These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13358#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1503 fasta sequence [ACCTCTCACTACCTCAGTTAGCTCAGTAGCACAGCTCACCTCGGCTGTCCGAATCGAGAGGCACGGCCATGGAGAAGCCGACGAAGAAGGGGGTGGCGCCGCCGATGG-GTGGCGGACGCGCCTCTCCATCCTCGCCGCGGGGTGCCTCACCGACGCCACGTGCCGCGCCGACGGCACCATCAACCGCCGCCTCCTAAACTTCCTCGACCCGCACGTCCCGCCCTCCGCCGCGCCGCGCAACGGCGTCGCGTCGCGCGACGT-CGTCGTCGACCCGGCGATCCCGCTCCGCGCCCGCCTCTTCTACCCCTGCCCCTCCGGAGGAGACGGCGGCACCGGCGACGCGACGAAGCCGCTGCCCGTCGTGGTGTTCTTCCACGGC-GGCGGGTTCGCGTACCTGTCCGCGGCGTCGCGCGCCTACGACGCCGCGTGCCGACGCATCGCCAGGTACGCCGGCGCGGCCGTGCTGTCCGTCGACTACCGCCGCTCGCCGGAGCACCGCTACCCGACGCCCTACGACGACGGCCTCGCCGCGCTCCGCTTCCTCGACGACCCCAACAACCACCCCCTCGCCGCCGACGACGGCGACGTTCCACCACTCGACGTCACCCGCTGCTTCGTCGCCGGGGACAGCGCGGGCGCCAACATCGCGCACCACGTCGCCCGCCGCTACGCCCTCGCCTCCACCACCTTCGCCAACCTCCGCCTCGCCGGCCTCATCGCCATCCAGCCATTCTTCGGCGGCGAGGAGCGCACCCCCGCCGAGCTCCGCCTCGTCGGCGCGCCCATCGTCTCCGTCCCGCGCACCGACTGGCTCTGGCGCGCGTTCCTCCCGCCCGGCGCCGACCGCACCCACGAGGCCGCGCACGCGGCCTCCCCCGCCGGCGCCGCCGGCATTGACTCCCCGGCGTTCCCTCCGGCCACGGTGGTGATCGGCGGCTACGACCCGCTCCAGGACTGGCAGCGCCGCTACTGCGA-GACGCTCCGCGGGAAGGGGAAGGCGGTGCGCGTGCTGGACTACCCCGACGCCATCCACGCCTTCTACATCTTCCCGGAGTTCGCCGAGGCGCGCGACCTCATGCTCCGGATCAAGGACATCGTCGCCGGCGGCGGCGGCGAGCA-CTGACTGGTCGGCGTCGCAGTGCACGACACGAGCACGAGCAGTACTGTGGTTGGTTGGTGGTG-GTGAGTGAGTGATTGGGGTGGGGTTGCGTGATGGGGGTGGTGAGTGATGACGTGGACTGATTAGGCGAGATGC-CACGTATTGTAGCTATCACTAGGCACTAGTGAGCTTATCCAGTAGTAAGATGACACGTGGGACTTGTGTTGGTC-GCATATGTTATACTGCATGGTGTAGGATGAGGTCGTCAATAATTTGTTAGGAGTAAAAAGTAGAGGC---CACCAATAAAATGGGATTTATGGTTTTAGATAAAAAAAAAAGGCTTTTCTAATTTACTTTGTTTTAGGCTGTAGGGAGTTCATACTAAAATTGAAAGTTTGGTGAAA] [+] EMBL AK061589 [ACCTCTCACTACCTCAGTTAGCTCAGTAGCACAGCTCACCTCGGCTGTCCGAATCGAGAGGCACGGCCATGGAGAAGCCGACGAAGAAGGGGGTGGCGCCGCCGATGGCGTGGCGGACGCGCCTCTCCATCCTCGCCGCGGGGTGCCTCACCGACGCCACGTGCCGCGCCGACGGCACCATCAACCGCCGCCTCCTAAACTTCCTCGACCCGCACGTCCCGCCCTCCGCCGCGCCGCGCAACGGCGTCGCGTCGCGCGACGT CGTCGTCGACCCGGCGATCCCGCTCCGCGCCCGCCTCTTCTACCCCTGCCCCTCCGGAGGAGACGGCGGCACCGGCGACGCGACGAAGCCGCTGCCCGTCGTGGTGTTCTTCCACGGC GGCGGGTTCGCGTACCTGTCCGCGGCGTCGCGCGCCTACGACGCCGCGTGCCGACGCATCGCCAGGTACGCCGGCGCGGCCGTGCTGTCCGTCGACTACCGCCGCTCGCCGGAGCACCGCTACCCGACGCCCTACGACGACGGCCTCGCCGCGCTCCGCTTCCTCGACGACCCCAACAACCACCCCCTCGCCGCCGACGACGGCGACGTTCCACCACTCGACGTCACCCGCTGCTTCGTCGCCGGGGACAGCGCGGGCGCCAACATCGCGCACCACGTCGCCCGCCGCTACGCCCTCGCCTCCACCACCTTCGCCAACCTCCGCCTCGCCGGCCTCATCGCCATCCAGCCATTCTTCGGCGGCGAGGAGCGCACCCCCGCCGAGCTCCGCCTCGTCGGCGCGCCCATCGTCTCCGTCCCGCGCACCGACTGGCTCTGGCGCGCGTTCCTCCCGCCCGGCGCCGACCGCACCCACGAGGCCGCGCACGCGGCCTCCCCCGCCGGCGCCGCCGGCATTGACTCCCCGGCGTTCCCTCCGGCCACGGTGGTGATCGGCGGCTACGACCCGCTCCAGGACTGGCAGCGCCGCTACTGCGA GACGCTCCGCGGGAAGGGGAAGGCGGTGCGCGTGCTGGACTACCCCGACGCCATCCACGCCTTCTACATCTTCCCGGAGTTCGCCGAGGCGCGCGACCTCATGCTCCGGATCAAGGACATCGTCGCCGGCGGCGGCGGCGAGCA CTGACTGGTCGGCGTCGCAGTGCACGACACGAGCACGAGCAGTACCGTGGTTGGTTGGTGGTG GTGAGTGAGTGATTGGGGTGGGGTTGCGTGATGGGGGTGGTGAGTGATGACGTGGACTGATTAGGCGAGATGC CACGTATTGTAGCTATCACTAGGCACTAGTGAGCTTATCCAGTAGTAAGATGACACGTGGGACTTGTGTTGGTC GCATATGTTATACTGCATGGTGTAGGATGAGGTCGTCAATAATTTGTTAGGAGTAAAAAGTAGAGGC CACCAATAAAATGGGATTTAT ] [+] EMBL AU064937 [ AGTTAGCTCAGTAGCACAGCTCACCTCGGCTGTCCGAATCGAGAGGCACGGCCATGGAGAAGCCGACGAAGAAGGGGGTGGCGCCGCCGATGG GTGGCGGACGCGCCTCTCCATCCTCGCCGCGGGGTGCCTCACCGACGCCACGTGCCGCGCCGACGG ACCATCAACCGCCGNCTCCTAAACTTCCTCGACCCGCACGTCCCGCCCTNCGCCGCGCCGNGCAACGG GTCGCGTCG GCGA GT CGTCGTCGACCCGGCGATCCCGCTCCG GCCCGNCTCTTCTACCNCTGCCCCTTCGGA GAGACGGCGG AACGGCGACGCGACGAAGCCGNTGCCCGTCGTGGTGTTNTTCCACGG ] [+] EMBL AU063777 [ AGTTAGCTCAGTAGCACAGCTCACCTCGGCTGTCCGAATCGAGAGGCACGGCCATGGAGAAGCCGACGAAGAAGGGGGTGGCGCCGCCGATGG GTGGCGGACGCGCCTCTCCATCCTCGCCGCGGGGTGCCTCACCGACGCCACGTGCCGCGCCGACGGCACCATCAACCGCCGCCTCCTAAACTTCCTCGACCCGCACGTCCCGCCCTCCGCCGCGCCGCGCAACGGCGTCGCGTCGCGCGA GTNCGTCGTCGACCCGGCGATCCCGCTCCGCGCCCGCCTCTTCTACCCCTGCCCCTCCGGAGGAGACGGCGGCACCGGCGACGCGACGAAGCCGCTGCCCGTCGTGGTGTTCTTCCACGGCGGGCGGGTTCGCGTACCTGTCNGCGGCGTCGCGCGGCTACGAAGGCGCGTGCC ] [+] EMBL AU070106 [ AGTTAGCTCAGTAGCACAGCTCACCTCGGCTGTCCGAATCGAGAGGCACGGCCATGGAGAAGCCGACGAAGAAGGGGGTGGCGCCGCCGATGG GTGGCGGACGCGCCTCTCCATCCTCGCCGCGGGGTGCCTCACCGACGCCACGTGCCGCGCCGACGG ACCATCAACCGCCGCCTCCTAAACTTCCTCGACCCGCACGTCCCGNCCTNCGACGCGCCG GCAACGG GTCGCGTCG GCGAGTT CGTCGTCGACCCGGCGATCCCG TTCG GCCCGCCTCTTCTA CCCTG CCCTTCGGAG GACGGCGG AACGGCGACGCGACGAAGNCGTTGCCCGTCGTGGTGTT TTTCACG ] [+] EMBL CB677993 [ GTACCTCAGCTCACCTCGGCTGTCCGAATCGAGAGGCACGGCCATGGAGAAGCCGACGAAGAAGGGGGTGGCGCCGCCGATGGCGTGGCGGACGCGCCTCTCCATCCTCGCCGCGGGGTGCCTCACCGACGCCACGTGCCGCGCCGACGGCACCATCAACCGCCGCCTCCTAAACTTCCTCGACCCGCACGTCCCGCCCTCCGCCGCGCCGCGCAACGGCGTCGCGTCGCGCGACGT CGTCGTCGACCCGGCGATCCCGCTCCGCGCCCGCCTCTTCTACCCCTGCCCCTCCGGAGGAGACGGCGGCACCGGCGACGCGACGAAGCCGCTGCCCGTCGTGGTGTTCTTCCACGGC GGCGGGTTCGCGTACCTGTCCGCGGCGTCGCGCGCCTACGACGCCGCGTGCCGACGCATCGCCAGGTACGCCGGCGCGGCCGTGCTGTCCGTCGACTACCGCCGCTCGCCGGAGCACCGCTACCCGACGCCCTACGACGACGGCCTCGCCGCGCTCCGCTTCCTCGACGACCCCAACAACCACCCCCTCGCCGCCGACGACGGCGACGTTCCACCACTCGACGTCACCCGCTGCTTCGTCGCCGGGGACAGCGCGGGCGCCAACATCGCGCACCACGTCGCCCGCCGCTACGCCCTCGCCTCCACCACCTTCGCCAACCTCCGCCTCGCCGGCCTCATCGCCATCCAGCCATTCTTCGGCGGCGAGGAGCGCACCCCCGCCGAGCTCCGCCTCGTCGGCGCGCCCATCGTCTCCGTCCCGCGCACCGACTGGCTCT ] [+] EMBL AK120858 [ CTCTCCATCCTCGCCGCGGGGTGCCTCACCGACGCCACGTGCCGCGCCGACGGCACCATCAACCGCCGCCTCCTAAACTTCCTCGACCCGCACGTCCCGCCCTCCGCCGCGCCGCGCAACGGCGTCGCGTCGCGCGACGT CGTCGTCGACCCGGCGATCCCGCTCCGCGCCCGCCTCTTCTACCCCTGCCCCTCCGGAGGAGACGGCGGCACCGGCGACGCGACGAAGCCGCTGCCCGTCGTGGTGTTCTTCCACGGC GGCGGGTTCGCGTACCTGTCCGCGGCGTCGCGCGCCTACGACGCCGCGTGCCGACGCATCGCCAGGTACGCCGGCGCGGCCGTGCTGTCCGTCGACTACCGCCGCTCGCCGGAGCACCGCTACCCGACGCCCTACGACGACGGCCTCGCCGCGCTCCGCTTCCTCGACGACCCCAACAACCACCCCCTCGCCGCCGACGACGGCGACGTTCCACCACTCGGCGTCACCCGCTGCTTCGTCGCCGGGGACAGCGCGGGCGCCAACATCGCGCACCACGTCGCCCGCCGCTACGCCCTCGCCTCCACCACCTTCGCCAACCTCCGCCTCGCCGGCCTCATCGCCATCCAGCCATTCTTCGGCGGCGAGGAGCGCACCCCCGCCGAGCTCCGCCTCGTCGGCGCGCCCATCGTCTCCGTCCCGCGCACCGACTGGCTCTGGCGCGCGTTCCTCCCGCCCGGCGCCGACCGCACCCACGAGGCCGCGCACGCGGCCTCCCCCGCCGGCGCCGCCGGCATTGACTCCCCGGCGTTCCCTCCGGCCACGGTGGTGATCGGCGGCTACGACCCGCTCCAGGACTGGCAGCGCCGCTACTGCGA GACGCTCCGCGGGAAGGGGAAGGCGGTGCGCGTGCTGGACTACCCCGACGCCATCCACGCCTTCTACATCTTCCCGGAGTTCGCCGAGGCGCGCGACCTCATGCTCCGGATCAAGGACATCGTCGCCGGCGGCGGCGGCGAGCA CTGACTGGTCGGCGTCGCAGTGCACGACACGAGCACGAGCAGTACTGTGGTTGGTTGGTGGTG GTGAGTGAGTGATTGGGGTGGGGTTGCGTGATGGGGGTGGTGAGTGATGACGTGGACTGATTAGGCGAGATGC CACGTATTGTAGCTATCACTAGGCACTAGTGAGCTTATCCAGTAGTAAGATGACACGTGGGACTTGTGTTGGTC GCATATGTTATACTGCATGGTGTAGGATGAGGTCGTCAATAATTTGTTAGGAGTAAAAAGTAGAGGC CACCAATAAAATGGGATTTAT ] [+] EMBL CB684433 [ GTCGCGCGCCTACGACGCCGCGTGCCGACGCTTCCCCTGGTACGCCGGCGCGGCCGTGCTGTCCGTCGACTACCGCCGCTCGCCGGAGCACCGCTACCCGACGCCCTACGACGACGGCCTCGCCGCGCTCCACTTCCTCGACGACCCCAACGAGCACCCCCTCGCCGCCGACGACGGCGACGTTCCACCACTCGACGTCACCCGCTGCTTCGTCGCCGGGGACAGCGCGGGCGCCAACATCGCGCACCACGTCGCCCGCCGCTACGCCCTCGCCTCCACCACCTTCGCCAACCTCCGCCTCGCCGGCCTCATCGCCATCCAGCCATTCTTCGGCGGCGAGGAGCGCACCCCCGCCGAGCTCCGCCTCGTCGGCG ] [-] EMBL CB677994 [ CGCCGCCGGCATTGACTCCCCGGCGTTCCCTCCGGCCACGGTGGTGATCGGCGGCTACGACCCGCTCCAGGACTGGCAGCGCCGCTACTGCGA GACGCTCCGCGGGAAGGGGAAGGCGGTGCGCGTGCTGGACTACCCCGACGCCATCCACGCCTTTTACATCTTCCCGGAGTTCGCCGAGGCGCGCGACCTCATGCTCCGGATCAAGGACATCGTCGCCGGCGGCGGCGGCGAGCA CTGACTGGTCGGCGTCGCAGTGCACGACACGAGCACGAGCAGTACTGTGGTTGGTTGGTGGTG GTGAGTGAGTGATTGGGGTGGGGTTGCGTGATGGGGGTGGTGAGTGATGACGTGGACTGATTAGGCGAGATGC CACGTATTGTAGCTATCACTAGGCACTAGTGAGCTTATCCAGTAGTAAGATGACACGTGGGACTTGTGTTGGTC GCATATGTTATACTGCATGGTGTAGGATGAGGTCGTCAATAATTTGTTAGGAGTAAAAAGTAGAGGC CACCAATAAAATGGGATTTATGGTTTTAGATAACTGAAAGTGGCTTTTCTAATTTACTTTGTTTTAGGCTGTAGGGAGTTCATACTAAAATTGAAAGTTTGGTGAAA] [-] EMBL CB684434 [ CGCCGCCGGCATTGACTCCCCGGCGTTCCCTCCGGCCACGGTGGTGATCGGCGGCTACGACCCGCTCCAGGACTGGCAGCGCCGCTACTGCGA GACGCTCCGCGGGAAGGGGAAGGCGGTGCGCGTGCTGGACTACCCCGACGCCATCCACGCCTTTTACATTTTCCCGGAGTTCGCCGAGGCGCGCGACCTCATGCTCCGGATCAAGGACATCGTCGCCGGCGGCGGCGGCGAGCA CTGACTGGTCGGCGTCGCAGTGCACGACACGAGCACGAGCAGTACTGTGGTTGGTTGGTGGTG GTGAGTGAGTGATTGGGGTGGGGTTGCGTGATGGGGGTGGTGAGTTATGACGTGGACTGATTAGGCGAGATGC CACGTATTGTAGCTATCACTAGGCACTAGTGAGCTTATCCAGTAGTAAGATGACACGTGGGACTTGTGTTGGTC GCATATGTTATACTGCATGGTGTAGGATGAGGTCGTCAATAATTTGTTAGGAGTAAAAAGTAGAGGC CCCCAATAAAATGGGATTTATG ] [+] EMBL AU165335 [ ATTGACTCCCCGGCGTTCCCTCCGGCCACGGTGGTGATCGGCGGCTACGACCCGCTCCAGGACTGGCAGCGCCGCTACTGCGAGGAC CTCCGCGGGAAGGGGAAGGCGGTGCGCGTGCTGGACTACCCCGACGCCATCCACGCCTTCTACATCTTCCCGGAGTTCGCCGAGGCGCGCGACCTCATGCTCCGGATCAAGGACATCGTCGCCGGCGGCGGCGGCGAGCA CTGACTGGTCGGCGTCGCAGTGCACGACACGAGCACGAGCAGTACTGTGGTTGGTTGGTGGTG GTGAGTGAGTGATTGGGGTGGGGTTGCGTGATGGGGGTGGTGAGTGATGACGTGGACTGATTAGGCGAGATGC CACGTATTGTAGCTATCACTAGGCACTAGTGAGCTTATCCAGTAGTAAGATGACACGTGGGACTTGTGTTGGTC GCATATGTTATACTGCATGGTGTAGGATGAGGTCGTCAATAATTTGTTAGGAGTAAAAAGTAGAGGC CACCAATAAAATGGGATTTATGGTTTTAGATAAAAA ] [+] EMBL BI808954 [ TCGCCGGTTACGACCCGCTCCAGGACT GCAGCGCCGCTACTGCGA GACGCTCCCCGGGAAGGGGAAGCCGGTGCGCGTGCTGGACTACCCCGACGCCATCCACGCCTTCTACATCTTCCCGGAGTTCGCCGAGGCGCGTGACCTCATGCTCCGGATCAAGGACATCGTCGCCGGCGGCGGCGGCGAGCACCTGACTGGTCGGCGTC CAGTGCACGACACGAGCACGAGCAGTACTGTGGTTGGTTGGTGGTG GTGAGTGAGTGATTGGGGTGGGGTTGCGTGATGGGGGTGGTGAGTGATGACGTGGACTGATTAGGCGAGATGC CACGTACTGTAGCTATCACTAGGCACTAGTGAGCTTATCCAGTAGTAAGATGACACGTGGGACTTGTGTTGGTC GCATATGTTGTACTGCATGGTGTAGGATGAGGTCGTCAATAATTTGTTAGGAGTAAAAAGTAGAGGC CACCAATTAAATGGGATTTATGGTTTTAGATAAAAAAAAAA ] [-] EMBL CB637727 [ CCCGCTCCAGGACTGGCAGCGCCGCTACTGCGA GACGCTCCGCGGGAAGGGGAAGGCGGTGCGCGTGCTGGAATACCCCGACGCCATCCACGCCTTTTACATCTTCCCGGAGTTCGCCGAGGCGCGCGACCTCATGCTCCGGATCAAGGACATCGTCGCCGGCGGCGGCGGCGAGCA CTGACTGGTCGGCGTCGCAGTGCACGACACGAGCACGAGCAGTACTGTGGTTGGTTGGTGGTG GTGAGTGAGTGATTGGGGTGGGGTTGCGTGATGGGGGTGGTGAGTGATGACGTGGACTGATTAGGCGAGATGC CACGTATTGTAGCTATCACTAGGCACTAGTGAGCTTATCCAGTAGTAAGATGACACGTGGGACTTGTGTTGGTC GCATATGTTATACTGCATGGTGTAGGATGAGGTCGTCAATAATTTGTTAGGAGTAAAAAGTAGAGGC CACCAATAAAATGGGATTTATG ] [+] EMBL BI808992 [ GTGTGTGATTGA TGATT GGGT GGGTTGC TGAT GGGGTGGTGAGTGATGACGTGGACTGATTAGGCGAGATGCACACGTACTGTAGCTATCACTAGGCACTAGTGAGCTTATCCAGTAGTAAGATGACACGTGGGACTTGTGTTGGTCAGCATATGTTGTACTGCATGGTGTAGGATGAGGTCGTCAATAATTTGTTAGGAGTAAAAAGTAGAGGCCAACACAAATAAAATGGGATTTATGGTTTTAGATAAAAAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||