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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13439#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 906 fasta sequence
[TGGCAGGGAAGTCCGGAGTTGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG-GCGGACG-CGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCGACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC-GCCTCGCCGGCGACATGGAGT-GCCAACTCTCC-TGCGCCTTGGGCTCC-TGCCACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGC-TTCGGGCAGTGCTACGACGGCTGCAAGACCACGGCGGC-GGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGTGTTCTCTAGCCCCCATGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGATATCACTGCTCATTTGTTTTAAAAAACTTCTCTGCATTGACAACAAATTGTGTTCT]
[+] EMBL AK069454 [TGGCAGGGAAGTCCGGAGTTGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGGCGCGGACGCCGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCGACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTCTCC TGCGCCTTGGGCTCC TGCCACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGC TTCGGGCAGTGCTACGACGGCTGCAAGACCACGGCGGC GGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGTGTTCTCTAGCCCCCATGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGATATCACTGCTCATTTGTTTTCTTCTCCTTCTCTGCATTGACAACAAATTGTGTTCT]
[+] EMBL AU094982 [ CCGGAGTTGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG GCGGACGCCGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCGACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTCTCC TGCGCCTTGGGCTCC TGCCACCGCCTCCTTCCGGACGGCAAGGGCG ]
[+] EMBL C73381 [ CCGGAGTTGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG NCGGACG CGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCAACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTNTCC TGCGCCTTGGGCTCC TGCNACCGNCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGCTTTCGGGCAGTGCTACGACGGCTNCAAGACCACGGCGGC GGCCAGACTNCCGAGGCCTNTCCGGGCC GNCACTACGT CTCTNTAGT CCCCTGATGACGTAGACCAT ATCCGG ]
[+] EMBL AU182927 [ CCGGAGTTGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGGCGCGGACGCCGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCGACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTCTCC TGCGCCTTGGGCTCC TGCCACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGC TTCGGGCAGTGCTACGACGGCTGCAAGACCACGGCGGC GGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGA ]
[+] EMBL C99084 [ TGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG GCGGACG CGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCGACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTCTCCTTGCG CTTTGGCTCCTTGCCACCG CTCCTTCCGGACGGCAAAGGCGCCGTGGAAGCTTCT TTCGGGCA TTNTANGACGG ]
[+] EMBL C73311 [ GAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG GCGGACG NNACTGCNACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCAACAAGACGTGCCANCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCNTCGCCGGCGACATGGAGT GCCAACTNTCC TGCGCCTTGGGCTCC TGCNACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTNC TTCGGGCAGTGCTACGACGGTTG AAAACCACGGCGG ]
[+] EMBL OSC4521 [ GGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG NCGGACG CGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCAACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTNTCC TGCGCCTTGGGCTCC TGCCACCGCCTTCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGCTTTCGGGCAGTGC ]
[+] EMBL AU094247 [ AGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCTTNGCCGGCGACATGAAGT GCCAACTNTCC TGCGCCTTGGGCTCC TGCCACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGC TTCGGGCAGTGCTACGACGGCTGCAAGACCACGGCGGC GGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGTGTTCTCTAGCCCCCATGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGAaaaaa ]
[+] EMBL AU165805 [ CGTCGTCGTCCCGGCCTCGCCGGCGACATGAAGT G CAACTTTCC TGCGCCTTGGGCTCC TGCCACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGAAGGCCTGC TTCGGGCAGTGCTACGACGGCTGCAAGACCACGGCGGC GGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGTGTTCTCTAGCCCCCATGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGATATCACTGCTCATTTGTTTTAAAAAAaaaaaaaa ]
[+] EMBL BI795677 [ tTGGAGTCCCCAACTCTCC TGCGCCCTTGGCTCC T CCA CGCCTCCTTCCGGAC GCAAG GCCCTGGA GCCTGC TTC GGCAGTGCTACGACGGCTGCAAGACCACGGCGGC GGCCATGCT CCGA GCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGAGTTCTCTAGCCCCCCTGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTGTTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGAC AAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCTACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGAaaaaaaa ]
[+] EMBL AU094300 [ TGCCACCGCTTCNTTCCGGACGGCAAGGGCNCCGTGAAGGCNTGT TTCGGGCAGTGTTACGACGGTTGCAAGACCACGGCGGCGGGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGTGTTCTCTAGCCCCCATGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGATATCACTGCTCATTTGTTTTAAAAAA ]
[+] EMBL C99085 [ TGCTCTCTAGT CCCCTGATGACGTAGACCNTGATCCGGACCACCGCTACGTGTTCTCTAGCCCCC TGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGNGAaaaaaaaaa ]
[+] EMBL AU182926 [ ACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCNCTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAANATAGCGTAGTAGCGTGTGAGTGNCTGTATGCGTGCANAAGGCCGGATTGGTCCNCTACTAGACTGCTTGCTATCTATGNGTAAGCGAAAGTTCAGAGATATCCCTGNTCATTTGTTTTAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||