These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13343#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 918 fasta sequence [AAGCCATGGATGGATGGCCCTCTATCTGAGTCAGCTGCATCTCATCTGCATTCCTTCCTCGTGGCGATGACGATGGTACGCATCATCGGCCCAAGTCCAGCTCAATCCTCCTCACCAACACCAAGACGACCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAG-----AGGCAAGCCAAAGAAAACTTCCTATTTTGATTGATGCCGAACGGAAGAGGGATGGATTGGACGAGCTTCTCAATTTCGCATCTTATGTTGTATGCTCTGCAAAATTTCCTCAGGCTTGGACAGGAGCCTCATCAACACCGGTTGCTTTGGTGTCCATGCTTTTAAGATTGCCTAATATCAAGTTTATTATTGTAACCCTTGGAGAAAAGGGATGCTTGATGCTTGAAAGAAGCACAACAGATGCTTCTGAGGCAGAGGAAATAGAT] [+] EMBL CB656266 [AAGCCATGGATGGATGGCCCTCTATCTGAGTCAGCTGCATCTCATCTGCATTCCTTCCTCGTGGCGATGACGATGGTACGCATCATCGGCCCAAGTCCAGCTCAATCCTCCTCACCAACACCAAGACGACCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCT CCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAGAGTGCAGGCAAGCCAAAGAAAACTTCCTATTTTGATTGATGCCGAACGGAAGAGGGATGGATTGGACGAGCTTCTCAATTTCGCATCTTATGTTGTATGCTCTGCAAAAT ] [+] EMBL AK067804 [ CTGAGTCAGCTGCATCTCATCTGCATTCCTTCCTCGTGGCGATGACGATGGTACGCATCATCGGCCCAAGTCCAGCTCAATCCTCCTCACCAACACCAAGACGACCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAG AGGCAAGCCAAAGAAAACTTCCTATTTTGATTGATGCCGAACGGAAGAGGGATGGATTGGACGAGCTTCTCAATTTCGCATCTTATGTTGTATGCTCTGCAAAATTTCCTCAGGCTTGGACAGGAGCCTCATCAACACCGGTTGCTTTGGTGTCCATGCTTTTAAGATTGCCTAATATCAAGTTTATTATTGTAACCCTTGGAGAAAAGGGATGCTTGATGCTTGAAAGAAGCACAACAGATGCTTCTGAGGCAGAGGAAATAGAT] [+] EMBL CB660616 [ TGGCGATGACGATGGTACGCATCATCGGCCCAAGTCCAGCTCAATCCTCCTCACCAACACCAAGACGACCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAGAGTGCAGGCAAGCCAAAGAAAACTTCCTATTTTGATTGATGCCGAACGGAAGAGGGATGGATTGGACGAGCTTCTCAATTTCGCATCTTATGTTGTATGCTCTGCAAAATTTCCTCAGGCTTGGACAGGAGCCTCATCAACACCGGTTGCTTTGGTGTCCATGCTTTTAAGATTGCCTAATATCAAGTTTATTATTGTAACCCTTGGAGAAAAGGGATGCTTGATGCTTGAAAGAAGCACAAC ] [+] EMBL CB668564 [ AGCTCAATCCTCCTCACCAACACCAAGACGACCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAG AGGCAAGCCAAAGAAAACTTCCTATTTTGATTGATGCCGAACGGAAGAGGGATGGATTGGACGAGCTTCTCAATTTCGCATCTTATGTTGTATGCTCTGCAAAATTTCCTCAGGCTTGGACAGGAGCCTCATCAACACCGGTTGCTTTGGTGTCCATGCTTTTAAGATTGCCTAATATCAAGTTTATTATTGTAACCCTTGGAGAAAAGGGATGCTTGATGCTTGAAAGAAGCACAACA ] [+] EMBL CB652739 [ GCCGCCGCCCACCGACCATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAG AGGCAAGCCAAAGAAAACTTCCTATTTTGATTGATGCCGAACGGAAGAGGGATGGATTGGACGAGCTTCTCAATTTCGCATCTTATGTTGTATGCTCTGCAAAATTTCCTCAGGCTTGGACAGGAGCCTCATCAACACCGGTTGCTTTGGTGTCCATGCTTTTAAGATTGCCTAATATCAAGTTTATTATTGTAACCCTTGGAGAAAgg ] consensusID : consensus_13343#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 884 fasta sequence [CCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAGAGGTAATATTTTCCTGGCACAAAATTTTATCTTCTTATAGAGGATCTTGCAAATATAAATGCCTACTCTCTGTTTTTAATATTTTTTTTGGGTAGGGGCACTCAAATTTCCCATTTGCGTTTAGTGGAAACTATTAGAGTTCTTAGAACATGAATTGTCACTTACTAAAAGTTTATTCCAGTTCTATACAACTTAATGGGCAACTGATACCATACATAGGAATGTTTTTTTTCCTATTCGGAATTCCACTCTTTCTACATGTATGTCTGGGAATATCACTATGAATAGGAAAGCTGCCATGTCCAATTCGTTAATATATAACATATGCAGTGTCAATGCCATGTGTAAGCCTTTTTTCTACACACCTGTAGCATTTTTTT] [+] EMBL CB645772 [CCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAGAGGTAATATTTTCCTGGCACAAAATTTTATCTTCTTATAGAGGATCTTGCAAATATAAATGCCTACTCTCTGTTTTTAATATTTTTTTTGGGTAGGGGCACTCAAATTTCCCATTTGCGTTTAGTGGAAACTATTAGAGTTCTTAGAACATGAATTGTCACTTACTAAAAGTTTATTCCAGTTCTATACAACTTAATGGGCAACTGATACCATACATAGGAATGTTTTTTTTCCTATTCGGAATTCCACTCTTTCTACATGTATGTCTGGGAATATCACTATGAATAGGAAAGCTGCC ] [+] EMBL AU062709 [ GTACTTGTATTCACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGCTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGNTTGCATGAAACTGCTTTACTAGTTGCTGAAGAGGTAATATTTTCCTGGCACAAAATTTTATCTTCTTATAGAGGATCTTGCAAATATAAATGCCTACTCTCTGTTTTTAATATTTTTTTTGGGTAGGGGCACTCAAATTTCCCATTTGCGTTTAGTGGNAACTATTAGAGTTCTTAGAACATGAATTGTCACTTACTAAAAGTTTATTCCAGTTCTATACAACTTAATGGGCAACTGATACCATACATAGGGATGTTT ] [+] EMBL CB639683 [ TTCACACTCCTGGTTATCCTCCT TGGTCCCTGAAGA CTCACACAAAAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAGAGGTAATATTTTCCTGGCACAAAATTTTATCTTCTTATAGAGGATCTTGCAAATATAAATGCCTACTCTCTGTTTTTAATATTTTTTTTGGGTAGGGGCACTCAAATTTCCCATTTGCGTTTAGTGGAAACTATTAGAGTTCTTAGAACATGAATTGTCACTTACTAAAAGTTTATTCCAGTTCTATACAACTTAATGGGCAACTGATACCATACATAGGAATGTTTTTTTTCCTATTCGGAATTCCACTCTTTCTACATGTATGTCTGGGAATATCACTATGAATAGGAAAGCTGCCATGTCCAATTCGTTAATATATAACATATGCAGTGTCAATGCCATGTGTAAGCCTTTTTTCTACACACCTGTAGCATTTTTTT] [+] EMBL OSS14677A [ ACACTCCTGGTTATCCTCCTATGGTCCCTGAAGAGNTCACACAAGAAAACTTGTTTGCCGCTTTAGACGGTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTTTACTAGTTGCTGAAGAGGTAATATTTTCCTGGCACAAAATTTTATCTTCTTATAGAGGATCTTGCAAATATAAATGCCTACTCTCTGTTTTTAATATTTTTTTTGGGTAGGGGCACTCAAATTTCCCATTTGCGTTTAGTGGAAACTATTAGAGTTCTTAGAACATGAATTGTCACTTACTAAAAGTTTATTCCAGTTCTATACAACTTAATGGGCAACTGATACCATACATAGGAATGTTTTTNTTCCTATTCGGAATTCCACTCTTTCTACATGTATGTCTGGGGATATCACTA ] consensusID : consensus_13343#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 813 fasta sequence [GCCCAAGTCCAGCTCAATCCTCCTCACCAACACCAAGACGACCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGTAACTCACTCATTTTCTACCTACTCTACATGTTCATTAGATATATATATATGTCCTCATGTTTGTACAACTAGCTAAGTACCCATCTGTTGCAATTGCAACGCAACTTTAAACTTGACAAGTTCTACATAATCCTTTTAAGAGATGATATATACTCCATTCCCAACTAAGCATAACATTCCTAAAAGAAGCAACATATGCAAATCTTTCTTCTAAACAGATGCCCCTTGACTTATTTTAAGTGAAGTACACCCTTTTGGTCACTTGCTTACCAATGGATATGCATTTACAGTTTATTCATTGGTATGATACAATGTACATATCACTTTGGTTCACGTCCTGATGTTAAAAGTGTCCCCTTTTTTTATCTCTTTTTTAAAAATAATCTTACCGTTCAT] [+] EMBL CB633089 [GCCCAAGTCCAGCTCAATCCTCCTCACCAACACCAAGACGACCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCCGCTTCTTCCTCCAAACCTCCCGTCGTGCTTGGCTGCGGCGCCGTCTCCGCGGACTACCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGACAAGATCCGAAGCCTAACGCTCAAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTTCGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAGCTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCTTTCACCTATATAATTGTTGACAACCAGACGTAACTCACTCATTTTCTACCTACTCTACATGTTCATTAGATATATATATATGTCCTCATGTTTGTACAACTAGCTAAGTACCCATCTGTTGCAATTGCAACGCAACTTTAAACTTGACAAGTTCTACATAATCCTTTTAAGAGATGATATATACTCCATTCCCAACTAAGCATAACATTCCTAAAAGAAGCAACATATGCAAATCTTTCTTCTAAACAGATGCCCCTTGACTTATTTTAAGTGAAGTACACCCTTTTGGTCACTTGCTTACCAATGGATATGCATTTACAGTTTATTCATTGGTATGATACAATGTACATATCACTTTGGTTCACGTCCTGATGTTAAAAGTGTCCCCTTTTTTTATCTCTTTTTTAAAAATAATCTTACCGTTCAT] consensusID : consensus_13343#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 663 fasta sequence [GGGACACTTTTAACATCAGGACGTGAACCAAAGTGATATGTACATTGTATCATACCAATGAATAAACTGTAAATGCATATCCATTGGTAAGCAAGTGACCAAAAGGGTGTACTTCACTTAAAATAAGTCAAGGGGCATCTGTTTAGAAGAAAGATTTGCATATGTTGCTTCTTTTAGGAATGTTATGCTTAGTTGGGAATGGAGTATATATCATCTCTTAAAAGGATTATGTAGAACTTGTCAAGTTTAAAGTTGCGTTGCAATTGCAACAGATGGGTACTTAGCTAGTTGTACAAACATGAGGACATATATATATATCTAATGAACATGTAGAGTAGGTAGAAAATGAGTGAGTTACGTCTGGTTGTCAACAATTATATAGGTGAAAGGTGAATTCCCCTCCTCTGCAACCTGAAAATTGATGCGGCATCCATGATAATTATTACTGGTAGAAAAGAAGAAAAGGCATAGTAAGTTAAAGTAATTAGTACCAGGATATGAGAGGTGTCGACCCCATCATCTTGCAGCTCCTTGAGAATATTTCTTCCTTGTGGGTCATTGGATACCTGGTAGTGCAGGCTTTCGTAAATAGGAGTAATAATTGAATTGAAGGAGGAGCAAGTGAAGTGGGTAGTACCTTGGATATGATCCTTGGGCGAAGGC] [+] EMBL CA766168 [GGGACACTTTTAACATCAGGACGTGAACCAAAGTGATATGTACATTGTATCATACCAATGAATAAACTGTAAATGCATATCCATTGGTAAGCAAGTGACCAAAAGGGTGTACTTCACTTAAAATAAGTCAAGGGGCATCTGTTTAGAAGAAAGATTTGCATATGTTGCTTCTTTTAGGAATGTTATGCTTAGTTGGGAATGGAGTATATATCATCTCTTAAAAGGATTATGTAGAACTTGTCAAGTTTAAAGTTGCGTTGCAATTGCAACAGATGGGTACTTAGCTAGTTGTACAAACATGAGGACATATATATATATCTAATGAACATGTAGAGTAGGTAGAAAATGAGTGAGTTACGTCTGGTTGTCAACAATTATATAGGTGAAAGGTGAATTCCCCTCCTCTGCAACCTGAAAATTGATGCGGCATCCATGATAATTATTACTGGTAGAAAAGAAGAAAAGGCATAGTAAGTTAAAGTAATTAGTACCAGGATATGAGAGGTGTCGACCCCATCATCTTGCAGCTCCTTGAGAATATTTCTTCCTTGTGGGTCATTGGATACCTGGTAGTGCAGGCTTTCGTAAATAGGAGTAATAATTGAATTGAAGGAGGAGCAAGTGAAGTGGGTAGTACCTTGGATATGATCCTTGGGCGAAGGC] consensusID : consensus_13343#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 286 fasta sequence [ATGGCCCTCTATCTGAGTCAGCTGCATCTCATCTGCATTCCTTCCTCGTGGCGATGACGATGGTACGCATCATCGGCCCAAGTCCAGCTCAATCCTCCTCACCAACACCAAGACGNCCACGACCTCCTCGNCCTCGCCGCCGCCACCGACCATGGGCTCCGCGCCGCTTCTTCTCAAACCTCCGTCGTGCTTGNTGCGGCGCGTCTCGCGGNTACTCGCACGTCGCTCTTCCACCCGCGCAAGTCGAGCTACGTNAAGTCAGGAGGGGAAAATGGATGCTTACGCG] [+] EMBL OSS15007A [ATGGCCCTCTATCTGAGTCAGCTGCATCTCATCTGCATTCCTTCCTCGTGGCGATGACGATGGTACGCATCATCGGCCCAAGTCCAGCTCAATCCTCCTCACCAACACCAAGACGNCCACGACCTCCTCGNCCTCGCCGCCGCCACCGACCATGGGCTCCGCGCCGCTTCTTCTCAAACCTCCGTCGTGCTTGNTGCGGCGCGTCTCGCGGNTACTCGCACGTCGCTCTTCCACCCGCGCAAGTCGAGCTACGTNAAGTCAGGAGGGGAAAATGGATGCTTACGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13343#0 AAGCCATGGATGGATGGCCCTCTATCTGAGTCAGCTGCATCTCATCTGCATTCCTTCCTC 60 consensus_13343#4 -------------ATGGCCCTCTATCTGAGTCAGCTGCATCTCATCTGCATTCCTTCCTC 47 consensus_13343#2 ------------------------------------------------------------ consensus_13343#1 ------------------------------------------------------------ consensus_13343#3 ------------------------------------------------------------ consensus_13343#0 GTGGCGATGACGATGGTACGCATCATCGGCCCAAGTCCAGCTCAATCCTCCTCACCAACA 120 consensus_13343#4 GTGGCGATGACGATGGTACGCATCATCGGCCCAAGTCCAGCTCAATCCTCCTCACCAACA 107 consensus_13343#2 ----------------------------GCCCAAGTCCAGCTCAATCCTCCTCACCAACA 32 consensus_13343#1 ------------------------------------------------------------ consensus_13343#3 ------------------------------------------------------------ consensus_13343#0 CCAAGACGACCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCC 180 consensus_13343#4 CCAAGACGNCCACGACCTCCTCGNCCTCGCCGCCGCC-ACCGACCATGGGCTCCGC-GCC 165 consensus_13343#2 CCAAGACGACCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCC 92 consensus_13343#1 ---------CCACGACCTCCTCGCCCTCGCCGCCGCCCACCGACCATGGCCTCCGCCGCC 51 consensus_13343#3 -------------------------------------------------------GGGAC 5 * * consensus_13343#0 GCTTCTTCCTCCAAACCTC---CCGTCGTGCT-TGGCTGCGGCGCCGTCTCCGCGGACTA 236 consensus_13343#4 GCTTCTTC--TCAAACCTC---C-GTCGTGCT-TGN-TGCGGCGC-GTCTC-GCGGNTAC 215 consensus_13343#2 GCTTCTTCCTCCAAACCTC---CCGTCGTGCT-TGGCTGCGGCGCCGTCTCCGCGGACTA 148 consensus_13343#1 GCTTCTTCCTCCAAACCTC---CCGTCGTGCT-TGGCTGCGGCGCCGTCTCCGCGGACTA 107 consensus_13343#3 ACTTTTAACATCAGGACGTGAACCAAAGTGATATGTACATTGTATCATACCAATGAATAA 65 *** * ** * * *** * ** * * * * consensus_13343#0 CCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGAC--AAGATCCGAAGCCTAACGCTC 294 consensus_13343#4 TCGCACGTCGCTCTTCCACCCGCGCAAGTCGAGCTACGTNAAGTCAGGAGGGGAAAATGG 275 consensus_13343#2 CCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGAC--AAGATCCGAAGCCTAACGCTC 206 consensus_13343#1 CCTCGCCACCGTCGCCTCCTTCCCCAACCCCGACGAC--AAGATCCGAAGCCTAACGCTC 165 consensus_13343#3 ACT-GTAAATG-CATATCCATTGGTAAG-CAAGTGACCAAAAG---GGTGTACTTCACTT 119 * * * ** * ** * * * consensus_13343#0 AAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTT 354 consensus_13343#4 ATGCTTACGCG------------------------------------------------- 286 consensus_13343#2 AAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTT 266 consensus_13343#1 AAGGTCCAGGGAGGCGGCAACACTGGCAATGCCTTGACCGCCGCTGCTCGTTTGGGCCTT 225 consensus_13343#3 AAAAT-AAGTCAAGGGGCATC--------TGTTTAGAAGAAAGATTTGCATATGTTGCTT 170 * * * consensus_13343#0 CGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAG 414 consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 CGCCCAAGGATCATATCCAAGGTATCCAATGACCCACAAGGAAGAAATATTCTCAAGGAG 326 consensus_13343#1 CGCCCAAGGATCATATCCAAGG-------------------AAGAAATATTCTCAAGGAG 266 consensus_13343#3 CTTTTAGGAATGTTATGCTTAGTTGGGAATG---------GAGTATATATCATCTCTTAA 221 consensus_13343#0 CTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCT 474 consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 CTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCT 386 consensus_13343#1 CTGCAAGATGATGGGGTCGACACCTCTCATATCCTGGTTGCAGAGGAGGGGAATTCACCT 326 consensus_13343#3 AAGGATTATGTAGAACTTGTCAAGTTTAAAGTTGCG-TTGCAATTGCAACAGATGGGT-- 278 consensus_13343#0 TTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGT 534 consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 TTCACCTATATAATTGTTGACAACCAGACGTAACTCACTCATTTTCTACCTACTCTACAT 446 consensus_13343#1 TTCACCTATATAATTGTTGACAACCAGACGAAAACTCGTACTTGTATTCACACTCCTGGT 386 consensus_13343#3 ---ACTTAGCTAGTTGT--ACAAACATGAGGACATATATATATATCTAATGAACATGTAG 333 consensus_13343#0 TATCCTCCTATGGTCCCTGAAGAGCTCACACAAG--AAAACTTGTTTGCCGCTTTAGACG 592 consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 GTTCATTAGATATATATATATGTCCTCATGTTTG--TACAACTAGCTAAGTACCCATCTG 504 consensus_13343#1 TATCCTCCTATGGTCCCTGAAGAGCTCACACAAG--AAAACTTGTTTGCCGCTTTAGACG 444 consensus_13343#3 AGTAGGTAGAAAATGAGTGAGTTACGTCTGGTTGTCAACAATTATATAGGTGAAAGGTGA 393 consensus_13343#0 GTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTT-TACTAGTTGCTGAA 651 consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 TTGCAATTGCAACGCAACTTTAAACTTGACAAGTTCTACATAATC-CTTTTAAGAGATGA 563 consensus_13343#1 GTGCTGACATTGTATATTTTGATGTCAGATTGCATGAAACTGCTT-TACTAGTTGCTGAA 503 consensus_13343#3 ATTCCCCTCCTCTGCAACCTGAAAATTGATGCGGCATCCATGATAATTATTACTGGTAGA 453 consensus_13343#0 GAGGCAAGCCAAAGAAAACTTCCTATTTTGATTGATGCCGAACG---GAAGAGGGATGGA 708 consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 TATATACTCCATTCCCAACTAAGCATAAC-ATTCCTAAAAGAAG---CAACATATGCAAA 619 consensus_13343#1 GAGGTAATATTTTCCTGGCACAAAATTTTATCTTCTTATAGAGGATCTTGCAAATATAAA 563 consensus_13343#3 AAAGAAGAAAAGGCATAGTAAGTTAAAGTAATTAGTACCAGGATA--TGAGAGGTGTCGA 511 consensus_13343#0 TTGGACGAGCTTC----TCAATTTCGCATCTTATGTTGTATGCTCTGCAAAATTTCC-TC 763 consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 TCTTTCTTCTAAA----CAGATGCCCCTTGACTTATTTTAAGTGAAGTACACCCTTT-TG 674 consensus_13343#1 TGCCTACTCTCTG----TTTTTAATATTTTTTTTGGGTAGGGGCACTCAAATTTCCCATT 619 consensus_13343#3 CCCCATCATCTTGCAGCTCCTTGAGAATATTTCTTCCTTGTGGGTCATTGGATACCTGGT 571 consensus_13343#0 AGGCTTGGACAGGAGCCTCATCAACACCGGTTGCTTTGGTGTCCATGCTTTTAAGATTGC 823 consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 GTCACTTGCTTACCAATGGATATGCATTTACAGTTTATTCATTGGTATGATACAATGTAC 734 consensus_13343#1 TGCGTTTAGTGGAAACTATTAGAGTTCTTAGAACATGAATTGTCACTTACTAAAAGTTTA 679 consensus_13343#3 AGTGCAGGCTTTCGTAAATAGGAGTAATAATTGAATTGAAGGAGGAGCAAGTGAAG-TGG 630 consensus_13343#0 CTAATATCAAGTTTATTATTGTAACC--CTTGGAGAAAAGGGATGCTTGATGCTTGAAAG 881 consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 ATATCACTTTGGTTCACGTCCTGATG--TTAAAAGTGTCCCCTTTTTTTATCTCTTTTTT 792 consensus_13343#1 TTCCAGTTCTATACAACTTAATGGGCAACTGATACCATACATAGGAATGTTTTTTTTCCT 739 consensus_13343#3 GTAGTACCTTGGATATGATCCTTGGG---CGAAGGC------------------------ 663 consensus_13343#0 AAGCACAACAGATGCTTCTGAGGCAGAGGAAATAGAT----------------------- 918 consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 AAAAATAATCTTACCGTTCAT--------------------------------------- 813 consensus_13343#1 ATTCGGAATTCCACTCTTTCTACATGTATGTCTGGGAATATCACTATGAATAGGAAAGCT 799 consensus_13343#3 ------------------------------------------------------------ consensus_13343#0 ------------------------------------------------------------ consensus_13343#4 ------------------------------------------------------------ consensus_13343#2 ------------------------------------------------------------ consensus_13343#1 GCCATGTCCAATTCGTTAATATATAACATATGCAGTGTCAATGCCATGTGTAAGCCTTTT 859 consensus_13343#3 ------------------------------------------------------------ consensus_13343#0 ------------------------- consensus_13343#4 ------------------------- consensus_13343#2 ------------------------- consensus_13343#1 TTCTACACACCTGTAGCATTTTTTT 884 consensus_13343#3 ------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||