cluster # 1341

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Oryza sativa
cluster # 1341 cluster # 1341 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1341#0 length = 608 sequences # 2

consensusID : consensus_1341#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 608
fasta sequence

                              [CGCGACAGCTTCGGACCAGTCCGCCGCACCCACGGTTCGGCCGGACCCCCGACCCAACGCCTCAGACCCAATCCTTTTCCCGAAGTTACGGATCCGTTTTCCGACTTCCTGGCTACATTGTTCCATTGCCCAGAGGCTGTTCA-CTTGGGAGACCTGATCGTTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGCCGCTGGACCACTACCTCCGGCTGAACCGTTTCCAGGGTT-GCGGCCGTTAAGCAAGAAAAGATAACTCTTCCCGA-GCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCAGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTCCCGTTCACATGGAACCTTTCTCCTCTTCGCCCTTCAAAGTTCTCATTTG-AATATTGCTACTACCACC--AAG--A-TCTGCACCGACGCCGCTCCGCCCGGCTCGCGCCCCGGTTTTTCGCGC]

[+] EMBL BI799150             [CGCGACAGCTTCGGACCAGTCCGCCGCACCCACGGTTCGGCCGGACCCCCGACCCAACGCCTCAGACCCAATCCTTTTCCCGAAGTTACGGATCCGTTTTCCGACTTCCTGGCTACATTGTTCCATTGCCCAGAGGCTGTTCA CTTGGGAGACCTGATCGTTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGCCGCTGGACCACTACCTCCGGCTGAACCGTTTCCAGGGTT GCGGCCGTTAAGCAAGAAAAGATAACTCTTCCCGA GCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCAGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTCCCGTTCACATGGAACCTTTCTCCTCTTCGCCCTTCAAAGTTCTCATTTG AATATTGCTACTACCACC  AAG  A TCTGCACCGACGCCGCTCCGCCCGGCTCGCGCCCCGGTTTTTCGCGC]
[+] EMBL BI799176             [                                                                                                                                  tAGAAGAGGTTCACCCTTGGAGACCTGATCGTTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCGCCGCTGGACC CTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGCCGTTAAGC AGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCAGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCGTGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCATGTGCAAGTCCCGTTCACAGGGAACCTTTCTCCTCTTCGCCCTTCAAAGTTCTCAATTGAAATATTGCTACTACCACCCAAAGGAATTCTGCACCGACGCCGCTCC CCCGGCTCGC CCCCGGT         ]




>consensus_1341#0
CGCGACAGCTTCGGACCAGTCCGCCGCACCCACGGTTCGGCCGGACCCCCGACCCAACGC
CTCAGACCCAATCCTTTTCCCGAAGTTACGGATCCGTTTTCCGACTTCCTGGCTACATTG
TTCCATTGCCCAGAGGCTGTTCACTTGGGAGACCTGATCGTTTATGAGTACGACCGGGCG
TGGACGGTACTCGGTCCTCCGGATTTTCAAGGCCGCCGGGGGCGCACCGGACACCGCGCG
ACGTGCGGTGCTCTTCCGCCGCTGGACCACTACCTCCGGCTGAACCGTTTCCAGGGTTGC
GGCCGTTAAGCAAGAAAAGATAACTCTTCCCGAGCCCCCGCCGGCGTCTCCGGACTTCCT
AACGTCGCCGTCAACCAGCCACGTCCCGGCTCGGGAAATCTTAACCCGATTCCCTTTCGG
GGCACGCGCGTGTCGCGCTCTCTGCCGGGGTTACCCCGTCCCTTAGGATCGGCTTACCCA
TGTGCAAGTCCCGTTCACATGGAACCTTTCTCCTCTTCGCCCTTCAAAGTTCTCATTTGA
ATATTGCTACTACCACCAAGATCTGCACCGACGCCGCTCCGCCCGGCTCGCGCCCCGGTT
TTTCGCGC

clustalw multiple alignements is not computed in this case