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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13311#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1447 fasta sequence
[CCTCTTCCTCCATTCGATTCTTCCCACCACACCACTCCCTCCGCCCCTCCGCATCGCTTCCTCCGCCGCCACCCCCATGGCCACCACCACCACCACCTCCTCCTCCTCCTCCAATTCCCAAAACCCTAACCCCTTCAACCTCCCGCCATGGCTCCGCAGCCTCCGCTGCCCCTTCACCTTCCTCTGCCCGCCCCCACCGCCCCCGCCGCCCCCTCCTCCTCCGCCGCCGCCGCCGCCTCCCCCGCTGGAGGTGGTGTCGCCGTCCCCGCGGTGGAGGCGGCCGGGGCTGAGGGTGACCACGGAGTACGACAGCGAGGAGGCCATGTTCGCGCACAAGGTGTCGTGCAAGGTCGCGGGCGGGCTCGCCAAGCTGCGGCTGTCGTTCCAGAGCGACCCGTCGGGGCAGGGGTTGGGGGAGGAGGGCGACCCGCGGCGGCAGCTATTCGTCGCGCCCGTGGTCGGGCTCATCGCCAAGAATTTCTCCGTGCTGTACGACGTCGAGGCCCGCAACGCGCTGCTCAGCGGGCAGGGCTCCCTCCCCGGCGGCGCCATCCAGCTCCGCGGCTCACACGATGTCAAGGAGCGACAAGGAGAAGTCTCAGTGATCACTAGGCTGGGTGATCCGTCTTATAAACTTGAGCTATCATCCTTGGTGCCTTACAATGGTCTGCCGAGAGCAACCCTCCACTTTCCTATTGGTCAAGTGTCAGTTGAAGAGAGGAGAAACGAAGCGGATGAGAAAATGTTATCCCTTTATGGAATTGCAAAATCTAATTTCTTGGATGGCATTCTTACTGCCCAGTACAGTGAAAACGATATTAATCTGAGATATTGTTATAAGGACAATGAACTAACTTTAATTCCCAGCGTGTCCCTGCCTTCCAATGCTGTATCCTTAGGCTTCAAAAGGCGGTTTGGTCCTTCTGATAAGTTGAGCTATCGTTATGACTTTACCACTGATGACTGGAATGCTGTTTATAAGCGCACAGTTGGTAAAGATTTCAAAGTGAAAGCTGGTTATGATTCTGAGGTGCGAGTTGGATGGGCTTCAGTTTGGGTGGGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGACGAAACTTCAGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGATTTGGCCAACATTTTGTTGTAAGCTGCGTAGGATGGCT-TGAAAAAAAAAATCCATGAAGCCTTTCCAATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATCGTTCGTTCCGCACATAAGCAATTTGATTTCCATGTAAGATTGTTCACCCCTTTACTCGAAGTTCTGGGCTAACTTTTCCGGAGTGCTATCGG]
[+] EMBL AK068690 [CCTCTTCCTCCATTCGATTCTTCCCACCACACCACTCCCTCCGCCCCTCCGCATCGCTTCCTCCGCCGCCACCCCCATGGCCACCACCACCACCACCTCCTCCTCCTCCTCCAATTCCCAAAACCCTAACCCCTTCAACCTCCCGCCATGGCTCCGCAGCCTCCGCTGCCCCTTCACCTTCCTCTGCCCGCCCCCACCGCCCCCGCCGCCCCCTCCTCCTCCGCCGCCGCCGCCGCCTCCCCCGCTGGAGGTGGTGTCGCCGTCCCCGCGGTGGAGGCGGCCGGGGCTGAGGGTGACCACGGAGTACGACAGCGAGGAGGCCATGTTCGCGCACAAGGTGTCGTGCAAGGTCGCGGGCGGGCTCGCCAAGCTGCGGCTGTCGTTCCAGAGCGACCCGTCGGGGCAGGGGTTGGGGGAGGAGGGCGACCCGCGGCGGCAGCTATTCGTCGCGCCCGTGGTCGGGCTCATCGCCAAGAATTTCTCCGTGCTGTACGACGTCGAGGCCCGCAACGCGCTGCTCAGCGGGCAGGGCTCCCTCCCCGGCGGCGCCATCCAGCTCCGCGGCTCACACGATGTCAAGGAGCGACAAGGAGAAGTCTCAGTGATCACTAGGCTGGGTGATCCGTCTTATAAACTTGAGCTATCATCCTTGGTGCCTTACAATGGTCTGCCGAGAGCAACCCTCCACTTTCCTATTGGTCAAGTGTCAGTTGAAGAGAGGAGAAACGAAGCGGATGAGAAAATGTTATCCCTTTATGGAATTGCAAAATCTAATTTCTTGGATGGCATTCTTACTGCCCAGTACAGTGAAAACGATATTAATCTGAGATATTGTTATAAGGACAATGAACTAACTTTAATTCCCAGCGTGTCCCTGCCTTCCAATGCTGTATCCTTAGGCTTCAAAAGGCGGTTTGGTCCTTCTGATAAGTTGAGCTATCGTTATGACTTTACCACTGATGACTGGAATGCTGTTTATAAGCGCACAGTTGGTAAAGATTTCAAAGTGAAAGCTGGTTATGATTCTGAGGTGCGAGTTGGATGGGCTTCAGTTTGGGTGGGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGACGAAACTTCAGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGATTTGGCCAACATTTTGTTGTAAGCTGCGTAGGATGGCT TGAAAAAAAAAATCCATGAAGCCTTTCCAATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATCGTTCGTTCCGCACATAAGCAATTTG ]
[+] EMBL CB680128 [ CCACCACACCACTCCCTCCGCCCCTCCGCATCGCTTCCTCCGCCGCCACCCCCATGGCCACCACCACCACCACCTCCTCCTCCTCCTCCAATTCCCAAAACCCTAACCCCTTCAACCTCCCGCCATGGCTCCGCAGCCTCCGCTGCCCCTTCACCTTCCTCTGCCCGCCCCCACCGCCCCCGCCGCCCCCTCCTCCTCCGCCGCCGCCGCCGCCTCCCCCGCTGGAGGTGGTGTCGCCGTCCCCGCGGTGGAGGCGGCCGGGGCTGAGGGTGACCACGGAGTACGACAGCGAGGAGGCCATGTTCGCGCACAAGGTGTCGTGCAAGGTCGCGGGCGGGCTCGCCAAGCTGCGGCTGTCGTTCCAGAGCGACCCGTCGGGGCAGGGGTTGGGGGAGGAGGGCGACCCGCGGCGGCAGCTATTCGTCGCGCCCGTGGTCGGGCTCATCGCCAAGAATTTCTCCGTGCTGTACGACGTCGAGGCCCGCAACGCGCTGCTCAGCGGGCAGGGCTCCCTCCCCGGCGGCGCCATCCAGCTCCGCGGCTCACACGATGTCAAGGAGCGACAAGGAGAAGTCTCAGTGATCACTAGGCTGGGTGATCCGTCTTATAAACTTGAGCTATCATCCTTGGTGCCTTACAATGGTCTGCCGAGAGCAACCCTCCACTTTCCTATTGGTCAAGTGTCAGTTGAAGAGAGGAGACACGAAGCGGATGAGAAAATGTTATCCCTTTATGGAATTGCAAAATCTAATTTCTTG ]
[+] EMBL AK105867 [ CTCCCTCCGCCCCTCCGCATCGCTTCCTCCGCCGCCACCCCCATGGCCACCGCCACCACCACCTCCTCCTCCTCCTCCAATTCCCAAAACCCTAACCCCTTCAACCTCCCGCCATGGCTCCGCAGCCTCCGCTGCCCCTTCACCTTCCTCTGCCCGCCCCCACCGCCCCCGCCGCCCCCTCCTCCTCCGCCGCCGCCGCCGCCTCCCCCGCTGGAGGTGGTGTCGCCGTCCCCGCGGTGGAGGCGGCCGGGGCTGAGGGTGACCACGGAGTACGACAGCGAGGAGGCCATGTTCGCGCACAAGGTGTCGTGCAAGGTCGCGGGCGGGCTCGCCAAGCTGCGGCTGTCGTTCCAGAGCGACCCGTCGGGGCAGGGGTTGGGGGAGGAGGGCGACCCGCGGCGGCAGCTATTCGTCGCGCCCGTGGTCGGGCTCATCGCCAAGAATTTCTCCGTGCTGTACGACGTCGAGGCCCGCAACGCGCTGCTCAGCGGGCAGGGCTCCCTCCCCGGCGGCGCCATCCAGCTCCGCGGCTCACACGATGTCAAGGAGCGACAAGGAGAAGTCTCAGTGATCACTAGGCTGGGTGATCCGTCTTATAAACTTGAGCTATCATCCTTGGTGCCTTACAATGGTCTGCCGAGAGCAACCCTCCACTTTCCTATTGGTCAAGTGTCAGTTGAAGAGAGGAGAAACGAAGCGGATGAGAAAATGTTATCCCTTTATGGAATTGCAAAATCTAATTTCTTGGATGGCATTCTTACTGCCCAGTACAGTGAAAACGATATTAATCTGAGATATTGTTATAAGGACAATGAACTAACTTTAATTCCCAGCGTGTCCCTGCCTTCCAATGCTGTATCCTTAGGCTTCAAAAGGCGGTTTGGTCCTTCTGATAAGTTGAGCTATCGTTATGACTTTACCACTGATGACTGGAATGCTGTTTATAAGCGCACAGTTGGTAAAGATTTCAAAGTGAAAGCTGGTTATGATTCTGAGGTGCGAGTTGGATGGGCTTCAGTTTGGGTGGGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGACGAAACTTCAGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGATTTGGCCAACATTTTGTTGTAAGCTGCGTAGGATGGCT TGAAAAAAAAAATCCATGAAGCCTTTCCAATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATCGTTCGTTCCGCACATAAGCAATTTGATTTCCATGTAAGATTGTTCACCCCTTTACTCGAAGTTCTGGGCTAACTTTTCCGGAGTGCTATCGG]
[+] EMBL CB681272 [ GGCCCCCTACGCGCTGCTCAGCGGGCAGGGCTCCCTCCCCGGCGGCGCCATCCAGCTCCGCGGCTCACACGATGTCAAGGAGCGACAAGGAGAAGTCTCAGTGATCACTACGCTGGGTGATCCGTCTTATAAACTTGAGCTATCATCCTTGGTGCCTTACAATGGTCTGCCGAGAGCAACCCTCCACTTTCCTATTGGTCAAGTGTCAGTTGAAGAGAGGAGAAACGAAGCGGATGAGAAAATGTTATCCCTTTATGGAATTGCAAAATCTAATTTCTTGGATGGCATTCTTACTGCCCAGTACAGTGAAAACGATATTAATCTGAGATATTGTTATAAGGACAATGAACTAACTTTAATTCCCAGCGTGTCCCTGCCTTCCAATGCTGTATCCTTAGGCTTCAAAAGGCGGTTTGGTCCTTCTGATAAGTTGAGCTATCGATATGACTTTACCACTGATGACTGGAATGCTGTTTATAAGCGCACAGATGGTAAAGATTTCAAAGTGAAAGCTGGTTATGATTCTGAGGTGCGAGATGGATGGGCTTCAGTTTGGGTGGGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGACGAAACTTCGGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCAGTT ]
[+] EMBL CA767253 [ GTGATCCCTAGGCTGGGTGATCCGTCTTATAAACTTGAGCTATCATCCTTGGTGCCTTACAATGGTCTGCCGAGAGCAACCCTCCACTTTCCTATTGGTCAAGTGTCAGTTGAAGAGAGGAGAAACGAAGCGGATGAGAAAATGTTATCCCTTTATGGAATTGCAAAATCTGATTTCTTGGATGGCATTCTTACTGCCCAGTACAGTGAAAACGATATTAATCTGAGATATTGTTATAAGGACAATGAACTAACTTTAATTCCCAGCGTGTCCCTGCCTTCCAATGCTGTATCCTTAGGCTTCAAAAGGCGGTTTGGTCCTTCTGATAAGTTGAGCTATCGTTATGACTTTACCACTGATGACTGGAATGCTGTTTATAAGCGCACAGTTGGTAAAGATTTCAAAGTGAAAGCTGGTTATGATTCTGAGGTGCGAGTTGGATGGGCTTCAGTTTGGGTGGGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGACGAAACTTCAGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGATTTGGCCAACATTTTGNTGTAAGCTGCATAGGATGGCT TGAAAAAAAAA CCATGAAGCCTTTCC ]
[-] EMBL CB680129 [ TAGGCTGGGTGATCCGTCTTATAAACTGNAGCTATCATCCTTGGTGCCTTACAATGGTCTGCCGAGAGCAACCCTCCACTTTCCTATTGGTCAAGTGTCAGTTGAAGAGAGGAGAAACGAAGCGGATGAGAAAATGTTATCCCTTTATGGAATTGCAAAATCTAATTTCTTGGATGGCATTCTTACTGCCCAGTACAGTGAAAACGATATTAATCTGAGATATTGTTATAAGGACAATGAACTAACTTTAATTCCCAGCGTGTCCCTGCCTTCCAATGCTGTATCCTTAGGCTTCAAAAGGCGGTTTGGTCCTTCTGATAAGTTGAGCTATCGTTATGACTTTACCACTGATGACTGGAATGCTGTTTATAAGCGCACAGTTGGTAAAGATTTCAAAGTGAAAGCTGGTTATGATTCTGAGGTGCGAGTTGGATGGGCTTCAGTTTGGGTGGGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGACGAAACTTCAGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGATTTGGCCAACATTTTGTTGTAAGCTGCGTAGGATGGCTGTGAAAAAAAAAATCCATGAAGCCTTTCCAATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATAGTTGGTTCCGCACATAAGCAATTTGATTTCCATGT ]
[-] EMBL CB681273 [ GCTATCATCCTTGGTGCCTTACAATGGTCTGCCGAGAGCAACCCTCCACTTTCCTATTGGTCAAGTGTCAGTTGAAGAGAGGAGAAACGAAGCGGATGAGAAAATGTTATCCCTTTATGGAATTGCAAAATCTAATTTCTTGGATGGCATTCTTACTGCCCAGTACAGTGAAAACGATATTAATCTGAGATATTGTTATAAGGACAATGAACTAACTTTAATTCCCAGCGTGTCCCTGCCTTCCAATGCTGTATCCTTAGGCTTCAAAAGGCGGTTTGGTCCTTCTGATAAGTTGAGCTATCGTTATGACTTTACCACTGATGACTGGAATGCTGTTTATAAGCGCACAGTTGGTAAAGATTTCAAAGTGAAAGCTGGTTATGATTCTGAGGTGCGAGTTGGATGGGCTTCAGTTTGGGTGGGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGACGAAACTTCAGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGATTTGGCCAACATTTTGTTGTAAGCTGCGTAGGATGGCT TGAAAAAAAAAATCCATGAAGCCTTTCCAATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATGGTTCGTTCCGCACATAAGCAATTTGATTTCCAaaaaaaaga ]
[+] EMBL AA750867 [ AAGACCGCACCAATGAAGACGAAACTTCAGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACT GGGATTTGGCCAACATTTTG ]
[-] EMBL D42408 [ ACCAATGAA AC AAACTTCAGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGGTCGTTAGCATAT CTACA TATATACTCCATTTGTAT GGGATACCAGTATTGGGTACTC GGATTTGGCCAACATTTTGTTGTAAGCTGCGTAGGATGGCT T NAAAAAATCCATNAAGNCTTTCCAATTCTCATCATGTAATTCTGCCTNCTG ]
consensusID : consensus_13311#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 683 fasta sequence
[GGGAATGGCAAAATCTGATTTCTTGGAGGACATTCCTACTGCCCAGTACAGTGAAGACGATATTAATCTGAGATANTGTTATAAGGACAATGACCTAACTTTAGTTCCCAGCGTGTCCCTGCCTTCCATTGCTGTATCCTTAGGCTTCAAAAGGCGGGTTGGTCCTTCTGATAAGTTGAGCTATCGTTATGGCTTTACCACTGATGGCTGGAATGCTGTTTATAAGCGCACAGTTGGTAAAGATTTCAAAGTGAAACCTGGTTATGATTCTGAGGTGCGAGTTGGATGGGCTTCAGTTTGGGTGGCGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGGCGAAACTTCAGCTCATGCTTCAAGTTCCTCAGGCCAATTTCCGCAATTCCACCTTCCTGTTCCGTGTGAAAAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCCTTTGTATGGGGATACCAGTATTGGGTACTCGGAATTTGGCCAACATTTTGTTGTAAGCTGCGTAGGATGGCTTGAAAAAAAAAATCCATGAAGCCTTTCCAATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATCGTTCGTTCCGCACATAAGCAATTTGATTTCCATGTAAGATTGTTCACCCCTTTACTCGAAGTTCTGGGCTAAAAAAAAAAAAA]
[-] EMBL CA762589 [GGGAATGGCAAAATCTGATTTCTTGGAGGACATTCCTACTGCCCAGTACAGTGAAGACGATATTAATCTGAGATANTGTTATAAGGACAATGACCTAACTTTAGTTCCCAGCGTGTCCCTGCCTTCCATTGCTGTATCCTTAGGCTTCAAAAGGCGGGTTGGTCCTTCTGATAAGTTGAGCTATCGTTATGGCTTTACCACTGATGGCTGGAATGCTGTTTATAAGCGCACAGTTGGTAAAGATTTCAAAGTGAAACCTGGTTATGATTCTGAGGTGCGAGTTGGATGGGCTTCAGTTTGGGTGGCGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGGCGAAACTTCAGCTCATGCTTCAAGTTCCTCAGGCCAATTTCCGCAATTCCACCTTCCTGTTCCGTGTGAAAAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCCTTTGTATGGGGATACCAGTATTGGGTACTCGGAATTTGGCCAACATTTTGTTGTAAGCTGCGTAGGATGGCTTGAAAAAAAAAATCCATGAAGCCTTTCCAATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATCGTTCGTTCCGCACATAAGCAATTTGATTTCCATGTAAGATTGTTCACCCCTTTACTCGAAGTTCTGGGCTAAAAAAAAAAAAA]
consensusID : consensus_13311#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence
[GCATCATTAGACGATTTGTCCATGGAAGCTAATATTGCCTTCTCATGGCTCAAGTGTACTGTACTTTTATGAGCAATTCGTGAGTTTCGTTTTCTTGGATGCTAGGTGGGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGACGAGAACTTCAGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGATTTGGCCAACATTTTGTTGTAAGCTGCGTAGGATGGCTTGAAAAAAAAATCCATGAAGCCTTTCCAATTCTCATCATGTAATTCTTCCTGCTGTACATAACGGCCATCGTTCGTTCCGCACATAAGCATTTGATTTCCATGTAAGATTGTTCACCCCTTTAAAAAAAAAA]
[+] EMBL BM419574 [GCATCATTAGACGATTTGTCCATGGAAGCTAATATTGCCTTCTCATGGCTCAAGTGTACTGTACTTTTATGAGCAATTCGTGAGTTTCGTTTTCTTGGATGCTAGGTGGGTCAAGAAGACGGCAAGGCAAAGACCGCACCAATGAAGACGAGAACTTCAGCTCATGCTTCAAGTTCCTCAGGACAATTTCCGCAATCCCACCTTCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGATTTGGCCAACATTTTGTTGTAAGCTGCGTAGGATGGCTTGAAAAAAAAATCCATGAAGCCTTTCCAATTCTCATCATGTAATTCTTCCTGCTGTACATAACGGCCATCGTTCGTTCCGCACATAAGCATTTGATTTCCATGTAAGATTGTTCACCCCTTTAAAAAAAAAA]
consensusID : consensus_13311#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 262 fasta sequence
[ATNTCNNATGTATCNTGTACCGTGTGAAGAAAAGATGGGATCTGTAACATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGGATTTGGCCAACATTTTGTTGTAAGCTGCGTAAGATGGCTTGAAAAAAAAAATCCATGAAAGCCTTTCCAATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATCCGTTCGTTCCGCACATAAGCAATTTGATTCCCATGNTAAGANTGTTC]
[+] EMBL BE228489 [ATNTCNNATGTATCNTGTACCGTGTGAAGAAAAGATGGGATCTGTAACATATGCTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGGATTTGGCCAACATTTTGTTGTAAGCTGCGTAAGATGGCTTGAAAAAAAAAATCCATGAAAGCCTTTCCAATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATCCGTTCGTTCCGCACATAAGCAATTTGATTCCCATGNTAAGANTGTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 CCTCTTCCTCCATTCGATTCTTCCCACCACACCACTCCCTCCGCCCCTCCGCATCGCTTC 60
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 CTCCGCCGCCACCCCCATGGCCACCACCACCACCACCTCCTCCTCCTCCTCCAATTCCCA 120
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 AAACCCTAACCCCTTCAACCTCCCGCCATGGCTCCGCAGCCTCCGCTGCCCCTTCACCTT 180
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 CCTCTGCCCGCCCCCACCGCCCCCGCCGCCCCCTCCTCCTCCGCCGCCGCCGCCGCCTCC 240
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 CCCGCTGGAGGTGGTGTCGCCGTCCCCGCGGTGGAGGCGGCCGGGGCTGAGGGTGACCAC 300
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 GGAGTACGACAGCGAGGAGGCCATGTTCGCGCACAAGGTGTCGTGCAAGGTCGCGGGCGG 360
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 GCTCGCCAAGCTGCGGCTGTCGTTCCAGAGCGACCCGTCGGGGCAGGGGTTGGGGGAGGA 420
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 GGGCGACCCGCGGCGGCAGCTATTCGTCGCGCCCGTGGTCGGGCTCATCGCCAAGAATTT 480
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 CTCCGTGCTGTACGACGTCGAGGCCCGCAACGCGCTGCTCAGCGGGCAGGGCTCCCTCCC 540
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 CGGCGGCGCCATCCAGCTCCGCGGCTCACACGATGTCAAGGAGCGACAAGGAGAAGTCTC 600
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 AGTGATCACTAGGCTGGGTGATCCGTCTTATAAACTTGAGCTATCATCCTTGGTGCCTTA 660
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 CAATGGTCTGCCGAGAGCAACCCTCCACTTTCCTATTGGTCAAGTGTCAGTTGAAGAGAG 720
consensus_13311#1 ------------------------------------------------------------
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 GAGAAACGAAGCGGATGAGAAAATGTTATCCCTTTATGGAATTGCAAAATCTAATTTCTT 780
consensus_13311#1 ------------------------------------GGGAATGGCAAAATCTGATTTCTT 24
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 GGATGGCATTCTTACTGCCCAGTACAGTGAAAACGATATTAATCTGAGATATTGTTATAA 840
consensus_13311#1 GGAGGACATTCCTACTGCCCAGTACAGTGAAGACGATATTAATCTGAGATANTGTTATAA 84
consensus_13311#2 ------------------------------------------------------------
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 GGACAATGAACTAACTTTAATTCCCAGCGTGTCCCTGCCTTCCAATGCTGTATCCTTAGG 900
consensus_13311#1 GGACAATGACCTAACTTTAGTTCCCAGCGTGTCCCTGCCTTCCATTGCTGTATCCTTAGG 144
consensus_13311#2 ------------------------------------GCATCATTAGACGATTTGTCCATG 24
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 CTTCAAAAGGCGGTTTGGTCCTTCTGATAAGTTGAGCTATCGTT--ATGACTTTACCACT 958
consensus_13311#1 CTTCAAAAGGCGGGTTGGTCCTTCTGATAAGTTGAGCTATCGTT--ATGGCTTTACCACT 202
consensus_13311#2 GAAGCTAATATTGCCTTCTCATGGCTCAAGTGTACTGTACTTTTATGAGCAATTCGTGAG 84
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 GATGACTGGAATGCTGTTTATAAGCGCACAGTTGGTAAAGATTTCAAAGTGAAAGCTGGT 1018
consensus_13311#1 GATGGCTGGAATGCTGTTTATAAGCGCACAGTTGGTAAAGATTTCAAAGTGAAACCTGGT 262
consensus_13311#2 TTTCGTTTTC---------TTGGATG---------CTAGGTGG-GTCAAGAAGACGGCAA 125
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 TATGATTCTGAGGTGCGAGTTGGATGGGCTTCAGTTTGGGTGG-GTCAAGAAGACGGCAA 1077
consensus_13311#1 TATGATTCTGAGGTGCGAGTTGGATGGGCTTCAGTTTGGGTGGCGTCAAGAAGACGGCAA 322
consensus_13311#2 GGCAAAGACCGCACCAATGAAGACGAGAACTTCAGCTCATGCTTCAAGTTCCTCAGGACA 185
consensus_13311#3 ------------------------------------------------------------
consensus_13311#0 GGCAAAGACCGCACCAATGAAGACGA-AACTTCAGCTCATGCTTCAAGTTCCTCAGGACA 1136
consensus_13311#1 GGCAAAGACCGCACCAATGAAGGCGA-AACTTCAGCTCATGCTTCAAGTTCCTCAGGCCA 381
consensus_13311#2 ATTTCCGCAATCCCACCT-TCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATG 244
consensus_13311#3 -------ATNTCNNATGTATCNTGTACCGTGTGAAGAAAAGATGGGATCTGTAACATATG 53
consensus_13311#0 ATTTCCGCAATCCCACCT-TCCTGTTCCGTGTGAAGAAAAGATGGGATCTGTAGCATATG 1195
consensus_13311#1 ATTTCCGCAATTCCACCT-TCCTGTTCCGTGTGAAAAAAAGATGGGATCTGTAGCATATG 440
* * * ** *** ********* ***************** ******
consensus_13311#2 CTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGG-ATTTGGCCA 303
consensus_13311#3 CTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGGGATTTGGCCA 113
consensus_13311#0 CTACATTATATACTCCATTTGTATGGGGATACCAGTATTGGGTACTCGGG-ATTTGGCCA 1254
consensus_13311#1 CTACATTATATACTCCCTTTGTATGGGGATACCAGTATTGGGTACTCGGA-ATTTGGCCA 499
**************** ******************************** *********
consensus_13311#2 ACATTTTGTTGTAAGCTGCGTAGGATGGCTTGAAAAAAAAA-TCCATGAA-GCCTTTCCA 361
consensus_13311#3 ACATTTTGTTGTAAGCTGCGTAAGATGGCTTGAAAAAAAAAATCCATGAAAGCCTTTCCA 173
consensus_13311#0 ACATTTTGTTGTAAGCTGCGTAGGATGGCTTGAAAAAAAAAATCCATGAA-GCCTTTCCA 1313
consensus_13311#1 ACATTTTGTTGTAAGCTGCGTAGGATGGCTTGAAAAAAAAAATCCATGAA-GCCTTTCCA 558
********************** ****************** ******** *********
consensus_13311#2 ATTCTCATCATGTAATTCTTCCTGCTGTACATAACGGCCATC-GTTCGTTCCGCACATAA 420
consensus_13311#3 ATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATCCGTTCGTTCCGCACATAA 233
consensus_13311#0 ATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATC-GTTCGTTCCGCACATAA 1372
consensus_13311#1 ATTCTCATCATGTAATTCTGCCTGCTGTACATAACGGCCATC-GTTCGTTCCGCACATAA 617
******************* ********************** *****************
consensus_13311#2 GCA-TTTGATTTCCATGT-AAGATTGTTCACCCCTTTAAAAAAAAAA------------- 465
consensus_13311#3 GCAATTTGATTCCCATGNTAAGANTGTTC------------------------------- 262
consensus_13311#0 GCAATTTGATTTCCATGT-AAGATTGTTCACCCCTTTACTCGAAGTTCTGGGCTAACTTT 1431
consensus_13311#1 GCAATTTGATTTCCATGT-AAGATTGTTCACCCCTTTACTCGAAGTTCTGGGCTAAAAAA 676
*** ******* ***** **** *****
consensus_13311#2 ----------------
consensus_13311#3 ----------------
consensus_13311#0 TCCGGAGTGCTATCGG 1447
consensus_13311#1 AAAAAAA--------- 683
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||