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Oryza sativa
cluster # 13314 cluster # 13314       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13314#0 length = 1650 sequences # 6  
consensus_13314#1 length = 1540 sequences # 1  
consensus_13314#2 length = 1535 sequences # 3  
consensus_13314#3 length = 484 sequences # 2  

consensusID : consensus_13314#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1650
fasta sequence
                              [CGTCGTCTGGTAGCTTCTTCTCGCGGCTGCGCGATGGAGAGCTGGGTCCGCGCGGTGGTGGAGGCTATCCACTCATCTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGTGAGCATAGGTTCTATGTGTCAACACGAACACAAAATTGCCTCAGGACATCACATGTTACATTGTCAAAGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGGCTGTTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCAATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTTAGAAAA----GGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATTTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCTAAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGCATGGATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTCTTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCACAATGTCACATTATCAGTTGAAAAAAGGACACCGCTGAATTCTTGATAGTGACATACTCAAAAAAAAAAAAGAAAAAAAAAAATAAAAGA]

[+] EMBL AK107426             [CGTCGTCTGGTAGCTTCTTCTCGCGGCTGCGCGATGGAGAGCTGGGTCCGCGCGGTGGTGGAGGCTATCCACTCATCTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGTGAGCATAGGTTCTATGTGTCAACACGAACACAAAATTGCCTCAGGACATCACATGTTACATTGTCAAAGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGGCTGTTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCAATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTTAGAAAA    GGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATTTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCTAAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGCATGGATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTCTTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCACAATGTCACATTATCAGTTGAAAAAAGGACACCGCTGAATTCTTGATAGTGACATACTCAc                             ]
[+] EMBL CB655834             [                              GCGATGGCGAGCTGGGTCCGCGCGGTGGTGGAGGCTATCCACTCATCTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGTGAGCATAGGTTCTATGTGTCAACACGAACACAAAATTGCCTCAGGACATCACATGTTACATTGTCAAAGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGGCTGTTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCAATCAATGCCGACAANCCTCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF310841             [                                                                          ATCTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATGGCCTCCATGGCGCAGCTGTTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGTGAGCATAGGTTCTATGTGTCAACACGAACACAAAATTGCCTCAGGACATCACATGTTACATTGTCAAAGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAACATAATTCTACCTGGTTCATTCAATCCCCTGCATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB661122             [                                                                               GCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGTGAGCATAGGTTCTATGTGTCAACACGAACACAAAATTGCCTCAGGACATCACATGTTACATTGTCAAAGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGGCTGTTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCAATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTTAGAAAAGTAGGGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATTTCCAGGCAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB655835             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTTGTTAATCCTAAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATTTTTATACCAGAGGAGAAGTTTCGCATGGATATTTCTTTTCCAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTTTTTTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTTTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGGGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTTTGTATTTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGAGGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCCCAATGTCCCATTATCAGTTGAAAAAAGGACCCCGCTGAATTTTTGATGGTGCCAAAAAAAAAAAAAAAAAAGAAAAAAAAAAATAAAAGA]
[+] EMBL AU162179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGGAGATGTAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCACAATGTCACATTATCAGTTGAAAAAAGGACACCGCTGAATTCTTGATAGTGACATACTCAAAAAAAAAAAAAAAAA              ]


>consensus_13314#0 CGTCGTCTGGTAGCTTCTTCTCGCGGCTGCGCGATGGAGAGCTGGGTCCGCGCGGTGGTG GAGGCTATCCACTCATCTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAG GCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTG CCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGC AAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGA CCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAA CATGGTGAGCATAGGTTCTATGTGTCAACACGAACACAAAATTGCCTCAGGACATCACAT GTTACATTGTCAAAGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTT CTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAA GAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAA GTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAAC TTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGG CTGTTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCA ATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTT AGAAAAGGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTAT TTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCTAAGT ATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTA CAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGG ACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGCATGG ATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTC TTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGATTAC TAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTT CAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGC CCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAA AAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTT GTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCA CAATGTCACATTATCAGTTGAAAAAAGGACACCGCTGAATTCTTGATAGTGACATACTCA AAAAAAAAAAAGAAAAAAAAAAATAAAAGA



consensusID : consensus_13314#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1540
fasta sequence
                              [GCTTCTTCTCGCGGCTGCGCGATGGAGAGCTGGGTCCGCGCGGTGGTGGAGGCTATCCACTCATCTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGGCTATTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCAATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTTAGAAAAGTAGGGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATTTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCTAAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGCATGGATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTCTTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCACAATGTCACATTATCAGTTGAAAAAAGGACACCGCTGAATTCTTGATAGTGACATACTC]

[+] EMBL AK073675             [GCTTCTTCTCGCGGCTGCGCGATGGAGAGCTGGGTCCGCGCGGTGGTGGAGGCTATCCACTCATCTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGGCTATTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCAATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTTAGAAAAGTAGGGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATTTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCTAAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGCATGGATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTCTTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCACAATGTCACATTATCAGTTGAAAAAAGGACACCGCTGAATTCTTGATAGTGACATACTC]


>consensus_13314#1 GCTTCTTCTCGCGGCTGCGCGATGGAGAGCTGGGTCCGCGCGGTGGTGGAGGCTATCCAC TCATCTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGG CTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATG GCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCA GAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAA GTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGGTTTACG GAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGG CTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAG CGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCAT GAAAGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAAAATAATTCTACC TGGTTCATTCAATCCCCTGCATGATGGACACCTTAGGCTATTAGAAGTTGCATCAAGCAT GTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCAATCAATGCCGACAAACCTCCACT ATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTTAGAAAAGTAGGGAAGAATGTGAT AATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATTTCCAGGCAGTGCATTTGT AATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCTAAGTATTATGGAGGTGATTACAA TAGAATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTACAACATTTCTTGTTGGTGG TCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAG GGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGCATGGATATTTCATCTACAGATAT AAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTCTTCTTATATACTCCCCCCG TCACCCCGTCCTAAAATATAGCAACATGTCTAATCGATTACTAAGTTGCTATATTTTGGA ACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTT CGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCT TTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTTA TCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTT TTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCACAATGTCACATTATCAGTT GAAAAAAGGACACCGCTGAATTCTTGATAGTGACATACTC



consensusID : consensus_13314#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1535
fasta sequence
                              [CTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGTTCTATGTGTCAACACGAACACAAAATTGCCTCAGGACATCACATGTTACATTGTCAAAGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGGCTGTTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCAATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTTAGAAAAGTAGGGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATTTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCTAAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGCATGGATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTCTTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCACAATGTCACATTATGAGTTGAAAAAAGGACACCGCTGAATTCTTGAT-AATAAAAGGA]

[+] EMBL CB666335             [CTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGTTCTATGTGTCAACACGAACACAAAATTGCCTCAGGACATCACATGTTACATTGTCAAAGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGGCTGTTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCAATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTTAGAAAAGTAGGGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB661123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTTAGAAAAGTAGGGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATTTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCTAAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGCATGGATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTCTTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCACAATGTCACATTATGAGTTGAAAAAAGGACACCGCTGAATTCTTGAT AATAAAAGGA]
[-] EMBL CB666336             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATTTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCTAAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGCATGGATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTCTTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCACAATGTCACATTATCGGTTGAAAAAAGGACACCGCTGAATTCTTGATAAATAAAAAGA]


>consensus_13314#2 CTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAGGCGCTCGGGTGGCTGC TGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTGCCCTACTCCATGGCCT CCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGCAAGCAGGCCGCAGAGG ACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGACCAGGTCTACAAGTAA TGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAACATGGTTCTATGTGTC AACACGAACACAAAATTGCCTCAGGACATCACATGTTACATTGTCAAAGGGTTTACGGAG CAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTTCTGCTCAAGGCAATTGCAGACGGCTG CAAAGTTCCTGCAACCATTCAGTCAGATGTTCAAGAACCTGAACTTCCAAAAGAAAGCGT GGAACAATTTGATGAAGACCAAGAACTCCAGCAAGTTATTGATGGGCAAGTCTGCATGAA AGTGTATCACTTTTCTGATTCAATGGATAAAAACTTCAACAGGAAAATAATTCTACCTGG TTCATTCAATCCCCTGCATGATGGACACCTTAGGCTGTTAGAAGTTGCATCAAGCATGTG TGATGATGGTCTTCCATGCTTTGAGATATCAGCAATCAATGCCGACAAACCTCCACTATC TATCGCAGAAATCAAGCGCCGGGTTGAGCAATTTAGAAAAGTAGGGAAGAATGTGATAAT ATCTAACCAACCATACTTTTACAAGAAAGCGGAGCTATTTCCAGGCAGTGCATTTGTAAT CGGTGCAGACACTGCAGCTAGGCTTGTTAATCCTAAGTATTATGGAGGTGATTACAATAG AATGCTAGAGATACTTCTCGAATGTAAAAACACAGGTACAACATTTCTTGTTGGTGGTCG AAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGA AATGTTTATCTCTATACCAGAGGAGAAGTTTCGCATGGATATTTCATCTACAGATATAAG AAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTCTTCTTATATACTCCCCCCGTCA CCCCGTCCTAAAATATAGCAACATGTCTAATCGATTACTAAGTTGCTATATTTTGGAACA GGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGT GAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTT CTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTTATCT TTCTCTTTTCTTGGATGATTAGGCAATTATGCCCAGTTGTCCTTTATACTATTCTTTTTT TGTTTGGATGCTTTTCACATGTACCTGTACAGGCTCCACAATGTCACATTATGAGTTGAA AAAAGGACACCGCTGAATTCTTGATAATAAAAGGA



consensusID : consensus_13314#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 484
fasta sequence
                              [AACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATTTTTATACCAGAGGAGAAGTTTCGCATGGATATTTCATTTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTTTTTTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTTTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTC]

[-] EMBL CF303899             [AACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATTTTTATACCAGAGGAGAAGTTTCGCATGGATATTTCATTTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCTGTTTTTTTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTTTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTC]
[-] EMBL CF310842             [                                                                                                                                                                                                                    CCCCGTCCTAAAATATAGCAACATGTCTAATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATGTAAAAAACCTACTTCCCTGTTAAAAAAAAAAAAAAAAAAAA                 ]


>consensus_13314#3 AACACAGGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTT GAAGATTTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATTTTTATACCAGAGGAGAAG TTTCGCATGGATATTTCATTTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAA CATGCTGTTTTTTTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTTT AATCGATTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAA ATTGGTGGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCAT AGGTTTTGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTG GAGATGTAAAAAACCTACTTCCCTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ACTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13314#0      CGTCGTCTGGTAGCTTCTTCTCGCGGCTGCGCGATGGAGAGCTGGGTCCGCGCGGTGGTG 60
consensus_13314#1      ------------GCTTCTTCTCGCGGCTGCGCGATGGAGAGCTGGGTCCGCGCGGTGGTG 48
consensus_13314#2      ------------------------------------------------------------
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      GAGGCTATCCACTCATCTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAG 120
consensus_13314#1      GAGGCTATCCACTCATCTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAG 108
consensus_13314#2      ----------------CTCGCGCCCAGGCCGTCATCTACCTCGCCGGCGGCGCCTCGCAG 44
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      GCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTG 180
consensus_13314#1      GCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTG 168
consensus_13314#2      GCGCTCGGGTGGCTGCTGTCCGTGCCCGGCGCGTCCGGCACCGTCCTCGAGGTCGTCGTG 104
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      CCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGC 240
consensus_13314#1      CCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGC 228
consensus_13314#2      CCCTACTCCATGGCCTCCATGGCGCAGCTGCTCGGCAAGATGCCCTTGCAGTTCACCAGC 164
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      AAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGA 300
consensus_13314#1      AAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGA 288
consensus_13314#2      AAGCAGGCCGCAGAGGACATGGCATTGGCCGCGTTCAACCGCGCCCTCAAGCTTTCTGGA 224
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      CCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAA 360
consensus_13314#1      CCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAA 348
consensus_13314#2      CCAGGTCTACAAGTAATGGGTGTTGGCTTCACTGGGTCACTGGCTAGCTCACGTCCAAAA 284
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      CATGGTGAGCATAGGTTCTATGTGTCAACACGAACACAAAATTGCCTCAGGACATCACAT 420
consensus_13314#1      CATGG------------------------------------------------------- 353
consensus_13314#2      CATGGT----------TCTATGTGTCAACACGAACACAAAATTGCCTCAGGACATCACAT 334
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      GTTACATTGTCAAAGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTT 480
consensus_13314#1      ----------------GTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTT 397
consensus_13314#2      GTTACATTGTCAAAGGGTTTACGGAGCAGAGAGGAAGAAGATAAAGTTTCAAGCTACTTT 394
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      CTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAA 540
consensus_13314#1      CTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAA 457
consensus_13314#2      CTGCTCAAGGCAATTGCAGACGGCTGCAAAGTTCCTGCAACCATTCAGTCAGATGTTCAA 454
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      GAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAA 600
consensus_13314#1      GAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAA 517
consensus_13314#2      GAACCTGAACTTCCAAAAGAAAGCGTGGAACAATTTGATGAAGACCAAGAACTCCAGCAA 514
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      GTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAAC 660
consensus_13314#1      GTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAAC 577
consensus_13314#2      GTTATTGATGGGCAAGTCTGCATGAAAGTGTATCACTTTTCTGATTCAATGGATAAAAAC 574
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      TTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGG 720
consensus_13314#1      TTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGG 637
consensus_13314#2      TTCAACAGGAAAATAATTCTACCTGGTTCATTCAATCCCCTGCATGATGGACACCTTAGG 634
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      CTGTTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCA 780
consensus_13314#1      CTATTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCA 697
consensus_13314#2      CTGTTAGAAGTTGCATCAAGCATGTGTGATGATGGTCTTCCATGCTTTGAGATATCAGCA 694
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      ATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTT 840
consensus_13314#1      ATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTT 757
consensus_13314#2      ATCAATGCCGACAAACCTCCACTATCTATCGCAGAAATCAAGCGCCGGGTTGAGCAATTT 754
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      AGAAAAG----GAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAG 896
consensus_13314#1      AGAAAAGTAGGGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAG 817
consensus_13314#2      AGAAAAGTAGGGAAGAATGTGATAATATCTAACCAACCATACTTTTACAAGAAAGCGGAG 814
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      CTATTTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCT 956
consensus_13314#1      CTATTTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCT 877
consensus_13314#2      CTATTTCCAGGCAGTGCATTTGTAATCGGTGCAGACACTGCAGCTAGGCTTGTTAATCCT 874
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      AAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACA 1016
consensus_13314#1      AAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACA 937
consensus_13314#2      AAGTATTATGGAGGTGATTACAATAGAATGCTAGAGATACTTCTCGAATGTAAAAACACA 934
consensus_13314#3      ------------------------------------------------------AACACA 6
                                                                             ******

consensus_13314#0      GGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGAT 1076
consensus_13314#1      GGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGAT 997
consensus_13314#2      GGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGAT 994
consensus_13314#3      GGTACAACATTTCTTGTTGGTGGTCGAAATATTGAAGGAGTTTTCAAGGTCCTTGAAGAT 66
                       ************************************************************

consensus_13314#0      TTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGC 1136
consensus_13314#1      TTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGC 1057
consensus_13314#2      TTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATCTCTATACCAGAGGAGAAGTTTCGC 1054
consensus_13314#3      TTGGACATTCCAGTCGAGTTAAGGGAAATGTTTATTTTTATACCAGAGGAGAAGTTTCGC 126
                       *********************************** * **********************

consensus_13314#0      ATGGATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCT 1196
consensus_13314#1      ATGGATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCT 1117
consensus_13314#2      ATGGATATTTCATCTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCT 1114
consensus_13314#3      ATGGATATTTCATTTACAGATATAAGAAAAAAACAAGGGCCTTGATGTATCAAACATGCT 186
                       ************* **********************************************

consensus_13314#0      GTTCTTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGA 1256
consensus_13314#1      GTTCTTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGA 1177
consensus_13314#2      GTTCTTCTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTCTAATCGA 1174
consensus_13314#3      GTTTTTTTTATATACTCCCCCCGTCACCCCGTCCTAAAATATAGCAACATGTTTAATCGA 246
                       *** ** ********************************************* *******

consensus_13314#0      TTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGT 1316
consensus_13314#1      TTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGT 1237
consensus_13314#2      TTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGT 1234
consensus_13314#3      TTACTAAGTTGCTATATTTTGGAACAGGGGGAATAGTAGATTCAAAATAAAAAAATTGGT 306
                       ************************************************************

consensus_13314#0      GGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTT 1376
consensus_13314#1      GGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTT 1297
consensus_13314#2      GGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTT 1294
consensus_13314#3      GGTTCAAATTATTGGATGAACTTCGTGAACCGTCATGGCAGTGTGTCATGCCATAGGTTT 366
                       ************************************************************

consensus_13314#0      TGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATG 1436
consensus_13314#1      TGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATG 1357
consensus_13314#2      TGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATG 1354
consensus_13314#3      TGGCCCTACGAATAACAACTTCTTTTCTGTATCTTAGTAAAACAACAGTGGTTGGAGATG 426
                       ************************************************************

consensus_13314#0      TAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCC 1496
consensus_13314#1      TAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCC 1417
consensus_13314#2      TAAAAAACCTACTTCCCTGTTTATCTTTCTCTTTTCTTGGATGATTAGGCAATTATGCCC 1414
consensus_13314#3      TAAAAAACCTACTTCCCTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTC-- 484
                       ********************* *                 *  *  *   **  *  *  

consensus_13314#0      AGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGC 1556
consensus_13314#1      AGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGC 1477
consensus_13314#2      AGTTGTCCTTTATACTATTCTTTTTTTGTTTGGATGCTTTTCACATGTACCTGTACAGGC 1474
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      TCCACAATGTCACATTATCAGTTGAAAAAAGGACACCGCTGAATTCTTGATAGTGACATA 1616
consensus_13314#1      TCCACAATGTCACATTATCAGTTGAAAAAAGGACACCGCTGAATTCTTGATAGTGACATA 1537
consensus_13314#2      TCCACAATGTCACATTATGAGTTGAAAAAAGGACACCGCTGAATTCTTGATAATAAAAGG 1534
consensus_13314#3      ------------------------------------------------------------
                                                                                   

consensus_13314#0      CTCAAAAAAAAAAAAGAAAAAAAAAAATAAAAGA 1650
consensus_13314#1      CTC------------------------------- 1540
consensus_13314#2      A--------------------------------- 1535
consensus_13314#3      ----------------------------------
                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)