These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13412#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1252 fasta sequence [CTCGTCTCTCTCTCCCCAACCTACTCTCTTCTCCTGCAGTCCAGCTCTCGGTTCCTTGCTCCTCCAAGTCTCCGTCGGATCCATCCTCCCCTACCCCGCGAAACCCTAGCCTCCCGAGCCCCTCGCCGCCGGCGGA-TGGCGACGGCTTGATCGGCCCTGGACACCCGCCCCGCCTCGCCTCGCCTCTGCCTCTCCCCGCTCCCCCCGCGCATCTGATGTTCCTCTCCCGCATCGTCCTCCGCGACCTGGACTCCATCGACTCCCCCGCCGCCTCCATGGCGTCCTCCAAGAAGCTGGTGACGCGTGACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA-TAGAGAAAA--CTGTAGCACTTT-TGGTT--TTT-GAAGATATAAAGAACT-GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA-GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC-AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA-CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCA-GCGATTTGAGGCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACACA-TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGC-AAAAAACGTGGAATCA-GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTGATTTGAGTTCAAAAAAAATCTTTTGTCGAACCTTTCACTTCTATTACACGAAATGTT] [+] EMBL AK070766 [CTCGTCTCTCTCTCCCCAACCTACTCTCTTCTCCTGCAGTCCAGCTCTCGGTTCCTTGCTCCTCCAAGTCTCCGTCGGATCCATCCTCCCCTACCCCGCGAAACCCTAGCCTCCCGAGCCCCTCGCCGCCGGCGGA TGGCGACGGCTTGATCGGCCCTGGACACCCGCCCCGCCTCGCCTCGCCTCTGCCTCTCCCCGCTCCCCCCGCGCATCTGATGTTCCTCTCCCGCATCGTCCTCCGCGACCTGGACTCCATCGACTCCCCCGCCGCCTCCATGGCGTCCTCCAAGAAGCTGGTGACGCGTGACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCA GCGATTTGAGGCCGCTCGGGGGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACACA TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGC AAAAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTG ] [+] EMBL OSC1011 [ CTCCCCAACCTACTCTCTTCTCCTGCAGTCCAGCTCTCGGTTCCTTGCTCCTCCAAGTCTCCGTCGGATCCATCCTCCCCTACCCCGCGAAACCCTAGCCTCCCGAGCCCCTCGNCGNCGG GGAGTGGCGACGGCTTGATCGGCCCTGGACACCCGTCNCGCCTCGNCTCGNCTCTGACTCT ] [+] EMBL AK060384 [ TTCCTTGCTCCTCCAAGTCTCCGTCGGATCCATCCTCCCCTACCCCGCGAAACCCTAGCCTCCCGAGCCCCTCGCCGCCGGCGGA TGGCGACGGCTTGATCGGCCCTGGACACCCGCCCCGCCTCGCCTCGCCTCTGCCTCTCCCCGCTCCCCCCGCGCATCTGATGTTCCTCTCCCGCATCGTCCTCCGCGACCTGGACTCCATCGACTCCCCCGCCGCCTCCATGGCGTCCTCCAAGAAGCTGGTGACGCGTGACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCGCTTGAAGATCCA GCGATTTGAGGCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACACA TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGC AAAAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTGATTT ] [+] EMBL BE041012 [ TCCCCTACCCCGCGAAACCCTAGCCTCCCGAGCCCCTCGCCGCCGGCGGA TGGCGACGGCTTGATCGGCCCTGGACACCCGCCCCGCCTCGCCTCGCCTCTGCCTCTCCCCGCTCCCCCCGCGCATCTGATGTTCCTCTCCCGCATCGTCCTCCGCGACCTGGACTCCATCGACTCCCCCGCCGCCTCCATGGCGTCCTCCAAGAAGCTGGTGACGCGTGACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTCGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGT GCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATG TTATCAACGATTGAA GACC CAAG GAAGTT ATGCTGTC TTGCTACAAGC AAGTTATG GAAAGATCC AAGCT TCTA CC TCTAAAGAgt ] [+] EMBL BF430478 [ ACTCCCCCGCCGCCTCCATGGCGTCCTCCAAGAAGCTGGTGACGCGTGACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCCAAAAGCT CCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAACCCAATTGGACGAAAAGGGAGCATATCCACGAATTAACAATTTCTTCACTGCCGCAC ] [+] EMBL AU223243 [ GACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCNCCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCNCGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT AAAAAAAAAA ] [+] EMBL AU174765 [ ATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATAT ] [+] EMBL CB681212 [ AACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCA GCGATTTGAGGCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACACA TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGC AAAAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTGATTTGAGTTCATTCAACATCTTTTGTCGAACCTTTCACTTCTATTACACGAAATGTT] [-] EMBL BE040347 [ atCTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTNTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCA GCGATTTGAGGCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACACA TTGTACTTTCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCc ] [+] EMBL BI807273 [ TCTTTCTGGAAGAAAGTAGAGAAAAACCTGTAGCACTTTNTGGTTTGTTTGGAAGATATAAAGAACTGGTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAA TTAATGCT CCATTCTTACAAGCC AAGTCATGAGAAAGATCC AAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCATAA CC ACTGGACGAAAAGGCAGCATATCCACGAATCAAC ATTTCTCCACT CCGCACTTGAAGATCCA GCGATTTGA GCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACAC TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTC AATGC AAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCAC TTTTAATCTGTGAAAAATGTTCGATTTGATTTGA ] [+] EMBL BM038010 [ aAACTATTGGATGTTTCCCCACGATTGAACGCCCGCAAGTGAAGTTAATCCTCCCATTCTTACAACCCAAAGTCATGAGAAAGATCC CAAGCTCCCTACCCTTCTAAAGATGTTGATTTGGACTCCAAA CCCACTGGACGAAAA GCAGCATATCCCCGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCACGCGATTTGA GCCGCTCGGGAGGGGATGGCTAAAGAATGTA GCACCATACCCTGACTGTTTTCACACACTTGTACTTTCTGGATCTGTTGTGCTCTTCACCTGCAAGGCT CAACAGTGAATCCCGTGCTTTCTTCGGTCTTTGATCTCAATCCC AAAAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTGATTTGGGTTCAAAAAAAAaa ] [+] EMBL AU174764 [ GGATGTTTCCCAACGATTGAA GNCCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCA GCGATTTGAGGCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCNCCATACCATGACTGTTTTCACACA TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGC AAAAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTGATTTGAGTTCAAAAAAAA ] [+] EMBL CA764653 [ AGAATGTAGGCACCATACCATGACTGTTTT ACACA TTGTACTTTCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGCAAAAAAACGTGGAATCATGAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||