Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13344 cluster # 13344       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13344#0 length = 823 sequences # 2  
consensus_13344#1 length = 816 sequences # 8  
consensus_13344#2 length = 652 sequences # 2  

consensusID : consensus_13344#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 823
fasta sequence
                              [TTCCACCGCTTTG-GCCTTTGCCTATCAATCGCCTTGG-CCCCAGAGTAGTACAGCGTCGATCTCTGCAGCCGTGGGTAGCAACAGAAAGCGAAGGCGAGTGAAAGAAACTCGATCGATCATCAGTGGNGGTGAAAG-AACAAACCAGGACGTTCGAACG-TACAGG-GGGATGAAGAT-GAGCAGGTTTCG-AGAGGAAGGCGCCGCTCCTGGTTCTAGTAATCTTGTGTGG-CTTCTTCTTCTTCTT-CCCTGGTTTCATCTGTGCCTCTGT-CAGAAGCGTGTCCTTNAGGAACCACCAAGCATCAGTCTCTGCTCTGGAGGCGCCTGTTCAAGTTGTGGCGGCGGCGGCTGAAGAGCGAGACCTCGACGAAGTGGCGGCTAGGATGGAGATCGAGGTCGACGACTACCCTGGGCTCGCGCTAACGACCGCCATGATCCTAAGAGCCCTAGAAGAGCATGAGTCGATCTCTGAACTGATCTGTCTGCAAGGGCTTGGTGGAACGATCCTATTTGAATATTCATTAGTAAATGATGTTCGTATAGACTGACTTGCATGTGTGATATATGCAGTGCTAGGACAGGAGCCTAGGATCATGAAGTGTTACCGAGATATTTATGATGCGTGGATTAGGTTTATCATGAGTGTTCTATACTATTGAAATCGATAGGTAGCGTATGTTTAATTACATATTGAGATTTGATAGCACAGAAGTTTGTGTGACGACTACGCTAATAGCTGTGCGTGTAGTATGATCAGTACTTCGAGTAGCTATATATTCGTGCGTGCTATACGTAGATGAGGATCTGAGGTTCGTATTAGTGACATGTC]

[+] EMBL OSC9051              [TTCCACCGCTTTG GCCTTTGCCTATCAATCGCCTTGG CCCCAGAGTAGTACAGCGTCGATCTCTGCAGCCGTGGGTAGCAACAGAAAGCGAAGGCGAGTGAAAGAAACTCGATCGATCATCAGTGGNGGTGAAAG AACAAACCAGGACGTTCGAACG TACAGG GGGATGAAGAT GAGCAGGTTTCG AGAGGAAGGCGCCGCTCCTGGTTCTAGTAATCTTGTGTGG CTTCTTCTTCTTCTT CCCTGGTTTCATCTGTGCCTCTGT CAGAAGCGTGTCCTTNAGGAACCACCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AW154994             [       GCTTTGCGCCTTTGCCTATCAATCGCCTTGGCCCCCAGAGTAGTACAGCGTGGATCTCTGCAGCCGTGGGTAGCAACAGCAAGCGAAGGCGAGTGAAAGAAACTCGATCGATCATCAGTGGCGGTGAAAGAAACAAACCAGGACGTTCGAACGATACAGGAGAGATGAAGATGGAGCAGGTTTCGCAGAGGAAGGCGCCGCTCCTGGTTCTAGTAATCTTGTGTGGCCTTCTTCTTCTTCTTCCCCTGGTTTCATCTGTGCCTCTGTCCAGAAGCGTGTCCTTGAGGAACCACCAAGCATCAGTCTCTGCTCTGGAGGCGCCTGTTCAAGTTGTGGCGGCGGCGGCTGAAGAGCGAGACCTCGACGAAGTGGCGGCTAGGATGGAGATCGAGGTCGACGACTACCCTGGGCTCGCGCTAACGACCGCCATGATCCTAAGAGCCCTAGAAGAGCATGAGTCGATCTCTGAACTGATCTGTCTGCAAGGGCTTGGTGGAACGATCCTATTTGAATATTCATTAGTAAATGATGTTCGTATAGACTGACTTGCATGTGTGATATATGCAGTGCTAGGACAGGAGCCTAGGATCATGAAGTGTTACCGAGATATTTATGATGCGTGGATTAGGTTTATCATGAGTGTTCTATACTATTGAAATCGATAGGTAGCGTATGTTTAATTACATATTGAGATTTGATAGCACAGAAGTTTGTGTGACGACTACGCTAATAGCTGTGCGTGTAGTATGATCAGTACTTCGAGTAGCTATATATTCGTGCGTGCTATACGTAGATGAGGATCTGAGGTTCGTATTAGTGACATGTC]


>consensus_13344#0 TTCCACCGCTTTGGCCTTTGCCTATCAATCGCCTTGGCCCCAGAGTAGTACAGCGTCGAT CTCTGCAGCCGTGGGTAGCAACAGAAAGCGAAGGCGAGTGAAAGAAACTCGATCGATCAT CAGTGGNGGTGAAAGAACAAACCAGGACGTTCGAACGTACAGGGGGATGAAGATGAGCAG GTTTCGAGAGGAAGGCGCCGCTCCTGGTTCTAGTAATCTTGTGTGGCTTCTTCTTCTTCT TCCCTGGTTTCATCTGTGCCTCTGTCAGAAGCGTGTCCTTNAGGAACCACCAAGCATCAG TCTCTGCTCTGGAGGCGCCTGTTCAAGTTGTGGCGGCGGCGGCTGAAGAGCGAGACCTCG ACGAAGTGGCGGCTAGGATGGAGATCGAGGTCGACGACTACCCTGGGCTCGCGCTAACGA CCGCCATGATCCTAAGAGCCCTAGAAGAGCATGAGTCGATCTCTGAACTGATCTGTCTGC AAGGGCTTGGTGGAACGATCCTATTTGAATATTCATTAGTAAATGATGTTCGTATAGACT GACTTGCATGTGTGATATATGCAGTGCTAGGACAGGAGCCTAGGATCATGAAGTGTTACC GAGATATTTATGATGCGTGGATTAGGTTTATCATGAGTGTTCTATACTATTGAAATCGAT AGGTAGCGTATGTTTAATTACATATTGAGATTTGATAGCACAGAAGTTTGTGTGACGACT ACGCTAATAGCTGTGCGTGTAGTATGATCAGTACTTCGAGTAGCTATATATTCGTGCGTG CTATACGTAGATGAGGATCTGAGGTTCGTATTAGTGACATGTC



consensusID : consensus_13344#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 816
fasta sequence
                              [TTCCACCGCTTTGCGCCTTTGCCTATCAATCGCCTTGGCCCCCAGAGTAGTACAGCGTCGATCTCTGCAGCCGTGGGTAGCAACAGCAAGCGAAGGCGAGTGAAAGAAACTCGATCGATCATCAGTGGCGGTGAAAGAAACAAACCAGGACGTTCGAACGATACAGGAGAGATGAAGATGGAGCAGGTTTCGCAGAGGAAGGCGCCGCTCCTGGTTCTAGTAATCTTGTGTGGCCTTCTTCTTCTTCTTCCCCTGGTTTCATCTGTGCCTCTGTCCAGAAGCGTGTCCTTGAGGAACCACCAAGCATCAGTCTCTGCTCTGGAGGCGCCTGTTCAGGTTGTGGCGGCGGCGGCTGAAGAGCGAGACCTCGACGAAGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCCGGCGCCAACAACCGCCATGATCCTAAGAG-CCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTAGCTTTTGTACGTAGTGATCGACATGCATGTGTGATATATGCAGTGCTTGGACAGGGGCTTAGTTAGTTAAGTCTTCACCGATTATTATCAGATCGGGTGAAGAGGTTGATTAGCTAGCTACCACTCTAGTTTAAAAAAGAGAAGGAAACTTTTCAACAAGTTCCTTGTGATATATGTATCTGCAC-GTACATGTGTCCATGTCCACCCCATCCGCCCGTTTTGTACATCTTGTGTACTGCTTACTCAATGACAATAGCAGATAAATATATTTCTACGAAAAAAA]

[+] EMBL AK121388             [TTCCACCGCTTTGCGCCTTTGCCTATCAATCGCCTTGGCCCCCAGAGTAGTACAGCGTCGATCTCTGCAGCCGTGGGTAGCAACAGCAAGCGAAGGCGAGTGAAAGAAACTCGATCGATCATCAGTGGCGGTGAAAGAAACAAACCAGGACGTTCGAACGATACAGGAGAGATGAAGATGGAGCAGGTTTCGCAGAGGAAGGCGCCGCTCCTGGTTCTAGTAATCTTGTGTGGCCTTCTTCTTCTTCTTCCCCTGGTTTCATCTGTGCCTCTGTCCAGAAGCGTGTCCTTGAGGAACCACCAAGCATCAGTCTCTGCTCTGGAGGCGCCTGTTCAGGTTGTGGCGGCGGCGGCTGAAGAGCGAGACCTCGACGAAGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCCGGCGCCAACAACCGCCATGATCCTAAGAG CCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTAGCTTTTGTACGTAGTGATCGACATGCATGTGTGATATATGCAGTGCTTGGACAGGGGCTTAGTTAGTTAAGTCTTCACCGATTATTATCAGATCGGGTGAAGAGGTTGATTAGCTAGCTACCACTCTAGTTTAAAAAAGAGAAGGAAACTTTTCAACAAGTTCCTTGTGATATATGTATCTGCAC GTACATGTGTCCATGTCCACCCCATCCGCCCGTTTTGTACATCTTGTGTACTGCTTACTCAATGACAATAGCAGATAAATATATTTCTACGAgat   ]
[+] EMBL CF294059             [TTCCACCGCTTTGCGCCTTTGCCTATCAATCGCCTTGGCCCCCAGAGTAGTACAGCGTCGATCTCTGCAGCCGTGGGTAGCAACAGCAAGCGAAGGCGAGTGAAAGAAACTCGATCGATCATCAGTGGCGGTGAAAGAAACAAACCAGGACGTTCGAACGATACAGGAGAGATGAAGATGGAGCAGGTTTCGCAGAGGAAGGCGCCGCTCCTGGTTCTAGTAATCTTGTGTGGCCTTCTTCTTCTTCTTCCCCTGGTTTCATCTGTGCCTCTGTCCAGAAGCGTGTCCTTGAGGAACCACCAAGCATCAGTCTCTGCTCTGGAGGCGCCTGTTCAGGTTGTGGCGGCGGCGGCTGAAGAGCGAGACCTCGACGAAGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCCGGCGCCAACAACCGCCATGATCCTAAGAG CCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTAGCTTTTGTACGTAGTGATCGACATGCATGTGTGATATATGCAGTGCTTGGACAGGGGCTTAGTTAGTTAAGTCTTCACC                                                                                                                                                                                                             ]
[+] EMBL CF293771             [                                   TGGCCCCCAGAGTAGTACAGCGTCCATCTCTGCAGCCGCGGGTAGCAACAGCAAGCGAAGGCGAGTGAAAGAAACTCGATCGATCATCAGTGGCGGTGAAAGAAACAAACCATTACGTTCGAACGATACAGGATATATGAAGATGGAGCAGGTTTCGCAGAGGAAGGCGCCGCTCCTGGTTCTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU173967             [                                        CCCAGAGTAGTACAGCGTCGATCTCTGCAGCCGTGGGTAGCAACAGCAAGCGAAGGCGAGTGAAAGAAACTCGATCGATCATCAGTGGCGGTGAAAGAAACAAACCAGGACGTTCGAACGATACAGGAGAGATGAAGATGGAGCAGGTTTCGCAGAGGAAGGCGCCGCTCCTGGTTCTAGTAATCTTGTGTGGCCTTCTTCTTCTTCTTCCCCTGGTTTCATCTGTGCCTCTGTCCAGAAGCGTGTCCTTGAGGAACCACCAAGCATCAGTCTCTGCTCTGGAGGCGCCTGTTCAGGTTGTGGCGGCGGCGGCTGAAGAGCGAGACCTCGACGAAGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCCGGCGCCAACAACCGCCATGATCCTAAGAG CCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGAT                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI795299             [                                                                                                                                                                                                                                                                                                          cCCAAGCATCAGTCTCTGCTCTGGAGGCGCCTGTTCA GTTTT  C GCGGCGGCTGAAGAGCGAGACCTCGACGAA T GCGGCGAGGATGGTGATCGAGGTCAACGACTA CCTGGCTCCGGCGCCAACAACCGCCATGATCCTAAGAGCCCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTAGCTTTTGTACGTAGTGATCGACATGCATGTGTGATATATGCAGTGCTTGGACAGGGGCTTAGTTAGTTAAGTCTTCACCGATTATTATCAGATCGGGTGAAGAGGTTGATTAGCTAGCTACCACTCTAGTTTAAAAAAGAGAAGGAAACTTTTCAACAAGTTCGTTGTGATATATGTATCTGCAC GTACATGTGTCCATGTCCACCCCATCCGCCCGTTTTGTACATCTTGTGTACTGCTTACTCAATGAC ATAGCAGATAAATATATTTCTA  AAAA   ]
[+] EMBL AU173968             [                                                                                                                                                                                                                                                                                                                                                                                      AGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCCGGCGCCAACAACCGCCATGATCCTAAGAG CCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTAGCTTTTGTACGTAGTGATCGACATGCATGTGTGATATATGCAGTGCTTGGACAGGGGCTTAGTTAGTTAAGTCTTCNCCGATTATTATCAGATCGGGTGAAGAGGTTGATTAGCTAGCTACCACTNTAGTTTAAAAAAGAGAAGGAAACTTTTCAACAAGTTCCTTGTGATATATGTATCTGCACGGTACATGTGTCCATGTCCACCCCATCCGCCCGTTTTGTACATCTTGTGTACTGCTTACTCAATGACAATAGCAGATAAATATATTTNTAAAAAAAAAA]
[-] EMBL CF294060             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGAAGAGCATGAAACGATCTCTGATCTGATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTAGCTTTTGTACGTAGTGATCGACATGCATGTGTGATATATGCAGTGCTTGGACAGGGGCTTAGTTAGTTAAGTCTTCACCGATTATTATCAGATCGGGTGAAGAGGTTGATTAGCTAGCTACCACTCTAGTTTAAAAAAGAGAAGGAAACTTTTCAACAAGTTCCTTGTGATATATGTATCTGCAC GTACATGTGTCCATGTCCACCCCATCCGCCCGTTTTGTACATCTTGTGTACTGCTTACTCAATGACAATAGCAGATAAATATAaaaa           ]
[-] EMBL CF292996             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGAGCATGAAACGATCTCTGATCTGATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTAGCTTTTGTACGTAGTGATCGACATGCATGTGTGATATATGCAGTGCTTGGACAGGGGCTTAGTTAGTTAAGTCTTCACCGATTATTATCAGATCGGGTGAAGAGGTTGATTAGCTAGCTACCACTCTAGTTTAAAAAAGAGAAGGAAACTTTTCAACAAGTTCCTTGTGATATATGTATCTGCAC GTACATGTGTCCATGTCCACCCCATCCGCCCGTTTTGTACATCTTGTGTACTGCTTACTCAATGACAATAGCAAATAAATATATTTTTACGAAAAAA ]


>consensus_13344#1 TTCCACCGCTTTGCGCCTTTGCCTATCAATCGCCTTGGCCCCCAGAGTAGTACAGCGTCG ATCTCTGCAGCCGTGGGTAGCAACAGCAAGCGAAGGCGAGTGAAAGAAACTCGATCGATC ATCAGTGGCGGTGAAAGAAACAAACCAGGACGTTCGAACGATACAGGAGAGATGAAGATG GAGCAGGTTTCGCAGAGGAAGGCGCCGCTCCTGGTTCTAGTAATCTTGTGTGGCCTTCTT CTTCTTCTTCCCCTGGTTTCATCTGTGCCTCTGTCCAGAAGCGTGTCCTTGAGGAACCAC CAAGCATCAGTCTCTGCTCTGGAGGCGCCTGTTCAGGTTGTGGCGGCGGCGGCTGAAGAG CGAGACCTCGACGAAGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCC GGCGCCAACAACCGCCATGATCCTAAGAGCCCTGGAAGAGCATGAAACGATCTCTGATCT GATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTAGCTTTTG TACGTAGTGATCGACATGCATGTGTGATATATGCAGTGCTTGGACAGGGGCTTAGTTAGT TAAGTCTTCACCGATTATTATCAGATCGGGTGAAGAGGTTGATTAGCTAGCTACCACTCT AGTTTAAAAAAGAGAAGGAAACTTTTCAACAAGTTCCTTGTGATATATGTATCTGCACGT ACATGTGTCCATGTCCACCCCATCCGCCCGTTTTGTACATCTTGTGTACTGCTTACTCAA TGACAATAGCAGATAAATATATTTCTACGAAAAAAA



consensusID : consensus_13344#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 652
fasta sequence
                              [CAACGCAAGTAGTAGGCAAACGCACAGTGAATAAGCTATCTACAGGTTGACGAGCTCGTGGCTTTTCCCTTGCATGTGAGCTGAGCTCTCTCATGAGTCATGAGTTTAGAGCAGATCAGAGCATATGTGATATGCAGCAGCAGCTGTTTCTGCTGTTGGGTCGCTGGGGCGCTCCACTCACATGCACAGCTAGCAGCTTGCTAGGCCGGCCATAGTGCAGTTCACATGCATGGCCACACTTCCCACTTGTGCACACAGTTCGTGTTTTCCCCACTGACAAACGCCTTTCCAGATAACTTTAGTAGTGTCTCACCTCAGTTCGTGCAAGAACATTCTCGACTGTTTTAACTACTACCGCAAATTGGTTTATATTATTACAGTATTACTTCGATATTTATCTATACGTAGTTAATAACAATTTGTAATCCTGTGGCTGATGATACAGGTTGTGTCGGCGGCGGCTGAAGAGCGAGACCTCGACGAAGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCCGGCGCCAACAACCGCCATGATCCTAAGAGCCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGATCTGATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTA]

[+] EMBL BI306229             [CAACGCAAGTAGTAGGCAAACGCACAGTGAATAAGCTATCTACAGGTTGACGAGCTCGTGGCTTTTCCCTTGCATGTGAGCTGAGCTCTCTCATGAGTCATGAGTTTAGAGCAGATCAGAGCATATGTGATATGCAGCAGCAGCTGTTTCTGCTGTTGGGTCGCTGGGGCGCTCCACTCACATGCACAGCTAGCAGCTTGCTAGGCCGGCCATAGTGCAGTTCACATGCATGGCCACACTTCCCACTTGTGCACACAGTTCGTGTTTTCCCCACTGACAAACGCCTTTCCAGATAACTTTAGTAGTGTCTCACCTCAGTTCGTGCAAGAACATTCTCGACTGTTTTAACTACTACCGCAAATTGGTTTATATTATTACAGTATTACTTCGATATTTATCTATACGTAGTTAATAACAATTTGTAATCCTGTGGCTGATGATACAGGTTGTGTCGGCGGCGGCTGAAGAGCGAGACCTCGACGAAGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCCGGCGCCAACAACCGCCATGATCCTAAGAGCCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGATCTGATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTA]
[+] EMBL CF292995             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCTGAAGAGCGAGACCTCGACGAAGTGGCGGCGAGGATGGCGATCGAGGTCAACGACTACCCTGGCTCCGGCGCC                                                                                                                     ]


>consensus_13344#2 CAACGCAAGTAGTAGGCAAACGCACAGTGAATAAGCTATCTACAGGTTGACGAGCTCGTG GCTTTTCCCTTGCATGTGAGCTGAGCTCTCTCATGAGTCATGAGTTTAGAGCAGATCAGA GCATATGTGATATGCAGCAGCAGCTGTTTCTGCTGTTGGGTCGCTGGGGCGCTCCACTCA CATGCACAGCTAGCAGCTTGCTAGGCCGGCCATAGTGCAGTTCACATGCATGGCCACACT TCCCACTTGTGCACACAGTTCGTGTTTTCCCCACTGACAAACGCCTTTCCAGATAACTTT AGTAGTGTCTCACCTCAGTTCGTGCAAGAACATTCTCGACTGTTTTAACTACTACCGCAA ATTGGTTTATATTATTACAGTATTACTTCGATATTTATCTATACGTAGTTAATAACAATT TGTAATCCTGTGGCTGATGATACAGGTTGTGTCGGCGGCGGCTGAAGAGCGAGACCTCGA CGAAGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCCGGCGCCAACAA CCGCCATGATCCTAAGAGCCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGATCTG ATCTGATCTGCAGGGCCTTGTTGATCGATACATATAGGAATATTCAGTATTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13344#0      ------------------------------------------------------------
consensus_13344#1      ------------------------------------------------------------
consensus_13344#2      CAACGCAAGTAGTAGGCAAACGCACAGTGAATAAGCTATCTACAGGTTGACGAGCTCGTG 60
                                                                                   

consensus_13344#0      ----TTCCACCGCTT-TG-GCCTTTGCCTATCAATCGCCTTGGCCCC-AGAGTAGTACAG 53
consensus_13344#1      ----TTCCACCGCTT-TGCGCCTTTGCCTATCAATCGCCTTGGCCCCCAGAGTAGTACAG 55
consensus_13344#2      GCTTTTCCCTTGCATGTGAGCTGAGCTCTCTCATGAGTCATGAGTTT-AGAGCAGATCAG 119
                           ****   ** * ** **      ** ***   * * **      **** **  ***

consensus_13344#0      CGTCGATCTC---TGCAGCCGTGG--GTAGCAACAGAAAG--CGAAGGCGAGTGAAAGAA 106
consensus_13344#1      CGTCGATCTC---TGCAGCCGTGG--GTAGCAACAGCAAG--CGAAGGCGAGTGAAAGAA 108
consensus_13344#2      AGCATATGTGATATGCAGCAGCAGCTGTTTCTGCTGTTGGGTCGCTGGGGCGCTCCACTC 179
                        *   ** *    ****** *  *  **  *  * *   *  **  ** * *    *   

consensus_13344#0      ACTCGATCGATCATCAG-TGGNGGTGAAAGAA-CAAACCAGGACGTTCGAACG--TACAG 162
consensus_13344#1      ACTCGATCGATCATCAG-TGGCGGTGAAAGAAACAAACCAGGACGTTCGAACGA-TACAG 166
consensus_13344#2      ACATGCACAGCTAGCAGCTTGCTAGGCCGGCCATAGTGCAGTTCACATGCATGGCCACAC 239
                       **  *  *    * *** * *    *   *    *   ***  *    * * *   *** 

consensus_13344#0      G----GG-GATGAAGATG-AGCAGGTTT--CG-AGAGGAAGGCGCCGCTCCTGGT---TC 210
consensus_13344#1      G----AGAGATGAAGATGGAGCAGGTTT--CGCAGAGGAAGGCGCCGCTCCTGGT---TC 217
consensus_13344#2      TTCCCACTTGTGCACACAGTTCGTGTTTTCCCCACTGACAAACGCCTTTCCAGATAACTT 299
                                 ** * *     *  ****  *  *  *  *  ****  *** * *   * 

consensus_13344#0      TAGTAAT------------CTTGTGTGG---C-TTCT-------TCTTCTTCTTCCC-TG 246
consensus_13344#1      TAGTAAT------------CTTGTGTGG---CCTTCT-------TCTTCTTCTTCCCCTG 255
consensus_13344#2      TAGTAGTGTCTCACCTCAGTTCGTGCAAGAACATTCTCGACTGTTTTAACTACTACCGCA 359
                       ***** *             * ***      * ****       * *   *  * **   

consensus_13344#0      GTTTCATCTGTGCCTCTGTC-AGAAGC----GTGTCCTTNAGGAACCACCAAGCATCAGT 301
consensus_13344#1      GTTTCATCTGTGCCTCTGTCCAGAAGC----GTGTCCTTGAGGAACCACCAAGCATCAGT 311
consensus_13344#2      AATTGGTTTATATTATTACAGTATTACTTCGATATTTATCTATACGTAGTTAATAACAAT 419
                         **  * * *     *         *     * *   *    *   *   *  * ** *

consensus_13344#0      CTCTGCTCTGGAGGCGCCTGTT-CAAGTTGTGGCGGCGGCGGCTGAAGAGCGAGACCTCG 360
consensus_13344#1      CTCTGCTCTGGAGGCGCCTGTT-CAGGTTGTGGCGGCGGCGGCTGAAGAGCGAGACCTCG 370
consensus_13344#2      TTGTAATCCTGTGGCTGATGATACAGGTTGTGTCGGCGGCGGCTGAAGAGCGAGACCTCG 479
                        * *  **  * ***   ** * ** ****** ***************************

consensus_13344#0      ACGAAGTGGCGGCTAGGATGGAGATCGAGGTCGACGACTACCCTGGGCTCG-CGCTAACG 419
consensus_13344#1      ACGAAGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCCGGCGCCAACA 430
consensus_13344#2      ACGAAGTGGCGGCGAGGATGGTGATCGAGGTCAACGACTACCCTGGCTCCGGCGCCAACA 539
                       ************* ******* ********** *************   ** *** *** 

consensus_13344#0      ACCGCCATGATCCTAAGAGCCCTAGAAGAGCATGAGTCGATCTCTGAACTGATCTG---- 475
consensus_13344#1      ACCGCCATGATCCTAAGAGCCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGA--- 487
consensus_13344#2      ACCGCCATGATCCTAAGAGCCCTGGAAGAGCATGAAACGATCTCTGATCTGATCTGATCT 599
                       *********************** ***********  ********** ********    

consensus_13344#0      -------TCTGCAAGGGCTTGGTGGAACGATCC-TATTTGAATATTCATTAGTAAATGAT 527
consensus_13344#1      -------TCTGCAGGGCCTTGTTG-ATCGATACATATAGGAATATTCAGTATTAGCTTTT 539
consensus_13344#2      GATCTGATCTGCAGGGCCTTGTTG-ATCGATACATATAGGAATATTCAGTATTA------ 652
                              ****** ** **** ** * **** * ***  ********* ** **      

consensus_13344#0      GTTCGTATAGACTGACTTGCATGTGTGATATATGCAGTGCTAGGACAGGAGCCTAGGATC 587
consensus_13344#1      GTACGTAGTGATCGACATGCATGTGTGATATATGCAGTGCTTGGACAGGGGCTTAGTTAG 599
consensus_13344#2      ------------------------------------------------------------
                                                                                   

consensus_13344#0      ATGAAGTGTTACCGAGATATTTATGATGCGTGGATTAGGTTTATCATGAGTGTTCTATAC 647
consensus_13344#1      TTAAGTCTTCACCGATTATTATCAGATCGGGTGAAGAGGTTGATTAGCTAGCTACCACTC 659
consensus_13344#2      ------------------------------------------------------------
                                                                                   

consensus_13344#0      TATTGAAATCGATAGGTAGCGTATGTTTAATTACATA-TTGAGATTTGATAGCACAGAAG 706
consensus_13344#1      TAGTTTAAAAAAGAGAAGGAAACTTTTCAACAAGTTCCTTGTGATATATGTATCTGCACG 719
consensus_13344#2      ------------------------------------------------------------
                                                                                   

consensus_13344#0      TTTGTGTGACGACTACGCTAATAGCTGTGCGTGTAGTATGATCAGTACTTCGAGTAGCTA 766
consensus_13344#1      TACATGTGTCCATGTCCACCCCATCCGCCCGTTTTGTAC-------ATCTTGTGTA-CTG 771
consensus_13344#2      ------------------------------------------------------------
                                                                                   

consensus_13344#0      TATATTCGTGCGTGCTATACGTAGATGAGGATCTGAGGTTCGTATTAGTGACATGTC 823
consensus_13344#1      CTTACTCA---ATGACAATAGCAGATAAATAT-----ATTTCTACGAAAAAAA---- 816
consensus_13344#2      ---------------------------------------------------------
                                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)