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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13446#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2312 fasta sequence
[GGTTGTGAAGGAGAATGAGGTGTTCAATGAATGTAACTGGAAGGGCAAAGACAATGCACTTGGTGATATGATGAGCTGGCTCGAGTGGATCCTGTCGCAGACACTTCTACGGATAGCGGAGTCCAACCCGCAAGGAATGGATGACTTCTGGCTGCAGCAGGGCGCAGATATGCTGCTGAGTTTGGTGAAGAGCTCTCAGGAGGATGTACAGGAGCGTGCAGCTACCACACTTGCTACGTTTGTGGTTATTGATGACGAGAGCGCGAATGTGGATGCTGCAAGATCAGAGGCAGTGATGCGTGTTGGGGGCATTCCAATGCTACTGGACCTTGCAAGGTGTTCAAGGGAGAGTGCACAGTCAGAAGCAGCAAAGGCTATTGCCAACTTATCGGTGAATGCCAAGGTTGCAAAGGCAGTTGCAGACGAGGGAGGTATCACAATACTAACCAATTTGGCCAGGTCAATGAATCGGCTTGTTGCTGAAGAAGCTGCTGGTGGCCTTTGGAATCTCTCCGTGGGTGAGGAGCACAAGGCAGCCATTGCAGCAGCTGGTGGTATAAAGGCTTTGGTCGATCTCATACTCCGCTGGCCTGCTGGGACTGATGGAGTTCTTGAACGTGCTGCTGGGGCACTTGCAAACCTAGCTGCTGATGACAAGTGTAGCATGGAAGTTGCAAAGGCTGGTGGTGTCCATGCTTTGGTCATGCTTGCTCGATCATGTAAACTTGAGGGTGTCCTAGAACAGGCTGCAAGGGCATTAGCTAACTTAGCCGCACATGGAGATAACAACAATAATAATGCCGCTGTGGGTCAGGAAGCAGGGGCTCTTGAGGCATTAGTGCAGCTAACAAGCTCTCAAAATGAGGGTGTAAGACAAGAAGCTGCTGGTGCTCTGTGGAATCTGTCATTTGATGATAGAAACCGTGAAGGCATTGCTGCTGCGGGTGGCGTTGAAGCTTTGGTTTCACTTGCACAAGAATGTTTGAATGCTTCGGAAGGCCTTCAGGAGAGAGCTGCTGGCGCATTATGGGGACTATCTGTTTCAGAAGCTAACAGTATGGCAATTGGACAGGAGGGTGGTGTCGCACCTTTGCTCACACTGGCACAATCAGATGTTGAAGATGTTCACGAGACAGCTGCAGGGGCACTATGGAATCTTGCTTTCTATTCTGGTAATGCTCTCTGTATTGTTGAAGAAGGTGGGGTTCCTATTCTAGTGCGGCTTTGCTCATCATCAGGGTCAAAAATGGCACGTTTCATGTCTGCGCTAGCCCTTGCTTATATGTTCGATGGAAGAATGGATGAGGTTGCATTGGTTGGGACGTCATCAGAGGGCAGTTCCAAGAGTGTTAATGTTGAGGGAGCTAGGAGAATGGCTTTGAAGCATATACAGACTTTTGTTCTGACATTTTCGGACCCACAAGTTTTCACTACGGCTTCCACCTCCTCAGCCTCAGCAGCACTATCTCAGATTGCTGATGCAGTGTTTATACAAGAAGCTGGACACCTGAGATGCAGTGGTGCCGAGATCGCTAGATTTGTTGCCATGCTCCGGAATCCTGCATCAATTCTTCGCGCTTGTGCTGCCTTTGCCCTTCTTCAGTTCACAATCCCTGGAGGTCGGCACGCAGTGCACCATGCGGGTCTCCTGCAGAAAGCAGGGGCAGCTCGAGTCTTGCGCGCAGCAGCAGCAGCCACGACCGCTTCTATCGAAG-CCAAAGTCTTTGCAAGAATTGTCCTCAGAAATTTGGAACACCATCAGACAGGGACTTCAACATGAAAGCACAGCAGTGGAGCTTATGCTAATCTTCCAACAAGGCATTTCTTCAGCAGCCTTCTCAGCCTGTTCAAAACATCGCAAAATTGCG-GCC-CA-AG-GTAATGTTT-TGGCTTTCAAAGCTTGTGTCACATTACCA-CTCGGCATGTGCAGGCTGTTTGTTTCGGGATGTAGGTAGAATCACCTAAAGAGAGCTGTGA-GCTGAGTAAACATGAACGAGGCAATCGGGAGGGTTGGGGAGTCGCTTCATGCCTCTCCA-TGAGGGGAACCCA-TAGAGTAGTTTTTCTTGCCTTTTTTGTTTGCGACGTGGGGGGCGTGTGCAATTTTCTTTTATTCA-TTTGGTGTGTAAAAGTAACTTTGAAATGTCACCGGCGATGGGAATTCAGGACCTTCATGCGGTATACAGTAAGTTTATTTGTTGATTAATGAGGTGTGGTGGTGCCAGACTAGGCTGCTCCACCTGCGCTGTAACTTTGTAAATGTACTGATTACTATATAAAGTTTATGTTTCTGGAAAAAAAAAAAAAAAAAAAAAAGA]
[+] EMBL AK072816 [GGTTGTGAAGGAGAATGAGGTGTTCAATGAATGTAACTGGAAGGGCAAAGACAATGCACTTGGTGATATGATGAGCTGGCTCGAGTGGATCCTGTCGCAGACACTTCTACGGATAGCGGAGTCCAACCCGCAAGGAATGGATGACTTCTGGCTGCAGCAGGGCGCAGATATGCTGCTGAGTTTGGTGAAGAGCTCTCAGGAGGATGTACAGGAGCGTGCAGCTACCACACTTGCTACGTTTGTGGTTATTGATGACGAGAGCGCGAATGTGGATGCTGCAAGATCAGAGGCAGTGATGCGTGTTGGGGGCATTCCAATGCTACTGGACCTTGCAAGGTGTTCAAGGGAGAGTGCACAGTCAGAAGCAGCAAAGGCTATTGCCAACTTATCGGTGAATGCCAAGGTTGCAAAGGCAGTTGCAGACGAGGGAGGTATCACAATACTAACCAATTTGGCCAGGTCAATGAATCGGCTTGTTGCTGAAGAAGCTGCTGGTGGCCTTTGGAATCTCTCCGTGGGTGAGGAGCACAAGGCAGCCATTGCAGCAGCTGGTGGTATAAAGGCTTTGGTCGATCTCATACTCCGCTGGCCTGCTGGGACTGATGGAGTTCTTGAACGTGCTGCTGGGGCACTTGCAAACCTAGCTGCTGATGACAAGTGTAGCATGGAAGTTGCAAAGGCTGGTGGTGTCCATGCTTTGGTCATGCTTGCTCGATCATGTAAACTTGAGGGTGTCCTAGAACAGGCTGCAAGGGCATTAGCTAACTTAGCCGCACATGGAGATAACAACAATAATAATGCCGCTGTGGGTCAGGAAGCAGGGGCTCTTGAGGCATTAGTGCAGCTAACAAGCTCTCAAAATGAGGGTGTAAGACAAGAAGCTGCTGGTGCTCTGTGGAATCTGTCATTTGATGATAGAAACCGTGAAGGCATTGCTGCTGCGGGTGGCGTTGAAGCTTTGGTTTCACTTGCACAAGAATGTTTGAATGCTTCGGAAGGCCTTCAGGAGAGAGCTGCTGGCGCATTATGGGGACTATCTGTTTCAGAAGCTAACAGTATGGCAATTGGACAGGAGGGTGGTGTCGCACCTTTGCTCACACTGGCACAATCAGATGTTGAAGATGTTCACGAGACAGCTGCAGGGGCACTATGGAATCTTGCTTTCTATTCTGGTAATGCTCTCTGTATTGTTGAAGAAGGTGGGGTTCCTATTCTAGTGCGGCTTTGCTCATCATCAGGGTCAAAAATGGCACGTTTCATGTCTGCGCTAGCCCTTGCTTATATGTTCGATGGAAGAATGGATGAGGTTGCATTGGTTGGGACGTCATCAGAGGGCAGTTCCAAGAGTGTTAATGTTGAGGGAGCTAGGAGAATGGCTTTGAAGCATATACAGACTTTTGTTCTGACATTTTCGGACCCACAAGTTTTCACTACGGCTTCCACCTCCTCAGCCTCAGCAGCACTATCTCAGATTGCTGATGCAGTGTTTATACAAGAAGCTGGACACCTGAGATGCAGTGGTGCCGAGATCGCTAGATTTGTTGCCATGCTCCGGAATCCTGCATCAATTCTTCGCGCTTGTGCTGCCTTTGCCCTTCTTCAGTTCACAATCCCTGGAGGTCGGCACGCAGTGCACCATGCGGGTCTCCTGCAGAAAGCAGGGGCAGCTCGAGTCTTGCGCGCAGCAGCAGCAGCCACGACCGCTTCTATCGAAG CCAAAGTCTTTGCAAGAATTGTCCTCAGAAATTTGGAACACCATCAGACAGGGACTTCAACATGAAAGCACAGCAGTGGAGCTTATGCTAATCTTCCAACAAGGCATTTCTTCAGCAGCCTTCTCAGCCTGTTCAAAACATCGCAAAATTGCG GCC CA AG GTAATGTTT TGGCTTTCAAAGCTTGTGTCACATTACCA CTCGGCATGTGCAGGCTGTTTGTTTCGGGATGTAGGTAGAATCACCTAAAGAGAGCTGTGA GCTGAGTAAACATGAACGAGGCAATCGGGAGGGTTGGGGAGTCGCTTCATGCCTCTCCA TGAGGGGAACCCA TAGAGTAGTTTTTCTTGCCTTTTTTGTTTGCGACGTGGGGGGCGTGTGCAATTTTCTTTTATTCA TTTGGTGTGTAAAAGTAACTTTGAAATGTCACCGGCGATGGGAATTCAGGACCTTCATGCGGTATACAGTAAGTTTATTTGTTGATTAATGAGGTGTGGTGGTGCCAGACTAGGCTGCTCCACCTGCGCTGTAACTTTGTAAATGTACTGATTACTATATAAAGTT ]
[+] EMBL CB647140 [ GGTGTTCAATGAATGTAACTGGAAGGGCAAAGACAATGCACTTGGTGATATGATGAGCTGGCTCGAGTGGATCCTGTCGCAGACACTTCTACGGATAGCGGAGTCCAACCCGCAAGGAATGGATGACTTCTGGCTGCAGCAGGGCGCAGATATGCTGCTGAGTTTGGTGAAGAGCTCTCAGGAGGATGTACAGGAGCGTGCAGCTACCACACTTGCTACGTTTGTGGTTATTGATGACGAGAGCGCGAATGTGGATGCTGCAAGATCAGAGGCAGTGATGCGTGTTGGGGGCATTCCAATGCTACTGGACCTTGCAAGGTGTTCAAGGGAGAGTGCACAGTCAGAAGCAGCAAAGGCTATTGCCAACTTATCGGTGAATGCCAAGGTTGCAAAGGCAGTTGCAGACGAGGGAGGTATCACAATACTAACCAATTTGGCCAGGTCAATGAATCGGCTTGTTGCTGAAGAAGCTGCTGGTGGCCTTTGGAATCTCTCCGTGGGTGAGGAGCACAAGGCAGCCATTGCAGCAGCTGGTGGTATAAAGGCTTTGGTCGATCTCATACTCCGCTGGCCTGCTGGGACTGATGGAGTTCTTGAACGTGCTGCTGGGGCACTTGCAAACCTAGCTGCTGATGACAAGTGTAGCATGGAAGTTGCAAAGGCTGGTGGTGTCCATGCTTTGGTCATGCTTGCTCGATCATGTAAACTTG ]
[+] EMBL CB640388 [ GCTATTGAGTTTGGTGAAGAGCTCTCAGGAGGATGTACAGGAGCGTGCAGCTACCACACTTGCTACGTTTGTGGTTATTGATGACGAGAGCGCGAATGTGGATGCTGCAAGATCAGAGGCAGTGATGCGTGTTGGGGGCATTCCAATGCTACTGGACCTTGCAAGGTGTTCAAGGGAGAGTGCACAGTCAGAAGCAGCAAAGGCTATTGCCAACTTATCGGTGAATGCCAAGGTTGCAAAGGCAGTTGCAGACGAGGGAGGTATCACAATACTAACCAATTTGGCCAGGTCAATGAATCGGCTTGTTGCTGAAGAAGCTGCTGGTGGCCTTTGGAATCTCTCCGTGGGTGAGGAGCACAAGGCAGCCATTGCAGCAGCTGGTGGTATAAAGGCTTTGGTCGATCTCATATTCCGCTGGCCTGCTGGGACTGATGGAGTTCTTGAACGTGCTGCTGGGGCACTTGCAAACCTAGCTGCTGATGACAAGTGTAGCATGGAAGTTGCAAAGGCTGGTGGTGTCCATGCTTTGGTCATGCTTGC ]
[+] EMBL CB632773 [ GCTACCACACTTGCTACGTTTGTGGTTATTGATGACGAGAGCGCGAATGTGGATGCTGCAAGATCAGAGGCAGTGATGCGTGTTGGGGGCATTCCAATGCTACTGGACCTTGCAAGGTGTTCAAGGGAGAGTGCACAGTCAGAAGCAGCAAAGGCTATTGCCAACTTATCGGTGAATGCCAAGGTTGCAAAGGCAGTTGCAGACGAGGGAGGTATCACAATACTAACCAATTTGGCCAGGTCAATGAATCGGCTTGTTGCTGAAGAAGCTGCTGGTGGCCTTTGGAATCTCTCCGTGGGTGAGGAGCACAAGGCAGCCATTGCAGCAGCTGGTGGTATAAAGGCTTTGGTCGATCTCATACTCCGCTGGCCTGCTGGGACTGATGGAGTTCTTGAACGTGCTGCTGGGGCACTTGCAAACCTAGCTGCTGATGACAAGTGTAGCATGGAAGTTGCAAAGGCTGGTGGTGTCCATGCTTTGGTCATGCTTGCTCGATCATGTAAACTTGAGGGTGTCCTAGAACAGGCTGCAAGGGCATTAGCTAACTTAGCCGCACATGGAGATAACAACAATAATAATGCCGCTGTGGGTCAGGAAGCAGGGGCTCTTGAGGCATTAGTGCAGCTAACAAGCTCTCAAAATGAGGGTGTAAGACAAGAAGCTGCTGGTGCTCTGTGGAATCTGTCATTTGATGATAGAAACCGTGAAGGCATTGCTGCTGCGGGTGGCGTTGAAGCTTTGGTTTCACTTGCACAAGAATGTTTGAATGCTTCGGAAGGCCTTCANGAGAGAGCTGCTGGCGCATTATGGGGACTATCTGTTTCAGAAGCTAACAG ]
[-] EMBL CB657577 [ TTATACAAGAAGCTGGACACNTGAGATGCAGTGGTGCCGAGATCGCTAGATTTGTTGCCATGCTCCGGAATCCTGCATCAATTCTTCGCGCTTGTGCTGCCTTTGCCCTTCTTCAGTTCACAATCCCTGGAGGTCGGCACGCAGTGCACCATGCGGGTCTCCTGCAGAAAGCAGGGGCAGCTCGAGTCTTGCGCGCAGCAGCAGCAGCCACGACCGCTTCTATCGAAG CCAAAGTCTTTGCAAGAATTGTCCTCAGAAATTTGGAACACCATCAGACAGGGACTTCAACATGAAAGCACAGCAGTGGAGCTTATGCTAATCTTCCAACAAGGCATTTCTTCAGCAGCCTTCTCAGCCTGTTCAAAACATCGCAAAATTGCG GCC CA AG GTAATGTTT TGGCTTTCAAAGCTTGTGTCACATTACCA CTCGGCATGTGCAGGCTGTTTGTTTCGGGATGTAGGTAGAATCACCTAAAGAGAGCTGTGA GCTGAGTAAACATGAACGAGGCAATCGGGAGGGTTGGGGAGTCGCTTCATGCCTCTCCA TGAGGGGAACCCA TAGAGTAGTTTTTCTTGCCTTTTTTGTTTGCGACGTGGGGGGCGTGTGCAATTTTCTTTTATTCA TTTGGTGTGTAAAAGTAACTTTGAAATGTCACCGGCGATGGGAATTCAGGACCTTCATGCGGTATACAGTAAGTTTATTTGTTGATTAATGAGGTGTGGTGGTGCCAGACTAGGCTGCTCCACCTGCGCTGTAACTTTGTAAATGTACTGATTACTATATAAAGTTT ]
[-] EMBL CB632774 [ ATTCTTCGCGCTTGTGCTGCCTTTGCCCTTCTTCAGTTCACAATCCCTGGAGGTCGGCACGCAGTGCACCATGCGGGTTTCCTGCAGAAAGCAGGGGCAGCTTGAGTTTTGCGGGCAGCAGCAGCAGCCACGACCGCTTTTATTGAAG CCAAAGTTTTTGCAAGAATTGTCCTCAGAAATTTGGAACACCATCAGACAGGGACTTCAACATGAAAGCCCAGCAGTGGAGCTTATGCTAATCATCCAACAAGGCATTTTTTCAGCAGCCTTTTCAGCCTGTTCAAAACATCGCAAAATTGCG GCC CA AG GTAATGTTT TGGCTTTCAAAGCTTGTGTCACATTACCC CTCGGCATGTGCAGGCTGTTTGTTTCGGGATGTAGGTAGAATCCCCTAAAGAGAGCTGTGA GCTGAGTAAACATGAACGAGGCAATCGGGAGGGTTGGGGAGTCGCTTCATGCCTTTCCA TGAGGGGAACCCA TAGAGTAGTTTTTTTTGCCTTTTTTGTTTGCGACGTGGGGGGGGTGTGCAATTTTTTTTTATTCA TTTGGGGTGTAAAAGTAACTTTGAAATGTCCCCGGCGATGGGAATTCAGGCCCTTCATGCGGTATACAGTAAGTTTATTTGTTGATTAATGAGGTGTGGTGGTGCCAGACTAGGCTGCTCCCCCTGCGCTGTAACTTTGTAAATGTACTGATTACTATATAAAGTTTA ]
[-] EMBL CB647141 [ TCCCTGGAGGTCGGCACGCAGTGCACCATGCGGGTCTCCTGCAGAAAGCAGGGGCAGCTTGAGTTTTGCGCGCAGCAGCAGCAGCCACGACCGCTTTTATTGAAG CCAAAGTCTTTGCAAGAATTGTCCTCAGAAATTTGGAACACCATCAGACAGGGACTTCAACATGAAAGCACAGCAGTGGAGCTTATGCTAATTTTCCAACAAGGCATTTTTTCAGCAGCCTTTTCAGCCTGTTCAAAACATCGCAAAATTGCG GCC CA AG GTAATGTTT TGGCTTTCAAAGCTTGTGTCACATTACCA CTCGGCATGTGCAGGCTGTTTGTTTCGGGATGTAGGTAGAATCCCCTAAAGAGAGCTGTGA GCTGAGTAAACATGAACGAGGCAATCGGGAGGGTTGGGGAGTCGCTTCATGCCTCTCCA TGAGGGGAACCCA TAGAGTAGTTTTTTTTGCCTTTTTTGTTTGCGACGTGGGGGGCGTGTGCAATTTTTTTTTATTCA TTTGGTGTGTAAAAGTAACTTTGAAATGTCACCGGCGATGGGAATTCAGGACCTTCATGCGGTATACAGTAAGTTTATTTGTTGATTAATGAGGTGTGGTGGTGCCAGACTAGGCTGCTCCACCTGCGCTGTAACTTTGTAAATGTACTGATTACTATATAAAGTTTATGTTTTTGGAAAAAAAAAAAAAAAAAAAAAAGA]
[+] EMBL AU092069 [ cCGGACCCCAGTGCACCATGCGGGTCTCTTGCAGAAAGCAGGGGCAGCTCGAGTCTTGCGCGCAGCAGCAGCAGCCACGACCGCTTCTATCGAAGCCCAAAGTCTTTGCAAGAATTGTCCTCAGAAATTTGGAACACCATCAGACAGGGACTTCAACATGAAAGCACAGCAGTGGAGCTTATGCTAATCTTCCAACAAGGCATTTCTTCAGCAGCCTTCTCAGCCTGTTCAAAACATCGCAAAATTGCG GCC CA AG GTAATGTTT TGGCTTTCAAAGCTTGTGTCACATTACCA CTCGGCATGTNCAGGCTGTTTGTTNCGGGATGTAGGTAGAATCNCCTAAAGAGAGCTNTGA GCTGAGTAAACATGAACGAGGCAATCGGGAGGGTTGGGGAGTCGCTTCATGCCTCTCCA TGAGGGGANCCCA TAGAGTAGTTTTTCTTGCCTTTTTTGTTTGCGACGTGGGGGGCGTGTGCAATTTTCTTTTATTCA TTTGGTGTGTAAAAGTAACTTTGAAATGTCACCGGCGATGGGAATTCAGGACCTTCATGCGGTATACAGTAAGTTTATTTGTTGATTAATGAGGTGTGGTGGTGCCAGACTAGGCTGCTCCACCTGCGCTGTAACTTTGTAAATGTACTGATTACTATATAAAGTTTATGTTTCTGGAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL BM038522 [ ACACCATCAGACA GGACTTCAACATGAAAGCACA CAGTGGAGCTTATGCTAATCTTCCAACAAGGCATTTCTTCAGCA CCTTCTCAGCCTGTTCCAAACATCGCNAAATTGCG GCCACA AG GTAATGTTT TGGCTTTCAAAGCTTGTGTCACATTACCA CTCGGCATGTGCAGGCTGTTTGTTTCGGGATGTAGGTAGAATCACCTAAAGAGAGCTGTGA GCTGAGTAAACATGAACGAGGCCATCGGGAGGGTTGGGGAGTCGCTTCATGCCTCTCCACTGAGGGGAACCCACTAGAGTAGTTTTTCTTGCCTTTTTTGTTTGCGACGTGGGGGGCGTGTGCAATTTTCTTTTATTCACTTTGGTGTGTAAAAGTAACTTTGAAATGTCACCGGCGATGGGAATTCAGGACCTTCATGCGGTATACAGTAAGTTTATTTGTTGATTAATGAGGTGTGGTGGTGCCAGACTAGGCTGCTCCACCTGCGCTGTAACTTTGTAAATGTACTGATTACTATATAAAGTTTATGTTTCTGGAAAAAAAAA ]
[+] EMBL BI811029 [ ACAA GCATTTCTTCA CA CCTTCTCA CCTGTTCCAAACATCGCAAAATTGCG GCC CACAG GTAATGTTT TGGCTTTCAAAGCTTGTGTCACATTACCACCTCGGCATGT CA GCTGTTT TTTCGGGATGTAGGTAGAATCACCTAAAGAGAGCTGTGAGGCTGAGTAAACATGAACGAGGCCATCGGGA GGTTGGGGA TCGCTTCATGCCTCTCCA TGAGGGGAACCCA TAGAGTA TTTTTCTT CCTTTTTTGTTTGCGAC TGGGGGGCGTGT CAATTTTCTTTTATTCA TTTGGTGTGTAAAAGTAACTTTGAAATGTCACCGGCGATGGGAATTCAGGACCTTCATGCGGTATACAGTAAGTTTATTTGTTGATTAATGAGGTGTGGTGGTGCCAGACTAGGCTGCTCCACCTGCGCTGTAACTTTGTAAATGTACTGATTACTATATAAAGTTTATGTTTCTGGAAAAAAAAAA ]
[+] EMBL CB666546 [ GCGAGCC CA AGTGTAATGTTTCTGGCTTTCAAAGCTTGTGTCACATTACCA CTCGGCATGTGCAGGCTGTTTGTTTCGGGATGTAGGTAGAATCACCTAAAGAGAGCTGTGA GCTGAGTAAACATGAACGAGGCAATCGGGAGGGTTGGGGAGTCGCTTCATGCCTCTCCA TGAGGGGAACCCA TAGAGTAGTTTTTCTTGCCTTTTTTGTTTGCGACGTGGGGGGCGTGTGCAATTTTCTTTTATTCA TTTGGTGTGTAAAAGTAACTTTGAAATGTCACCGGCGATGGGAATTCAGGACCTTCATGCGGTATACAGTAAGTTTATTTGTTGATTAATGAGGTGTGGTGGTGCCAGACTAGGCTGCTCCACCTGCGCTGTAACTTTGTAAATGTACTGATTACTATATAAAGTTT ]
consensusID : consensus_13446#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence
[CTTTCATATTTTAGGTTTCACTTGCACAAGAATGTTTGAATGCTTCGGAAGGCCTTCAGGAGAGAGCTGCTGGCGCATTATGGGGACTATCTGTTTCAGAAGCTAACAGTATGGCAATTGGACAGGAGGGTGGTGTCGCACCTTTGCTCACACTGGCACAATCAGATGTTGAAGATGTTCACGAGACAGCTGCAGGGGCACTATGGAATCTTGCTTTCTATTCTGGTAATGCTCTCCGTATTGTTGAAGAAGGTGGGGTTCCTATTCTAGTGCGGCTTTGCTCATCATCAGGGTCAAAAATGGCACGTTTCATGTCTGCGCTAGCCCTTGCTTATATGTTCGATGGAAGAATGGATGAGGTTGCATTGGTTGGGACGTCATCAGAGGGCAGTTCCAAGAGTGTTAATGTTGAGGGAGCTAGGAGAATGGCTTTGAAAGCATATACAGACTTTTGTTCTGACATTTTCGGACCCACAAGTTTTCACTACGGCTTCCACCTCCTCAGCCTCAGCAGCACTATCTCAGATTGCTGATGCAGTGTTTATACAAGAAGCTGGACACCTGAGATGCAGTGGTGCCGAGATCGCTAGATTTGTTGCCATGCTCCGGAATCCTGCATCAATTCTTCGCGCTTGTGCTGCCTTTG]
[+] EMBL CA758883 [CTTTCATATTTTAGGTTTCACTTGCACAAGAATGTTTGAATGCTTCGGAAGGCCTTCAGGAGAGAGCTGCTGGCGCATTATGGGGACTATCTGTTTCAGAAGCTAACAGTATGGCAATTGGACAGGAGGGTGGTGTCGCACCTTTGCTCACACTGGCACAATCAGATGTTGAAGATGTTCACGAGACAGCTGCAGGGGCACTATGGAATCTTGCTTTCTATTCTGGTAATGCTCTCCGTATTGTTGAAGAAGGTGGGGTTCCTATTCTAGTGCGGCTTTGCTCATCATCAGGGTCAAAAATGGCACGTTTCATGTCTGCGCTAGCCCTTGCTTATATGTTCGATGGAAGAATGGATGAGGTTGCATTGGTTGGGACGTCATCAGAGGGCAGTTCCAAGAGTGTTAATGTTGAGGGAGCTAGGAGAATGGCTTTGAAAGCATATACAGACTTTTGTTCTGACATTTTCGGACCCACAAGTTTTCACTACGGCTTCCACCTCCTCAGCCTCAGCAGCACTATCTCAGATTGCTGATGCAGTGTTTATACAAGAAGCTGGACACCTGAGATGCAGTGGTGCCGAGATCGCTAGATTTGTTGCCATGCTCCGGAATCCTGCATCAATTCTTCGCGCTTGTGCTGCCTTTG]
consensusID : consensus_13446#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 281 fasta sequence
[GGCATTGACAGTTACTGTAGATTGTTATATCTATCGTTGGGAATAAATGTTTTATCTGTCATTGGGAATGAATGCTATTCCTTACTCTAGATATGACGACTTTCTGTTTATTCAGGATGTTCACGAGACAGCTGCAGGGGCACTATGGAATCTTGCTTTCTATTCTGGTAATGCTCTCTGTATTGTTGAAGAAGGTGGGGTTCCTATTCTAGTGCGGCTTTGCTCATCATCAGGGTCAAAAATGGCACGTTTCATGTCTGCGCTANCCTTGCTTATATGTT]
[+] EMBL OSC103901 [GGCATTGACAGTTACTGTAGATTGTTATATCTATCGTTGGGAATAAATGTTTTATCTGTCATTGGGAATGAATGCTATTCCTTACTCTAGATATGACGACTTTCTGTTTATTCAGGATGTTCACGAGACAGCTGCAGGGGCACTATGGAATCTTGCTTTCTATTCTGGTAATGCTCTCTGTATTGTTGAAGAAGGTGGGGTTCCTATTCTAGTGCGGCTTTGCTCATCATCAGGGTCAAAAATGGCACGTTTCATGTCTGCGCTANCCTTGCTTATATGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13446#0 GGTTGTGAAGGAGAATGAGGTGTTCAATGAATGTAACTGGAAGGGCAAAGACAATGCACT 60
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TGGTGATATGATGAGCTGGCTCGAGTGGATCCTGTCGCAGACACTTCTACGGATAGCGGA 120
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 GTCCAACCCGCAAGGAATGGATGACTTCTGGCTGCAGCAGGGCGCAGATATGCTGCTGAG 180
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TTTGGTGAAGAGCTCTCAGGAGGATGTACAGGAGCGTGCAGCTACCACACTTGCTACGTT 240
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TGTGGTTATTGATGACGAGAGCGCGAATGTGGATGCTGCAAGATCAGAGGCAGTGATGCG 300
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TGTTGGGGGCATTCCAATGCTACTGGACCTTGCAAGGTGTTCAAGGGAGAGTGCACAGTC 360
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 AGAAGCAGCAAAGGCTATTGCCAACTTATCGGTGAATGCCAAGGTTGCAAAGGCAGTTGC 420
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 AGACGAGGGAGGTATCACAATACTAACCAATTTGGCCAGGTCAATGAATCGGCTTGTTGC 480
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TGAAGAAGCTGCTGGTGGCCTTTGGAATCTCTCCGTGGGTGAGGAGCACAAGGCAGCCAT 540
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TGCAGCAGCTGGTGGTATAAAGGCTTTGGTCGATCTCATACTCCGCTGGCCTGCTGGGAC 600
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TGATGGAGTTCTTGAACGTGCTGCTGGGGCACTTGCAAACCTAGCTGCTGATGACAAGTG 660
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TAGCATGGAAGTTGCAAAGGCTGGTGGTGTCCATGCTTTGGTCATGCTTGCTCGATCATG 720
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TAAACTTGAGGGTGTCCTAGAACAGGCTGCAAGGGCATTAGCTAACTTAGCCGCACATGG 780
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 AGATAACAACAATAATAATGCCGCTGTGGGTCAGGAAGCAGGGGCTCTTGAGGCATTAGT 840
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 GCAGCTAACAAGCTCTCAAAATGAGGGTGTAAGACAAGAAGCTGCTGGTGCTCTGTGGAA 900
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TCTGTCATTTGATGATAGAAACCGTGAAGGCATTGCTGCTGCGGGTGGCGTTGAAGCTTT 960
consensus_13446#1 ------------------------------------------------CTTTCATATTTT 12
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 -GGTTTCACTTGCACAAGAATGTTTGAATGCTTCGGAAGGCCTTCAGGAGAGAGCTGCTG 1019
consensus_13446#1 AGGTTTCACTTGCACAAGAATGTTTGAATGCTTCGGAAGGCCTTCAGGAGAGAGCTGCTG 72
consensus_13446#2 --------------------------------------GGCATT-----GACAGTTACTG 17
*** ** ** ** * ***
consensus_13446#0 GCGCATTATGGGGACTATCTGTTTCAGAAGCTAACAGTATGGCAATTGGACAGGAGGGTG 1079
consensus_13446#1 GCGCATTATGGGGACTATCTGTTTCAGAAGCTAACAGTATGGCAATTGGACAGGAGGGTG 132
consensus_13446#2 -TAGATTGTTATATCTATCGTTGGGAATAAATGTTTTATCTGTCATTGGGAATGAATGCT 76
*** * ***** * * * * * ***** * ** *
consensus_13446#0 GTGTCGCACCTTTGCTCACACTGGCACAATCAGATGTTGAAGATGTTCACGAGACAGCTG 1139
consensus_13446#1 GTGTCGCACCTTTGCTCACACTGGCACAATCAGATGTTGAAGATGTTCACGAGACAGCTG 192
consensus_13446#2 ATTCCTTACTCTAGAT-ATGACGAC-TTTCTGTTTATTCAGGATGTTCACGAGACAGCTG 134
* * ** * * * * * * * ** * *******************
consensus_13446#0 CAGGGGCACTATGGAATCTTGCTTTCTATTCTGGTAATGCTCTCTGTATTGTTGAAGAAG 1199
consensus_13446#1 CAGGGGCACTATGGAATCTTGCTTTCTATTCTGGTAATGCTCTCCGTATTGTTGAAGAAG 252
consensus_13446#2 CAGGGGCACTATGGAATCTTGCTTTCTATTCTGGTAATGCTCTCTGTATTGTTGAAGAAG 194
******************************************** ***************
consensus_13446#0 GTGGGGTTCCTATTCTAGTGCGGCTTTGCTCATCATCAGGGTCAAAAATGGCACGTTTCA 1259
consensus_13446#1 GTGGGGTTCCTATTCTAGTGCGGCTTTGCTCATCATCAGGGTCAAAAATGGCACGTTTCA 312
consensus_13446#2 GTGGGGTTCCTATTCTAGTGCGGCTTTGCTCATCATCAGGGTCAAAAATGGCACGTTTCA 254
************************************************************
consensus_13446#0 TGTCTGCGCTAGCCCTTGCTTATATGTTCGATGGAAGAATGGATGAGGTTGCATTGGTTG 1319
consensus_13446#1 TGTCTGCGCTAGCCCTTGCTTATATGTTCGATGGAAGAATGGATGAGGTTGCATTGGTTG 372
consensus_13446#2 TGTCTGCGCTANCC-TTGCTTATATGTT-------------------------------- 281
*********** ** *************
consensus_13446#0 GGACGTCATCAGAGGGCAGTTCCAAGAGTGTTAATGTTGAGGGAGCTAGGAGAATGGCTT 1379
consensus_13446#1 GGACGTCATCAGAGGGCAGTTCCAAGAGTGTTAATGTTGAGGGAGCTAGGAGAATGGCTT 432
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TGAA-GCATATACAGACTTTTGTTCTGACATTTTCGGACCCACAAGTTTTCACTACGGCT 1438
consensus_13446#1 TGAAAGCATATACAGACTTTTGTTCTGACATTTTCGGACCCACAAGTTTTCACTACGGCT 492
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TCCACCTCCTCAGCCTCAGCAGCACTATCTCAGATTGCTGATGCAGTGTTTATACAAGAA 1498
consensus_13446#1 TCCACCTCCTCAGCCTCAGCAGCACTATCTCAGATTGCTGATGCAGTGTTTATACAAGAA 552
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 GCTGGACACCTGAGATGCAGTGGTGCCGAGATCGCTAGATTTGTTGCCATGCTCCGGAAT 1558
consensus_13446#1 GCTGGACACCTGAGATGCAGTGGTGCCGAGATCGCTAGATTTGTTGCCATGCTCCGGAAT 612
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 CCTGCATCAATTCTTCGCGCTTGTGCTGCCTTTGCCCTTCTTCAGTTCACAATCCCTGGA 1618
consensus_13446#1 CCTGCATCAATTCTTCGCGCTTGTGCTGCCTTTG-------------------------- 646
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 GGTCGGCACGCAGTGCACCATGCGGGTCTCCTGCAGAAAGCAGGGGCAGCTCGAGTCTTG 1678
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 CGCGCAGCAGCAGCAGCCACGACCGCTTCTATCGAAGCCAAAGTCTTTGCAAGAATTGTC 1738
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 CTCAGAAATTTGGAACACCATCAGACAGGGACTTCAACATGAAAGCACAGCAGTGGAGCT 1798
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TATGCTAATCTTCCAACAAGGCATTTCTTCAGCAGCCTTCTCAGCCTGTTCAAAACATCG 1858
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 CAAAATTGCGGCCCAAGGTAATGTTTTGGCTTTCAAAGCTTGTGTCACATTACCACTCGG 1918
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 CATGTGCAGGCTGTTTGTTTCGGGATGTAGGTAGAATCACCTAAAGAGAGCTGTGAGCTG 1978
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 AGTAAACATGAACGAGGCAATCGGGAGGGTTGGGGAGTCGCTTCATGCCTCTCCATGAGG 2038
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 GGAACCCATAGAGTAGTTTTTCTTGCCTTTTTTGTTTGCGACGTGGGGGGCGTGTGCAAT 2098
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 TTTCTTTTATTCATTTGGTGTGTAAAAGTAACTTTGAAATGTCACCGGCGATGGGAATTC 2158
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 AGGACCTTCATGCGGTATACAGTAAGTTTATTTGTTGATTAATGAGGTGTGGTGGTGCCA 2218
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 GACTAGGCTGCTCCACCTGCGCTGTAACTTTGTAAATGTACTGATTACTATATAAAGTTT 2278
consensus_13446#1 ------------------------------------------------------------
consensus_13446#2 ------------------------------------------------------------
consensus_13446#0 ATGTTTCTGGAAAAAAAAAAAAAAAAAAAAAAGA 2312
consensus_13446#1 ----------------------------------
consensus_13446#2 ----------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||