cluster # 13443

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Oryza sativa
cluster # 13443 cluster # 13443 Sequences # 13 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13443#0 length = 2117 sequences # 12

consensus_13443#1 length = 365 sequences # 1

consensusID : consensus_13443#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2117
fasta sequence

                              [CTCCCCCCCCCCCCCCCCCCTGTGACTCTGAAGCTGCCTCTCATCTCCTCTCCAATCTCCATCCACATCGCATCCATCATAAATCCCCCACACCCTTCTCCCCAACCAAGCACCTACCACCATTCCCAATCCCCCTCTTCCAATCGCCATATGCAAGAGCCCCAAATCCGCTATTGCATTTGTTTCATTTCATCGGCTGCCGCTCCTGAGAAACAGCAATCTGGATAGGATAGGTGGTCGCCTGTATTTAGATCCGGACTTTTGCTAGTGGGGGGAGAGAGGATTTAGGTGAACGAGCATCTTGATTTTGACCAATCTTTGCCTGTCTCACTGATTGACCCTCCTCCTGTGTGCTTGGTTCTTTAAATCCCGCGTGGTGGGTGTGGGGAAGAGGAGAGGAGGGAGGCAAAGGCACGAGCAAGAACAGCTGCTTCCGTCTTCTTGCTCGCTGGTATTCAAAAGGAACTATCAAGGTGTTGAGTGGAGATATTGGGG-GCAAAGTTTGGATTTTGGAGGTTATTGTTTGCTTTCCATTGGCTAAAAATGTTGAGGCAGAGCTCTAGTAGGAATCACAGGTCCAAAGGTCTGAAGCTGAAGAAGGCTCTTCAGATAACCCTCTTGGTTCTGGTTTCTGTTTGGTTGATATACCAAGTCAAGCATTCATACGAGAAGAAGGCATATCATGAAAATGAGCCCAATGACCTGCATAAAGATGATGATCAAAACCAGGGTGAGATCAGATTAGGCAGGAA-GGACCTGCCTACT-AAGC-TGGAGGCTGACTCATCAA-CGC-TGGATG-AA-CGGATTGAGGATGAAGAGAATGAAGAGATGGAGCAAGAAATGAAGCACGATGAGAATGATGAAGACCCCATTGATGAACCTGACCTGGACAAAGATGATGATCTTCCTGAGCCTGGCGAGCACTCTGCTGATAAGGATGAAAGATCTGAGGATGTGGGTGTGTTTGAGGATGAAGAGCGGAAGGAGCGGTCTCAGGAGGATCAAGAGAAGACCTTTCATGGGGATAATGTATCAAGTGCTGTCAGTCATGACCCTCCGTCAGCAGAGCAAGATGAGCTGCTTCGTCATGCCCAAGACAAAATATTATATGTGGATGATGCTTCGACAGCAGTGCCTCATGACAACCAGGAAGCTGAACGCAGGGAGGAGGAAGCTCGCAAAGCTAGGGAGATGACTTTCAGAGGCGATGATGTGTCAAGTTCCGTAGATCATGATGCCCAAGTGACAAAACCTCTCCCAGAGGAGCAATTGAAGAGCATGGATAGCATATTTGAAGGCACCACAAATTTATCAAACGGAATAACATTTCGAGGCCCAGGAGTGAATGAATCAACTGCTGCTAGGGAGCTTGGGGCTATTCCAGCTGATGCATCTTCCCATCCAAACACTAGCACTGTTTCAGAAAGCAATACTGATACAGCTCCGGTAAATTTGGATGGCAACCATACTGGATCAGATCAAGCTAATTCGACCTCTTTGAAAGGTCAACAAGAGCAGCAAGCAAATTCAACGGATGTGTTGAACAACCAGATAAAACTCTTCATTGACCTCACATCAGCTGCTGAGTTGAATTATCGACCAAATGGGACCCTGGCTTCGGCTTCAACTGATGCTGAAAATGCCACTTCTGTAGATAGAGGCCATGATGGTAATACCGGAACCAATAAGGCTGAGGAAGGAGATACAGGCAAAGACTTAGATTTATCGACAAAAATCATGAACAAGGCCATTAGTGAAGATGAAGTTGTTCTTGAATGATAAGGAGATCTCTCAGGTTAGCTTCTGGTGTAACCTGTAAGTCTGTA-GGACCTTAAGAGAAGG--AGA-AGAAACT-AGT-CTT--CTCTTT--CT-CAGTA-GA-CTT--GGAGATGCAATACAAGTAAACTATCTCTATTGCCCCCCCCCCCCCTTTTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTCTGGGTTGAGTGATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGCAGCTCTGAAGCTTTGCTGCTGCAATGATATTTCAACTTGTCTATAGTTCTGTGCTTTATGTCTACAACTTTTTTCTTGTGAAAANGGAAA]

[+] EMBL AK068759             [CTCCCCCCCCCCCCCCCCCCTGTGACTCTGAAGCTGCCTCTCATCTCCTCTCCAATCTCCATCCACATCGCATCCATCATAAATCCCCCACACCCTTCTCCCCAACCAAGCACCTACCACCATTCCCAATCCCCCTCTTCCAATCGCCATATGCAAGAGCCCCAAATCCGCTATTGCATTTGTTTCATTTCATCGGCTGCCGCTCCTGAGAAACAGCAATCTGGATAGGATAGGTGGTCGCCTGTATTTAGATCCGGACTTTTGCTAGTGGGGGGAGAGAGGATTTAGGTGAACGAGCATCTTGATTTTGACCAATCTTTGCCTGTCTCACTGATTGACCCTCCTCCTGTGTGCTTGGTTCTTTAAATCCCGCGTGGTGGGTGTGGGGAAGAGGAGAGGAGGGAGGCAAAGGCACGAGCAAGAACAGCTGCTTCCGTCTTCTTGCTCGCTGGTATTCAAAAGGAACTATCAAGGTGTTGAGTGGAGATATTGGGG GCAAAGTTTGGATTTTGGAGGTTATTGTTTGCTTTCCATTGGCTAAAAATGTTGAGGCAGAGCTCTAGTAGGAATCACAGGTCCAAAGGTCTGAAGCTGAAGAAGGCTCTTCAGATAACCCTCTTGGTTCTGGTTTCTGTTTGGTTGATATACCAAGTCAAGCATTCATACGAGAAGAAGGCATATCATGAAAATGAGCCCAATGACCTGCATAAAGATGATGATCAAAACCAGGGTGAGATCAGATTAGGCAGGAA GGACCTGCCTACT AAGC TGGAGGCTGACTCATCAA CGC TGGATG AA CGGATTGAGGATGAAGAGAATGAAGAGATGGAGCAAGAAATGAAGCACGATGAGAATGATGAAGACCCCATTGATGAACCTGACCTGGACAAAGATGATGATCTTCCTGAGCCTGGCGAGCACTCTGCTGATAAGGATGAAAGATCTGAGGATGTGGGTGTGTTTGAGGATGAAGAGCGGAAGGAGCGGTCTCAGGAGGATCAAGAGAAGACCTTTCATGGGGATAATGTATCAAGTGCTGTCAGTCATGACCCTCCGTCAGCAGAGCAAGATGAGCTGCTTCGTCATGCCCAAGACAAAATATTATATGTGGATGATGCTTCGACAGCAGTGCCTCATGACAACCAGGAAGCTGAACGCAGGGAGGAGGAAGCTCGCAAAGCTAGGGAGATGACTTTCAGAGGCGATGATGTGTCAAGTTCCGTAGATCATGATGCCCAAGTGACAAAACCTCTCCCAGAGGAGCAATTGAAGAGCATGGATAGCATATTTGAAGGCACCACAAATTTATCAAACGGAATAACATTTCGAGGCCCAGGAGTGAATGAATCAACTGCTGCTAGGGAGCTTGGGGCTATTCCAGCTGATGCATCTTCCCATCCAAACACTAGCACTGTTTCAGAAAGCAATACTGATACAGCTCCGGTAAATTTGGATGGCAACCATACTGGATCAGATCAAGCTAATTCGACCTCTTTGAAAGGTCAACAAGAGCAGCAAGCAAATTCAACGGATGTGTTGAACAACCAGATAAAACTCTTCATTGACCTCACATCAGCTGCTGAGTTGAATTATCGACCAAATGGGACCCTGGCTTCGGCTTCAACTGATGCTGAAAATGCCACTTCTGTAGATAGAGGCCATGATGGTAATACCGGAACCAATAAGGCTGAGGAAGGAGATACAGGCAAAGACTTAGATTTATCGACAAAAATCATGAACAAGGCCATTAGTGAAGATGAAGTTGTTCTTGAATGATAAGGAGATCTCTCAGGTTAGCTTCTGGTGTAACCTGTAAGTCTGTA GGACCTTAAGAGAAGG  AGA AGAAACT AGT CTT  CTCTTT  CT CAGTA GA CTT  GGAGATGCAATACAAGTAAACTATCTCTATTGCCCCCCCCCCCCCTTTTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTCTGGGTTGAGTGATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGCAGCTCTGAAGCTTTGC                                                                          ]
[+] EMBL CB655861             [                              AAGCTGCCTCTCATCTCCTCTCCAATCTCCATCCACATCGCATCCATCATAAATCCCCCACACCCTTCTCCCCAACCAAGCACCTACCACCATTCCCAATCCCCCTCTTCCAATCGCCATATGCAAGAGCCCCAAATCCGCTATTGCATTTGTTTCATTTCATCGGCTGCCGCTCCTGAGAAACAGCAATCTGGATAGGATAGGTGGTCGCCTGTATTTAGATCCGGACTTTTGCTAGTGGGGGGAGAGAGGATTTAGGTGAACGAGCATCTTGATTTTGACCAATCTTTGCCTGTCTCACTGATTGACCCTCCTCCTGTGTGCTTGGTTCTTTAAATCCCGCGTGGTGGGTGTGGGGAAGAGGAGAGGAGGGAGGCAAAGGCACGAGCAAGAACAGCTGCTTCCGTCTTCTTGCTCGCTGGTATTCAAAAGGAACTATCAAGGTGTTGAGTGGAGATATTGGGG GCAAAGTTTGGATTTTGGAGGTTATTGTTTGCTTTCCATTGGCTAAAAATGTTGAGGCAGAGCTCTAGTAGGAATCACAGGTCCAAAGGTCTGAAGCTGAAGAAGGCTCTTCAGATAACCCTCTTGGTTCTGGTTTCTGTTTGGTTGATATACCAAGTCAAGCATTCATACGAGAAGAAGGCATATCATGAAAATGAGCCCAATGACCTGCATAAAGATGATGATCAAAACCAGGGTGAGATCAGATTAGGCAGGAA GGACCTGCCTACT AAGC TGGAGGCTGACTCATCAA CGC TGGATGAAA CGGA TGAGGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB637799             [                                                                                                               ACCTACCACCATTCCCAATCCCCCTCTTCCAATCGCCATATGCAAGAGCCCCAAATCCGCTATTGCATTTGTTTCATTTCATCGGCTGCCGCTCCTGAGAAACAGCAATCTGGATAGGATAGGTGGTCGCCTGTATTTAGATCCGGACTTTTGCTAGTGGGGGGAGAGAGGATTTAAGTGAACGAGCATCTTGATTTTGACCAATCTTTGCCTGTCTCACTGATTGACCCTCCTCCTGTGTGCTTGGTTCTTTAAATCCCGCGTGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C26367               [                                                                                                                                                                                                                                                                                                                                                                                                                                         AGCTGCTTCCGTCTTCTTNCTCGCTGGTATTCAAAAGGAACTATCAAGGTGTTGAGTGGAGATATTGGGG GCAAAGTTTGGATTTTGGAGGTTATTGTTTGCTTTCCATTGGCTAAAAATGTTGAGGCAGAGCTCTAGTAGGAATCACAGGTCCAAAGGTCTGAAGCTGAAGAAGGCTCTTCAGATAACCCTCTTGGTTCTGGTTTCTNTTTGGTTGATATACCAAGTCAAGCATTCATACGAGAAGAAGGCATATCATGAAAATGAGCCCAATGACCTGCATAAAGNTGATGATCAAAACCAGGGTGAGATCAGATTAGGCAGGAAGGGACCNNCCTACTAAAGCTTGGAGGCTGACTCATCAACCGCTTGGATG AACCGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB623294             [                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCTTCCGTCTTCTTGCTTGCTGGTATTCAAAAGGAACTATCAAGGTGTTGAGTGGAGATATTGGGGTGCAAAGTTTGGATTTTGGAGGTTATTGTTTGCTTTCCATTGGCTAAAAATGTTGAGGCAGAGCTCTAGTAGGAATCACAGGTCTAAAGGTCTGAAGCTGAAGAAGGCTCTTCAGATAACCCTCTTGGTTCTGGTTTCTGTTTGGTTGATATACCAAGTCAAGCATTCATACGAGAAGAAGGCATATCATGAAAATGAGCCCAATGACCTGCATAAAGATGATGATCAAAACCAGGGTGAGATCAGATTAGGCAGGAA GGACCTGCCTACT AAGC TGGAGGCTGACTCATCAA CGC TGGATG AA CGGATTGAGGATGAAGAGAATGAAGAGATGGAGCAAGAAATGAAGCACGATGAGAATGATGAAGACCCCATTGATGAACCTGACCTGGACAAAGATGATGATCTTCCTGAGCCTGGCGAGCACTCTGCTGATAAGGATGAAAGATCTGAGGATGTGGGTGTGTTTGAGGATGAAGAGCGGAAGGAGCGGTCTCAGGAGGATCAAGAGAAGACCTTTCATGGGGATAATGTATCAAGTGCTGTCAGTCATGACCCTCCGTCAGCAGAGCAAGATGAGCTGCTTCGTCGTGCCCAAGACAAAATATTATATGTGGATGATGCTTCGACAGCAGTGCCTCATGACAACCAGGAAGCTGAACGCAGGGAGGAGGAAGCTCGCAAGGCTANGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB648302             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGTTTCTGTTTGGTTGATATACCAAGTCAAGCATTCATACGAGAAGAAGGCATATCATGAAAATGAGCCCAATGACCTGCATAAAGATGATGATCAAAACCAGGGTGAGATCAGATTAGGCAGGAA GGACCTGCCTACT AAGC TGGAGGCTGACTCATCAA CGC TGGATG AA CGGATTGAGGATGAAGAGAATGAAGAGATGGAGCAAGAAATGAAGCACGATGAGAATGATGAAGACCCCATTGATGAACCTGACCTGGACAAAGATGATGATCTTCCTGAGCCTGGCGAGCACTCTGCTGATAAGGATGAAAGATCTGAGGATGTGGGTGTGTTTGAGGATGAAGAGCGGAAGGAGCGGTCTCAGGAGGATCAAGAGAAGACCTTTCATGGGGATAATGTATCAAGTGCTGTCAGTCATGACCCTCCGTCAGCAGAGCAAGATGAGCTGCTTCGTCATGCCCAAGACAAAATATTATATGTGGATGATGCTTCGACAGCAGTGCCTCATGACAACCAGGAAGCTGAACGCAGGGAGGAGGAAGCTCGCAAAGCTAGGGAGATGACTTTCAGAGGCGATGATGTGTCAAGTTCCGTAGATCATGATGCCCAAGTGACAAAACCTCTCCCAGAGGAGCAATTGAAGAGCATGGATAGCATATTTGAAGGCACCACAAATTTATCAAACGGAATAACATTTCGAGGCCCAGGAGTGAATGAATCAACTGCTGCTAGGGAGCTTGGGGCTATTCCAGCTGATGCATCTTCCCATCCAAACACTAGCACTGTTTCAGAAAGCAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA753696             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ggctcgaggGAGGAGCAATTGAAGAGCATGGATAGCATATTTGAAGGCACCACAAATTTATCAAACGGAATAACATTTCGAGGCCCAGGAGTGAATGAATCAACTGCTGCTAGGGAGCTTGGGGCTATTCCAGCTGATGCATCTTCCCATCCAAACACTAGCACTGTTTCAGAAAGCAATACTGATACAGCTCCGGTAAATTTGGATGGCAACCATACTGGATCAGATCAAGCTAATTCGACCTCTTTGAAAGGTCAACACGAGCAGCAAGCAAATTCAACGGCTGTGTAGAACAACCAGATAAAACTCTTCATTGACCTCACATCAGCTGCTGAGTTGAATCATCCACCAAATGGGACCCTGGCTTCGGCTTCAACTGATGCTGAAAATGCCACTTCTGTAGATAGAGGCCATGATGGTAATACCGGAACCAATAAGGCTGAGGAAGGAGATACAGGCAAAGACTTAGATTTATCGACCATAATCATGAACAAGGCCATTATTGAAGATGAAGTTGTTCTTGAATGATAAGGAGATCTCTCAGGGTAGCCTCTGGTGTACCCTGTAAGTCTGTA GGACCctt                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB648303             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AACACTAGCACTGTTTCAGAAAGCAATACTGATACAGCTCCGGTAAATTTGGATGGCAACCATTCTGGATCAGATCAAGGTAATTTGACCTTTTTGAAAGGTCAACAAGAGCAGCAAGCAAATTCAACGGATGTGTTGAACAACCAGATAAAACTTTTCATTGACCTCACATCAGGTGGTGAGTTGAATTATTGACCAAATGGGACCCTGGGTTTGGGTTCAAATGATGGTGAAAATGCCACTTTTGTAGATAGAGGCCATGATGGTAATACCGGAACCAATAAGGGTGAGGAAGGAGATTCAGGCAAAGACTTAGATTTATTGACAAAAATCATGAACAAGGCCATTAGTGAAGATGAAGTTGTTTTTGAATGATAAGGAGATTTTTCAGGTTAGGTTTTGGGGTAACCTGTAAGTTTGTA GGGCCTTAAGAGAAGG  AGA AGAAACT AGT TTT  TTTTTT  TT CAGTA GA CTT  GGAGATGCAATACAAGTAAACTATTTTTATTGCCCCCCCCCCCCCTTTTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTCTGGGTTGAGTGATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGC                                                                                          ]
[-] EMBL CB655862             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGATGGCAACCATTCTGGATCAGATCAAGGTAATTCGACCTCTTTGAAAGGTCAACAAGAGCAGCAAGCAAATTCAACGGATGTGTTGAACAACCAGATAAAACTTTTCATTGACCTCACATCAGCTGGTGAGTTGAATTATTGACCAAATGGGGCCCTGGGTTTGGCTTCAACTGATGCTGAAAATGCCCCTTTTGTAGATAGAGGCCATGATGGTAATACCGGAACCAATAAGGCTGAGGAAGGAGATTCAGGCAAAGACTTAGATTTTTTGGCAAAAATCATGAACAAGGCCCTTAGTGAAGATGAAGTTGTTTTTGAATGATAAGGAGATCTTTCAGGTTAGCTTTTGGGGTAACCCGTAAGTTTGTA GGGCCTTAAGAGAAGG  GGA AGAAACT AGT TTT  TTTTTT  TT CAGTA GG CTT  GGGGATGCAATACAAGTAAACTATTTTTATTGCCCCCCCCCCCCCTTTTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTCTGGGTTGAGTGATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGCAGCTCTGAAGCTTTGCTGCTGCAATGATATTTC                                                         ]
[+] EMBL OSS11669A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CATTGACCTCACATCAGCTGCTGAGTTGAATTATCGACCAAATGGGACCCTGGCTTCGGCTTCAACTGATGCTGAAAATGCCACTTCTGTAGATAGAGGCCATGATGGTAATACCGGAACCAATAAGGCTGAGGAAGGAGATACAGGCAAAGACTTAGATTTATCGACANAAATCATGAACAAGGCCATTAGTGAAGATGAAGTTGTTCTTGAATGATAAGGAGATCTCTCAGGTTAGCTTCTGGTGTAACCTGTAAGTCTGTAGGGACCTTAAGAGGAGGGNGGANGGAAACTAAGTACTTNCCTCTTTTCCTCCAGTAGGANCTTTNGGAGganttg                                                                                                                                                                                                                                          ]
[+] EMBL AU197888             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CATTGACCTCACATCAGCTGCTGAGTTGAATTATCGACCAAATGGGACCCTGGCTTCGGCTTCAACTGATGCTGAAAATGCCACTTCTGTAGATAGAGGCCATGATGGTAATACCGGAACCAATAAGGCTGAGGAAGGAGATACAGGCAAAGACTTAGATTTATCGACAAAAATCATGAACAAGGCCATTAGTGAAGATGAAGTTGTTCTTGAATGATAAGGAGATCTCTCAGGTTAGCTTCTGGTGTAACCTGTAAGTCTGTA GGACCTTAAGAGAAGG  AGA AGAAACT AGT CTT  CTCTTT  CT CAGTA GA CTT  GGAGATGCAATACAAGTAAACTATCTCTATTGCCCCCCCCCCCCCTTTTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTCTGGGTTGAGTGATGCGCAAAAGGGCTTGTTA                                                                                                                   ]
[+] EMBL AU093411             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGT CTT  CTCTTT  CT CAGTA GN CTT  GGAGATGCAATACAAGTAAACTATCNCTATTGCCCCCCCCCCCCCTTTTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTCTGGGTTGAGTGATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGCAGCTCTGAAGCTTTGCTGCTGCAATGATATTTCAACTTGTCTATAGTTCTGTGCTTTATGTCTACAACTTTTTTCTTGTGAAAANGGAAA]




>consensus_13443#0
CTCCCCCCCCCCCCCCCCCCTGTGACTCTGAAGCTGCCTCTCATCTCCTCTCCAATCTCC
ATCCACATCGCATCCATCATAAATCCCCCACACCCTTCTCCCCAACCAAGCACCTACCAC
CATTCCCAATCCCCCTCTTCCAATCGCCATATGCAAGAGCCCCAAATCCGCTATTGCATT
TGTTTCATTTCATCGGCTGCCGCTCCTGAGAAACAGCAATCTGGATAGGATAGGTGGTCG
CCTGTATTTAGATCCGGACTTTTGCTAGTGGGGGGAGAGAGGATTTAGGTGAACGAGCAT
CTTGATTTTGACCAATCTTTGCCTGTCTCACTGATTGACCCTCCTCCTGTGTGCTTGGTT
CTTTAAATCCCGCGTGGTGGGTGTGGGGAAGAGGAGAGGAGGGAGGCAAAGGCACGAGCA
AGAACAGCTGCTTCCGTCTTCTTGCTCGCTGGTATTCAAAAGGAACTATCAAGGTGTTGA
GTGGAGATATTGGGGGCAAAGTTTGGATTTTGGAGGTTATTGTTTGCTTTCCATTGGCTA
AAAATGTTGAGGCAGAGCTCTAGTAGGAATCACAGGTCCAAAGGTCTGAAGCTGAAGAAG
GCTCTTCAGATAACCCTCTTGGTTCTGGTTTCTGTTTGGTTGATATACCAAGTCAAGCAT
TCATACGAGAAGAAGGCATATCATGAAAATGAGCCCAATGACCTGCATAAAGATGATGAT
CAAAACCAGGGTGAGATCAGATTAGGCAGGAAGGACCTGCCTACTAAGCTGGAGGCTGAC
TCATCAACGCTGGATGAACGGATTGAGGATGAAGAGAATGAAGAGATGGAGCAAGAAATG
AAGCACGATGAGAATGATGAAGACCCCATTGATGAACCTGACCTGGACAAAGATGATGAT
CTTCCTGAGCCTGGCGAGCACTCTGCTGATAAGGATGAAAGATCTGAGGATGTGGGTGTG
TTTGAGGATGAAGAGCGGAAGGAGCGGTCTCAGGAGGATCAAGAGAAGACCTTTCATGGG
GATAATGTATCAAGTGCTGTCAGTCATGACCCTCCGTCAGCAGAGCAAGATGAGCTGCTT
CGTCATGCCCAAGACAAAATATTATATGTGGATGATGCTTCGACAGCAGTGCCTCATGAC
AACCAGGAAGCTGAACGCAGGGAGGAGGAAGCTCGCAAAGCTAGGGAGATGACTTTCAGA
GGCGATGATGTGTCAAGTTCCGTAGATCATGATGCCCAAGTGACAAAACCTCTCCCAGAG
GAGCAATTGAAGAGCATGGATAGCATATTTGAAGGCACCACAAATTTATCAAACGGAATA
ACATTTCGAGGCCCAGGAGTGAATGAATCAACTGCTGCTAGGGAGCTTGGGGCTATTCCA
GCTGATGCATCTTCCCATCCAAACACTAGCACTGTTTCAGAAAGCAATACTGATACAGCT
CCGGTAAATTTGGATGGCAACCATACTGGATCAGATCAAGCTAATTCGACCTCTTTGAAA
GGTCAACAAGAGCAGCAAGCAAATTCAACGGATGTGTTGAACAACCAGATAAAACTCTTC
ATTGACCTCACATCAGCTGCTGAGTTGAATTATCGACCAAATGGGACCCTGGCTTCGGCT
TCAACTGATGCTGAAAATGCCACTTCTGTAGATAGAGGCCATGATGGTAATACCGGAACC
AATAAGGCTGAGGAAGGAGATACAGGCAAAGACTTAGATTTATCGACAAAAATCATGAAC
AAGGCCATTAGTGAAGATGAAGTTGTTCTTGAATGATAAGGAGATCTCTCAGGTTAGCTT
CTGGTGTAACCTGTAAGTCTGTAGGACCTTAAGAGAAGGAGAAGAAACTAGTCTTCTCTT
TCTCAGTAGACTTGGAGATGCAATACAAGTAAACTATCTCTATTGCCCCCCCCCCCCCTT
TTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTCTGGGTTGAG
TGATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGCAGCTCTGAAGCTT
TGCTGCTGCAATGATATTTCAACTTGTCTATAGTTCTGTGCTTTATGTCTACAACTTTTT
TCTTGTGAAAANGGAAA

consensusID : consensus_13443#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 365
fasta sequence

                              [ATAAGGGTGAGGAAGGAGATACAGGCAAAGATTTTGATTTTTTGGCAAAAATTATGAACAAGGCCATTAGTGAAGATGAAGTTGTTTTTGAATTATAAGGAGATTTTTCAGGTTAGGTTTTGGTGTAACCTGTAAGTTTGTAGGCCCTTTAGAGAAGGGGAAGGAAATAGTTTTTTTTTTTTCAGTAGACTTGGAGATGCCAAACAAGTTAACTATTTTTATTGCCCCCCCCCCCCCTTTTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTTTGGGTTGAGTGATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGCAGCTTTGAAGCTTTGCTGC]

[-] EMBL CB637800             [ATAAGGGTGAGGAAGGAGATACAGGCAAAGATTTTGATTTTTTGGCAAAAATTATGAACAAGGCCATTAGTGAAGATGAAGTTGTTTTTGAATTATAAGGAGATTTTTCAGGTTAGGTTTTGGTGTAACCTGTAAGTTTGTAGGCCCTTTAGAGAAGGGGAAGGAAATAGTTTTTTTTTTTTCAGTAGACTTGGAGATGCCAAACAAGTTAACTATTTTTATTGCCCCCCCCCCCCCTTTTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTTTGGGTTGAGTGATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGCAGCTTTGAAGCTTTGCTGC]




>consensus_13443#1
ATAAGGGTGAGGAAGGAGATACAGGCAAAGATTTTGATTTTTTGGCAAAAATTATGAACA
AGGCCATTAGTGAAGATGAAGTTGTTTTTGAATTATAAGGAGATTTTTCAGGTTAGGTTT
TGGTGTAACCTGTAAGTTTGTAGGCCCTTTAGAGAAGGGGAAGGAAATAGTTTTTTTTTT
TTCAGTAGACTTGGAGATGCCAAACAAGTTAACTATTTTTATTGCCCCCCCCCCCCCTTT
TGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTTTGGGTTGAGT
GATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGCAGCTTTGAAGCTTT
GCTGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13443#0      CTCCCCCCCCCCCCCCCCCCTGTGACTCTGAAGCTGCCTCTCATCTCCTCTCCAATCTCC 60
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      ATCCACATCGCATCCATCATAAATCCCCCACACCCTTCTCCCCAACCAAGCACCTACCAC 120
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      CATTCCCAATCCCCCTCTTCCAATCGCCATATGCAAGAGCCCCAAATCCGCTATTGCATT 180
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      TGTTTCATTTCATCGGCTGCCGCTCCTGAGAAACAGCAATCTGGATAGGATAGGTGGTCG 240
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      CCTGTATTTAGATCCGGACTTTTGCTAGTGGGGGGAGAGAGGATTTAGGTGAACGAGCAT 300
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      CTTGATTTTGACCAATCTTTGCCTGTCTCACTGATTGACCCTCCTCCTGTGTGCTTGGTT 360
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      CTTTAAATCCCGCGTGGTGGGTGTGGGGAAGAGGAGAGGAGGGAGGCAAAGGCACGAGCA 420
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      AGAACAGCTGCTTCCGTCTTCTTGCTCGCTGGTATTCAAAAGGAACTATCAAGGTGTTGA 480
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      GTGGAGATATTGGGGGCAAAGTTTGGATTTTGGAGGTTATTGTTTGCTTTCCATTGGCTA 540
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      AAAATGTTGAGGCAGAGCTCTAGTAGGAATCACAGGTCCAAAGGTCTGAAGCTGAAGAAG 600
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      GCTCTTCAGATAACCCTCTTGGTTCTGGTTTCTGTTTGGTTGATATACCAAGTCAAGCAT 660
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      TCATACGAGAAGAAGGCATATCATGAAAATGAGCCCAATGACCTGCATAAAGATGATGAT 720
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      CAAAACCAGGGTGAGATCAGATTAGGCAGGAAGGACCTGCCTACTAAGCTGGAGGCTGAC 780
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      TCATCAACGCTGGATGAACGGATTGAGGATGAAGAGAATGAAGAGATGGAGCAAGAAATG 840
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      AAGCACGATGAGAATGATGAAGACCCCATTGATGAACCTGACCTGGACAAAGATGATGAT 900
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      CTTCCTGAGCCTGGCGAGCACTCTGCTGATAAGGATGAAAGATCTGAGGATGTGGGTGTG 960
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      TTTGAGGATGAAGAGCGGAAGGAGCGGTCTCAGGAGGATCAAGAGAAGACCTTTCATGGG 1020
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      GATAATGTATCAAGTGCTGTCAGTCATGACCCTCCGTCAGCAGAGCAAGATGAGCTGCTT 1080
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      CGTCATGCCCAAGACAAAATATTATATGTGGATGATGCTTCGACAGCAGTGCCTCATGAC 1140
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      AACCAGGAAGCTGAACGCAGGGAGGAGGAAGCTCGCAAAGCTAGGGAGATGACTTTCAGA 1200
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      GGCGATGATGTGTCAAGTTCCGTAGATCATGATGCCCAAGTGACAAAACCTCTCCCAGAG 1260
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      GAGCAATTGAAGAGCATGGATAGCATATTTGAAGGCACCACAAATTTATCAAACGGAATA 1320
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      ACATTTCGAGGCCCAGGAGTGAATGAATCAACTGCTGCTAGGGAGCTTGGGGCTATTCCA 1380
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      GCTGATGCATCTTCCCATCCAAACACTAGCACTGTTTCAGAAAGCAATACTGATACAGCT 1440
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      CCGGTAAATTTGGATGGCAACCATACTGGATCAGATCAAGCTAATTCGACCTCTTTGAAA 1500
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      GGTCAACAAGAGCAGCAAGCAAATTCAACGGATGTGTTGAACAACCAGATAAAACTCTTC 1560
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      ATTGACCTCACATCAGCTGCTGAGTTGAATTATCGACCAAATGGGACCCTGGCTTCGGCT 1620
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      TCAACTGATGCTGAAAATGCCACTTCTGTAGATAGAGGCCATGATGGTAATACCGGAACC 1680
consensus_13443#1      ------------------------------------------------------------
                                                                                   

consensus_13443#0      AATAAGGCTGAGGAAGGAGATACAGGCAAAGACTTAGATTTATCGACAAAAATCATGAAC 1740
consensus_13443#1      -ATAAGGGTGAGGAAGGAGATACAGGCAAAGATTTTGATTTTTTGGCAAAAATTATGAAC 59
                        ****** ************************ ** ***** * * ******* ******

consensus_13443#0      AAGGCCATTAGTGAAGATGAAGTTGTTCTTGAATGATAAGGAGATCTCTCAGGTTAGCTT 1800
consensus_13443#1      AAGGCCATTAGTGAAGATGAAGTTGTTTTTGAATTATAAGGAGATTTTTCAGGTTAGGTT 119
                       *************************** ****** ********** * ********* **

consensus_13443#0      CTGGTGTAACCTGTAAGTCTGTAGGACCTTAAGAGAAGGAGAAGAAACTAGTCTTCTCTT 1860
consensus_13443#1      TTGGTGTAACCTGTAAGTTTGTAGGCCCTTTAGAGAAGGGGAAGGAAATAGTTTTTTTTT 179
                        ***************** ****** **** ******** **** ** **** ** * **

consensus_13443#0      TCTCAGTAGACTTGGAGATGCAATACAAGTAAACTATCTCTATTGCCCCCCCCCCCCCTT 1920
consensus_13443#1      TTTCAGTAGACTTGGAGATGCCAAACAAGTTAACTATTTTTATTGCCCCCCCCCCCCCTT 239
                       * ******************* * ****** ****** * ********************

consensus_13443#0      TTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTCTGGGTTGAG 1980
consensus_13443#1      TTGTATAAATTTGATAGAGATATGCTATGTATTGCCTAGCACATCATGCTTTGGGTTGAG 299
                       ************************************************** *********

consensus_13443#0      TGATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGCAGCTCTGAAGCTT 2040
consensus_13443#1      TGATGCGCAAAAGGGCTTGTTATGGAAGTAATATATAGCCATTCAGCAGCTTTGAAGCTT 359
                       *************************************************** ********

consensus_13443#0      TGCTGCTGCAATGATATTTCAACTTGTCTATAGTTCTGTGCTTTATGTCTACAACTTTTT 2100
consensus_13443#1      TGCTGC------------------------------------------------------ 365
                       ******                                                      

consensus_13443#0      TCTTGTGAAAANGGAAA 2117
consensus_13443#1      -----------------