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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13363#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1875 fasta sequence
[GAACAGGGAGCTAGCTAGACTTGGCACAGCACATCATCATCAGTAGCACAGCACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG-TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGCGCCGAC-TACATACAG-TGGAGGCTCT--CCGGCTCGGTCGCCGGCGTGCTGCAGCCGGCCGACGACGTGCCGGTGTCAACTAACTACGAACAGCAGTCCATAGAAGGAGATCTTAACTATGGCACGTACTACCCTGCACCTGCACCAATGTCATCAAAGGCGATGAATCCGGCCGCCACCGGCGGCGGCGGCGGCGGGCCGGGAGTGACCCAGACGATGGTGCTGGACACGGCGAGCGACGTGACATGGGTGCAGTGCTCGCCGTGCCCCACGCCGCCGTGCTACCCGCAAAAGGACGTCCTCTACGACCCCACCAAGTCGTCGTCGTCCGGCGTCTTCTCCTGCAACTCGCCGACGTGCACCCAGCTCGGCCCCTACGCCAATGGCTGCACCAACAATAACCAGTGCCAGTACCGCGTCCGGTACCCCGACGGCACGTCGACGGCGGGCACCTACATCTCCGACCTGCTGACCATCACCCCCGCCACCGCAGTCAGGAGCTTCCAGTTCGGCTGCAGCCACGGCGTGCAGGGCAGCTTCAGCTTCGGCAGCAGCGCCGCCGGGATCATGGCACTCGGCGGCGGGCCGGAGTCACTGGTGTCGCAGACGGCGGCGACCTACGGCCGCGTCTTCTCCCACTGCTTCCCGCCGCCGACGCGCCGGGGATTCTTCACCCTCGGCGTGCCGAGGGTGGCCGCCTGGAGGTACGTGCTGACGCCGATGCTCAAGAACCCGGCCATCCCGCCCACGTTCTACATGGTGCGCCTCGAGGCCATCGCCGTCGCCGGGCAGCGGATCGCCGTGCCGCCCACCGTGTTCGCCGCCGGCGCCGCGCTCGACTCCCGCACCGCCATCACCAGGCTGCCGCCGACGGCGTACCAGGCGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGCTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGAGGATCACGCTTGTGTTCGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGCTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTCTACAACATCCCCGCCGCCCTCGTCGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG-CTGGCGT-CATGTATGAGCCAGATTAGCGGTTGCTTT-GATATGTACTCTTCCATCCATGTGGG----TATATATATATATATATATATATATATATATATATATATATAT--GCACGAAGAAATAAAACTTAATTTGTTTGCCTATTAAAAA]
[+] EMBL AK120738 [GAACAGGGAGCTAGCTAGACTTGGCACAGCACATCATCATCAGTAGCACAGCACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGCGCCGAC TACATACAG TGGAGGCTCT CCGGCTCGGTCGCCGGCGTGCTGCAGCCGGCCGACGACGTGCCGGTGTCAACTAACTACGAACAGCAGTCCATAGAAGGAGATCTTAACTATGGCACGTACTACCCTGCACCTGCACCAATGTCATCAAAGGCGATGAATCCGGCCGCCACCGGCGGCGGCGGCGGCGGGCCGGGAGTGACCCAGACGATGGTGCTGGACACGGCGAGCGACGTGACATGGGTGCAGTGCTCGCCGTGCCCCACGCCGCCGTGCTACCCGCAAAAGGACGTCCTCTACGACCCCACCAAGTCGTCGTCGTCCGGCGTCTTCTCCTGCAACTCGCCGACGTGCACCCAGCTCGGCCCCTACGCCAATGGCTGCACCAACAATAACCAGTGCCAGTACCGCGTCCGGTACCCCGACGGCACGTCGACGGCGGGCACCTACATCTCCGACCTGCTGACCATCACCCCCGCCACCGCAGTCAGGAGCTTCCAGTTCGGCTGCAGCCACGGCGTGCAGGGCAGCTTCAGCTTCGGCAGCAGCGCCGCCGGGATCATGGCACTCGGCGGCGGGCCGGAGTCACTGGTGTCGCAGACGGCGGCGACCTACGGCCGCGTCTTCTCCCACTGCTTCCCGCCGCCGACGCGCCGGGGATTCTTCACCCTCGGCGTGCCGAGGGTGGCCGCCTGGAGGTACGTGCTGACGCCGATGCTCAAGAACCCGGCCATCCCGCCCACGTTCTACATGGTGCGCCTCGAGGCCATCGCCGTCGCCGGGCAGCGGATCGCCGTGCCGCCCACCGTGTTCGCCGCCGGCGCCGCGCTCGACTCCCGCACCGCCATCACCAGGCTGCCGCCGACGGCGTACCAGGCGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGCTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGAGGATCACGCTTGTGTTCGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGCTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTCTACAACATCCCCGCCGCCCTCGTCGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCATCCATGTGGG TATATATATATATATATATATATATATATATATATATATATAT GCACGAAGAAATAAAACTTAA ]
[+] EMBL AK068441 [ GCACATCATCATCAGTAGCACAGCACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGCGCCGAC TACATACAG TGGAGGCTCT CCGGCTCGGTCGCCGGCGTGCTGCAGCCGGCCGACGACGTGCCGGTGTCAACTAACTACGAACAGCAGTCCATAGAAGGAGATCTTAACTATGGCACGTACTACCCTGCACCTGCACCAATGTCATCAAAGGCGATGAATCCGGCCGCCACCGGCGGCGGCGGCGGCGGGCCGGGAGTGACCCAGACGATGGTGCTGGACACGGCGAGCGACGTGACATGGGTGCAGTGCTCGCCGTGCCCCACGCCGCCGTGCTACCCGCAAAAGGACGTCCTCTACGACCCCACCAAGTCGTCGTCGTCCGGCGTCTTCTCCTGCAACTCGCCGACGTGCACCCAGCTCGGCCCCTACGCCAATGGCTGCACCAACAATAACCAGTGCCAGTACCGCGTCCGGTACCCCGACGGCACGTCGACGGCGGGCACCTACATCTCCGACCTGCTGACCATCACCCCCGCCACCGCAGTCAGGAGCTTCCAGTTCGGCTGCAGCCACGGCGTGCAGGGCAGCTTCAGCTTCGGCAGCAGCGCCGCCGGGATCATGGCACTCGGCGGCGGGCCGGAGTCACTGGTGTCGCAGACGGCGGCGACCTACGGCCGCGTCTTCTCCCACTGCTTCCCGCCGCCGACGCGCCGGGGATTCTTCACCCTCGGCGTGCCGAGGGTGGCCGCCTGGAGGTACGTGCTGACGCCGATGCTCAAGAACCCGGCCATCCCGCCCACGTTCTACATGGTGCGCCTCGAGGCCATCGCCGTCGCCGGGCAGCGGATCGCCGTGCCGCCCACCGTGTTCGCCGCCGGCGCCGCGCTCGACTCCCGCACCGCCATCACCAGGCTGCCGCCGACGGCGTACCAGGGGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGCTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGATGATCACGCTTGTGTTCGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGCTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTCTACAACATCCCCGCCGCCCTCGTCGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCATCCATGTGGGTATATATATATATATATATATATATATATATATATATATATATATAT GCACGAAGAAATAAAACTTAATTTG ]
[+] EMBL OSS11328A [ AGTAGCACAGCACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGGCGTTCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGGGNCGACTTACATACAG TGGAGGTTTTTNCGGGTTCGGT ]
[+] EMBL C93589 [ AGCACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTCCTGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAG CAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCG CG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCG GNCGAC TACATACAGTTGGAGGCTCT CCGGCTCGGTCGCC GCGTGCTTCAGCC GCCGACGACGTGCCGTTNTCAACTAACTACGANCAGCAGTCCATAGAAGGAGATCTTAA TATtgga ]
[+] EMBL OSS1350A [ CACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAG ]
[+] EMBL CB639017 [ GAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGCGCCGAC TACATACAG TGGAGGCTCT CCGGCTCGGTCGCCGGCGTGCTGCATCCGGCCGACGACGTGCCGGTGTCAACTAACTACGAACAGCAGTCCATAGAACGAGATCTTAACTATGGCACGTACTACCCTGCA ]
[+] EMBL OSS11894A [ AGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGNTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGNGCCGAC TACATACAG ]
[+] EMBL CB684399 [ GCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGCGCCGAC TACATACAG TGGAGGCTCT CCGGCTCGGTCGCCGGCGTGCTGCAGCCGGCCGACGACGTGCCGGTGTCAACTAACTACGAACAGCAGTCCATAGAAGGAGATCTTAACTATGGCACGTACTACCCTGCACCTGCACCAATGTCATCAAAGGCGATGAATCCGGCCGCCACCGGCGGCGGCGGCGGCGGGCCGGGAGTGACCCAGACGATGGTGCTGGACACGGCGAGCGACGTGACATGGGTGCAGTGCTCGCCGTGCCCCACGCCGCCGTGCTACCCGCAAAAGGACGTCCTCTACGACCCCACCAAGTCGTCGTCGTCCGGCGTCTTCTCCTGCAACTCGCCGACGTGCACCCAGCTCGGCCCCTACGCCAATGGCTGCACCAACAATAACCAGTGCCAGTACCGCGTCCGGTACCCCGACGGCACGTCGACGGCGGGCACCTACATCTCCGACCTGCTGACCATCACCCCCGCCACCGCAGTCAGGAGCTTCCAGTTCGGCTGCAGCCACGGCGTGCAGGGCAGCTTCAGCTTCGGCAGCAGCGCCGCCGGGATCATGGCACTCGGCGGCGGGCCGGAGTCACTGGTGTCGCAGACGGCGGCGACCTACGGCCGCGTCTTCTCCCACTGC ]
[+] EMBL CB675670 [ CTTCACCCTCGGCGTGCCGAGGGTGGCCGCCTGGAGGTACGTGCTGACGCCGATGCTCAAGAACCCGGCCATCCCGCCCACGTTCTACATGGTGCGCCTCGAGGCCATCGCCGTCGCCGGGCAGCGGATCGCCGTGCCGCCCACCGTGTTCGCCGCCGGCGCCGCGCTCGACTCCCGCACCGCCATCACCAGGCTGCCGCCGACGGCGTACCAGGCGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGCTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGAGGATCACGCTTGTGTTCGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGCTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTCTACAACATCCCCGCCGCCCTCGTCGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCAATCATGTGGG TATATATATATATATATATATA ]
[-] EMBL CB675671 [ AAGAACCCGGCCATCCCGCCCACGTTTTACATGGTGCGCCTCGAGGCCATCGCCGTCGCCGGGCAGAGGATCGCCGTGCCGCCCACCGTGTTCGCCGCCGGCGCCGCGCTCGACTCCCGCACCGCCATCACCAGGGTGCCGCCGACGGCGTACCAGGCGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGCTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGAGGATCACGCTTGTGTTCGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGGTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTCTACAACATCCCCCCCGCCCTCGTGGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCATCCATGTGGG TATATATATATATATATATATATATATATATATATATATATATAGGCACGAAGAAATAAAACTTAATTTGTTTGCCTA ]
[-] EMBL CB684400 [ TCACCAGGGTGCCGCCGACGGCGTACCAGGCGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGTTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGAGGATCACGCTTGTGTTTGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGGTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTTTACAACATCCCCGCCGCCCTCGTCGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCATCCATGTGGG TATATATATATATATATATATATATATATATATATATATATAT GCACGAAGGAATAAAACTTAATTTGTTTGCCTATTAAAAA]
[+] EMBL AU091859 [ CGTCTCGATCGGGACTNTACTACTACAGGCCGGAGCTGCTCTTGNTCCGGTGATACCTTTTAATTTTCATAAAGNTCGNGCGCTCGCGTCTTTANTTTGATNCCNCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCATCCATGTGGGTATATATATATATATATATATATATATATATATATATATATATATAT GCACGAAGAAATAAAACTTAATTTGTTTGCCaaaaa ]
[+] EMBL AU095866 [ TACACGTGCTACAAGATCAGCTGGNCTGGCGTNCATGTATGAGCCAGATTAGCGGTTGCTTTNGATATGTACTCTTCCATCCATGTGGGTATATATATATATATATATATATATATATATATATATATATATATAT GCACGAAGAAATAAAACTTAATTTGTTTGCCTA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||