAGTACTGTTTGTGGCCTTTCTGATGGGTGTTTGAGCCTGTGACTAGTATGTTGTGACCTTTCTTGCTGACCGGCTTTATTGATCTATGCTCCTGTCATCTATTCTCAGGAACACGAACCTGGAAACATGAGTTGTTCTTTTTGATAAAATTTGTAT                   ]
[+] EMBL AU029873             [                CTCAGAGCGGCGGCGAGCG CGGCCGGTCGCCGNGGNAAGGAGTTGGTGTGGAGAGGGCGGGGAGATGGTTGTCCGGATCAGGCTGGCGCGGTTCGGCTGCCGGAACAGGCCCTTCTACCGGCTCATGGCCGCCGACAGCCGCTCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACGACCCGCTCCCCGGGAAGGATGGTGGCAAGAGAATGGGGTTAAAATTCGACCGGGTGAAGTATTGGCTATCAGTTGGAGCACAGCCATCGGATCCTGTGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF334286             [                                                                        GGCGGAGAGATGGTTGTCCGGATCATGCTGGCGCGGTTCGGCTGCCGGAACAGGCCCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF281214             [                                                                                                                                                                                                                 CCCCGGGAAGGATGGTGGCAAGAGAATGGGGTTAAAATTCGACCGGGTGAAGTATTGGCTATCAGTTGGAGCACAGCCATCGGATCCTGTGGAGCGCATCCTCTACCGTGCTGGAATTCTACCTCCACCTCCAATGCTAGCTATGGCCCACAAGGGTGGGCCTCGCGACAGACGTCCTATTGATCCCATGACTGGGCGCCCCTTAGACCTTGAGGGTGTCACAGTTGTTGATGATTCTCATACTCCCAAGAGTGGTGATGGAGCACCTAACGAGGAGACAGCATAGATGAGGCATGATGATATATCTGTTTTAGCATATTGTGTGGTTTTGCAAGATTAAAAAGTACTGTTTGTGGCCTTTCTGATGGGTGTTTGAGCCTGTGACTAGTATGTTGTGACCTTTCTTGCTGACCGGCTTTATTGATATATGCTCCTGTCATCTATTCTCAGGAACACGAACCTGGAAACATGAGTTGTTCTTTTTGATAAAATTTGTATGTTGTGTTCCAAAAAAAAA]
[-] EMBL AU165103             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGAGACAGCATAGATGAGGCATGATGATATATCTGTTTTAGCATATTGTGTGGTTTTGCAAGATTAAAAAGTACTGTTTGTGGCCTTTTTGATGGGTGTTTGAGCCTGTGACTAGTATGTTGTGACCTTTCTTGCTGACCGGCTTTATTGATCTATGCTCCTGTCAaaaaa                                                                         ]


>consensus_13307#0 TCGCCTTTTTCTGAGACTCAGAGCGGCGGCGAGCGCCGGCCGGTCGCCGGCGGAGGAGTT GGTGTGGAGAGGGCGGGGAGATGGTTGTCCGGATCAGGCTGGCGCGGTTCGGCTGCCGGA ACAGGCCCTTCTACCGGCTCATGGCCGCCGACAGCCGCTCCCCGCGCGACGGCAAGCACC TCGAGGTCCTCGGCTACTACGACCCGCTCCCCGGGAAGGATGGTGGCAAGAGAATGGGGT TAAAATTCGACCGGGTGAAGTATTGGCTATCAGTTGGAGCACAGCCATCGGATCCTGTGG AGCGCATCCTCTACCGTGCTGGAATTCTACCTCCACCTCCAATGCTAGCTATGGCCCACA AGGGTGGGCCTCGCGACAGACGTCCTATTGATCCCATGACTGGGCGCCCCTTAGACCTTG AGGGTGTCACAGTTGTTGATGATTCTCATACTCCCAAGAGTGGTGATGGAGCACCTAACG AGGAGACAGCATAGATGAGGCATGATGATATATCTGTTTTAGCATATTGTGTGGTTTTGC AAGATTAAAAAGTACTGTTTGTGGCCTTTCTGATGGGTGTTTGAGCCTGTGACTAGTATG TTGTGACCTTTCTTGCTGACCGGCTTTATTGATCTATGCTCCTGTCATCTATTCTCAGGA ACACGAACCTGGAAACATGAGTTGTTCTTTTTGATAAAATTTGTATGTTGTGTTCCAAAA AAAAA



consensusID : consensus_13307#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 664
fasta sequence
                              [TGCTCCCACAGGAGTGAACACGACGCGACCCGAGCCGGAGAAGGGGAAGGGAAGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCGCGAGGGGAGGCGAGCATGGTGGTGCGGATCCGGCTGGCGCGGTTCGGCTGCCGGAACCGGCCGTTCTACCGGGTGATGGCCGCCGACAGCCGCTCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACAACCCGCTCCCCGGGAAGGATGGTGGCAAGAGGATGGGGCTGAAATTCGACAGGGTCAAGTACTGGCTGTCTGTTGGTGCTCAGCCATCAGATCCTGTGCAGCG-ATCCTTTTTCGAGCTGGGCTTCTG-CTCCACCTCCAATGCTAGCTATGGCTCGAAAGGGTGGACCTCGTGATAGGCGCCCAATTCATCCGATGACTGGGCGCCCCTTGGATCTTGAGGGTGTCACGGTTGTTGATGACTCCAATGTTCCCGAAGGTGGTGCTGAGGAACCTGTGTCAGAGGAGTGATGCTGCAGTAGGTCTCCACTTG-TTTGTTGTGCCTCTGATAAGATCATGAGTACTGTACAATATGGAAACTTCCTAATC-ATGTAATCTTCCATTGTTTTCTAATAATTTAC-AAGGTCGTAGTGCTGCACTAAAAGTTAAAAAAAAAAAAAAAAA]

[+] EMBL AK064108             [TGCTCCCACAGGAGTGAACACGACGCGACCCGAGCCGGAGAAGGGGAAGGGAAGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCGCGAGGGGAGGCGAGCATGGTGGTGCGGATCCGGCTGGCGCGGTTCGGCTGCCGGAACCGGCCGTTCTACCGGGTGATGGCCGCCGACAGCCGCTCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACAACCCGCTCCCCGGGAAGGATGGTGGCAAGAGGATGGGGCTGAAATTCGACAGGGTCAAGTACTGGCTGTCTGTTGGTGCTCAGCCATCAGATCCTGTGCAGCGCATCCTTTTTCGAGCTGGGCTTCTGCCTCCACCTCCAATGCTAGCTATGGCTCGAAAGGGTGGACCTCGTGATAGGCGCCCAATTCATCCGATGACTGGGCGCCCCTTGGATCTTGAGGGTGTCACGGTTGTTGATGACTCCAATGTTCCCGAAGGTGGTGCTGAGGAACCTGTGTCAGAGGAGTGATGCTGCAGTAGGTCTCCACTTG TTTGTTGTGCCTCTGATAAGATCATGTGTACTGTACAATATGGAAACTTCCTAATC ATGTAATCTTCCATTGTTTTCTAATAATTTAC AAGGTCGTAGTG                               ]
[+] EMBL OS0019A              [                 ACACGACGCGACCCGAGCCGGAGAAGGGGAAGGGAAGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCGCGAGGGGAGGCGAGCATGGTGGTGCGGATCCGGCTGGCGCGGTTCGGCTGCCGGAACC GCCGTTCTACCGGGTGATGGCCGCCGACAGCCGCTNCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACAACCCGCTNCCCGGGAAGGATGGTGGCAAGAGGATGGGGCTTAAATTCGACAGGGTCAAGTACTNGCTGTCTGTTGGTGCTNAGCCATCAGATCCTGTTCAang                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU063508             [                                                                                                                                                                                                                                     TCCCCGGGAAGGATGGTGGCAAGAGGATGGGGCTGAAATTCGACAGGGTCAAGTACTGGCTGTCTGTTGGTGCTCAGCCATCAGATCCTGTGCAGCG ATCCTTTTTCGAGCTGGGCTTCTG CTCCACCTCCAATGCTAGCTATGGCTCGAAAGGGTGGACCTCGTGATAGGCGCCCAATTCATCCGATGACTGGGCG CCCTTGGATCTTGAGGGTGTCACGGTTGTTGATGACTCCAATGTTCCCGAA GTGGTGCTGAGGAACCTGTGTCAGAGGAGTGATGCTGCAGTAGGTCTCCACTTG TTTGTTGTGCCTCTGATAAGATCATGAGTACTGTACAATATGG AACTTCCTAATC ATGTAATCTTCCATNGTTTTCTAATAATTTACAAAGGTCGTAGTGCTGCACTAAA                     ]
[+] EMBL C28776               [                                                                                                                                                                                                                                      CCCCGGGAAGGATGGTGGCAAGAGGATGGGGCTGAAATTCGACAGGGTCAAGTACTGGCTGTCTGTTGGTGCTCAGCCATCAGATCCTGTGCAGCG ATCCTTTTTCGAGCTGGGCTTCTG CTCCACCTCCAATGCTAGCTATGGCTCGAAAGGGTGGACCTCGTGATAGGCGCCCAATTCATCCGATGACTGGGCG CCCTTGGATCTTGAGGGTGTCACGGTTGTTGATGACTCCAATGTTCCCGAAGTGGGTGCTGAGGAACCTGTGTCAGAGGAGTGATGCTGCAGTAGGTCTCCACTTGTTTTGTTGTGCCTCTGATAAGATCATGAGTACTGTACAATATGGAAACTTCCTAATCAATGTAATCTTCCATTGTTTTCTAATAAATTA                                             ]
[+] EMBL OSC00193             [                                                                                                                                                                                                                                                                                                                                                                                                    GACCNCGTGATAGGCGCCCAATTCATCCGATGACTGGNCNCACCTTGGATCTTGAGGGTGTCACGGTTGTTGATGACTCCAATGTTCCCGAAGGTGGTGCTGAGGAACCTGTGTCAGAGGAGTGATGCTGCAGTAGGTCTCCACTTG TTTGTTGTGCCTCTGATAAGATCATGAGTACTGTACAATATGGAAACTTCCTAATC ATGTAATCTTCCATTGTTTTCTAATAATTTAC AAGGTCGTAGTGCTGCACTATGAGTTAAAAAAAAAAAAAAAAA]


>consensus_13307#1 TGCTCCCACAGGAGTGAACACGACGCGACCCGAGCCGGAGAAGGGGAAGGGAAGGCGGCG GCGGCGGCGGCGGAGGAGGAGGAGGCGCGAGGGGAGGCGAGCATGGTGGTGCGGATCCGG CTGGCGCGGTTCGGCTGCCGGAACCGGCCGTTCTACCGGGTGATGGCCGCCGACAGCCGC TCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACAACCCGCTCCCCGGGAAG GATGGTGGCAAGAGGATGGGGCTGAAATTCGACAGGGTCAAGTACTGGCTGTCTGTTGGT GCTCAGCCATCAGATCCTGTGCAGCGATCCTTTTTCGAGCTGGGCTTCTGCTCCACCTCC AATGCTAGCTATGGCTCGAAAGGGTGGACCTCGTGATAGGCGCCCAATTCATCCGATGAC TGGGCGCCCCTTGGATCTTGAGGGTGTCACGGTTGTTGATGACTCCAATGTTCCCGAAGG TGGTGCTGAGGAACCTGTGTCAGAGGAGTGATGCTGCAGTAGGTCTCCACTTGTTTGTTG TGCCTCTGATAAGATCATGAGTACTGTACAATATGGAAACTTCCTAATCATGTAATCTTC CATTGTTTTCTAATAATTTACAAGGTCGTAGTGCTGCACTAAAAGTTAAAAAAAAAAAAA AAAA



consensusID : consensus_13307#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 481
fasta sequence
                              [GCGGCGGCGGCGGCGGAGGAGGAGGAGGCGCGAGGGGAGGCGAGCATGGTGGTGCGGATCCGGCTGGCGCGGTTCGGCTGCCGGAACCGGCCGTTCTACCGGGTGATGGCCGCCGACAGCCGCTCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACAACCCGCTCCCCGGGAAGNATGGTGGCAAGAGGATGGGGCTGAAATTCGACAGGGTCAAGTACTGGCTGTCTGTTGGTGCTCAGCCATCAGATCCTGTGCAGCGCATCCTTTTTCGAGCTGGGCTTCTGCCTCCACCTCCAATGCTAGCTATGGCTCGAAAGGGNTGGACCTCGTGATTAGGCGGCNATNNGTGTNCGNAGNGGGNANTNTCNGTGGNNAATTGGNAATGTTTTNNGGNATTGTGCCNGTNANTNCNNAANNTTGNGNNGATNNGGAATNNCGGNGNGNNCNGGNNNNNTATNTGGGGNCNNCTTT]

[+] EMBL OSC18811             [GCGGCGGCGGCGGCGGAGGAGGAGGAGGCGCGAGGGGAGGCGAGCATGGTGGTGCGGATCCGGCTGGCGCGGTTCGGCTGCCGGAACCGGCCGTTCTACCGGGTGATGGCCGCCGACAGCCGCTCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACAACCCGCTCCCCGGGAAGNATGGTGGCAAGAGGATGGGGCTGAAATTCGACAGGGTCAAGTACTGGCTGTCTGTTGGTGCTCAGCCATCAGATCCTGTGCAGCGCATCCTTTTTCGAGCTGGGCTTCTGCCTCCACCTCCAATGCTAGCTATGGCTCGAAAGGGNTGGACCTCGTGATTAGGCGGCNATNNGTGTNCGNAGNGGGNANTNTCNGTGGNNAATTGGNAATGTTTTNNGGNATTGTGCCNGTNANTNCNNAANNTTGNGNNGATNNGGAATNNCGGNGNGNNCNGGNNNNNTATNTGGGGNCNNCTTT]


>consensus_13307#2 GCGGCGGCGGCGGCGGAGGAGGAGGAGGCGCGAGGGGAGGCGAGCATGGTGGTGCGGATC CGGCTGGCGCGGTTCGGCTGCCGGAACCGGCCGTTCTACCGGGTGATGGCCGCCGACAGC CGCTCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCTACTACAACCCGCTCCCCGGG AAGNATGGTGGCAAGAGGATGGGGCTGAAATTCGACAGGGTCAAGTACTGGCTGTCTGTT GGTGCTCAGCCATCAGATCCTGTGCAGCGCATCCTTTTTCGAGCTGGGCTTCTGCCTCCA CCTCCAATGCTAGCTATGGCTCGAAAGGGNTGGACCTCGTGATTAGGCGGCNATNNGTGT NCGNAGNGGGNANTNTCNGTGGNNAATTGGNAATGTTTTNNGGNATTGTGCCNGTNANTN CNNAANNTTGNGNNGATNNGGAATNNCGGNGNGNNCNGGNNNNNTATNTGGGGNCNNCTT T



consensusID : consensus_13307#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 460
fasta sequence
                              [GCAAGCACCTCGAGGTCCTCGGCTTACTACGACCCGCTCCCCGGGAAGGATGGTGGCAAGAGAATGGGGTTAAAATTCGACCGGGTGAAGTATTGGCTATCAGTTGGAGCACAGCCATCGGATCCTGTGGAGCGCATCCTCTACCGTGCTGGAATTCTACCTCCACCTCCAATGCTAGCTATGGCCCACAAGGGTGGGCCTCGCGACAGACGTCCTATTGATCCCATGACTGGGCGCCCCTTAGACCTTGAGGGTGTCACAGTTGTTGATGATTCTCATACTCCCAAGAGTGGTGATGGAGCNCCTAACGAGGAGACAGCATAGATGAGGCATGATGATATATCTGTTTTAGCATATTGTGTGGTTTTGCAAGATTAAAAAGTACTGTTTGTGGCCTTTCTGATGGGTGTTTGAGCCTGTGACTNGTATGTTGTGNNCTTTCTAAAAAAAAAAAAAAAAA]

[+] EMBL AU101466             [GCAAGCACCTCGAGGTCCTCGGCTTACTACGACCCGCTCCCCGGGAAGGATGGTGGCAAGAGAATGGGGTTAAAATTCGACCGGGTGAAGTATTGGCTATCAGTTGGAGCACAGCCATCGGATCCTGTGGAGCGCATCCTCTACCGTGCTGGAATTCTACCTCCACCTCCAATGCTAGCTATGGCCCACAAGGGTGGGCCTCGCGACAGACGTCCTATTGATCCCATGACTGGGCGCCCCTTAGACCTTGAGGGTGTCACAGTTGTTGATGATTCTCATACTCCCAAGAGTGGTGATGGAGCNCCTAACGAGGAGACAGCATAGATGAGGCATGATGATATATCTGTTTTAGCATATTGTGTGGTTTTGCAAGATTAAAAAGTACTGTTTGTGGCCTTTCTGATGGGTGTTTGAGCCTGTGACTNGTATGTTGTGNNCTTTCTAAAAAAAAAAAAAAAAA]


>consensus_13307#3 GCAAGCACCTCGAGGTCCTCGGCTTACTACGACCCGCTCCCCGGGAAGGATGGTGGCAAG AGAATGGGGTTAAAATTCGACCGGGTGAAGTATTGGCTATCAGTTGGAGCACAGCCATCG GATCCTGTGGAGCGCATCCTCTACCGTGCTGGAATTCTACCTCCACCTCCAATGCTAGCT ATGGCCCACAAGGGTGGGCCTCGCGACAGACGTCCTATTGATCCCATGACTGGGCGCCCC TTAGACCTTGAGGGTGTCACAGTTGTTGATGATTCTCATACTCCCAAGAGTGGTGATGGA GCNCCTAACGAGGAGACAGCATAGATGAGGCATGATGATATATCTGTTTTAGCATATTGT GTGGTTTTGCAAGATTAAAAAGTACTGTTTGTGGCCTTTCTGATGGGTGTTTGAGCCTGT GACTNGTATGTTGTGNNCTTTCTAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13307#0      ----------------------TCGCCTTTTTCTGAGACTCAGAGCGGCGGCGAGCGCCG 38
consensus_13307#3      ------------------------------------------------------------
consensus_13307#1      TGCTCCCACAGGAGTGAACACGACGCGACCCGAGCCGGAGAAGGGGAAGGGAAGGCGGCG 60
consensus_13307#2      ---------------------------------------------------------GCG 3
                                                                                   

consensus_13307#0      GCCGGTCGCCGGCGGAGGAGTTGGTGTGGAGAGGGCGGGGAGATGGTTGTCCGGATCAGG 98
consensus_13307#3      ------------------------------------------------------------
consensus_13307#1      GCGGCGGCGGCGGAGGAGGAGGAGGCGCGAGGGGAGGCGAGCATGGTGGTGCGGATCCGG 120
consensus_13307#2      GCGGCGGCGGCGGAGGAGGAGGAGGCGCGAGGGGAGGCGAGCATGGTGGTGCGGATCCGG 63
                                                                                   

consensus_13307#0      CTGGCGCGGTTCGGCTGCCGGAACAGGCCCTTCTACCGGCTCATGGCCGCCGACAGCCGC 158
consensus_13307#3      ------------------------------------------------------------
consensus_13307#1      CTGGCGCGGTTCGGCTGCCGGAACCGGCCGTTCTACCGGGTGATGGCCGCCGACAGCCGC 180
consensus_13307#2      CTGGCGCGGTTCGGCTGCCGGAACCGGCCGTTCTACCGGGTGATGGCCGCCGACAGCCGC 123
                                                                                   

consensus_13307#0      TCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCT-ACTACGACCCGCTCCCCGGGAA 217
consensus_13307#3      -------------GCAAGCACCTCGAGGTCCTCGGCTTACTACGACCCGCTCCCCGGGAA 47
consensus_13307#1      TCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCT-ACTACAACCCGCTCCCCGGGAA 239
consensus_13307#2      TCCCCGCGCGACGGCAAGCACCTCGAGGTCCTCGGCT-ACTACAACCCGCTCCCCGGGAA 182
                                    ************************ ***** ****************

consensus_13307#0      GGATGGTGGCAAGAGAATGGGGTTAAAATTCGACCGGGTGAAGTATTGGCTATCAGTTGG 277
consensus_13307#3      GGATGGTGGCAAGAGAATGGGGTTAAAATTCGACCGGGTGAAGTATTGGCTATCAGTTGG 107
consensus_13307#1      GGATGGTGGCAAGAGGATGGGGCTGAAATTCGACAGGGTCAAGTACTGGCTGTCTGTTGG 299
consensus_13307#2      GNATGGTGGCAAGAGGATGGGGCTGAAATTCGACAGGGTCAAGTACTGGCTGTCTGTTGG 242
                       * ************* ****** * ********* **** ***** ***** ** *****

consensus_13307#0      AGCACAGCCATCGGATCCTGTGGAGCGCATCCTCTACCGTGCTGGAATTCTACCTCCACC 337
consensus_13307#3      AGCACAGCCATCGGATCCTGTGGAGCGCATCCTCTACCGTGCTGGAATTCTACCTCCACC 167
consensus_13307#1      TGCTCAGCCATCAGATCCTGTGCAGCG-ATCCTTTTTCGAGCTGGGCTTCTGC-TCCACC 357
consensus_13307#2      TGCTCAGCCATCAGATCCTGTGCAGCGCATCCTTTTTCGAGCTGGGCTTCTGCCTCCACC 302
                        ** ******** ********* **** ***** *  ** *****  **** * ******

consensus_13307#0      TCCAATGCTAGCTATGGCCCACAAGGGT-GGGCCTCGCGAC-AGACGTCCTATT-GATCC 394
consensus_13307#3      TCCAATGCTAGCTATGGCCCACAAGGGT-GGGCCTCGCGAC-AGACGTCCTATT-GATCC 224
consensus_13307#1      TCCAATGCTAGCTATGGCTCGAAAGGGT-GGACCTCGTGAT-AGGCGCCCAATT-CATCC 414
consensus_13307#2      TCCAATGCTAGCTATGGCTCGAAAGGGNTGGACCTCGTGATTAGGCGGCNATNNGTGTNC 362
                       ****************** *  *****  ** ***** **  ** ** *        * *

consensus_13307#0      CATGACTGGGCGCCCCTTAGACC-TTGAGGGTGTCACAGTTGTTGATGATT-CTCATACT 452
consensus_13307#3      CATGACTGGGCGCCCCTTAGACC-TTGAGGGTGTCACAGTTGTTGATGATT-CTCATACT 282
consensus_13307#1      GATGACTGGGCGCCCCTTGGATC-TTGAGGGTGTCACGGTTGTTGATGACT-CCAATGTT 472
consensus_13307#2      GNAGNGGGNANTNTCNGTGGNNAATTGGNAATGTTTTNNGGNATTGTGCCNGTNANTNCN 422
                          *   *      *  * *    ***    ***         *  **        *   

consensus_13307#0      CCCAAGAGTGGTGATGGAGCACCT---AACGAGGAGACAGCATAGATGAGGCATGATGAT 509
consensus_13307#3      CCCAAGAGTGGTGATGGAGCNCCT---AACGAGGAGACAGCATAGATGAGGCATGATGAT 339
consensus_13307#1      CCCGAAGGTGGTGCTGAGGAACCTGTGTCAGAGGAGTGATGCTGCAGTAGGTCTCCACTT 532
consensus_13307#2      NAANNTTGNGNNGATNNGGAATNNCGGNGNGNNCNGGNNNNNTATNTGGGGNCNNCTTT- 481
                              * *  * *   *           *    *      *      **         

consensus_13307#0      ATATCTG-----TTTTAGCATATTGTGTG-GTTTTGCAAGATTAAAAAGTACTGTTTGTG 563
consensus_13307#3      ATATCTG-----TTTTAGCATATTGTGTG-GTTTTGCAAGATTAAAAAGTACTGTTTGTG 393
consensus_13307#1      GTTTGTTGTGCCTCTGATAAGATCATGAGTACTGTACAATATGGAAACTTCCTAATCATG 592
consensus_13307#2      ------------------------------------------------------------
                                                                                   

consensus_13307#0      GCCTTTCTGATGGGTGTTTGAGCCTGTGACTAGTATGTTGTGACCTTTCTTGCTGACCGG 623
consensus_13307#3      GCCTTTCTGATGGGTGTTTGAGCCTGTGACTNGTATGTTGTGNNCTTTCTAAAAAAAAAA 453
consensus_13307#1      TAATCTTCCATTGTTTTCTAATAATTT-ACAAGGTCGTAGTGCTGCACTAAAAGTTAAAA 651
consensus_13307#2      ------------------------------------------------------------
                                                                                   

consensus_13307#0      CTTTATTGATCTATGCTCCTGTCATCTATTCTCAGGAACACGAACCTGGAAACATGAGTT 683
consensus_13307#3      AAAAAAA----------------------------------------------------- 460
consensus_13307#1      AAAAAAAAAAAAA----------------------------------------------- 664
consensus_13307#2      ------------------------------------------------------------
                                                                                   

consensus_13307#0      GTTCTTTTTGATAAAATTTGTATGTTGTGTTCCAAAAAAAAA 725
consensus_13307#3      ------------------------------------------
consensus_13307#1      ------------------------------------------
consensus_13307#2      ------------------------------------------
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)