These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13439#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 906 fasta sequence [TGGCAGGGAAGTCCGGAGTTGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG-GCGGACG-CGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCGACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC-GCCTCGCCGGCGACATGGAGT-GCCAACTCTCC-TGCGCCTTGGGCTCC-TGCCACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGC-TTCGGGCAGTGCTACGACGGCTGCAAGACCACGGCGGC-GGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGTGTTCTCTAGCCCCCATGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGATATCACTGCTCATTTGTTTTAAAAAACTTCTCTGCATTGACAACAAATTGTGTTCT] [+] EMBL AK069454 [TGGCAGGGAAGTCCGGAGTTGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGGCGCGGACGCCGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCGACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTCTCC TGCGCCTTGGGCTCC TGCCACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGC TTCGGGCAGTGCTACGACGGCTGCAAGACCACGGCGGC GGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGTGTTCTCTAGCCCCCATGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGATATCACTGCTCATTTGTTTTCTTCTCCTTCTCTGCATTGACAACAAATTGTGTTCT] [+] EMBL AU094982 [ CCGGAGTTGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG GCGGACGCCGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCGACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTCTCC TGCGCCTTGGGCTCC TGCCACCGCCTCCTTCCGGACGGCAAGGGCG ] [+] EMBL C73381 [ CCGGAGTTGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG NCGGACG CGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCAACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTNTCC TGCGCCTTGGGCTCC TGCNACCGNCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGCTTTCGGGCAGTGCTACGACGGCTNCAAGACCACGGCGGC GGCCAGACTNCCGAGGCCTNTCCGGGCC GNCACTACGT CTCTNTAGT CCCCTGATGACGTAGACCAT ATCCGG ] [+] EMBL AU182927 [ CCGGAGTTGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGGCGCGGACGCCGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCGACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTCTCC TGCGCCTTGGGCTCC TGCCACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGC TTCGGGCAGTGCTACGACGGCTGCAAGACCACGGCGGC GGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGA ] [+] EMBL C99084 [ TGGAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG GCGGACG CGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCGACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTCTCCTTGCG CTTTGGCTCCTTGCCACCG CTCCTTCCGGACGGCAAAGGCGCCGTGGAAGCTTCT TTCGGGCA TTNTANGACGG ] [+] EMBL C73311 [ GAAGCGATCGATGGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG GCGGACG NNACTGCNACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCAACAAGACGTGCCANCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCNTCGCCGGCGACATGGAGT GCCAACTNTCC TGCGCCTTGGGCTCC TGCNACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTNC TTCGGGCAGTGCTACGACGGTTG AAAACCACGGCGG ] [+] EMBL OSC4521 [ GGCGGCTACTACGACGGGACGAGTTGTTGCACTCGGCGCGGTGGCCGTGGTGGTGGCGCTGACATTCCTCGCCGGCGG NCGGACG CGACTGCTACGACTTCTGCTTCAAGGACTGCATGGCCAGGGAGAACAACATGGTCGACTACTGCAGCTACGCCTGCAACAAGACGTGCCAGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCCTCGCCGGCGACATGGAGT GCCAACTNTCC TGCGCCTTGGGCTCC TGCCACCGCCTTCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGCTTTCGGGCAGTGC ] [+] EMBL AU094247 [ AGCCGGACAAGCCCACGCTGTACTCGTCGTCGTCGTCGTCCC GCTTNGCCGGCGACATGAAGT GCCAACTNTCC TGCGCCTTGGGCTCC TGCCACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGGAGGCCTGC TTCGGGCAGTGCTACGACGGCTGCAAGACCACGGCGGC GGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGTGTTCTCTAGCCCCCATGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGAaaaaa ] [+] EMBL AU165805 [ CGTCGTCGTCCCGGCCTCGCCGGCGACATGAAGT G CAACTTTCC TGCGCCTTGGGCTCC TGCCACCGCCTCCTTCCGGACGGCAAGGGCGCCGTGAAGGCCTGC TTCGGGCAGTGCTACGACGGCTGCAAGACCACGGCGGC GGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGTGTTCTCTAGCCCCCATGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGATATCACTGCTCATTTGTTTTAAAAAAaaaaaaaa ] [+] EMBL BI795677 [ tTGGAGTCCCCAACTCTCC TGCGCCCTTGGCTCC T CCA CGCCTCCTTCCGGAC GCAAG GCCCTGGA GCCTGC TTC GGCAGTGCTACGACGGCTGCAAGACCACGGCGGC GGCCATGCT CCGA GCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGAGTTCTCTAGCCCCCCTGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTGTTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGAC AAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCTACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGAaaaaaaa ] [+] EMBL AU094300 [ TGCCACCGCTTCNTTCCGGACGGCAAGGGCNCCGTGAAGGCNTGT TTCGGGCAGTGTTACGACGGTTGCAAGACCACGGCGGCGGGCCAGACTGCCGAGGCCTCTCCGCGCCGGCCACTACGTGCTCTCTAGTCCCCCTGATGACGTAGACCATGATCCGGACCACCGCTACGTGTTCTCTAGCCCCCATGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGAGATATCACTGCTCATTTGTTTTAAAAAA ] [+] EMBL C99085 [ TGCTCTCTAGT CCCCTGATGACGTAGACCNTGATCCGGACCACCGCTACGTGTTCTCTAGCCCCC TGATGACGTAGACCATGATCCGGACCAAGTGTTCGCTAGTCCACCTGACGACATAGACCGCCATGTATTCGCTGCTCCTCCTGATGTTCTCGCTGCTCTTCCTGGTGAGCCGGACCACGCCTGACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCACTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAAGATAGCGTAGTAGCGTGTGAGTGACTGTATGCGTGCAGAAGGCCGGATTGGTCCACTACTAGACTGCTTGCTATCTATGTGTAAGCGAAAGTTCAGNGAaaaaaaaaa ] [+] EMBL AU182926 [ ACAAAACTGATCACACAACTTCGCTACCTGCTGCGAACGAATAATCTAGCGCTGCATGCAGCAGCAGCATGCACACATGTGCACACTAATTATATGTCATATGCNCTTCTATGTCGCAATATATGTATATGTTCTCCATGTAAANATAGCGTAGTAGCGTGTGAGTGNCTGTATGCGTGCANAAGGCCGGATTGGTCCNCTACTAGACTGCTTGCTATCTATGNGTAAGCGAAAGTTCAGAGATATCCCTGNTCATTTGTTTTAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||