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Oryza sativa
cluster # 13390 cluster # 13390       Sequences # 13       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13390#0 length = 1889 sequences # 9  
consensus_13390#1 length = 1862 sequences # 2  
consensus_13390#2 length = 936 sequences # 1  
consensus_13390#3 length = 498 sequences # 1  

consensusID : consensus_13390#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1889
fasta sequence
                              [ATACCGGACCACAAGCAGTAACTGGAAGTGGATCAACATCATCCGTCTGCTATAGTCTACTAGTACTTGCATTGCGGGGAGGGAGACACCTATTCTGCTAAGCTGCCCACGGCCATGGAGTCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACGTCGAGCACA-TCCTCAAGACCAACTTCGCCAACTAC-GGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCTTCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGCAGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGAACAGATGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCGAGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACTTCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCTGCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCGACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGACGCCATCAACAAGATGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCGATGTCAAATACTGCTTCTCGGATGACACGTTGCCGGACGGGCACGCGGTGAAGAAAGGAGACATGGTGAACTACCAACCGTACCCCATGGGCAGGATGAAGTTCCTGTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATGACAGTGGTATGTTCGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGGGAAGGAGTTCGCGTACA---GGCA-GATGAAGATCG-TTTCGGCTGTCCT-TCTCTACTTCTTCAGATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCA-AAAGTTCA-AAACTCAAGGGCGGCGCTGGTCTATTTCATCCA-TTTTGGCGGGGATAATGA-CG-GTTAGATATGGTTGTCGAAGACA-ACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGTATTATACTCTTAAAAACTTTTTACTAGAGGGCTATGTGTACTCCCTCCGTTCCACGTAATAAGACACGATCAAACATGACACCA-TCATCAAAATTAATCTGACTTAAAA]

[+] EMBL AK101618             [ATACCGGACCACAAGCAGTAACTGGAAGTGGATCAACATCATCCGTCTGCTATAGTCTACTAGTACTTGCATTGCGGGGAGGGAGACACCTATTCTGCTAAGCTGCCCACGGCCATGGAGTCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACGTCGAGCACA TCCTCAAGACCAACTTCGCCAACTAC GGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCTTCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGCAGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGAACAGATGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCGAGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACTTCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCTGCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCGACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGACGCCATCAACAAGATGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCGATGTCAAATACTGCTTCTCGGATGACACGTTGCCGGACGGGCACGCGGTGAAGAAAGGAGACATGGTGAACTACCAACCGTACCCCATGGGCAGGATGAAGTTCCTGTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATGACAGTGGTATGTTCGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGGGAAGGAGTTCGCGTACA   GGCA GATGAAGATCG TTTCGGCTGTCCT TCTCTACTTCTTCAGATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCA AAAGTTCA AAACTCAAGGGCGGCGCTGGTCTATTTCATCCA TTTTGGCGGGGATAATGA CG GTTAGATATGGTTGTCGAAGACA ACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGTATTATACTCTTAAAAACTTTTTACTAGAGGGCTATGTGTACTCCCTCCGTTCCACGTAATAAGACACGATCAAACATGACACCA TCATCAAAATTAATCTGACTT    ]
[+] EMBL AK103182             [                                                                                                  TAAGCTGCCCACGGCCATGGAGTCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACGTCGAGCACA TCCTCAAGACCAACTTCGCCAACTAC GGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCTTCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGCAGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGAACAGATGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCGAGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACTTCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCTGCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCGACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGACGCCATCAACAAGATGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCGATGTCAAATACTGCTTCTCGGATGACACGTTGCCGGACGGGCACGCGGTGAAGAAAGGAGACATGGTGAACTACCAACCGTACCCCATGGGCAGGATGAAGTTCCTGTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATGACAGTGGTATGTTCGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGGGAAGGAGTTCGCGTACA   GGCA GATGAAGATCG TTTCGGCTGTCCT TCTCTACTTCTTCAGATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCA AAAGTTCA AAACTCAAGGGCGGCGCTGGTCTATTTCATCCA TTTTGGCGGGGATAATGA CG GTTAGATATGGTTGTCGAAGACA ACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGTATTATACTCTTAAAAACTTTTTACTAGAGGGCTATGTGTACTCCCTCCGTTCCACGTAATAAGACACGATCAAACATGA                               ]
[+] EMBL BU099191             [                                                                                                  TAAGCTGCCCACGGCCATGGAGTCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACGTCGAGCACATTNCTC AGACCAACTTCGNCAACTACGGGCAGGGGCCCGATGACCCACGACGTGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK120901             [                                                                                                   AAGCTGCCCACGGCCATGGAGTCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACGTCGAGCACA TCCTCAAGACCAACTTCGCCAACTAC GGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCTTCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGCAGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGAACAGATGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCGAGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACTTCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCTGCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCGACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGTCAGAAGACGCCATCAACAAGATGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCGATGTCAAATACTGCTTCTCGGATGACACGTTGCCGGACGGGCACGCGGTGAAGAAAGGAGACATGGTGAACTACCAACCGTACCCCATGGGCAGGATGAAGTTCCTGTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATGACAGTGGTATGTTCGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGGGAAGGAGTTCGCGTACA   GGCA GATGAGGATCG TTTCGGCTGTCCT TCTCTACTTCTTCAGATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCA AAAGTTCA AAACTCAAGGGCGGCGCTGGTCTATTTCATCCA TTTTGGCGGGGATAATGA CG GTTAGATATGGTTGTCGAAGACA ACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGTATTATACTCTTA                                                                                                  ]
[+] EMBL AK119612             [                                                                                                    AGCTGCCCACGGCCATGGAGTCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGCCGGGCCGGCCAACGTCGAGCACA TCCTCAAGACCAACTTCGCCAACTAC GGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCTTCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGCAGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGGACAGATGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCGAGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACTTCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCTGCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCGACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGACGCCATCAACAAGATGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCGATGTCAAATACTGCTTCTCGGATGACACGTTGCCGGACGGGCACGCGGTGAAGAAAGGAGACATGGTGAACTACCAACCGTACCCCATGGGCAGGATGAAGTTCCTGTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATGACTGTGGTATGTTCGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGGGAAGGAGTTCGCGTACA   GGCA GATGAAGATCG TTTCGGCTGTCCT TCTCTACTTCTTCAGATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCA AAAGTTCA AAACTCAAGGGCGGCGCTGGTCTATTTCATCCA TTTTGGCGGGGATAATGA CG GTTAGATATGGTTGTCGAAGACA ACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGTATTATACTCTTAAAA                                                                                               ]
[+] EMBL CF310527             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGGGCTTGGTGTTTGCC GGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCTTCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGCAGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGAACAGATGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCGAGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACTTCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCTGCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCGACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGACGCCATCAACAAGATGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCGATGTCAAATACTGCTTCTCGGATGACACGTTGCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CF310528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGATGAAGTTCCTGTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATGACAGTGGTATGTTCGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGGGAAGGAGTTCGCGTACG   GGCA GATGAAGATCG TTTCGGCTGTCCT TCTCTACTTCTTCAGATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCA AAAGTTCA AAACTCAAGGGCGGCGCTGGTCTATTTCATCCA TTTTGGCGGGGATAATGA CG GTTAGATATGGTTGTCGAAGACA ACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGTATTATACTCTTAAAAACTTTTTACTAGAGGGCTATGTGTACTCCCTCCGTTCCACGTAATAAGACACGATCGAACATGACACCA TCATCAAAAaa              ]
[+] EMBL BI812178             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTCAA CCCGA C GTGGCTCGATGACA TGGTATGTTC TC CCGAGAGCCCCTTCAAGTTCACGGCGTT CA GC GGGCCACGAATCTGCTTGGGGAAGGAGTTCGCGTACA   GGCA GATGAAGATC  TTTCGCCTGTCCT TCTCTACTTCTTCAGATTCGAGATGTGGGATGTCGACGCCACCGTGGGTTATA GCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCA AAAGTTCA AAACTCAAGGGCGGCGCTGGTCTATTTCATCCA TTTTGGCGGGGATAATGA CGCCTTAGATATGGTTGTCGAAGACA ACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGGATTATACTCTTAAAAACTTTTTACTAGAGGGCTATATGTACTCCCTCCGTTCCACGTAATAAGACACGATC AACATGACACCACTCATC AAATTAATCTGAAAAAAAA]
[+] EMBL BQ907783             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGGGAAGGAGTTCGCGTACACACGGCACGATGAAGATCGCTTTCGGCTGTCCTGTCTCTACTTCTTCAGATTCGAGATGTGGGATGTCGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCACAAAGTTCANAAACTCAAGGGCGGCGCTGGTCTATTTCATCCACTTTTGGCGGGGATAATGACCG GTTAGATATGGTTGTCGAAGACACACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGGATTATACTCTTAAAAACTTTTTACTAGAGGGCTATATGTACTCCCTCCGTTCCACGTAATAAGACACGATCAAACATGACACCA TCATCAAAAaaa             ]


>consensus_13390#0 ATACCGGACCACAAGCAGTAACTGGAAGTGGATCAACATCATCCGTCTGCTATAGTCTAC TAGTACTTGCATTGCGGGGAGGGAGACACCTATTCTGCTAAGCTGCCCACGGCCATGGAG TCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTAC CTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATG TTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAG TACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCC AACGTCGAGCACATCCTCAAGACCAACTTCGCCAACTACGGCAAGGGCCCGATGACCCAC GACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGG CAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGC GCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTCCGGCGGCG AAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTC TTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGCAAGGAGGGCTTG GTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCTTCGACCTG CTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGCAGTCGATC CGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGAACAGATGAGCAGA GAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCGAGAGGGAG AAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACTTCGTCATC GCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCTGCAAGAAC CAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCGACCGCGAC GTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGACGCCATCAACAAGATGCAGTAC CTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCGATGTCAAA TACTGCTTCTCGGATGACACGTTGCCGGACGGGCACGCGGTGAAGAAAGGAGACATGGTG AACTACCAACCGTACCCCATGGGCAGGATGAAGTTCCTGTGGGGCGACGACGCCGAGGAG TTCAAGCCGGAGCGGTGGCTCGATGACAGTGGTATGTTCGTCGCCGAGAGCCCCTTCAAG TTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGGGAAGGAGTTCGCGTACAGGCAG ATGAAGATCGTTTCGGCTGTCCTTCTCTACTTCTTCAGATTCGAGATGTGGGATGACGAC GCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGC GCATTGGCCCGGTGAAGCTTCACACCATATCAAAAGTTCAAAACTCAAGGGCGGCGCTGG TCTATTTCATCCATTTTGGCGGGGATAATGACGGTTAGATATGGTTGTCGAAGACAACAG TGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGTATTATACTCTTAAAAACTTT TTACTAGAGGGCTATGTGTACTCCCTCCGTTCCACGTAATAAGACACGATCAAACATGAC ACCATCATCAAAATTAATCTGACTTAAAA



consensusID : consensus_13390#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1862
fasta sequence
                              [AAGCTGCCCACGGCCATGGAGTCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACGTCGAGCACATCCTCAAGACCAACTTCGCCAACTACGGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCTTCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGCAGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGAACAGATGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCGAGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACTTCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCTGCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCGACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGACGCCATCAACAAGATGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCGTGAGTACTGTTGTTGGTCTTTTTTTTTTTCGAATAAGAGGGCAGGAGGACTGCTACTGTTGTTGGTCTTGATTTTTTTTTTCTGAAGGTAGAAACTGCAGCGCATTTGTTACGTGGCTGTGTTTGCGCTGTAGGATGTCAAATACTGCTTCTCGGATGGCACGTTGCCGGACGGGCACGCGGTGAAGAAAGGAGACATGGTGAACTACCAACCGTACCCCATGGGCAGGATGAAGTTCCTGTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATGACAGTGGTATGTTCGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGGGAAGGAGTTCGCGTACAGGCAGATGAAGATCGTTTCGGCTGTCCTTCTCTACTTCTTCAGATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCAAAAGTTCAAAACTCAAGGGCGGCGCTGGTCTATTTCATCCATTTTGGCGGGGATAATGACGGTTAGATATGGTTGTCGAAGACAACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGTATTATACTCTTAAAAACTTTTTACTAGAGGGCTATGTGTACTCCCTC]

[+] EMBL AK061650             [AAGCTGCCCACGGCCATGGAGTCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACGTCGAGCACATCCTCAAGACCAACTTCGCCAACTACGGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCTTCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGCAGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGAACAGATGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCGAGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACTTCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCTGCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCGACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGACGCCATCAACAAGATGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCGTGAGTACTGTTGTTGGTCTTTTTTTTTTTCGAATAAGAGGGCAGGAGGACTGCTACTGTTGTTGGTCTTGATTTTTTTTTTCTGAAGGTAGAAACTGCAGCGCATTTGTTACGTGGCTGTGTTTGCGCTGTAGGATGTCAAATACTGCTTCTCGGATGGCACGTTGCCGGACGGGCACGCGGTGAAGAAAGGAGACATGGTGAACTACCAACCGTACCCCATGGGCAGGATGAAGTTCCTGTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATGACAGTGGTATGTTCGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGGGAAGGAGTTCGCGTACAGGCAGATGAAGATCGTTTCGGCTGTCCTTCTCTACTTCTTCAGATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCAAAAGTTCAAAACTCAAGGGCGGCGCTGGTCTATTTCATCCATTTTGGCGGGGATAATGACGGTTAGATATGGTTGTCGAAGACAACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGTGTATTATACTCTTAAAAACTTTTTACTAGAGGGCTATGTGTACTCCCTC]
[+] EMBL CA998062             [       CCACGGCCATGGAGTCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACGTCGAGCACATCCTCAAGACCAACTTCGCCAACTACGGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_13390#1 AAGCTGCCCACGGCCATGGAGTCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTG CTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTAT CCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTAC CACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTAC GTCTACACCGTCGAGCCGGCCAACGTCGAGCACATCCTCAAGACCAACTTCGCCAACTAC GGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAAC GTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGT GTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATC CTGGAGCGTGGTCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATG CGGGCGACGCTGGACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCC GGATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTG CTGTTCCGATTCTTCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAG GCAACCATGAAGCAGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGG AAGATCGAACAGATGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCG AGGTTTCTGCTCGAGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGAC ATCATACTCAACTTCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTC CTCTACGCCGTCTGCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGAC GCCACCACCGGCGACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGAC GCCATCAACAAGATGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCT GGCGTTCCCCTCGTGAGTACTGTTGTTGGTCTTTTTTTTTTTCGAATAAGAGGGCAGGAG GACTGCTACTGTTGTTGGTCTTGATTTTTTTTTTCTGAAGGTAGAAACTGCAGCGCATTT GTTACGTGGCTGTGTTTGCGCTGTAGGATGTCAAATACTGCTTCTCGGATGGCACGTTGC CGGACGGGCACGCGGTGAAGAAAGGAGACATGGTGAACTACCAACCGTACCCCATGGGCA GGATGAAGTTCCTGTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATG ACAGTGGTATGTTCGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCAC GAATCTGCTTGGGGAAGGAGTTCGCGTACAGGCAGATGAAGATCGTTTCGGCTGTCCTTC TCTACTTCTTCAGATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGC TGACTCTGAAAATGGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACAC CATATCAAAAGTTCAAAACTCAAGGGCGGCGCTGGTCTATTTCATCCATTTTGGCGGGGA TAATGACGGTTAGATATGGTTGTCGAAGACAACAGTGCTCCTAAGGTGTAGGTATGTAAG AAAAATAACGTGTGTATTATACTCTTAAAAACTTTTTACTAGAGGGCTATGTGTACTCCC TC



consensusID : consensus_13390#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 936
fasta sequence
                              [CGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACGTCGAGCACATCCTCAAGACCAACTTTGCCAACTACGGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGCCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGAAGGAGGGCTTGGTGTTTGCCGGGCGTTCGAGACGCGAGCGAGCAGTGCTGTACCATTCTTCGACCTGTCTGGAGGTAAGAGGTACTCACATCTCTGCGGAGCACCATGAACATTCGTCCGACCATCACACTTGTTTCTCATCTGGCCGGAGATCACAGTGACCTAAGCACCCAATTTCCCAAAGAGGCCTCTGGCTGGTTCCGCTTAAGGTAAAGTTCCGTTGTTTACAAAGGCTTAGGACTATTCTATCTGTTGATTGACTGACAAGAGGTCACTGCGTACTTTTTGCAATACCTATCTACGCTGCGTGTTATTGGCATCCCGCTCGTCCATCTGTCACCATCGCACACAT]

[+] EMBL BE039709             [CGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACCGCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACGTCGAGCACATCCTCAAGACCAACTTTGCCAACTACGGCAAGGGCCCGATGACCCACGACGTGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGCCCGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGAAGGAGGGCTTGGTGTTTGCCGGGCGTTCGAGACGCGAGCGAGCAGTGCTGTACCATTCTTCGACCTGTCTGGAGGTAAGAGGTACTCACATCTCTGCGGAGCACCATGAACATTCGTCCGACCATCACACTTGTTTCTCATCTGGCCGGAGATCACAGTGACCTAAGCACCCAATTTCCCAAAGAGGCCTCTGGCTGGTTCCGCTTAAGGTAAAGTTCCGTTGTTTACAAAGGCTTAGGACTATTCTATCTGTTGATTGACTGACAAGAGGTCACTGCGTACTTTTTGCAATACCTATCTACGCTGCGTGTTATTGGCATCCCGCTCGTCCATCTGTCACCATCGCACACAT]


>consensus_13390#2 CGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTACCTCG CGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATGTTCC ACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCGCAAGTACC GCACCTTCCGCATGCTCACCCCGACCTGCAACTACGTCTACACCGTCGAGCCGGCCAACG TCGAGCACATCCTCAAGACCAACTTTGCCAACTACGGCAAGGGCCCGATGACCCACGACG TGCTGGAGGACCTCCTCGGCGACGGGATCTTCAACGTGGACGGCGGCATGTGGCGGCAGC AGCGCAAGGTCGCCAGCCTCGAGTTCTCCACCCGTGTGCTGCGGGACTACAGCAGCGCCG TGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGCCCGGCGGCGAAGG GGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGGACTCTTTCTTCA GGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGAAGGAGGGCTTGGTGTT TGCCGGGCGTTCGAGACGCGAGCGAGCAGTGCTGTACCATTCTTCGACCTGTCTGGAGGT AAGAGGTACTCACATCTCTGCGGAGCACCATGAACATTCGTCCGACCATCACACTTGTTT CTCATCTGGCCGGAGATCACAGTGACCTAAGCACCCAATTTCCCAAAGAGGCCTCTGGCT GGTTCCGCTTAAGGTAAAGTTCCGTTGTTTACAAAGGCTTAGGACTATTCTATCTGTTGA TTGACTGACAAGAGGTCACTGCGTACTTTTTGCAATACCTATCTACGCTGCGTGTTATTG GCATCCCGCTCGTCCATCTGTCACCATCGCACACAT



consensusID : consensus_13390#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 498
fasta sequence
                              [AGGGAGTTTTCCCGGCAAGTACCCGCACCTTTCGGNTGCTNACCCCGGACNTGAAATAAGNTTTAACACCGTGGAGCNGNCCAANGTGGAGNACATCTTTCAAGACCAANTTTTGCNAANTACGGCAAGGGCCNGAGACCCCAGACGTGTTGGAGGACTTCTTTGGGGGACGGGATTTTCAANGTGGANGGCGGCATGTGGCGGCAGCAGCGCAAGTTCCCCAGCTTNGAGTTCTCCNACCCGTGTGCTGNGGGANNACAGCAGCGCNGTGTTCCGGGACACCNCCGCGGAGNTCGCCGGCATCTTGGAGCGTGTTCCGGCGGNGAAGGGGCGGGAGAGGNGAACATGCAGNATCTGCTGATGCGGGNGACGCTGGATTCTTTNTTCAGGGTGGTTTNGGGTCAACCTTGGGTGNTNTCCGNATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTNGACGACGCGAGCGAGCAGTGCTGTTCCGATCTTCGACTC]

[-] EMBL BE228790             [AGGGAGTTTTCCCGGCAAGTACCCGCACCTTTCGGNTGCTNACCCCGGACNTGAAATAAGNTTTAACACCGTGGAGCNGNCCAANGTGGAGNACATCTTTCAAGACCAANTTTTGCNAANTACGGCAAGGGCCNGAGACCCCAGACGTGTTGGAGGACTTCTTTGGGGGACGGGATTTTCAANGTGGANGGCGGCATGTGGCGGCAGCAGCGCAAGTTCCCCAGCTTNGAGTTCTCCNACCCGTGTGCTGNGGGANNACAGCAGCGCNGTGTTCCGGGACACCNCCGCGGAGNTCGCCGGCATCTTGGAGCGTGTTCCGGCGGNGAAGGGGCGGGAGAGGNGAACATGCAGNATCTGCTGATGCGGGNGACGCTGGATTCTTTNTTCAGGGTGGTTTNGGGTCAACCTTGGGTGNTNTCCGNATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTNGACGACGCGAGCGAGCAGTGCTGTTCCGATCTTCGACTC]


>consensus_13390#3 AGGGAGTTTTCCCGGCAAGTACCCGCACCTTTCGGNTGCTNACCCCGGACNTGAAATAAG NTTTAACACCGTGGAGCNGNCCAANGTGGAGNACATCTTTCAAGACCAANTTTTGCNAAN TACGGCAAGGGCCNGAGACCCCAGACGTGTTGGAGGACTTCTTTGGGGGACGGGATTTTC AANGTGGANGGCGGCATGTGGCGGCAGCAGCGCAAGTTCCCCAGCTTNGAGTTCTCCNAC CCGTGTGCTGNGGGANNACAGCAGCGCNGTGTTCCGGGACACCNCCGCGGAGNTCGCCGG CATCTTGGAGCGTGTTCCGGCGGNGAAGGGGCGGGAGAGGNGAACATGCAGNATCTGCTG ATGCGGGNGACGCTGGATTCTTTNTTCAGGGTGGTTTNGGGTCAACCTTGGGTGNTNTCC GNATCCAGCAAGGAGGGCTTGGTGTTTGCCAGGGCGTTNGACGACGCGAGCGAGCAGTGC TGTTCCGATCTTCGACTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13390#0      ATACCGGACCACAAGCAGTAACTGGAAGTGGATCAACATCATCCGTCTGCTATAGTCTAC 60
consensus_13390#1      ------------------------------------------------------------
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      TAGTACTTGCATTGCGGGGAGGGAGACACCTATTCTGCTAAGCTGCCCACGGCCATGGAG 120
consensus_13390#1      ---------------------------------------AAGCTGCCCACGGCCATGGAG 21
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      TCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTAC 180
consensus_13390#1      TCGCCGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTAC 81
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ----CGCTGAGCCATCCGGCGATGGTCGCCTTGTCGCTGCTGCTACTCGTGGCGCTCTAC 56
                                                                                   

consensus_13390#0      CTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATG 240
consensus_13390#1      CTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATG 141
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      CTCGCGCGCCGCGCCGTGCTGGGGAAGAAACGCAGGTATCCGCCCGTGGCCGGCACCATG 116
                                                                                   

consensus_13390#0      TTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCG-CAA 299
consensus_13390#1      TTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCG-CAA 200
consensus_13390#3      ------------------------------------------AGGGAGTTTTCCCGGCAA 18
consensus_13390#2      TTCCACCAGCTGCTCAACTTCGGCCGCTTGCTGGAGTACCACACGGAGCTCTCCCG-CAA 175
                                                                 * **** * ***** ***

consensus_13390#0      GTACC-GCACCTTCCGCATGCTCACCCCG-ACCTGCAACTACGTCTA-CACCGTCGAGCC 356
consensus_13390#1      GTACC-GCACCTTCCGCATGCTCACCCCG-ACCTGCAACTACGTCTA-CACCGTCGAGCC 257
consensus_13390#3      GTACCCGCACCTTTCGGNTGCTNACCCCGGACNTGAAATAAGNTTTAACACCGTGGAGCN 78
consensus_13390#2      GTACC-GCACCTTCCGCATGCTCACCCCG-ACCTGCAACTACGTCTA-CACCGTCGAGCC 232
                       ***** ******* **  **** ****** ** ** **  *  * ** ****** **** 

consensus_13390#0      GGCCAACGTCGAGCACATCCT-CAAGACCAACTTC-GCCAACTACGGCAAGGGCCCGATG 414
consensus_13390#1      GGCCAACGTCGAGCACATCCT-CAAGACCAACTTC-GCCAACTACGGCAAGGGCCCGATG 315
consensus_13390#3      GNCCAANGTGGAGNACATCTTTCAAGACCAANTTTTGCNAANTACGGCAAGGGCCNGA-G 137
consensus_13390#2      GGCCAACGTCGAGCACATCCT-CAAGACCAACTTT-GCCAACTACGGCAAGGGCCCGATG 290
                       * **** ** *** ***** * ********* **  ** ** ************* ** *

consensus_13390#0      ACCCACGACGTGCTGGAGGACCTCCTCGGCG-ACGGGATCTTCAACGTGGACGGCGGCAT 473
consensus_13390#1      ACCCACGACGTGCTGGAGGACCTCCTCGGCG-ACGGGATCTTCAACGTGGACGGCGGCAT 374
consensus_13390#3      ACCCCAGACGTGTTGGAGGACTTCTTTGGGGGACGGGATTTTCAANGTGGANGGCGGCAT 197
consensus_13390#2      ACCCACGACGTGCTGGAGGACCTCCTCGGCG-ACGGGATCTTCAACGTGGACGGCGGCAT 349
                       ****  ****** ******** ** * ** * ******* ***** ***** ********

consensus_13390#0      GTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCA-CCCGTGTGCTGCGGGACT 532
consensus_13390#1      GTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCA-CCCGTGTGCTGCGGGACT 433
consensus_13390#3      GTGGCGGCAGCAGCGCAAGTTCCCCAGCTTNGAGTTCTCCNACCCGTGTGCTGNGGGANN 257
consensus_13390#2      GTGGCGGCAGCAGCGCAAGGTCGCCAGCCTCGAGTTCTCCA-CCCGTGTGCTGCGGGACT 408
                       ******************* ** ***** * *********  *********** ****  

consensus_13390#0      ACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTC 592
consensus_13390#1      ACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGTC 493
consensus_13390#3      ACAGCAGCGCNGTGTTCCGGGACACCNCCGCGGAGNTCGCCGGCATCTTGGAGCGTGTTC 317
consensus_13390#2      ACAGCAGCGCCGTGTTCCGCGACACCGCCGCGGAGCTCGCCGGCATCCTGGAGCGTGGCC 468
                       ********** ******** ****** ******** *********** *********  *

consensus_13390#0      CGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGG 652
consensus_13390#1      CGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGG 553
consensus_13390#3      CGGCGGNGAAGGGGCGGGAGAGGN-GAACATGCAGNATCTGCTGATGCGGGNGACGCTGG 376
consensus_13390#2      CGGCGGCGAAGGGGCGGGAGAGGGTGGACATGCAGGATCTGCTGATGCGGGCGACGCTGG 528
                       ****** ****************  * ******** *************** ********

consensus_13390#0      ACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGCAAGG 712
consensus_13390#1      ACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAGCAAGG 613
consensus_13390#3      ATTCTTTNTTCAGGGTGG--TTTNGGGTCAACCTTGG-GTGNTNTCCGNATCCAGCAAGG 433
consensus_13390#2      ACTCTTTCTTCAGGGTTGGTTTCGGGGTCAACCTTGGCGTGCTCTCCGGATCCAG-AAGG 587
                       * ***** ******** *  **  ************* *** * **** ****** ****

consensus_13390#0      AGGGCTTGGTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCT 772
consensus_13390#1      AGGGCTTGGTGTTTGCCAGGGCGTTCGACGACGCGAGCGAGCAGGTGCTGTTCCGATTCT 673
consensus_13390#3      AGGGCTTGGTGTTTGCCAGGGCGTTNGACGACGCGAGCGAGCAG-TGCTGTTCCGAT-CT 491
consensus_13390#2      AGGGCTTGGTGTTTGCC-GGGCGTTCGA-GACGCGAGCGAGCAG-TGCTGTACC-ATTCT 643
                       ***************** ******* ** *************** ****** ** ** **

consensus_13390#0      TCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGC 832
consensus_13390#1      TCGACCTGCTCTGGAAGGTCAAGAGGTTTCTCAACATCTCGTCGGAGGCAACCATGAAGC 733
consensus_13390#3      TCGACTC----------------------------------------------------- 498
consensus_13390#2      TCGACCTG-TCTGGAGG--TAAGAGGTACTC--ACATCTCTGCGGAGC--ACCATGAA-C 695
                       *****                                                       

consensus_13390#0      AGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGAACAGA 892
consensus_13390#1      AGTCGATCCGCACCATCAACGACTTCGTGTACTCCATCATCGACAGGAAGATCGAACAGA 793
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ATTCG-TCCG-ACCATCA-------CACTTGTTTC-TCATCTGGCCGGAGATC--ACAG- 742
                                                                                   

consensus_13390#0      TGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCG 952
consensus_13390#1      TGAGCAGAGAGCAACACGAATTCGCCAAGAAAGAGGACATACTGTCGAGGTTTCTGCTCG 853
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      TGACCTAAGCAC----CCAATTTCCCAAAGAGGC-------CTCTGGCTGGTTCCGCTTA 791
                                                                                   

consensus_13390#0      AGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACT 1012
consensus_13390#1      AGAGGGAGAAGGATCCCGGCTGCTTCGACAACAAGTACATCAGGGACATCATACTCAACT 913
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      AGGTAAAG------TTCCGTTGTTT-----ACAAAGGCTT--AGGAC----TATTCTATC 834
                                                                                   

consensus_13390#0      TCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCT 1072
consensus_13390#1      TCGTCATCGCCGGCCGCGACACGACGGCGGGGACGCTGTCGTGGTTCCTCTACGCCGTCT 973
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      TGTTGATTGACTGACAAGAGGTCACTGCGTACTTTTTGCAATACCTA-TCTACGCTGCGT 893
                                                                                   

consensus_13390#0      GCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCG 1132
consensus_13390#1      GCAAGAACCAGCGCGTACAGGACAAGATCGCGAGGGAAGTGCGCGACGCCACCACCGGCG 1033
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      GTTATTGGCATCCCGCTCGTCCATCTGTCACCATCGCA-CACAT---------------- 936
                                                                                   

consensus_13390#0      ACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGACGCCATCAACAAGA 1192
consensus_13390#1      ACCGCGACGTCGGCGTCCAGGATTTCTCTTCATTTCTGACAGAAGACGCCATCAACAAGA 1093
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      TGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCG 1252
consensus_13390#1      TGCAGTACCTACACGCAGCGTTGACGGAGACGCTCCGGTTGTACCCTGGCGTTCCCCTCG 1153
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      ------------------------------------------------------------
consensus_13390#1      TGAGTACTGTTGTTGGTCTTTTTTTTTTTCGAATAAGAGGGCAGGAGGACTGCTACTGTT 1213
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      ------------------------------------------------------------
consensus_13390#1      GTTGGTCTTGATTTTTTTTTTCTGAAGGTAGAAACTGCAGCGCATTTGTTACGTGGCTGT 1273
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      --------------ATGTCAAATACTGCTTCTCGGATGACACGTTGCCGGACGGGCACGC 1298
consensus_13390#1      GTTTGCGCTGTAGGATGTCAAATACTGCTTCTCGGATGGCACGTTGCCGGACGGGCACGC 1333
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      GGTGAAGAAAGGAGACATGGTGAACTACCAACCGTACCCCATGGGCAGGATGAAGTTCCT 1358
consensus_13390#1      GGTGAAGAAAGGAGACATGGTGAACTACCAACCGTACCCCATGGGCAGGATGAAGTTCCT 1393
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      GTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATGACAGTGGTATGTT 1418
consensus_13390#1      GTGGGGCGACGACGCCGAGGAGTTCAAGCCGGAGCGGTGGCTCGATGACAGTGGTATGTT 1453
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      CGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGG 1478
consensus_13390#1      CGTCGCCGAGAGCCCCTTCAAGTTCACGGCGTTCCAGGCGGGGCCACGAATCTGCTTGGG 1513
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      GAAGGAGTTCGCGTACAGGCAGATGAAGATCGTTTCGGCTGTCCTTCTCTACTTCTTCAG 1538
consensus_13390#1      GAAGGAGTTCGCGTACAGGCAGATGAAGATCGTTTCGGCTGTCCTTCTCTACTTCTTCAG 1573
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      ATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAAT 1598
consensus_13390#1      ATTCGAGATGTGGGATGACGACGCCACCGTGGGTTATAGGCCGATGCTGACTCTGAAAAT 1633
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      GGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCAAAAGTT 1658
consensus_13390#1      GGATGGCCCGTTCTATCTCCGCGCATTGGCCCGGTGAAGCTTCACACCATATCAAAAGTT 1693
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      CAAAACTCAAGGGCGGCGCTGGTCTATTTCATCCATTTTGGCGGGGATAATGACGGTTAG 1718
consensus_13390#1      CAAAACTCAAGGGCGGCGCTGGTCTATTTCATCCATTTTGGCGGGGATAATGACGGTTAG 1753
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      ATATGGTTGTCGAAGACAACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGT 1778
consensus_13390#1      ATATGGTTGTCGAAGACAACAGTGCTCCTAAGGTGTAGGTATGTAAGAAAAATAACGTGT 1813
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      GTATTATACTCTTAAAAACTTTTTACTAGAGGGCTATGTGTACTCCCTCCGTTCCACGTA 1838
consensus_13390#1      GTATTATACTCTTAAAAACTTTTTACTAGAGGGCTATGTGTACTCCCTC----------- 1862
consensus_13390#3      ------------------------------------------------------------
consensus_13390#2      ------------------------------------------------------------
                                                                                   

consensus_13390#0      ATAAGACACGATCAAACATGACACCATCATCAAAATTAATCTGACTTAAAA 1889
consensus_13390#1      ---------------------------------------------------
consensus_13390#3      ---------------------------------------------------
consensus_13390#2      ---------------------------------------------------
                                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)