These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13407#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1613 fasta sequence [CGCCTCCACTTTCCCTTCCCTTCCTCCTCCACCTCCACCTCCTCGTCGCGATCCAAATCCGAATCCGGCCATGGACGCCGGGGCGCAGCCGCCGGACACGGAGATGGCGGAGGCCGGCGGCGGGCAGCAGCCGCCTGCTGCGGCTGCGGCGGCGGGGGCGGGGGCAGGGGCGGGGATGATGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG-TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCAC-TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA-GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT-CCCT-GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA-TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCATTTTCTTGTCAAAAAAA] [+] EMBL AK111942 [CGCCTCCACTTTCCCTTCCCTTCCTCCTCCACCTCCACCTCCTCGTCGCGATCCAAATCCGAATCCGGCCATGGACGCCGGGGCGCAGCCGCCGGACACGGAGATGGCGGAGGCCGGCGGCGGGCAGCAGCCGCCTGCTGCGGCTGCGGCGGCGGGGGCGGGGGCAGGGGCGGGGATGATGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCACATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGACCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTATGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCCCTGAATATACTGCAGCAATTGATGTGTGGTCTGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATCGGAACGCCAAATGAGGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCAC TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT CCCT GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCA ] [+] EMBL AK111691 [ CCTCCACTTTCCCTTCCCTTCCTCCTCCACCTCCACCTCCTCGTCGCGATCCAAATCCGAATCCGGCCATGGACGCCGGGGCGCAGCCGCCGGACACGGAGATGGCGGAGGCCGGCGGCGGGCAGCAGCCGCCTGCTGCGGCTGCGGCGGCGGGGGCGGGGGCAGGGGCGGGGATGATGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCACATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGACCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTATGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTGTTTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCTGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATCGGAACGCCAAATGAGGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCAC TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT CCCT GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCATTTTCTTGTC ] [+] EMBL OSA535841 [ TCCTCGTCGCGATCCAAATCCGAATCCGGCCATGGACGCCGGGGCGCAGCCGCCGGACACGGAGATGGCGGAGGCCGGCGGCGGGCAGCAGCCGCCTGCTGCGGCTGCGGCGGCGGGGGCGGGGGCAGGGGCGGGGATGATGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCACATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGACCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTATGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCTGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATCGGAACGCCAAATGAGGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCAC TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT CCCT GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCATTTTCTTGTC ] [+] EMBL CB617797 [ TGGAGACCATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCGCA ] [+] EMBL CB617798 [ TGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTTCTGAA ] [+] EMBL CB617835 [ TGGAGACCTTCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGC ] [+] EMBL CB617768 [ TGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACAT ] [+] EMBL CB617836 [ TGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTAA ] [+] EMBL CB617796 [ TGGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGGGAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGCCTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAAGATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCTGCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACAAAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCAAATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGATTCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAGCAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTACCACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGAACTTCTG TTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTATTTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATTACGTCTACTAATGGAGCTCATTGGAACGCCAAATGAAGCTGATCTGGATTTTGTA ] [-] EMBL CB966430 [ GTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGCCAGTCCTTTCCTGAAAAATTTCCGCATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCGC TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTC ATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT CCCT GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTCATGTGGGATTTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCAGCGGTTATCATCAAATTTCCCATTTTCTTGTCgat ] [+] EMBL BM421147 [ CTTGCACATCCTTACCTGGCATCAC TGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGA GCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCTCCCCT GGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTCCGGTTATCATCAAATTCCCCATTTTCTTGTCAAAAAA ] [+] EMBL BM419547 [ GGCATCACGTGCATGACATAAGTGATGACCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGACNCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGCCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCT CCCTGGGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCATTTTCTTGTCAAAAAAA] consensusID : consensus_13407#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence [GCCTGATTAGGCCGAGACAAGGGGGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCACTGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGAGCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCTCCCTGGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGATTTTTTTCCATTTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTTTGCGGTTATCATCAAAAAAAAAAAAA] [-] EMBL CA760368 [GCCTGATTAGGCCGAGACAAGGGGGCTGATCTGGATTTTGTAAATGAAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAAAATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATCCTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCACTGCATGACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGAGCAGCATGCATTGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATTACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCCTCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGAAAAATCCTCCCTGGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGATCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGATTTTTTTCCATTTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGATGACGGCCTAAATTTTGCGGTTATCATCAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13407#0 CGCCTCCACTTTCCCTTCCCTTCCTCCTCCACCTCCACCTCCTCGTCGCGATCCAAATCC 60 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 GAATCCGGCCATGGACGCCGGGGCGCAGCCGCCGGACACGGAGATGGCGGAGGCCGGCGG 120 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 CGGGCAGCAGCCGCCTGCTGCGGCTGCGGCGGCGGGGGCGGGGGCAGGGGCGGGGATGAT 180 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 GGAGAACATCCAGGCGACGCTGAGCCATGGCGGGAGGTTCATCCAGTACAACATCTTCGG 240 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 GAACGTGTTCGAGGTCACCGCCAAGTACAAGCCCCCCATCCTCCCCATCGGCAAGGGCGC 300 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 CTACGGCATCGTCTGCTCGGCGCTCAACTCGGAGACGGGGGAGCAGGTGGCGATCAAGAA 360 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 GATCGCCAACGCGTTCGACAACAAGATCGACGCCAAGCGCACGCTCAGGGAGATCAAGCT 420 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 GCTCCGCCATATGGACCACGAGAATATTGTTGCCATAAGGGATATCATACCTCCTCCACA 480 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 AAGGAATTCATTCAATGACGTTTATATTGCATATGAATTGATGGATACTGATCTGCATCA 540 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 AATTATTCGCTCAAATCAAGCATTGTCAGAGGAGCACTGCCAGTATTTCCTTTATCAGAT 600 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 TCTCCGTGGCTTGAAGTATATACATTCAGCAAATGTCCTTCACCGAGACTTGAAGCCCAG 660 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 CAACCTACTTTTGAATGCAAATTGTGATCTCAAAATTTGTGATTTTGGACTTGCTCGTAC 720 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 CACCTCAGAAACCGATTTTATGACTGAGTACGTTGTCACAAGATGGTATAGGGCACCGGA 780 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 ACTTCTGTTGAATTCCTCTGAATATACTGCAGCAATTGATGTGTGGTCCGTGGGCTGTAT 840 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 TTTTATGGAACTCATGGATCGTAAACCTTTGTTTCCTGGAAGAGATCATGTCCATCAATT 900 consensus_13407#1 ------------------------------------------------------------ consensus_13407#0 ACGTCTACTAATGGAGCTCATTGGAACGCCA-AATGAAGCTGATCTGGATTTTGTAAATG 959 consensus_13407#1 --------------GCCTGATTAGGCCGAGACAAGGGGGCTGATCTGGATTTTGTAAATG 46 ** *** * ** * ** * ********************** consensus_13407#0 AAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAA 1019 consensus_13407#1 AAAATGCAAGAAGATACATTCGCCAACTTCCTAGACATGCAAGGCAGTCCTTTCCTGAAA 106 ************************************************************ consensus_13407#0 AATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATC 1079 consensus_13407#1 AATTTCCACATGTTCATCCTTTAGCAATTGATCTGGTTGAAAAGATGCTGACATTTGATC 166 ************************************************************ consensus_13407#0 CTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCACTGCATG 1139 consensus_13407#1 CTAGACAGAGAATAACAGTTGAAGGTGCCCTTGCACATCCTTACCTGGCATCACTGCATG 226 ************************************************************ consensus_13407#0 ACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGAGCAGCATGCAT 1199 consensus_13407#1 ACATAAGTGATGAGCCAGTCTGCTCATCACCCTTCAGCTTTGACTTCGAGCAGCATGCAT 286 ************************************************************ consensus_13407#0 TGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATT 1259 consensus_13407#1 TGTCCGAGGAACAAATGAAGGATCTAATCTACCAAGAAGGCCTTGCGTTCAACCCTGATT 346 ************************************************************ consensus_13407#0 ACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCC 1319 consensus_13407#1 ACCAGTAGCTGGTGTTCTATTTCAGCCTTGGATTGATTCTATTCATATGGAGTTTTTTCC 406 ************************************************************ consensus_13407#0 TCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGA 1379 consensus_13407#1 TCCTGCGCCACAAAAGGTCGCCGACAGTGATCACTAGTTGTAAATAATTGCCTCACCTGA 466 ************************************************************ consensus_13407#0 AAAATCCTCCCTGGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGA 1439 consensus_13407#1 AAAATCCTCCCTGGTTCAAAGCTGAAGGTGTTGTTCTAAGAGTAGAAATGTACTTTGTGA 526 ************************************************************ consensus_13407#0 TCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA 1499 consensus_13407#1 TCAAGTTCCTGGGTAGCTGCTATGCCATTCTTATGCTTATGTATGTTGTTTAATGTGGGA 586 ************************************************************ consensus_13407#0 TTTTTTTCCATCTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGAT 1559 consensus_13407#1 TTTTTTTCCATTTTAAATGTTTTTAGTCCCTTTTGTAAGAAGAGTTAGTTCATGAACGAT 646 *********** ************************************************ consensus_13407#0 GACGGCCTAAATTCTGCGGTTATCATCAAATTCCCCATTTTCTTGTCAAAAAAA 1613 consensus_13407#1 GACGGCCTAAATTTTGCGGTTATCATCAAA--------------AAAAAAAAAA 686 ************* **************** ******* |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||