Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13347 cluster # 13347       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13347#0 length = 1694 sequences # 3  
consensus_13347#1 length = 1600 sequences # 8  
consensus_13347#2 length = 588 sequences # 1  

consensusID : consensus_13347#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1694
fasta sequence
                              [CGGCGGCGACGCGGTGCTGTTCATCGGCGACCTGTCGTACGCGGACAACCACCCGGGGCACGACAACAACCGGTGGGACACGTGGGCGCGGTTCGTGGAGCGGAGCGTGGCGTACCAGCCGTGGATCTGGACGACGGGGAACCACGAGCTGGACTTCGCGCCGGAGCTGGGGGAGACGACGCCGTTCAAGCCGTTCACGAACAGGTACCCGACGCCGTTCGGGGCGTCGGGGAGCACGCGGCCGCTGTGGTACTCGGTGAGGATGGCGTCGGCGCACGTGATCGTGCTGGCGTCGTACGCGGCGTACGGCAAGTACACGCCGCAGTGGAGGTGGTTGGAGGGGGAGCTGAGGCGCGTGGACAGGGCGGTGACGCCATGGCTGATCGTGTGCGTGCACTCGCCGTGGTACAGCAGCAACGGATACCACTACATGGAGGGGGAGTCGATGCGCGTGGAGTTCGAGCGGTGGCTCGTCGACGCCAAGGCCGACGTGGTGCTCGCCGGGCACGTCCACTCGTACGAGCGGACGCGGCGGGTGTCGAACGTGGCGTACGACATCGCCAACGGGATGGCGACGCCGGTGTTCAACCGGTCGGCGCCGGTGTACATCAACATCGGCGACGGGGGGAACATCGAGGGGCTCGCCGACGACTTCCGGTGGCCGCAGCCGGACTACTCGGTGTTCCGGGAGGCCAGCTTCGGCCAAGGCACGCTGCAGATCGTCAACCGGACGCACGCCTTCTACGAGTGGCACCGCAACAGCGACGGCGTCAAGGTCGTCGCCGACCATGCCTGGTTCACCAACCGATACTGGTTTCCCACCGACACCAACTAGCTACCCTTAATTTCCTACGGCCTACTTCCTCTGTCATGTAAAAAACCAATCTATACTAGTATAGGATATGATATATTCTAGTACTACGAATATAGATATACATCTATTCAGATTCATCGTATAAGAATATGTCGCATCCGATTCTAGATTCGTTTTCCGCGGGACGGAGAAAATACCTGCTTAATTTTTTCTTTATTACTAGTACTTTTCTTTTTCTAGATTTCGACCTGAATTCTATTTAGTACGAATGCATCAACAGCAAAACAGATTAGCACACTAGAGAGGGAGATGGATTAATAAAATCATTCGGTTCTGTTTGGAGTTTGCTAGTATAATATATTCTTGGTTCTGTTTGGAGTTTGCTATAATATATTCTTTCTTGACGAATTATCTCCATTCGTAAGCGTGCGTTATCCTCGCCTCAACTAATATTGGAATTACAGTTCTTCTGTCCAGAATAGTAGCTTGGCTATCCCTTTGTCTTTTGCTCTGCCGAATAAAACAGCAACTGCAGTTGTTACACAATTTTTCTAAAAAAATCTTAGTCCAAATTCCGAAACAATTCATTCTACTACTTGGGACCTGGGAGTGGAAAAGCAGTTCTGACTGAATAATTCATACGCGTGATAAATTGGGATATTGAGAGCCGTATAGCGAATCAGAATTTTGATATAACGTACTGAATGAACAAGAATGACCTCTGTATTGGGCATATCCGCATATGGCAATTTGTCGACCATCATGGAACAGTTTGATCAAGTTGATGGCATGCGTTTTTAGAGAAAGTTGATGCAATGCACTGGAAATGTAATGTTGTACTCCAAACAGAATTGGGCAAGCCCTGATATGCTATTCCGCC]

[-] EMBL CB633866             [CGGCGGCGACGCGGTGCTGTTCATCGGCGACCTGTCGTACGCGGACAACCACCCGGGGCACGACAACAACCGGTGGGACACGTGGGCGCGGTTCGTGGAGCGGAGCGTGGCGTACCAGCCGTGGATCTGGACGACGGGGAACCACGAGCTGGACTTCGCGCCGGAGCTGGGGGAGACGACGCCGTTCAAGCCGTTCACGAACAGGTACCCGACGCCGTTCGGGGCGTCGGGGAGCACGCGGCCGCTGTGGTACTCGGTGAGGATGGCGTCGGCGCACGTGATCGTGCTGGCGTCGTACGCGGCGTACGGCAAGTACACGCCGCAGTGGAGGTGGTTGGAGGGGGAGCTGAGGCGCGTGGACAGGGCGGTGACGCCATGGCTGATCGTGTGCGTGCACTCGCCGTGGTACAGCAGCAACGGATACCACTACATGGAGGGGGAGTCGATGCGCGTGGAGTTCGAGCGGTGGCTCGTCGACGCCAAGGCCGACGTGGTGCTCGCCGGGCACGTCCACTCGTACGAGCGGACGCGGCGGGTGTCGAACGTGGCGTACGACATCGCCAACGGGATGGCGACGCCGGTGTTCAACCGGTCGGCGCCGGTGTACATCAACATCGGCGACGGGGGGAACATCGAGGGGCTCGCCGACGACTTCCGGTGGCCGCAGCCGGACTACTCGGTGTTCCGGGAGGCCAGCTTCGGCCAAGGCACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA766800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGGGCTCGCCGACGACTTCCGGTGGCCGCAGCCGGACTACTCGGTGTTCCGGGAGGCCAGCTTCGGCCACGCCACGCTGCAGATCGTCAACCGGACGCACGCCTTCTACGAGTGGCACCGCAACAGCGACGGCGTCAAGGTCGTCGCCGACCATGCCTGGTTCACCAACCGATACTGGTTTCCCACCGACACCAACTAGCTACCCTTAATTTCCTACGGCCTACTTCCTCTGTCATGTAAAAAACCAATCTATACTAGTATAGGATATGATATATTCTAGTACTACGAATATAGATATACATCTATTCAGATTCATCGTATAAGAATATGTCGCATCCGATTCTAGATTCGTTTTCCGCGGGACGGAGAAAATACCTGCTTAATTTTTTCTTTATTACTAGTACTTTTCTTTTTCTAGATTTCGACCTGAATTCTATTTAGTACGAATGCATCAACAGCAAAACAGATTAGCACACTAGAGAGGGAGATGGATTAATAAAATCATTCGGTTCTGTTTGGAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK119972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACAGCAAAACAGATTAGCACACTAGAGAGGGAGATGGATTAATAAAATCATTCGGTTCTGTTTGGAGTTTGCTAGTATAATATATTCTTGGTTCTGTTTGGAGTTTGCTATAATATATTCTTTCTTGACGAATTATCTCCATTCGTAAGCGTGCGTTATCCTCGCCTCAACTAATATTGGAATTACAGTTCTTCTGTCCAGAATAGTAGCTTGGCTATCCCTTTGTCTTTTGCTCTGCCGAATAAAACAGCAACTGCAGTTGTTACACAATTTTTCTAAAAAAATCTTAGTCCAAATTCCGAAACAATTCATTCTACTACTTGGGACCTGGGAGTGGAAAAGCAGTTCTGACTGAATAATTCATACGCGTGATAAATTGGGATATTGAGAGCCGTATAGCGAATCAGAATTTTGATATAACGTACTGAATGAACAAGAATGACCTCTGTATTGGGCATATCCGCATATGGCAATTTGTCGACCATCATGGAACAGTTTGATCAAGTTGATGGCATGCGTTTTTAGAGAAAGTTGATGCAATGCACTGGAAATGTAATGTTGTACTCCAAACAGAATTGGGCAAGCCCTGATATGCTATTCCGCC]


>consensus_13347#0 CGGCGGCGACGCGGTGCTGTTCATCGGCGACCTGTCGTACGCGGACAACCACCCGGGGCA CGACAACAACCGGTGGGACACGTGGGCGCGGTTCGTGGAGCGGAGCGTGGCGTACCAGCC GTGGATCTGGACGACGGGGAACCACGAGCTGGACTTCGCGCCGGAGCTGGGGGAGACGAC GCCGTTCAAGCCGTTCACGAACAGGTACCCGACGCCGTTCGGGGCGTCGGGGAGCACGCG GCCGCTGTGGTACTCGGTGAGGATGGCGTCGGCGCACGTGATCGTGCTGGCGTCGTACGC GGCGTACGGCAAGTACACGCCGCAGTGGAGGTGGTTGGAGGGGGAGCTGAGGCGCGTGGA CAGGGCGGTGACGCCATGGCTGATCGTGTGCGTGCACTCGCCGTGGTACAGCAGCAACGG ATACCACTACATGGAGGGGGAGTCGATGCGCGTGGAGTTCGAGCGGTGGCTCGTCGACGC CAAGGCCGACGTGGTGCTCGCCGGGCACGTCCACTCGTACGAGCGGACGCGGCGGGTGTC GAACGTGGCGTACGACATCGCCAACGGGATGGCGACGCCGGTGTTCAACCGGTCGGCGCC GGTGTACATCAACATCGGCGACGGGGGGAACATCGAGGGGCTCGCCGACGACTTCCGGTG GCCGCAGCCGGACTACTCGGTGTTCCGGGAGGCCAGCTTCGGCCAAGGCACGCTGCAGAT CGTCAACCGGACGCACGCCTTCTACGAGTGGCACCGCAACAGCGACGGCGTCAAGGTCGT CGCCGACCATGCCTGGTTCACCAACCGATACTGGTTTCCCACCGACACCAACTAGCTACC CTTAATTTCCTACGGCCTACTTCCTCTGTCATGTAAAAAACCAATCTATACTAGTATAGG ATATGATATATTCTAGTACTACGAATATAGATATACATCTATTCAGATTCATCGTATAAG AATATGTCGCATCCGATTCTAGATTCGTTTTCCGCGGGACGGAGAAAATACCTGCTTAAT TTTTTCTTTATTACTAGTACTTTTCTTTTTCTAGATTTCGACCTGAATTCTATTTAGTAC GAATGCATCAACAGCAAAACAGATTAGCACACTAGAGAGGGAGATGGATTAATAAAATCA TTCGGTTCTGTTTGGAGTTTGCTAGTATAATATATTCTTGGTTCTGTTTGGAGTTTGCTA TAATATATTCTTTCTTGACGAATTATCTCCATTCGTAAGCGTGCGTTATCCTCGCCTCAA CTAATATTGGAATTACAGTTCTTCTGTCCAGAATAGTAGCTTGGCTATCCCTTTGTCTTT TGCTCTGCCGAATAAAACAGCAACTGCAGTTGTTACACAATTTTTCTAAAAAAATCTTAG TCCAAATTCCGAAACAATTCATTCTACTACTTGGGACCTGGGAGTGGAAAAGCAGTTCTG ACTGAATAATTCATACGCGTGATAAATTGGGATATTGAGAGCCGTATAGCGAATCAGAAT TTTGATATAACGTACTGAATGAACAAGAATGACCTCTGTATTGGGCATATCCGCATATGG CAATTTGTCGACCATCATGGAACAGTTTGATCAAGTTGATGGCATGCGTTTTTAGAGAAA GTTGATGCAATGCACTGGAAATGTAATGTTGTACTCCAAACAGAATTGGGCAAGCCCTGA TATGCTATTCCGCC



consensusID : consensus_13347#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1600
fasta sequence
                              [AGAGTAGCACAAGAAGCAGAGTGCGGCTAGCTCACAGTCACCATGGGGATGCTGCGGTGGGGAGCTCACCTCCTCCTCCTCCTCCTCGCCGCGGCGACGTGGACGTGCGCCGGCGCCGGCGCCGG-GGTGACGAGCGAGTACCGGCGGAAGCTGGAGGCGACGGTGGACATGCCGCTCGACGCCGACGTCTTCCGCGTGCCGCCGGGCTACAATGCTCCGCAGCAGGTGCACATCACGCTGGGGGACCAGACGGGGACGGCGATGACGGTGTCGTGGGTGACGGCGAACGAGCTGGGGAGCAACACGGTCAGGTACGGGAGC-TCGCCGGAGAAGC-TGGACCGCGCGGCGGAGGGGAGCCACACGAGGTACGACTA-CTTCAACTAC-ACCTCCGGCTTCATCCACCACTGCACCCTCACCGGCCTCACCCACGCCACCAAGTACTACTACGCCATGGGCTTCGATCACACCGTCCGTACCTTCTCCTTCACCACGCCGCCCAAGCCCGCTCCCGACGCCCCCTTCAAGTTCGGCCTCATCGGTGACCTCGGGCAGACGTTCGACTCGAACAGCACGCTGGCGCACTACGAGGCCAACGGCGGCGACGCCGT-CCTCTTCGTCGGCGACCTCTCCTACGCCGACAACTACCCTCTCCACGACAACAACCGCTGGGACACGTGGGCGCGCTTCGTCGAGCGCAGCGTCGCGTACCAGCCATGGATCTGGACCGCCGGCAACCACGAGCTGGACTACGCGCCGGAGCTGGGCGAGACGGTCCCCTTCAAGCCCTTCACCCACCGGTACCCGACGCCGTACCGCGCCGCCGGCAGCACGGAGCCGTTCTGGTACTCCGTCAAGATCGCCTCCGCGCACGTCATCGTGCTGGCCTCCTACTCCGCCTACGGCAAGTACA-CGCCGCAGTGGACATGGCTGCAGGAGGAGCTCGCCACCCGCGTCGACCGCAAGCTCACCCCGTGGCTCATCGTGCTCATGCACTCGCCGTGGTACAACAGCAACAACTACCACTACATGGAGGGGGAGACGATGCGCGTCCAGTTCGAGCGGTGGCTCGTCGACGCCAAGGTGGACGTGGTGCTCGCCGGCCACGTCCACTCGTACGAGCGCAGCCGGAGGTTCGCGAACATCGACTACAACATCGTGAACGGCAAGGCGACGCCGGCGGCGAACGTGGACGCGCCGGTGTACATCACGATCGGCGACGGGGGGAACATCGAGGGGATCGCCAACAACTTCACGGTGCCGCAGCCGGCCTACTCGGCGTTCCGGGAGGCCAGCTTCGGCCACGCCACGCTGGAGATCAAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTCGCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTATTAATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTATTGCCATTCTTCTTCTTCTTTAGCTTTGGATAATAAATACTCCTACTATGCAATAACAAATACTACTAGCAGAGTCTATCTTGTTAAGCCGTGAGATAATTAATCCCCAAA]

[+] EMBL AK066273             [AGAGTAGCACAAGAAGCAGAGTGCGGCTAGCTCACAGTCACCATGGGGATGCTGCGGTGGGGAGCTCACCTCCTCCTCCTCCTCCTCGCCGCGGCGACGTGGACGTGCGCCGGCGCCGGCGCCGG GGTGACGAGCGAGTACCGGCGGAAGCTGGAGGCGACGGTGGACATGCCGCTCGACGCCGACGTCTTCCGCGTGCCGCCGGGCTACAATGCTCCGCAGCAGGTGCACATCACGCTGGGGGACCAGACGGGGACGGCGATGACGGTGTCGTGGGTGACGGCGAACGAGCTGGGGAGCAACACGGTCAGGTACGGGAGC TCGCCGGAGAAGC TGGACCGCGCGGCGGAGGGGAGCCACACGAGGTACGACTA CTTCAACTAC ACCTCCGGCTTCATCCACCACTGCACCCTCACCGGCCTCACCCACGCCACCAAGTACTACTACGCCATGGGCTTCGATCACACCGTCCGTACCTTCTCCTTCACCACGCCGCCCAAGCCCGCTCCCGACGCCCCCTTCAAGTTCGGCCTCATCGGTGACCTCGGGCAGACGTTCGTCTCGAACAGCACGCTGGCGCACTACGAGGCCAACGGCGGCGACGCCGT CCTCTTCGTCGGCGACCTCTCCTACGCCGACAACTACCCTCTCCACGACAACAACCGCTGGGACACGTGGGCGCGCTTCGTCGAGCGCAGCGTCGCGTACCAGCCATGGATCTGGACCGCCGGCAACCACGAGCTGGACTACGCGCCGGAGCTGGGCGAGACGGTCCCCTTCAAGCCCTTCACCCACCGGTACCCGACGCCGTACCGCGCCGCCGGCAGCACGGAGCCGTTCTGGTACTCCGTCAAGATCGCCTCCGCGCACGTCATCGTGCTGGCCTCCTACTCCGCCTACGGCAAGTACA CGCCGCAGTGGACATGGCTGCAGGAGGAGCTCGCCACCCGCGTCGACCGCAAGCTCACCCCGTGGCTCATCGTGCTCATGCACTCGCCGTGGTACAACAGCAACAACTACCACTACATGGAGGGGGAGACGATGCGCGTCCAGTTCGAGCGGTGTCTCGTCGACGCCAAGGTGGACGTGGTGCTCGCCGGCCACGTCCACTCGTACGAGCGCAGCCGGAGGTTCGCGAACATCGACTACAACATCGTGAACGGCAAGGCGACGCCGGCGGCGAACGTGGACGCGCCGGTGTACATCACGATCGGCGACGGGGGGAACATCGAAGGGATCGCCAACAACTTCACGGTGCCGCAGCCGGCCTACTCGGCGTTCCGGGAGGCCAGCTTCGGCCACGCCACGCTGGAGATCAAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTCGCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTATTAATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTATTGCCATTCTTCTTCTTCTTTAGCTTTGGATAATAAATACTCCTACTATGCAATAACAAATACTACTAGCAGAGTCTATCTTGTTAAGCCGTGAGATAATTAATCCCCAA ]
[+] EMBL AK058368             [ GAGTAGCACAAGAAGCAGAGTGCGGCTAGTTCACAGTCACCATGGGGATGCTGCGGTGGGGAGCTCACCTCCTCCTCCTCCTCCTCGCCGCGGCGACGTGGACGTGCGCCGGCGCCGGCGCCGG GGTGACGAGCGAGTACCGGCGGAAGCTGGAGGCGACGGTGGACATGCCGCTCGACGCCGACGTCTTCCGCGTGCCGCCGGGCTACAATGCTCCGCAGCAGGTGCACATCACGCTGGGGGACCAGACGGGGACGGCGATGACGGTGTCGTGGGTGACGGCGAACGAGCTGGGGAGCAACACGGTCAGGTACGGGAGC TCGCCGGAGAAGC TGGACCGCGCGGCGGAGGGGAGCCACACGAGGTACGACTA CTTCAACTAC ACCTCCGGCTTCATCCACCACTGCACCCTCACCGGCCTCACCCACGCCACCAAGTACTACTACGCCATGGGCTTCGATCACACCGTCCGTACCTTCTCCTTCACCACGCCGCCCAAGCCCGCTCCCGACGCCCCCTTCAAGTTCGGCCTCATCGGTGACCTCGGGCAGACGTTCGACTCGAACAGCACGCTGGCGCACTACGAGGCCAACGGCGGCGACGCCGT CCTCTTCGTCGGCGACCTCTCCTACGCCGACAACTACCCTCTCCACGACAACAACCGCTGGGACACGTGGGCGCGCTTCGTCGAGCGCAGCGTCGCGTACCAGCCATGGATCTGGACCGCCGGCAACCACGAGCTGGACTACGCGCCGGAGCTGGGCGAGACGGTCCCCTTCAAGCCCTTCACCCACCGGTACCCGACGCCGTACCGCGCCGCCGGCAGCACGGAGCCGTTCTGGTACTCCGTCAAGATCGCCTCCGCGCACGTCATCGTGCTGGCCTCCTACTCCGCCTACGGCAAGTACA CGCCGCAGTGGACATGGCTGCAGGAGGAGCTCGCCACCCGCGTCGACCGCAAGCTCACCCCGTGGCTCATCGTGCTCATGCACTCGCCGTGGTACAACAGCAACAACTACCACTACATGGAGGGGGAGACGATGCGCGTCCAGTTCGAGCGGTGGCTCGTCGACGCCAAGGTGGACGTGGTGCTCGCCGGCCACGTCCACTCGTACGAGCGCAGCCGGAGGTTCGCGAACATCGACTACAACATCGTGAACGGCAAGGCGACGCCGGCGGCGAACGTGGACGCGCCGGTGTACATCACGATCGGCGACGGGGGGAACATCGAGGGGATCGCCAACAACTTCACGGTGCCGCAGCCGGCCTACTCGGCGTTCCGGGAGGCCAGCTTCGGCCACGCCACGCTGGAGATCAAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTCGCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTATTAATCGACTCCAACCATCT                                                                                                                                               ]
[+] EMBL AB066561             [                  GAGTGCGGCTAGCTCACAGTCACCATGGGGATGCTGCGGTGGGGAGCTCACCTCCTCCTCCTCCTCCTCGCCGCGGCGACGTGGACGTGCGCCGGCGCCGGCGCCGG GGTGACGAGCGAGTACCGGCGGAAGCTGGAGGCGACGGTGGACATGCCGCTCGACGCCGACGTCTTCCGCGTGCCGCCGGGCTACAATGCTCCGCAGCAGGTGCACATCACGCTGGGGGACCAGACGGGGACGGCGATGACGGTGTCGTGGGTGACGGCGAACGAGCTGGGGAGCAACACGGTCAGGTACGGGAGC TCGCCGGAGAAGC TGGACCGCGCGGCGGAGGGGAGCCACACGAGGTACGACTA CTTCAACTAC ACCTCCGGCTTCATCCACCACTGCACCCTCACCGGCCTCACCCACGCCACCAAGTACTACTACGCCATGGGCTTCGATCACACCGTCCGTACCTTCTCCTTCACCACGCCGCCCAAGCCCGCTCCCGACGCCCCCTTCAAGTTCGGCCTCATCGGTGACCTCGGGCAGACGTTCGACTCGAACAGCACGCTGGCGCACTACGAGGCCAACGGCGGCGACG CGTCCCTCTTCGTCGGCGACCTCTCCTACGCCGACAACTACCCTCTCCACGACAACAACCGCTGGGACACGTGGGCGCGCTTCGTCGAGCGCAG   CGCGTACCAGCCATGGATCTGGACCGCCGGCAACCACGAGCTGGACTACGCGCCGGAGCTGGGCGAGACGGTCCCCTTCAAGCCCTTCACCCACCGGTACCCGACGCCGTACCGCGCCGCCGGCAGCACGGAGCCGTTCTGGTACTCCGTCAAGATCGCCTCCGCGCACGTCATCGTGCTGGCCTCCTACTCCGCCTACGGCAAGTACA CGCCGCAGTGGACATGGCTGCAGGAGGAGCTCGCCACCCGCGTCGACCGCAAGCTCACCCCGTGGCTCATCGTGCTCATGCACTCGCCGTGGTACAACAGCAACAACTACCACTACATGGAGGGGGAGACGATGCGCGTCCAGTTCGAGCGGTGGCTCGTCGACGCCAAGGTGGACGTGGTGCTCGCCGGCCACGTCCACTCGTACGAGCGCAGCCGGAGGTTCGCGAACATCGACTACAACATCGTGAACGGCAAGGCGACGCCGGCGGCGAACGTGGACGCGCCGGTGTACATCACGATCGGCGACGGGGGGAACATCGAGGGGATCGCCAACAACTTCACGGTGCCGCAGCCGGCCTACTCGGCGTTCCGGGAGGCCAGCTTCGGCCACGCCACGCTGGAGATCAAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTCGCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTATTAATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTATTGCCATTCTTCTTCTTCTTTAGCTTTGGATAATAAATACTCCTACTATGCAATAACAAATACTACTAGCAGAGTCTATCTTGTTAAGCCGTGAGATAATTAATCCCCAA ]
[+] EMBL AU065845             [                  GAGTGCGGCTAGCTCACAGTCACCATGGGGATGCTGCGGTGGGGAGCTCACCTCCTCCTCCTCCTCCTCGCCGCGGCGACGTGGACGTGCGCCGGCGCCGGCGCCGGNGGTGACGAGCGANTACCGGCGGAAGCTGGAGGCGACGGTGGACATGCCGCTCGACGCCGACGTCTTCCGCNTGCCGCCGGGCTACAATNCTCCGCAGCAGGTGCACATCACGCTGGGGGACCAGACGGGGACGGCGATGACGGTNTCGTGGGTNACGGCGAACGAGCTGGGGAGCAACACGGTCAGGTACGGGAGCTTCGCCGGAGAAGCTTGGACCGCGCGGCGGAGGGGAGCCACACGAGGTACGACTANTTTAAATTACAACTTCCGGTTTCATCCACCANTTCAACCTtaac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB655358             [                                                                            TCCTCCTCCTCGCCGCGGCGACGTGGACGTGCGCCGGCGCCGGCGCCGG GGTGACGAGCGAGTACCGGCGGAAGCTGGAGGCGACGGTGGACATGCCGCTCGACGCCGACGTCTTCCGCGTGCCGCCGGGCTACAATGCTCCGCAGCAGGTGCACATCACGCTGGGGGACCAGACGGGGACGGCGATGACGGTGTCGTGGGTGACGGCGAACGAGCTGGGGAGCAACACGGTCAGGTACGGGAGC TCGCCGGATATTC TGGACCGCGCGGCGGAGGGGAGCCACACGAGGTACGACTA CTTCAACTAC ACCTCCGGCTTCATCCACCACTGCACCCTCACCGGCCTCACCCACGCCACCAAGTACTACTACGCCATGGGCTTCGATCACACCGTCCGTACCTTCTCCTTCACCACGCCGCCCAAGCCCGCTCCCGACGCCCCCTTCAAGTTCGGCCTCATCGGTGACCTCGGGCAGACGTTCGACTCGAACAGCACGCTGGCGCACTACGAGGCCAACGGCGGCGACGCCGT CCTCTTCGTCGGCGACCTCTCCTACGCCGACAACTACCCTCTCCACGACAACAACCGCTGGGACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF323881             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCGATCACACCGTCCGTACCTTCTCCTTCACCACGCCGCCCAAGCCCGCTCCCGACGCCCCCTTCAAGTTCGGCCTCATCGGTGACCTCGGGCAGACGTTCGACTCGAACAGCACGCTGGCGCACTACGAGGCCAACGGCGGCGACGCCGT CCTCTTCGTCGGCGACCTCTCCTACGCCGACAACTACCCTCTCCACGACAACAACCGCTGGGACACGTGGGCGCGCTTCGTCGAGCGCAGCGTCGCGTACCAGCCATGGATCTGGACCGCCGGCAACCACGAGCTGGACTACGCGCCGGAGCTGGGCGAGACGGTCCCCTTCAAGCCCTTCACCCACCGGTACCCGACGCCGTACCGCGCCGCCGGCAGCACGGAGCCGTTCTGGTACTCCGTCAAGATCGCCTCCGCGCACGTCATCGTGCTGGCCTCCTACTCCGCCTACGGCAAGTACACCGCCGCAGTGGACATGGCTGCAGGAGGAGCTCGCCACCCGCGTCGACCGCAAGCTCACCCCGTGGCTCATCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB674911             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCAGCACGGAGCCGTTCTGGTACTCCGTCAAGATCGCCTCCGCGCACGTCATCGTGCTGGCCTCCTACTCCGCCTACGGCAAGTACA CGCCGCAGTGGACATGGCTGCAGGAGGAGCTCGCCACCCGCGTCGACCGCAAGCTCACCCCGTGGCTCATCGTGCTCATGCACTCGCCGTGGTACAACAGCAACAACTACCACTACATGGAGGGGGAGACGATGCGCGTCCAGTTCGAGCGGTGGCTCGTCGACGCCAAGGTGGACGTGGTGCTCGCCGGCCACGTCCACTCGTACGAGCGCAGCCGGAGGTTCGCGAACATCGACTACAACATCGTGAACGGCAAGGCGACGCCGGCGGCGAACGTGGACGCGCCGGTGTACATCACGATCGGCGACGGGGGGAACATCGAGGGGATCGCCAACAACTTCACGGTGCCGCAGCCGGCCTACTCGGCGTTCCGGGAGGCCAGCTTCGGCCACGCCACGCTGGAGATCAAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTCGCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTATTAATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTATTGCCATTCTTCTTCTTCTTTAGCTTTGGATAATAAATACTCCTACTAGGCAATAACAAATACTACTAGCAGAGTCTATCT                              ]
[-] EMBL CB655359             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCGCGCACGTCATCGTGCTGGCCTCCTACTCCGCCTACGGCAAGTACA CGCCGCAGTGGACATGGCTGCAGGAGGAGCTCGCCACCCGCGTCGACCGCAAGCTCACCCCGTGGCTCATCGTGCTCATGCACTCGCCGTGGTACAACAGCAACAACTACCACTACATGGAGGGGGAGACGATGCGCGTCCAGTTCGAGCGGTGGCTCGTCGACGCCAAGGTGGACGTGGTGCTCGCCGGCCACGTCCACTCGTACGAGCGCAGCCGGAGGTTCGCGAACATCGACTACAACATCGTGAACGGCAAGGCGACGCCGGCGGCGAACGTGGACGCGCCGGTGTACATCACGATCGGCGACGGGGGGAACATCGAGGGGATCGCCAACAACTTCACGGTGCCGCAGCCGGCCTACTCGGCGTTCCGGGAGGCCAGCTTCGGCCACGCCACGCTGGAGATCAAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTCGCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTATTAATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTATTGCCATTCTTCTTCTTCTTTAGCTTTGGATAATAAATACTCCTACTATGCAATAACAAATACTACTAGCAGAGTCTATCTTGTTAAGCCGTGAGATAATTAATCCCCAAA]


>consensus_13347#1 AGAGTAGCACAAGAAGCAGAGTGCGGCTAGCTCACAGTCACCATGGGGATGCTGCGGTGG GGAGCTCACCTCCTCCTCCTCCTCCTCGCCGCGGCGACGTGGACGTGCGCCGGCGCCGGC GCCGGGGTGACGAGCGAGTACCGGCGGAAGCTGGAGGCGACGGTGGACATGCCGCTCGAC GCCGACGTCTTCCGCGTGCCGCCGGGCTACAATGCTCCGCAGCAGGTGCACATCACGCTG GGGGACCAGACGGGGACGGCGATGACGGTGTCGTGGGTGACGGCGAACGAGCTGGGGAGC AACACGGTCAGGTACGGGAGCTCGCCGGAGAAGCTGGACCGCGCGGCGGAGGGGAGCCAC ACGAGGTACGACTACTTCAACTACACCTCCGGCTTCATCCACCACTGCACCCTCACCGGC CTCACCCACGCCACCAAGTACTACTACGCCATGGGCTTCGATCACACCGTCCGTACCTTC TCCTTCACCACGCCGCCCAAGCCCGCTCCCGACGCCCCCTTCAAGTTCGGCCTCATCGGT GACCTCGGGCAGACGTTCGACTCGAACAGCACGCTGGCGCACTACGAGGCCAACGGCGGC GACGCCGTCCTCTTCGTCGGCGACCTCTCCTACGCCGACAACTACCCTCTCCACGACAAC AACCGCTGGGACACGTGGGCGCGCTTCGTCGAGCGCAGCGTCGCGTACCAGCCATGGATC TGGACCGCCGGCAACCACGAGCTGGACTACGCGCCGGAGCTGGGCGAGACGGTCCCCTTC AAGCCCTTCACCCACCGGTACCCGACGCCGTACCGCGCCGCCGGCAGCACGGAGCCGTTC TGGTACTCCGTCAAGATCGCCTCCGCGCACGTCATCGTGCTGGCCTCCTACTCCGCCTAC GGCAAGTACACGCCGCAGTGGACATGGCTGCAGGAGGAGCTCGCCACCCGCGTCGACCGC AAGCTCACCCCGTGGCTCATCGTGCTCATGCACTCGCCGTGGTACAACAGCAACAACTAC CACTACATGGAGGGGGAGACGATGCGCGTCCAGTTCGAGCGGTGGCTCGTCGACGCCAAG GTGGACGTGGTGCTCGCCGGCCACGTCCACTCGTACGAGCGCAGCCGGAGGTTCGCGAAC ATCGACTACAACATCGTGAACGGCAAGGCGACGCCGGCGGCGAACGTGGACGCGCCGGTG TACATCACGATCGGCGACGGGGGGAACATCGAGGGGATCGCCAACAACTTCACGGTGCCG CAGCCGGCCTACTCGGCGTTCCGGGAGGCCAGCTTCGGCCACGCCACGCTGGAGATCAAG AACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTCGCC GACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTATTA ATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTATTGCCATTCTT CTTCTTCTTTAGCTTTGGATAATAAATACTCCTACTATGCAATAACAAATACTACTAGCA GAGTCTATCTTGTTAAGCCGTGAGATAATTAATCCCCAAA



consensusID : consensus_13347#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 588
fasta sequence
                              [ATCCNCGGATTTTGGCCNCNATCCNNGAAAACCAGGANGNGGGGGTTCCACCGTTGCNAAGTACCGGGTTTTGGTNANATTNCGGGAAAANGAAAANACNAAAATGGGGGGGGGAGGGGGTCATTGGGCGGGTTTTTNNANCAGGGGAAGGGGTTCCCGGCNAAATTCNAATTGAGGGCACCGGGGGTTGGGAAACTGAATAAAAACTTGTGACGGCAAGGGACGCCGGCGGCGAAGTGGACGCCCCGGTTACATCACGATCGCGACGGGGGGGAACATCGAGGGGATCGCCAACAAATTCACGGTGCCGCAGCCGGCTATTCGGCGTTCCGGGAGGCCAGCTTTCGGCCAACGCCACGCTGGAGATCAAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTCGCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTATTAATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTATTGCCATTCTTCTTCTTCTTTAGCTTTGGATAATAAATACTCCTACTA]

[-] EMBL BE229096             [ATCCNCGGATTTTGGCCNCNATCCNNGAAAACCAGGANGNGGGGGTTCCACCGTTGCNAAGTACCGGGTTTTGGTNANATTNCGGGAAAANGAAAANACNAAAATGGGGGGGGGAGGGGGTCATTGGGCGGGTTTTTNNANCAGGGGAAGGGGTTCCCGGCNAAATTCNAATTGAGGGCACCGGGGGTTGGGAAACTGAATAAAAACTTGTGACGGCAAGGGACGCCGGCGGCGAAGTGGACGCCCCGGTTACATCACGATCGCGACGGGGGGGAACATCGAGGGGATCGCCAACAAATTCACGGTGCCGCAGCCGGCTATTCGGCGTTCCGGGAGGCCAGCTTTCGGCCAACGCCACGCTGGAGATCAAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTCGCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTATTAATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTATTGCCATTCTTCTTCTTCTTTAGCTTTGGATAATAAATACTCCTACTA]


>consensus_13347#2 ATCCNCGGATTTTGGCCNCNATCCNNGAAAACCAGGANGNGGGGGTTCCACCGTTGCNAA GTACCGGGTTTTGGTNANATTNCGGGAAAANGAAAANACNAAAATGGGGGGGGGAGGGGG TCATTGGGCGGGTTTTTNNANCAGGGGAAGGGGTTCCCGGCNAAATTCNAATTGAGGGCA CCGGGGGTTGGGAAACTGAATAAAAACTTGTGACGGCAAGGGACGCCGGCGGCGAAGTGG ACGCCCCGGTTACATCACGATCGCGACGGGGGGGAACATCGAGGGGATCGCCAACAAATT CACGGTGCCGCAGCCGGCTATTCGGCGTTCCGGGAGGCCAGCTTTCGGCCAACGCCACGC TGGAGATCAAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCA AGGCCGTCGCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATG TATAATTATTAATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTA TTGCCATTCTTCTTCTTCTTTAGCTTTGGATAATAAATACTCCTACTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13347#1      AGAGTAGCACAAGAAGCAGAGTGCGGCTAGCTCACAGTCACCATGGGGATGCTGCGGTGG 60
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      ------------------------------------------------------------
                                                                                   

consensus_13347#1      GGAGCTCACCTCCTCCTCCTCCTCCTCGCCGCGGCGACGTGGACGTGCGCCGGCGCCGGC 120
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      ------------------------------------------------------------
                                                                                   

consensus_13347#1      GCCGGGGTGACGAGCGAGTACCGGCGGAAGCTGGAGGCGACGGTGGACATGCCGCTCGAC 180
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      ------------------------------------------------------------
                                                                                   

consensus_13347#1      GCCGACGTCTTCCGCGTGCCGCCGGGCTACAATGCTCCGCAGCAGGTGCACATCACGCTG 240
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      ------------------------------------------------------------
                                                                                   

consensus_13347#1      GGGGACCAGACGGGGACGGCGATGACGGTGTCGTGGGTGACGGCGAACGAGCTGGGGAGC 300
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      ------------------------------------------------------------
                                                                                   

consensus_13347#1      AACACGGTCAGGTACGGGAGCTCGCCGGAGAAGCTGGACCGCGCGGCGGAGGGGAGCCAC 360
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      ------------------------------------------------------------
                                                                                   

consensus_13347#1      ACGAGGTACGACTACTTCAACTACACCTCCGGCTTCATCCACCACTGCACCCTCACCGGC 420
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      ------------------------------------------------------------
                                                                                   

consensus_13347#1      CTCACCCACGCCACCAAGTACTACTACGCCATGGGCTTCGATCACACCGTCCGTACCTTC 480
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      ------------------------------------------------------------
                                                                                   

consensus_13347#1      TCCTTCACCACGCCGCCCAAGCCCGCTCCCGACGCCCCCTTCAAGTTCGGCCTCATCGGT 540
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      ------------------------------------------------------------
                                                                                   

consensus_13347#1      GACCTCGGGCAGACGTTCGACTCGAACAGCACGCTGGCGCACTACGAGGCCAACGGCGGC 600
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      -----------------------------------------------------CGGCGGC 7
                                                                                   

consensus_13347#1      GACGCCGTCCTCTTCGTCGGCGACCTCTCCTACGCCGACAACTACCCTCTCCACGACAAC 660
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      GACGCGGTGCTGTTCATCGGCGACCTGTCGTACGCGGACAACCACCCGGGGCACGACAAC 67
                                                                                   

consensus_13347#1      AACCGCTGGGACACGTGGGCGCGCTTCGTCGAGCGCAGCGTCGCGTACCAGCCATGGATC 720
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      AACCGGTGGGACACGTGGGCGCGGTTCGTGGAGCGGAGCGTGGCGTACCAGCCGTGGATC 127
                                                                                   

consensus_13347#1      TGGACCGCCGGCAACCACGAGCTGGACTACGCGCCGGAGCTGGGCGAGACGGTCCCCTTC 780
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      TGGACGACGGGGAACCACGAGCTGGACTTCGCGCCGGAGCTGGGGGAGACGACGCCGTTC 187
                                                                                   

consensus_13347#1      AAGCCCTTCACCCACCGGTACCCGACGCCGTACCGCGCCGCCGGCAGCACGGAGCCGTTC 840
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      AAGCCGTTCACGAACAGGTACCCGACGCCGTTCGGGGCGTCGGGGAGCACGCGGCCGCTG 247
                                                                                   

consensus_13347#1      TGGTACTCCGTCAAGATCGCCTCCGCGCACGTCATCGTGCTGGCCTCCTACTCCGCCTAC 900
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      TGGTACTCGGTGAGGATGGCGTCGGCGCACGTGATCGTGCTGGCGTCGTACGCGGCGTAC 307
                                                                                   

consensus_13347#1      GGCAAGTACACGCCGCAGTGGACATGGCTGCAGGAGGAGCTCGCCACCCGCGTCGACCGC 960
consensus_13347#2      -------------------------ATCCNCGGATTTTGGCCNCNATCCNNGAAAACCAG 35
consensus_13347#0      GGCAAGTACACGCCGCAGTGGAGGTGGTTGGAGGGGGAGCT---GAGGCGCGTGGACAGG 364
                                                       *     *      *  *  *   **   

consensus_13347#1      AAGCTCACCCCGTGGCTCATCGTGCTCATGCACTCG-CCGTGGTACAACAGCAACAACTA 1019
consensus_13347#2      GANGNGG----GGGTTCCACCGTTGCNAAGTACCGGGTTTTGGTNANATTNCGGGAAA-A 90
consensus_13347#0      GCGGTGACGCCATGGCTGATCGTGTGCGTGCACTCG-CCGTGGTACAGCAGCAACGGATA 423
                                    *    * ***      * **  *    ****       *       *

consensus_13347#1      CCACTACATGGAGGGGGAGACGATGCGCGTCCAGTTCGAGCGGTGGCTCGTCGACGCCAA 1079
consensus_13347#2      NGAAAANACNAAAATGGGGGGGGGAGGGGGTCA--TTGGGCGG--GTTTTTNNAN--CAG 144
consensus_13347#0      CCACTACATGGAGGGGGAGTCGATGCGCGTGGAGTTCGAGCGGTGGCTCGTCGACGCCAA 483
                         *  * *   *   ** *  *    * *   *  * * ****  * *  *  *   ** 

consensus_13347#1      GGTGGACGTGGTGCTCGCCGGCCACGTCCACTCGTACGAGCGCAGCCGGAGGTTCGCGAA 1139
consensus_13347#2      GG--GAAGGGGTTC---CCGGCNAAATTCNAAT---TGAGGGCA-CCGGGGGTTGGGAAA 195
consensus_13347#0      GGCCGACGTGGTGCTCGCCGGGCACGTCCACTCGTACGAGCGGACGCGGCGGGTGTCGAA 543
                       **  ** * *** *   ****  *  * *        *** * *  *** ** *    **

consensus_13347#1      CATCGACTACAACATCGTGAACGGCAAGGCGACGCCGGCGGCGAACGTGGACGCGCCGGT 1199
consensus_13347#2      C--TGAATAAAAACTTGTGA-CGGCAAGG-GACGCCGGCGGCGAA-GTGGACGCCCCGGT 250
consensus_13347#0      CGTGGCGTACGACATCGCCAACGGGATGGCGACGCCGGTGTTCAACCGGTCGGCGCCGGT 603
                       *   *  **  *  * *  * *** * ** ******** *   **   *   ** *****

consensus_13347#1      GTACATCACGATCGGCGACGGGGGGAACATCGAGGGGATCGCCAACAACTTCACGGTGCC 1259
consensus_13347#2      -TACATCACGATCGCGACGGGGGGGAACATCGAGGGGATCGCCAACAAATTCACGGTGCC 309
consensus_13347#0      GTACATCAACATCGGCGACGGGGGGAACATCGAGGGGCTCGCCGACGACTTCCGGTGGCC 663
                        *******  ****     ****************** ***** ** * ***  *  ***

consensus_13347#1      GCAGCCGGCCTACTCGGCGTTCCGGGAGGCCAGCTT-CGGCCA-CGCCACGCTGGAGATC 1317
consensus_13347#2      GCAGCCGGC-TATTCGGCGTTCCGGGAGGCCAGCTTTCGGCCAACGCCACGCTGGAGATC 368
consensus_13347#0      GCAGCCGGACTACTCGGTGTTCCGGGAGGCCAGCTT-CGGCCA-AGGCACGCTGCAGATC 721
                       ********  ** **** ****************** ******  * ******* *****

consensus_13347#1      AAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTC 1377
consensus_13347#2      AAGAACCGGACGCACGCGCACTACGCGTGGCACCGCAACCACGACGGCGCCAAGGCCGTC 428
consensus_13347#0      GTCAACCGGACGCACGCCTTCTACGAGTGGCACCGCAACAGCGACGGCGTCAAGGTCGTC 781
                          **************   ***** *************  ******** ***** ****

consensus_13347#1      GCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTA 1437
consensus_13347#2      GCCGACGCCGTCTGGCTCACCAACCGCTACTGGATGCCCACCAACGACGATGTATAATTA 488
consensus_13347#0      GCCGACCATGCCTGGTTCACCAACCGATACTGGTTTCCCACCGACACCAACTAGCTACCC 841
                       ******   * **** ********** ****** * ****** **  * *      *   

consensus_13347#1      TTAATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTATTGCCATT 1497
consensus_13347#2      TTAATCGACTCCAACCATCTCAAACTTCTTAATTTGTATCACTGCTATGCTATTGCCATT 548
consensus_13347#0      TTAATTTCCTACGGCCTACTTCCTCTGTCATGTAAAAAACCAATCTATACTAGTATAGGA 901
                       *****   ** *  **  **    **      *    * *    **** *** *      

consensus_13347#1      CTTCTTCTTCTTTAG--CTTTGGATA-ATAAATACTCCTACTATGCAATAACAAATACTA 1554
consensus_13347#2      CTTCTTCTTCTTTAG--CTTTGGATA-ATAAATACTCCTACTA----------------- 588
consensus_13347#0      TATGATATATTCTAGTACTACGAATATAGATATACATCTATTCAGATTCATCGTATAAGA 961
                         *  * *  * ***  **  * *** * * ****  *** *                  

consensus_13347#1      CTAGCAGAGTCTATCTTGTTAAGCCGTGAGATAATTAATCCCCAAA-------------- 1600
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      ATATGTCGCATCCGATTCTAGATTCGTTTTCCGCGGGACGGAGAAAATACCTGCTTAATT 1021
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      TTTTCTTTATTACTAGTACTTTTCTTTTTCTAGATTTCGACCTGAATTCTATTTAGTACG 1081
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      AATGCATCAACAGCAAAACAGATTAGCACACTAGAGAGGGAGATGGATTAATAAAATCAT 1141
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      TCGGTTCTGTTTGGAGTTTGCTAGTATAATATATTCTTGGTTCTGTTTGGAGTTTGCTAT 1201
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      AATATATTCTTTCTTGACGAATTATCTCCATTCGTAAGCGTGCGTTATCCTCGCCTCAAC 1261
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      TAATATTGGAATTACAGTTCTTCTGTCCAGAATAGTAGCTTGGCTATCCCTTTGTCTTTT 1321
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      GCTCTGCCGAATAAAACAGCAACTGCAGTTGTTACACAATTTTTCTAAAAAAATCTTAGT 1381
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      CCAAATTCCGAAACAATTCATTCTACTACTTGGGACCTGGGAGTGGAAAAGCAGTTCTGA 1441
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      CTGAATAATTCATACGCGTGATAAATTGGGATATTGAGAGCCGTATAGCGAATCAGAATT 1501
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      TTGATATAACGTACTGAATGAACAAGAATGACCTCTGTATTGGGCATATCCGCATATGGC 1561
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      AATTTGTCGACCATCATGGAACAGTTTGATCAAGTTGATGGCATGCGTTTTTAGAGAAAG 1621
                                                                                   

consensus_13347#1      ------------------------------------------------------------
consensus_13347#2      ------------------------------------------------------------
consensus_13347#0      TTGATGCAATGCACTGGAAATGTAATGTTGTACTCCAAACAGAATTGGGCAAGCCCTGAT 1681
                                                                                   

consensus_13347#1      -------------
consensus_13347#2      -------------
consensus_13347#0      ATGCTATTCCGCC 1694
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)