These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13389#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1699 fasta sequence [CGCACCCGCACTCCAACCAGCGCGA-CGGCGTCCTCCTCCTCCGTCGGCGTCGGCGGCGGCGGCGACGGCCATGGACTTCGGGTACGTCGGCGTGGGGCAGGGGAGCTCGTCGTCGTCGTCGTCGGCGTCGTGCCGAGCGGCGGACGTGGCGGCGTGGGGATCCTCCACCCAGCAGCAGCAGAAGCGGCAGCGGTGCCAGGGTTCTTCTGATGACCAAGTTGGATTGAGCACAAGTAATTCTTTGCAAATGTCAGAACCAGAGCCTCGAGATTTTGATAATGGAGAAAATGAGGAAGAAGATTAC-TATCTGGACGAGGACGATTGC-ATTTATGATGATGGCGATGGATATGATTATGAA-TTTGATGGCGGTGACTAC-TTCAACCAACGTC-TTGCTGATAAA-TTTGATGATTTGGATTTGCCTCCAGGCGTGGAGGCTACTGTACCTTGGCTTCAGAAAATTATAACTAACGAAGAGCAAAGCAGTTCCAAATTGACAGTTGAAGATGAAAGCGCAAATAAAAGTGCAAATAAATCTCAGTTGTTCAAACAGTTTGACACTGTTAAAAATTTCTCTGATCATCATTATGCAGCAACATCAGGGGATGTGACAAAGAGAGACTGGGTGAAGAGGATTCAGCATGACTGGAAACTTTTGGAGAAAGATCTACCAGCATCTATTTATGTCCGTGTTGCTGAAGATAGAATGGACCTTCTTAGGGCTGCTATTATCGGACCTAAGGGAACACCGTACCACGATGGGCTCTTCTTCTTTGATATTCAATTTAGTAACTCTTACCCTGCTAATCCTCCATCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAATAATGGAAAAGTATGCCTTAGTCTTCTTGGTACCTGGGCAGGTAGTGGTTGTGAGACGTGGAATCCATCTCAGTCGACCATGCTACAAGTGCTCGTCT-CCATTCAAGCTCTCATTTTGAATGAGAAGCCCTACTTCAATGAGCCAGGATATGCATCCTACGCCAATAGTGTATCTGGAGAGCGGATTGCTATGGAGTATAACGACAACACATTTCTGCACTCATGCAGGACGATGCTCTACTCACTTCGGCGGCCTCCAGAGCACTTCGCAGACCTTGTTACCAGCCACTTCAGGGAGCGCGGGCACACCATCCTGGCAGCATGCAGGTACTACATGGAAGGCCACAAGGTCGGATCG-GTGGTCCCCGAAGA-GAAGGAGCCGGAGTACGGC-GACGCGGGAGCATCCACCAGCAGCGCCAGCGCCAGCGCCGCCGCCGCCGCGCTGAAGCCGCGGCCGGACAAGGTGGATTCCG-TC-AGTAGACGCCCCACGTTCAACGACAACCTCAAGACGCTGTTCGAGGAGCTCCTGATGGAGTTCAACGTGAAGGGCGCCGACA-CGGCCAAGTTCCTCG-CCGAGAAGGTGAAGAAGAGCTCTGGTGCAAC-AACTACTGCGCCTGTAGGAGGCGCCCGTTATGCA-GCAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGTTAATATCTT--TCTCTCTCTTTTTTATTTCGTAGTACATAATTAGCTTATGGTTGCTAGGACTGGACTGGGCTGAACCTGTTGACCAAGATGATG-AATTAAATAGATATATGCCTATCCATCTCAAGGCTCTTAAGACATCAAAAAA] [+] EMBL AK067926 [CGCACCCGCACTCCAACCAGCGCGAGCGGCGTCCTCCTCCTCCGTCGGCGTCGGCGGCGGCGGCGACGGCCATGGACTTCGGGTACGTCGGCGTGGGGCAGGGGAGCTCGTCGTCGTCGTCGTCGGCGTCGTGCCGAGCGGCGGACGTGGCGGCGTGGGGATCCTCCACCCAGCAGCAGCAGAAGCGGCAGCGGTGCCAGGGTTCTTCTGATGACCAAGTTGGATTGAGCACAAGTAATTCTTTGCAAATGTCAGAACCAGAGCCTCGAGATTTTGATAATGGAGAAAATGAGGAAGAAGATTAC TATCTGGACGAGGACGATTGC ATTTATGATGATGGCGATGGATATGATTATGAA TTTGATGGCGGTGACTAC TTCAACCAACGTC TTGCTGATAAA TTTGATGATTTGGATTTGCCTCCAGGCGTGGAGGCTACTGTACCTTGGCTTCAGAAAATTATAACTAACGAAGAGCAAAGCAGTTCCAAATTGACAGTTGAAGATGAAAGCGCAAATAAAAGTGCAAATAAATCTCAGTTGTTCAAACAGTTTGACACTGTTAAAAATTTCTCTGATCATCATTATGCAGCAACATCAGGGGATGTGACAAAGAGAGACTGGGTGAAGAGGATTCAGCATGACTGGAAACTTTTGGAGAAAGATCTACCAGCATCTATTTATGTCCGTGTTGCTGAAGATAGAATGGACCTTCTTAGGGCTGCTATTATCGGACCTAAGGGAACACCGTACCACGATGGGCTCTTCTTCTTTGATATTCAATTTAGTAACTCTTACCCTGCTAATCCTCCATCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAATAATGGAAAAGTATGCCTTAGTCTTCTTGGTACCTGGGCAGGTAGTGGTTGTGAGACGTGGAATCCATCTCAGTCGACCATGCTACAAGTGCTCGTCT CCATTCAAGCTCTCATTTTGAATGAGAAGCCCTACTTCAATGAGCCAGGATATGCATCCTACGCCAATAGTGTATCTGGAGAGCGGATTGCTATGGAGTATAACGACAACACATTTCTGCACTCATGCAGGACGATGCTCTACTCACTTCGGCGGCCTCCAGAGCACTTCGCAGACCTTGTTACCAGCCACTTCAGGGAGCGCGGGCACACCATCCTGGCAGCATGCAGGTACTACATGGAAGGCCACAAGGTCGGATCG GTGGTCCCCGAAGA GAAGGAGCCGGAGTACGGC GACGCGGGAGCATCCACCAGCAGCGCCAGCGCCCGCGCCGCCGCCGCCGCTCTGAAGCCGCGGCCGGACAAGGTGGATTCCG TC AGTAGACGCCCCACGTTCAACGACAACCTCAAGACGCTGTTCGAGGAGCTCCTGATGGAGTTCAACGTGAAGGGCGCCGACA CGGCCAAGTTCCTCG CCGAGAAGGTGAAGAAGAGCTCTGGTGCAAC AACTACTGCGCCTGTAGGAGGCGCCCGTTATGCA GCAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGTTAATATCTT TCTCTCTCTTTTTTATTTCGTAGTACATAATTAGCTTATGGTTGCTAGGACTGGACTGGGCTGAACCTGTTGACCAAGATGATG AATTAAATAGATATATGCCTATCCATCTCAAGGCTC ] [+] EMBL AU070209 [ AACCAGCGCGA CGNCGTCCTCCTCCTCCGTCGGCGTCGGCGGCGGCGGCGACGGCCATGGACTTCGGGTACGTCGGCGTGGGGCAGGGGAGCTCGTCGTCGTCGTCGTCGGCGTCGTGCCGAGCGGCGGACGTGGCGGCGTGGGGATCCTCCACCCAGCAGCAGCAGAAGCGGCAG GNTGCCAGGGTTCTTCTGATGACCAAGTTGGATTGAGCACAAGTAATTCTTTGCAAATGTCAGAACCAGAGCCTCGAGATTTTGATAATGGAGAAAATGAGGAAGAAGATTAC TATCTGGACGAGGACGATTGC ATTTATGATGATGGCGATGGATATGATTATGAATTTTGATGGCGGTGACTACTTTCAACCAACGTCTTTGCTGATAAANTTTGATGNTTTttgat ] [+] EMBL AU070210 [ AACCAGCGCGA CGGCGTCCTCCTCCTCCGTCGGCGTCGGCGGCGGCGGCGACGGCCATGGACTTCGGGTACGTCGGCGTGGGGCAGGGGAGCTCGTCGTCGTCGTCGTCGGCGTCGTGCCGAGCGGCGGACGTGGCGGCGTGGGGATCCTCCACCCAGCAGCAGCAGAAGCGGCAGCGGTGCCAGGGTTCTTCTGATGACCAAGTTGGATTGAGCACAAGTAATTCTTTGCAAATGTCAGAACCAGAGCCTCGAGATTTTGATAATNGAGAAAATGAGGAAGAAGATTACTTATCTNGACGAGGACGATTNCAATTTATGATGATGGCGATGGATATGATTATGAT TTTGATGGCGGTtg ] [+] EMBL CB658559 [ TCTGATGACCAAGTTGGATTGAGCACAAGTAATTCTTTGCAAATGTCAGAACCAGAGCCTCGAGATTTTGATAATGGAGAAAATGAGGAAGAAGATTAC TATCTGGACGAGGACGATTGC ATTTATGATGATGGCTATGGATATGATTATGAA TTTGATGGCGGTGACTAC TTCAACCAACGTC TTGCTGATAAA TTTGATGATTTGGATTTGCCTCCAGGCGTGGAGGCTACTGTACCTTGGCTTCAGAAAATTATAACTAACGAAGAGCAAAGCAGTTCCAAATTGACAGTTGAAGATGAAAGCGCAAATAAAAGTGCAAATAAATCTCAGTTGTTCAAACAGTTTGACACTGTTAAAAATTTCTCTGATCATCATTATGCAGCAACATCAGGGGATGTGACAAAGAGAGACTGGGTGAAGAGGATTCAGCATGACTGGAAACTTTTGGAGAAAGATCTACCAGCATCTATTTATGTCCGTGTTGCTGAAGATAGAATGGACCTTCTTAGGGCTGCTATTATCGGACCTAAGGGAACACCGTACCACGATGGGCTCTTCTTCTTTGATATTCAATTTAGTAACTCTTACCCTGCTAATCCTCCATCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAATAATGGAAAAGTATGCCTTAGTCTTCTTGGTACCTGNGCAGGTAGTGGTTGTGAGACGTGGAATCCATCTCAGTCGACCATGCTACAAGTGCTCGTCTCCCATTC AGCTCTC ] [+] EMBL AK119659 [ AACTCTTACCCTGCTAATCCTCCATCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAATAATGGAAAAGTATGCCTTAGTCTTCTTGGTACCTGGGCAGGTAGTGGTTGTGAGACGTGGAATCCATCTCAGTCGACCATGCTACAAGTGCTCGTCT CCATTCAAGCTCTCATTTTGAATGAGAAGCCCTACTTCAATGAGCCAGGATATGCATCCTACGCCAATAGTGTATCTGGAGAGCGGATTGCTATGGAGTATAACGACAACACATTTCTGCACTCATGCAGGACGATGCTCTACTCACTTCGGCGGCCTCCAGAGCACTTCGCAGACCTTGTTACCAGCCACTTCAGGGAGCGCGGGCACACCATCCTGGCAGCATGCAGGTACTACATGGAAGGCCACAAGGTCGGATCG GTGGTCCCCGAAGA GAAGGAGCCGGAGTACGGC GACGCGGGAGCATCCACCAGCAGCGCCAGCGCCAGCGCCGCCGCCGCCGCTCTGAAGCCGCGGCCGGACAAGGTGGATTCCG TC AGTAGACGCCCCACGTTCAACGACAACCTCAAGACGCTGTTCGAGGAGCTCCTGATGGAGTTCAACGTGAAGGGCGCCGACA CGGCCAAGTTCCTCG CCGAGAAGGTGAAGAAGAGCTCTGGTGCAAC AACTACTGCGCCTGTAGGAGGCGCCCGTTATGCA GCAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGTTAATATCTT TCTCTCTCTTTTTTATTTCGTAGTACATAATTAGCTTATGGTTGCTAGGACTGGACTGGGCTGAACCTGTTGACCAAGATGATG AATTAAATAGATATATGCCTATCCATCTCAAGG ] [+] EMBL BI808627 [ CGCGGGCACACCATCCTGGCAGCATGCAGGTACTACATGGAAGGCCACAAGGTCGGATCG GTGGTCCCCGAAGA GAAGGAGCCGGAGTACGGC GACGCGGGAGCATCCACCAGCAGCGCCAGCGCCAGCGCCGCCGCCGCCGCGCTGAAGCCGCGGCCGGACAAGGTGGATTCCG TC AGTAGACGCCCCACGTTCAACGACAACCTCAAGACGCTGTTCGAGGAGCTCCTGATGGAGTTCAACGTGAAGGGCGCCGACA CGGCCAAGTTCCTCG CCGAGAAGGTGAAGAAGAGCTCTGGTGCAAC AACTACTGCGCCTGTAGGAGGCGCCCGTTATGCA GCAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGTTAATATCTTTCTCTCTCTCTTTTTTATTTCGTAGTACATAATTAGCTTATGGTTGCTAGGACTGGACTGGGCTGAACCTGTTGACCAAGATGATG AATTAAATAGATATATGCCTATCCATCTCAAGGCTCTTAAGACATCAAAAAA] [+] EMBL BM038984 [ TACATGGAA GCCACAAGTTCGGATCGTGTGTTCCCCGAAGA GAAGGA CCGGAGTACGGCAGACGCGGGAGCATCCACCAGCAGCCCCAGCGCCAGC CC CC CC CCGCGCTGAA CCGC GCCCGACAAGGTGGATTCCGCTCAAGTAGACGCCCCACGTTCAACGACAACCTCAAGACGCTGTTCGAGGAGCTCCTGATGGAGTTCAACGTGAAGGGCGCCGACACCGGCCAAGTTCCTCGCCCGAGAAGGTGAAGAAGAGCTCTGGTGCAACAAACTACTGCGCCTGTAGGAGGCGCCCGTTATCCACCCAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGTTAATATCTTTCTCTCTCTCTTTTTTATTTCGTAGTACATAATTAGCTTATGGTTGCTAGGACTGGACTGGGCTGAACCTGTTGACCAAGATGATGCAATTAAATAGATATATGCCTATCCAaaa ] [+] EMBL BM421157 [ tgttTCCCCGAAGAGGAAGGACCCGGAGTACGGC GACGCGGGAGCATCCACCAGCAGCGCCAGCGCCAGC CC CCGCCGCCGCGCTGAAGCCGCGGCCGGACAAGGTGGATTCCG TC AGTAGACGCCCCACGTTCAACGACAACCTCAAGACGCTGTTCGAGGAGCTCCTGATGGAGTTCAACGTGAAGGGCGCCGACA CGGCCAAGTTCCTCG CCGAGAAGGTGAAGAAGAGCTCTGGTGCAAC AACTACTGCGCCTGTAGGAGGCGCCCGTTATGCA GCAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGTTAATATCTTTCTCTCTCTCTTTTTTATTTCGTAGTACATAATTAGCTTATGGTTGCTAGGACTGGACTGGGCTGAACCTGTTGACCAAGATGATG AATTNAATAGATATATGCCTATCCATCTCAAaaa ] consensusID : consensus_13389#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 797 fasta sequence [GAATCCTGCTTATTTTTGTTTTATGTAGCATCTATTTATGTCCGTGTTGCTGAAGATAGAATGGACCTTCTTAGGGCTGCTATTATCGGACCTAAGGGAACACCGTACCACGATGGGCTCTTCTTCTTTGATATTCAATTTAGTAACTCTTACCCTGCTAATCCTCCAGTATGTGCCTAAGTCTCAGCACTGCTTTTATGACATTTTCACCTTTTTATTTTGTTGAAATATTTGTTGTTGATGATGTTGCAGTCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAATAATGGAAAAGTATGCCTTAGTCTTCTTGGTACCTGGGCAGGTAGTGGTTGTGAGACGTGGAATCCATCTCAGTCGACCATGCTACAAGTGCTCGTCTCCATTCAAGCTCTCATTTTGAATGAGAAGCCCTACTTCAATGAGCCAGGATATGCATCCTACGCCAATAGTGTATCTGGAGAGCGGATTGCTATGGAGTATAACGACAACACATTTCTGCACTCATGCAGGACGATGCTCTACTCACTTCGGCGGCCTCCAGAGGTAATATTTTTGTTAATTTTTGCATTTTTTTTAGACGGAGGGAGTACTGATTATGGTTAGCACGCAGAACATAGAGATTGATGGAGGGTTAAAGGTTATTTTTTCTTGAAAATAATGATTATAGGTGGAGGATGAAACGGAGAAGTTTGCTGAATAAACACACATGATTTGATTTGACTATAGCTTGGTGCTGGATTATGTTACCAACCCTACTTCCAATTNTTTACATCTCA] [+] EMBL CB682167 [GAATCCTGCTTATTTTTGTTTTATGTAGCATCTATTTATGTCCGTGTTGCTGAAGATAGAATGGACCTTCTTAGGGCTGCTATTATCGGACCTAAGGGAACACCGTACCACGATGGGCTCTTCTTCTTTGATATTCAATTTAGTAACTCTTACCCTGCTAATCCTCCAGTATGTGCCTAAGTCTCAGCACTGCTTTTATGACATTTTCACCTTTTTATTTTGTTGAAATATTTGTTGTTGATGATGTTGCAGTCAGTATACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAATAATGGAAAAGTATGCCTTAGTCTTCTTGGTACCTGGGCAGGTAGTGGTTGTGAGACGTGGAATCCATCTCAGTCGACCATGCTACAAGTGCTCGTCTCCATTCAAGCTCTCATTTTGAATGAGAAGCCCTACTTCAATGAGCCAGGATATGCATCCTACGCCAATAGTGTATCTGGAGAGCGGATTGCTATGGAGTATAACGACAACACATTTCTGCACTCATGCAGGACGATGCTCTACTCACTTCGGCGGCCTCCAGAGGTAATATTTTTGTTAATTTTTGCATTTTTTTTAGACGGAGGGAGTACTGATTATGGTTAGCACGCAGAACATAGAGATTGATGGAGGGTTAAAGGTTATTTTTTCTTGAAAATAATGATTATAGGTGGAGGATGAAACGGAGAAGTTTGCTGAATAAACACACATGATTTGATTTGACTATAGCTTGGTGCTGGATTATGTTACCAACCCTACTTCCAATTNTTTACATCTCA] consensusID : consensus_13389#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 631 fasta sequence [CACTCATGCAGGAGGATGTTTTATTCATTTGGGGGGCCTCCAGAGCATTTGGCAGCCCTTGTTACCAGCCACTTCAGGGAGGGGGGGCACCCCTTCTTGGCAGCATGCAGGTATTCCATGGAAGGCCCCAAGGTCGGATCGGTGTTCCCCGAAGAGAAGGAGCCGGAGTACGGCGACGCGGGAGCATCCCCCAGCAGCGCCAGCGCCAGCGCCGCCGCCGCCGTTTTGAAGCCGCGGCCGGACAAGGTGGATTCCGTCAGTAGACCCCCCCCGTTCAACGACACCCTCAAGACGCTGTTCGAGGAGCTCCTGATGGAGTTCAACGTGAAGGGCGCCGCCCCGGCCAAGTTCCTCCCCGAGAAGGTGAAGAAGAGTTTTGGTGCAACAACTACTGCCCCTGTAGGAGGCCCCCGTTATGCACCAAAAGTGGTGGATGAGTGGATGGATTATTTTGCTTTCCCTAACTGCAGAGAAGTTAATATCTTTTTCTTTCTTTTTTATTTCGTAGTCCATAATTAGCTTATGGTTGTTAGGACTGGACTGGGCTGACCCTGTTGCCCAAAATGATGAATTAAATAGATATATCCCTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA] [-] EMBL CB658560 [CACTCATGCAGGAGGATGTTTTATTCATTTGGGGGGCCTCCAGAGCATTTGGCAGCCCTTGTTACCAGCCACTTCAGGGAGGGGGGGCACCCCTTCTTGGCAGCATGCAGGTATTCCATGGAAGGCCCCAAGGTCGGATCGGTGTTCCCCGAAGAGAAGGAGCCGGAGTACGGCGACGCGGGAGCATCCCCCAGCAGCGCCAGCGCCAGCGCCGCCGCCGCCGTTTTGAAGCCGCGGCCGGACAAGGTGGATTCCGTCAGTAGACCCCCCCCGTTCAACGACACCCTCAAGACGCTGTTCGAGGAGCTCCTGATGGAGTTCAACGTGAAGGGCGCCGCCCCGGCCAAGTTCCTCCCCGAGAAGGTGAAGAAGAGTTTTGGTGCAACAACTACTGCCCCTGTAGGAGGCCCCCGTTATGCACCAAAAGTGGTGGATGAGTGGATGGATTATTTTGCTTTCCCTAACTGCAGAGAAGTTAATATCTTTTTCTTTCTTTTTTATTTCGTAGTCCATAATTAGCTTATGGTTGTTAGGACTGGACTGGGCTGACCCTGTTGCCCAAAATGATGAATTAAATAGATATATCCCTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA] consensusID : consensus_13389#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 425 fasta sequence [GTACGGCGACGCGGGAGCATCCACCAGCAGCGCCAGCGCCAGCGCCGCCGCCGCCGCTCTGAAGCCGCGGCCGGAC-AAGGTGGATTCC-GTC--AGTAGAC-GCCCCAC-GTTCAACGAC-AACCTCAAGACGCTGTTCGAGGAGCTCCT-GATGGAGTTC-AACGTGAAGGGCGCC-GACACGGC-C-AAGTTCCTC-GCCGAGAAGGTGAAGAAGAG-CTCTGGTGC-AAC-AACTACTGCGCCTGTAGGAGGCGCCCGTTATGCAGCAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGTTAATATCTTTCTCTCTCTTTTTTATTTCGTAGTACATAATTAGCTTATGGTTGCTAGGACTGGACTGGGCTGAACCTGTTGACCAAGATGATGAATTAAATAGATAAAAAAAAAAA] [+] EMBL AU184733 [GTACGGCGACGCGGGAGCATCCACCAGCAGCGCCAGCGCCAGCGCCGCCGCCGCCGCTCTGAAGCCGCGGCCGGAC AAGGTGGATTCC GTC AGTAGAC GCCCCAC GTTCAACGAC AACCTCAAGACGCTGTTCGAGGAGCTCCT GATGGAGTTC AACGTGAAGGGCGCC GACACGGC C AAGTTCCTC GCCGAGAAGGTGAAGAAGAG CTCTGGTGC AAC AACTACTGCGCCTGTAGGAGGCGCCCGTTATGCAGCAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGTTAATATCTTTCTCTCTCTTTTTTATTTCGTAGTACATAATTAGCTTATGGTTGCTAGGACTGGACTGGGCTGAACCTGTTGACCAAGATGATGAATTAAATAGATAAAAAAAAAAA] [+] EMBL BI800104 [ cccgGGACAAAGGTGGATTCCGGTCAAAGTAGACGGCCCCACGGTTCAACGACAAACCTCAAGACGCTGTTCGAGGAGCTCCTGGATGGAGTTCAAACGTGAAGGGCGCCGGACACGGCACAAAGTTCCTCAGCCGAGAAGGTGAAGAAGAGTCTCTGGTGCAAACAAACTACTGCGCCTGTAGGAGGCGCCCGTTATGCACCAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAG ] [+] EMBL AU184732 [ GAGCTCCT GATGGAGTTC AACGTGAAGGGCGCC GNCACGGC C AAGTTCCTC TCCGAGAAGGTGAAGAAGAG CTNTGGTGC AAC AACTACTGCGCCTGTAGGAGGCGCCCGTTATGCAGCAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGTTAATATCTTTCTCTCTCTTTTTTATTTCGTAGTACATAATTAGCTTATGGTTGCTAGGACTGGACTGGGCTGAACCTGTTGACCAAGATGATGAATTAAATAGATAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 CGCACCCGCACTCCAACCAGCGCGACGGCGTCCTCCTCCTCCGTCGGCGTCGGCGGCGGC 60 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 GGCGACGGCCATGGACTTCGGGTACGTCGGCGTGGGGCAGGGGAGCTCGTCGTCGTCGTC 120 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 GTCGGCGTCGTGCCGAGCGGCGGACGTGGCGGCGTGGGGATCCTCCACCCAGCAGCAGCA 180 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 GAAGCGGCAGCGGTGCCAGGGTTCTTCTGATGACCAAGTTGGATTGAGCACAAGTAATTC 240 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 TTTGCAAATGTCAGAACCAGAGCCTCGAGATTTTGATAATGGAGAAAATGAGGAAGAAGA 300 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 TTACTATCTGGACGAGGACGATTGCATTTATGATGATGGCGATGGATATGATTATGAATT 360 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 TGATGGCGGTGACTACTTCAACCAACGTCTTGCTGATAAATTTGATGATTTGGATTTGCC 420 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 TCCAGGCGTGGAGGCTACTGTACCTTGGCTTCAGAAAATTATAACTAACGAAGAGCAAAG 480 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 CAGTTCCAAATTGACAGTTGAAGATGAAAGCGCAAATAAAAGTGCAAATAAATCTCAGTT 540 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 GTTCAAACAGTTTGACACTGTTAAAAATTTCTCTGATCATCATTATGCAGCAACATCAGG 600 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 GGATGTGACAAAGAGAGACTGGGTGAAGAGGATTCAGCATGACTGGAAACTTTTGGAGAA 660 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 AGATCTACCAGCATCTATTTATGTCCGTGTTGCTGAAGATAGAATGGACCTTCTTAGGGC 720 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 TGCTATTATCGGACCTAAGGGAACACCGTACCACGATGGGCTCTTCTTCTTTGATATTCA 780 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 ATTTAGTAACTCTTACCCTGCTAATCCTCCATCAGTATACTACCACTCTGGCGGACTACG 840 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 GATTAACCCAAACTTATACAATAATGGAAAAGTATGCCTTAGTCTTCTTGGTACCTGGGC 900 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 AGGTAGTGGTTGTGAGACGTGGAATCCATCTCAGTCGACCATGCTACAAGTGCTCGTCTC 960 consensus_13389#1 ------------------------------------------------------------ consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 CATTCAAGCTCTCATTTTGAATGAGAAGCCCTACTTCAATGAGCCAGGATATGCATCCTA 1020 consensus_13389#1 -------------------------------------------------------GAATC 5 consensus_13389#2 ----------------------------------------------------------CA 2 consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 CGCCAATAGTGTATCTGGAGAGCGGATTGCTATGGAGTATAACGACAACACATTTCTGCA 1080 consensus_13389#1 CTGCTTATTTTTGTTTTATGTAGCATCTATTTATGTCCGTGTTGCTGAAGATAGAATGGA 65 consensus_13389#2 CTCATGCAGGAGGATGTTTTATTCATTTGGGGGGCCTCCAGAGCATTTGGCAGCCCTTGT 62 consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 CTCATGCAGGACGATGCTCTACTCACTTCGGCGGCCTCCAGAGCACTTCGCAGACCTTGT 1140 consensus_13389#1 CCTTCTTAGGGCTGCTATTATCGGACCTAAGGGAACACCGTACCACGATG-GGCTCTTCT 124 consensus_13389#2 TACCAGCCACTTCAGGGAGGGGGGGCACCCCTTCTTGGCAGCATGCAGGTATTCCATGGA 122 consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 TACCAGCCACTTCAGGGAGCGCGGGCACACCATCCTGGCAGCATGCAGGTACTACATGGA 1200 consensus_13389#1 TCTTTGATATTCAATTTAGTAACTCTTACCCTGCTAATCCTCCAGTATGTGCCTAAGTCT 184 consensus_13389#2 AGGCCCCAAGGTCGGATCGGTGTTCCCCGAAGAGAAGGAGCCGGAGTACGGCGACGCGGG 182 consensus_13389#3 ---------------------------------------------GTACGGCGACGCGGG 15 consensus_13389#0 AGGCCACAAGGTCGGATCGGTGGTCCCCGAAGAGAAGGAGCCGGAGTACGGCGACGCGGG 1260 consensus_13389#1 CAGCACTGCTTTTATGACATTTTCACCTTTTTATTTTGTTGAAATATTTGTTGTTGATGA 244 * * * * * consensus_13389#2 AGCATCCCCCAGCAGCGCCAGCGCCAGCGCCGCCGCCGCCGTTTTGAAGCCGCGGCCGGA 242 consensus_13389#3 AGCATCCACCAGCAGCGCCAGCGCCAGCGCCGCCGCCGCCGCTCTGAAGCCGCGGCCGGA 75 consensus_13389#0 AGCATCCACCAGCAGCGCCAGCGCCAGCGCCGCCGCCGCCGCGCTGAAGCCGCGGCCGGA 1320 consensus_13389#1 TGTTGCAGTCAGTA-TACTACCACTCTGGCGGACTACGGATTAACCCAAACTTATACAAT 303 * * *** * * * * * ** * * ** * * * consensus_13389#2 CAAGGTGGATTCCGTCAGTAGACCCCCCCCGTTCAACGACACCCTCAAGACGCTGTTCGA 302 consensus_13389#3 CAAGGTGGATTCCGTCAGTAGACGCCCCACGTTCAACGACAACCTCAAGACGCTGTTCGA 135 consensus_13389#0 CAAGGTGGATTCCGTCAGTAGACGCCCCACGTTCAACGACAACCTCAAGACGCTGTTCGA 1380 consensus_13389#1 AATGGAAAAGTATGCC--TTAGTCTTCTTGGTACCTGGGCAGGTAGTGGTTGTGAGACGT 361 * ** * * * * * * ** * * ** * * ** consensus_13389#2 GGAGCTCCTGATGGAGTTCAACGTGAAGGGCGC-CGCCCCGGCCAAGTTCCTCCCCGAGA 361 consensus_13389#3 GGAGCTCCTGATGGAGTTCAACGTGAAGGGCGC-CGACACGGCCAAGTTCCTCGCCGAGA 194 consensus_13389#0 GGAGCTCCTGATGGAGTTCAACGTGAAGGGCGC-CGACACGGCCAAGTTCCTCGCCGAGA 1439 consensus_13389#1 GGAATCCATCTCAGTCGACCATGCTACAAGTGCTCGTCTCCATTCAAGCTCTCATTTTGA 421 *** * * * * * * * * ** ** * * * *** ** consensus_13389#2 AGGTGAAGAAGAGTTTTGGTGCAACAACTACTGCCCCTGTAGGAGGCCCCCGTTATGCAC 421 consensus_13389#3 AGGTGAAGAAGAGCTCTGGTGCAACAACTACTGCGCCTGTAGGAGGCGCCCGTTATGCAG 254 consensus_13389#0 AGGTGAAGAAGAGCTCTGGTGCAACAACTACTGCGCCTGTAGGAGGCGCCCGTTATGCAG 1499 consensus_13389#1 ATGAGAAGCCCTACTTCAATGAGCCAGGATATGCATCCTACGCCAATAGTGTATCTGGAG 481 * * **** * ** ** *** * * * ** * consensus_13389#2 CAAAAGTGGTGGATGAGTGGATGGATTATTTTGCTTTCCCTAACTGCAGAGAAGT----T 477 consensus_13389#3 CAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGT----T 310 consensus_13389#0 CAGAAGTGGTGGATGAGTGGATGGATTAGTCTGCTTTGCCTAACTGCAGAGAAGT----T 1555 consensus_13389#1 AGCGGATTGCTATGGAGTATAACGACAACACATTTCTGCACTCATGCAGGACGATGCTCT 541 * * **** * ** * * * * ***** * * consensus_13389#2 AATATCTTTTTCTTTCTTT--------TTTATTTCGTAGTCCATAATTAGCTTATGGTTG 529 consensus_13389#3 AATATCTTTCTCTCTCTTT--------TTTATTTCGTAGTACATAATTAGCTTATGGTTG 362 consensus_13389#0 AATATCTTTCTCTCTCTTT--------TTTATTTCGTAGTACATAATTAGCTTATGGTTG 1607 consensus_13389#1 ACTCACTTCGGCGGCCTCCAGAGGTAATATTTTTGTTAATTTTTGCATTTTTTTTAGACG 601 * * *** * ** * * *** ** * * * ** * * * consensus_13389#2 TTAGGACTG--GACTGGGCTGACCCTGTTGCCCAAAATGATGAATTAAA---TAGATATA 584 consensus_13389#3 CTAGGACTG--GACTGGGCTGAACCTGTTGACCAAGATGATGAATTAAA---TAGATA-- 415 consensus_13389#0 CTAGGACTG--GACTGGGCTGAACCTGTTGACCAAGATGATGAATTAAA---TAGATATA 1662 consensus_13389#1 GAGGGAGTACTGATTATGGTTAGCACGCAGAACATAGAGATTGATGGAGGGTTAAAGGTT 661 *** * ** * * * * * * * ** *** ** * ** * consensus_13389#2 TCCCTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA------------- 631 consensus_13389#3 --------AAAAAAAAAA------------------------------------------ 425 consensus_13389#0 TGCCTATCCATCTCAAGGCTCTTAAGACATCAAAAAA----------------------- 1699 consensus_13389#1 ATTTTTTCTTGAAAATAATGATTATAGGTGGAGGATGAAACGGAGAAGTTTGCTGAATAA 721 * consensus_13389#2 ------------------------------------------------------------ consensus_13389#3 ------------------------------------------------------------ consensus_13389#0 ------------------------------------------------------------ consensus_13389#1 ACACACATGATTTGATTTGACTATAGCTTGGTGCTGGATTATGTTACCAACCCTACTTCC 781 consensus_13389#2 ---------------- consensus_13389#3 ---------------- consensus_13389#0 ---------------- consensus_13389#1 AATTNTTTACATCTCA 797 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||